.. _rstsetup:

====================
Setting up HBA-DEALS
====================

HBA-DEALS is an R package that has been tested with R version 4.1. Source code can
be downloaded from the `HBA-DEALS GitHub page <https://github.com/TheJacksonLaboratory/HBA-DEALS>`_.

To install HBA-DEALS and its Prerequisites, run the following from the R console:


.. code-block:: R
   :caption: setting up HBA-DEALS

    install.packages('edgeR')
    install.packages('devtools')
    library(devtools)
    install_github('https://www.github.com/TheJacksonLaboratory/HBA-DEALS')

If any error messages are printed, make the required modifications and re-run the commands.