ModelGenotype
For human data, we are using the GA4GH Variation Representation Specification (VRS). However, mouse data often use symbolic representations of variants that are not immediately computable, for instance.
{
"count": 1,
"komp_genotypes": [
{
"genesymbol": "Slc1a3",
"genotype_id": 1855703,
"genotypedescription": "Slc1a3<tm1.1(KOMP)Mbp> -/+",
"genotypesymbol": "-/+",
"jr": 18557,
"latest_pheno": "2013-04-05",
"strainstatus": "KOMP Complete"
}
]
}
Question -- should we also support HGVS-style variants with the VRS framework?