QTL Analysis - binary [ICI vs EOI]

workflowr

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• Checks
• Past versions

Last updated: 2022-04-08

Checks: 5 2

Knit directory: Serreze-T1D_Workflow/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

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R Markdown file: uncommitted changes

The R Markdown is untracked by Git. To know which version of the R Markdown file created these results, you’ll want to first commit it to the Git repo. If you’re still working on the analysis, you can ignore this warning. When you’re finished, you can run wflow_publish to commit the R Markdown file and build the HTML.

Environment: empty

Great job! The global environment was empty. Objects defined in the global environment can affect the analysis in your R Markdown file in unknown ways. For reproduciblity it’s best to always run the code in an empty environment.

Seed: set.seed(20220210)

The command set.seed(20220210) was run prior to running the code in the R Markdown file. Setting a seed ensures that any results that rely on randomness, e.g. subsampling or permutations, are reproducible.

Session information: recorded

Great job! Recording the operating system, R version, and package versions is critical for reproducibility.

Cache: none

Nice! There were no cached chunks for this analysis, so you can be confident that you successfully produced the results during this run.

File paths: absolute

Using absolute paths to the files within your workflowr project makes it difficult for you and others to run your code on a different machine. Change the absolute path(s) below to the suggested relative path(s) to make your code more reproducible.

absolute	relative
/Users/corneb/Documents/MyJax/CS/Projects/Serreze/qc/workflowr/Serreze-T1D_Workflow	.

Repository version: 2d6f369

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version 2d6f369. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

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    Untracked:  output/Proportion_matching_genotypes_before_removal_of_bad_samples_5.batches.pdf
    Untracked:  output/genotype_error_marker_5.batches.pdf
    Untracked:  output/genotype_frequency_marker_5.batches.pdf

Unstaged changes:
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici.vs.eoi_snpsqc_dis_no-x_updated.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici.vs.pbs_snpsqc_dis_no-x_updated.Rmd

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

---

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---

Loading Data

We will load the data and subset indivials out that are in the groups of interest. We will create a binary phenotype from this (EOI ==0, ICI == 1).

load("data/gm_allqc_5.batches.RData")

#gm_allqc
gm=gm_allqc
gm

Object of class cross2 (crosstype "bc")

Total individuals              308
No. genotyped individuals      308
No. phenotyped individuals     308
No. with both geno & pheno     308

No. phenotypes                   1
No. covariates                   6
No. phenotype covariates         0

No. chromosomes                 20
Total markers                34537

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2643 2629 1857 1890 1774 1941 1672 1627 1878 1176 1871 1300 1549 1578 1257  935 
  17   18   19    X 
 501  913 1014 4532 

#pr <- readRDS("data/serreze_probs_allqc.rds")
#pr <- readRDS("data/serreze_probs.rds")

##extracting animals with ici and eoi group status
miceinfo <- gm$covar[gm$covar$group == "EOI" | gm$covar$group == "ICI",]
table(miceinfo$group)

EOI ICI 
164 104 

mice.ids <- rownames(miceinfo)

gm <- gm[mice.ids]
gm

Object of class cross2 (crosstype "bc")

Total individuals              268
No. genotyped individuals      268
No. phenotyped individuals     268
No. with both geno & pheno     268

No. phenotypes                   1
No. covariates                   6
No. phenotype covariates         0

No. chromosomes                 20
Total markers                34537

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2643 2629 1857 1890 1774 1941 1672 1627 1878 1176 1871 1300 1549 1578 1257  935 
  17   18   19    X 
 501  913 1014 4532 

#pr.qc <- pr
#for (i in 1:20){pr.qc[[i]] = pr.qc[[i]][mice.ids,,]}

#bin_pheno <- NULL
#bin_pheno$EOI <- ifelse(gm$covar$group == "EOI", 1, 0)
#bin_pheno$ICI <- ifelse(gm$covar$group == "ICI", 1, 0)
#bin_pheno <- as.data.frame(bin_pheno)
#rownames(bin_pheno) <- rownames(gm$covar)

gm$covar$ICI.vs.EOI <- ifelse(gm$covar$group == "EOI", 0, 1)
gm.full <- gm

##removing problmetic marker

gm <- drop_markers(gm, "UNCHS013106")

##dropping monomorphic markers within the dataset

g <- do.call("cbind", gm$geno)
#g[1,1:ncol(g)]

gf_mar <- t(apply(g, 2, function(a) table(factor(a, 1:2))/sum(a != 0)))
#gn_mar <- t(apply(g, 2, function(a) table(factor(a, 1:2))))

gf_mar <- gf_mar[gf_mar[,2] != "NaN",]

count <- rowSums(gf_mar <=0.05)
low_freq_df <- merge(as.data.frame(gf_mar),as.data.frame(count), by="row.names",all=T)
low_freq_df[is.na(low_freq_df)] <- ''
low_freq_df <- low_freq_df[low_freq_df$count == 1,]
rownames(low_freq_df) <- low_freq_df$Row.names

low_freq <- find_markerpos(gm, rownames(low_freq_df))
low_freq$id <- rownames(low_freq)

nrow(low_freq)

[1] 8398

low_freq_bad <- merge(low_freq,low_freq_df, by="row.names",all=T)
names(low_freq_bad)[1] <- c("marker")

gf_mar <- gf_mar[gf_mar[,2] != "NaN",]
MAF <- apply(gf_mar, 1, function(x) min(x))
MAF <- as.data.frame(MAF)
MAF$index <- 1:nrow(gf_mar)
gf_mar_maf <- merge(gf_mar,as.data.frame(MAF), by="row.names")
gf_mar_maf <- gf_mar_maf[order(gf_mar_maf$index),]

gfmar <- NULL
gfmar$gfmar_mar_0 <- sum(gf_mar_maf$MAF==0)
gfmar$gfmar_mar_1 <- sum(gf_mar_maf$MAF< 0.01)
gfmar$gfmar_mar_5 <- sum(gf_mar_maf$MAF< 0.05)
gfmar$gfmar_mar_10 <- sum(gf_mar_maf$MAF< 0.10)
gfmar$gfmar_mar_15 <- sum(gf_mar_maf$MAF< 0.15)
gfmar$gfmar_mar_25 <- sum(gf_mar_maf$MAF< 0.25)
gfmar$gfmar_mar_50 <- sum(gf_mar_maf$MAF< 0.50)
gfmar$total_snps <- nrow(as.data.frame(gf_mar_maf))

gfmar <- t(as.data.frame(gfmar))
gfmar <- as.data.frame(gfmar)
gfmar$count <- gfmar$V1

gfmar[c(2)] %>%
  kable(escape = F,align = c("ccccccccc"),linesep ="\\hline") %>%
  kable_styling(full_width = F) %>%
  kable_styling("striped", full_width = F)  %>%
  row_spec(8 ,bold=T,color= "white",background = "black")

	count
gfmar_mar_0	3816
gfmar_mar_1	4123
gfmar_mar_5	8398
gfmar_mar_10	8545
gfmar_mar_15	8618
gfmar_mar_25	9021
gfmar_mar_50	33673
total_snps	34537

gm_qc <- drop_markers(gm, low_freq_bad$marker)
gm_qc <- drop_nullmarkers(gm_qc)
 
gm = gm_qc
gm

Object of class cross2 (crosstype "bc")

Total individuals              268
No. genotyped individuals      268
No. phenotyped individuals     268
No. with both geno & pheno     268

No. phenotypes                   1
No. covariates                   7
No. phenotype covariates         0

No. chromosomes                 20
Total markers                26139

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2336 2342 1589 1661 1535 1681 1450 1438 1654  947 1651 1107 1359 1396  945  728 
  17   18   19    X 
 303  747  903  367 

markers <- marker_names(gm)
gmapdf <- read.csv("/Users/corneb/Documents/MyJax/CS/Projects/Serreze/haplotype.reconstruction/output_5.batches/genetic_map.csv")
pmapdf <- read.csv("/Users/corneb/Documents/MyJax/CS/Projects/Serreze/haplotype.reconstruction/output_5.batches/physical_map.csv")
#mapdf <- merge(gmapdf,pmapdf, by=c("marker","chr"), all=T)
#rownames(mapdf) <- mapdf$marker
#mapdf <- mapdf[markers,]
#names(mapdf) <- c('marker','chr','gmapdf','pmapdf')
#mapdfnd <- mapdf[!duplicated(mapdf[c(2:3)]),]

pr.qc <- calc_genoprob(gm)

Genome-wide scan

For each of the phenotype analyzed, permutations were used for each model to obtain genome-wide LOD significance threshold for p < 0.01, p < 0.05, p < 0.10, respectively, separately for X and automsomes (A).

The table shows the estimated significance thresholds from permutation test.

We also looked at the kinship to see how correlated each sample is. Kinship values between pairs of samples range between 0 (no relationship) and 1.0 (completely identical). The darker the colour the more indentical the pairs are.

Xcovar <- get_x_covar(gm)
#addcovar = model.matrix(~Sex, data = covars)[,-1]

#K <- calc_kinship(pr.qc, type = "loco")
#heatmap(K[[1]])
#K.overall <- calc_kinship(pr.qc, type = "overall")
#heatmap(K.overall)
kinship <- calc_kinship(pr.qc)
heatmap(kinship)

#operm <- scan1perm(pr.qc, gm$covar$phenos, Xcovar=Xcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, addcovar = addcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, n_perm=2000)
operm <- scan1perm(pr.qc, gm$covar["ICI.vs.EOI"], model="binary", n_perm=10, perm_Xsp=TRUE, chr_lengths=chr_lengths(gm$gmap))

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))
names(summary_table) <- c("autosomes","X")
summary_table$significance.level <- rownames(summary_table)

rownames(summary_table) <- NULL

summary_table[c(3,1:2)] %>%
  kable(escape = F,align = c("ccc")) %>%
  kable_styling("striped", full_width = T) %>%
  column_spec(1, bold=TRUE)

significance.level	autosomes	X
0.01	2.963386	2.596328
0.05	2.878049	2.458217
0.1	2.771113	2.277614

The figures below show QTL maps for each phenotype

out <- scan1(pr.qc, gm$covar["ICI.vs.EOI"], Xcovar=Xcovar, model="binary")

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))

plot_lod<-function(out,map){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- 11 # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM] \n(using same scale as pbs  vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm, alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()
  }
}

plot_lod(out,gm$gmap)

LOD peaks

The table below shows QTL peaks associated with the phenotype. We use the 95% threshold from the permutations to find peaks.

Centimorgan (cM)

peaks <- find_peaks(out, gm$gmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)
peaks$marker <- find_marker(gm$gmap, chr=peaks$chr,pos=peaks$pos)
names(peaks)[2] <- c("phenotype")
peaks <- peaks[-1]

if(nrow(peaks) < 50){
rownames(peaks) <- NULL
print(kable(peaks, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

#plot only peak chromosomes

plot_lod_chr<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    
    ymx <- 11
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]\n(using same scale as pbs  vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

  }
}


for(i in unique(peaks$chr)){
#for (i in 1:nrow(peaks)){
  #plot_lod_chr(out,gm$gmap, peaks$chr[i])
  plot_lod_chr(out,gm$gmap, i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

phenotype	chr	pos	lod	ci_lo	ci_hi	marker
ICI.vs.EOI	3	18.749	10.537780	16.581	21.785	UNCHS008487
ICI.vs.EOI	4	73.315	3.634948	55.263	84.575	UNCHS013118
ICI.vs.EOI	10	38.425	3.521193	23.818	44.658	JAX00292927

Megabase (MB)

print("peaks in MB positions")

[1] “peaks in MB positions”

peaks_mba <- find_peaks(out, gm$pmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)
peaks_mba$marker <- find_marker(gm$pmap, chr=peaks_mba$chr,pos=peaks_mba$pos)
names(peaks_mba)[2] <- c("phenotype")
peaks_mba <- peaks_mba[-1]

if(nrow(peaks_mba) < 50){

#peaks_mbl <- list()
##corresponding info in Mb
#for(i in 1:nrow(peaks)){
#  #lodindex <- peaks$lodindex[i]
#  phenotype <- peaks$phenotype[i]
#  chr <- as.character(peaks$chr[i])
#  lod <- peaks$lod[i]
#  mark <- peaks$marker[i]
#  pos <- mapdf[mapdf$marker==mark,]$pmapdf
#  ci_lo <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_lo[i] & mapdfnd$chr == peaks$chr[i])]
#  ci_hi <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_hi[i] & mapdfnd$chr == peaks$chr[i])]
#  peaks_mb=as.data.frame(cbind(phenotype, chr, pos, lod, ci_lo, ci_hi, mark))
#  names(peaks_mb)[7] <- c("marker")
#  peaks_mbl[[i]] <- peaks_mb
#}
#peaks_mba2 <- do.call(rbind, peaks_mbl)
#peaks_mba2 <- as.data.frame(peaks_mba)
#peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")] <- sapply(peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")], as.numeric)

rownames(peaks_mba) <- NULL
print(kable(peaks_mba, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

plot_lod_chr_mb<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    ymx <- 11
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]\n(using same scale as pbs vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')


  }
}

for(i in unique(peaks_mba$chr)){
#for (i in 1:nrow(peaks_mba)){
  #plot_lod_chr_mb(out,gm$pmap, peaks_mba$chr[i])
  plot_lod_chr_mb(out,gm$pmap,i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks_mba)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

phenotype	chr	pos	lod	ci_lo	ci_hi	marker
ICI.vs.EOI	3	38.95539	10.537780	34.11194	50.71874	UNCHS008487
ICI.vs.EOI	4	141.01758	3.634948	118.94138	154.52483	UNCHS013118
ICI.vs.EOI	10	74.69315	3.521193	45.61181	89.16470	JAX00292927

QTL effects

For each peak LOD location we give a list of gene

Chromsome 3

query_variants <- create_variant_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/cc_variants.sqlite")
query_genes <- create_gene_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/mouse_genes_mgi.sqlite")

#if(nrow(peaks) < 50){
for (i in 1){
#for (i in 1:1){
  #Plot 1

  #marker = find_marker(gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i])
  #gp <- g[,marker]
  #gp[gp==1] <- "AA"
  #gp[gp==2] <- "AB"
  #gp[gp==0] <- NA
  #plot_pxg(gp, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  #title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ###dev.off()

  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], gm$covar[peaks$phenotype[i]])
  blup_sub <- scan1blup(pr_sub[,chr], gm$covar[peaks$phenotype[i]])

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.eoi_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM])")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM])")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM])")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.eoi_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))


}

chr	type	start	stop	strand	ID	Name	Dbxref	gene_id	mgi_type	description
3	gene	34.10427	34.68262	positive	MGI_C57BL6J_2444112	Sox2ot	NCBI_Gene:320478,ENSEMBL:ENSMUSG00000105265	MGI:2444112	lncRNA gene	SOX2 overlapping transcript (non-protein coding)
3	pseudogene	34.18331	34.18419	positive	MGI_C57BL6J_3647478	Gm5708	NCBI_Gene:435727,ENSEMBL:ENSMUSG00000105739	MGI:3647478	pseudogene	predicted gene 5708
3	gene	34.28133	34.35199	negative	MGI_C57BL6J_5621390	Gm38505	NCBI_Gene:102638008,ENSEMBL:ENSMUSG00000092196	MGI:5621390	lncRNA gene	predicted gene, 38505
3	gene	34.41544	34.41816	positive	MGI_C57BL6J_5593758	Gm34599	NCBI_Gene:102637903,ENSEMBL:ENSMUSG00000105577	MGI:5593758	lncRNA gene	predicted gene, 34599
3	gene	34.42737	34.43510	negative	MGI_C57BL6J_5141980	Gm20515	ENSEMBL:ENSMUSG00000092242	MGI:5141980	lncRNA gene	predicted gene 20515
3	gene	34.48143	34.48221	negative	MGI_C57BL6J_5579841	Gm29135	ENSEMBL:ENSMUSG00000099437	MGI:5579841	lncRNA gene	predicted gene 29135
3	gene	34.56034	34.56055	positive	MGI_C57BL6J_5530785	Gm27403	ENSEMBL:ENSMUSG00000098795	MGI:5530785	unclassified non-coding RNA gene	predicted gene, 27403
3	gene	34.56526	34.57220	negative	MGI_C57BL6J_5662832	Gm42695	ENSEMBL:ENSMUSG00000106525	MGI:5662832	lncRNA gene	predicted gene 42695
3	gene	34.59782	34.60488	negative	MGI_C57BL6J_5625090	Gm42205	NCBI_Gene:105247023,ENSEMBL:ENSMUSG00000105222	MGI:5625090	lncRNA gene	predicted gene, 42205
3	gene	34.63846	34.63854	positive	MGI_C57BL6J_3811407	Mir1897	miRBase:MI0008314,NCBI_Gene:100316679,ENSEMBL:ENSMUSG00000104797	MGI:3811407	miRNA gene	microRNA 1897
3	gene	34.64326	34.64610	positive	MGI_C57BL6J_5662829	Gm42692	ENSEMBL:ENSMUSG00000104901	MGI:5662829	unclassified gene	predicted gene 42692
3	gene	34.64999	34.65246	positive	MGI_C57BL6J_98364	Sox2	NCBI_Gene:20674,ENSEMBL:ENSMUSG00000074637	MGI:98364	protein coding gene	SRY (sex determining region Y)-box 2
3	gene	34.65318	34.65328	positive	MGI_C57BL6J_5530993	Gm27611	ENSEMBL:ENSMUSG00000098254	MGI:5530993	unclassified non-coding RNA gene	predicted gene, 27611
3	gene	34.66366	34.66429	negative	MGI_C57BL6J_5662830	Gm42693	ENSEMBL:ENSMUSG00000105284	MGI:5662830	unclassified gene	predicted gene 42693
3	gene	34.68263	34.68275	positive	MGI_C57BL6J_5663343	Gm43206	ENSEMBL:ENSMUSG00000105101	MGI:5663343	unclassified gene	predicted gene 43206
3	gene	34.68938	34.69292	positive	MGI_C57BL6J_5594100	Gm34941	NCBI_Gene:102638356	MGI:5594100	lncRNA gene	predicted gene, 34941
3	gene	34.69964	34.71666	negative	MGI_C57BL6J_3781322	Gm3143	NCBI_Gene:100041108,ENSEMBL:ENSMUSG00000105153	MGI:3781322	lncRNA gene	predicted gene 3143
3	gene	34.77208	34.78235	positive	MGI_C57BL6J_5621394	Gm38509	NCBI_Gene:102638436,ENSEMBL:ENSMUSG00000106519	MGI:5621394	lncRNA gene	predicted gene, 38509
3	gene	34.82656	34.87928	positive	MGI_C57BL6J_5434743	Gm21388	NCBI_Gene:100861998,ENSEMBL:ENSMUSG00000114832	MGI:5434743	lncRNA gene	predicted gene, 21388
3	gene	34.92254	34.92265	negative	MGI_C57BL6J_5531088	Mir6378	miRBase:MI0021909,NCBI_Gene:102466155,ENSEMBL:ENSMUSG00000098862	MGI:5531088	miRNA gene	microRNA 6378
3	gene	34.95023	34.95953	positive	MGI_C57BL6J_5594414	Gm35255	NCBI_Gene:102638771	MGI:5594414	lncRNA gene	predicted gene, 35255
3	gene	35.25646	35.27613	negative	MGI_C57BL6J_1923648	1700017M07Rik	NCBI_Gene:76398,ENSEMBL:ENSMUSG00000105651	MGI:1923648	lncRNA gene	RIKEN cDNA 1700017M07 gene
3	gene	35.31844	35.33011	positive	MGI_C57BL6J_5594584	Gm35425	NCBI_Gene:102639001	MGI:5594584	lncRNA gene	predicted gene, 35425
3	gene	35.32561	35.32570	positive	MGI_C57BL6J_5455219	Gm25442	ENSEMBL:ENSMUSG00000093499	MGI:5455219	miRNA gene	predicted gene, 25442
3	gene	35.33770	35.40595	negative	MGI_C57BL6J_5621397	Gm38512	NCBI_Gene:102638848	MGI:5621397	lncRNA gene	predicted gene, 38512
3	gene	35.41383	35.41400	positive	MGI_C57BL6J_5663215	Gm43078	ENSEMBL:ENSMUSG00000106512	MGI:5663215	unclassified gene	predicted gene 43078
3	pseudogene	35.53688	35.53780	negative	MGI_C57BL6J_3643628	Gm7733	NCBI_Gene:665655,ENSEMBL:ENSMUSG00000106496	MGI:3643628	pseudogene	predicted gene 7733
3	pseudogene	35.54589	35.54633	positive	MGI_C57BL6J_1347022	Ube2l3-ps1	ENSEMBL:ENSMUSG00000105040	MGI:1347022	pseudogene	ubiquitin-conjugating enzyme E2L 3, pseudogene 1
3	gene	35.59715	35.66616	negative	MGI_C57BL6J_3779620	Gm6639	NCBI_Gene:625963,ENSEMBL:ENSMUSG00000105662	MGI:3779620	lncRNA gene	predicted gene 6639
3	gene	35.73537	35.73548	positive	MGI_C57BL6J_5455473	Gm25696	ENSEMBL:ENSMUSG00000064834	MGI:5455473	snRNA gene	predicted gene, 25696
3	gene	35.75406	35.85628	positive	MGI_C57BL6J_1923545	Atp11b	NCBI_Gene:76295,ENSEMBL:ENSMUSG00000037400	MGI:1923545	protein coding gene	ATPase, class VI, type 11B
3	gene	35.84534	35.84590	positive	MGI_C57BL6J_5663340	Gm43203	ENSEMBL:ENSMUSG00000104897	MGI:5663340	unclassified gene	predicted gene 43203
3	gene	35.86162	35.86212	positive	MGI_C57BL6J_1915850	1110021P09Rik	NA	NA	unclassified gene	RIKEN cDNA 1110021P09 gene
3	pseudogene	35.86386	35.86507	positive	MGI_C57BL6J_3647088	Gm7741	NCBI_Gene:665667,ENSEMBL:ENSMUSG00000097713	MGI:3647088	pseudogene	predicted gene 7741
3	pseudogene	35.87565	35.88335	negative	MGI_C57BL6J_5295701	Gm20595	NCBI_Gene:100463514	MGI:5295701	pseudogene	predicted gene, 20595
3	gene	35.89211	35.93744	negative	MGI_C57BL6J_2150386	Dcun1d1	NCBI_Gene:114893,ENSEMBL:ENSMUSG00000027708	MGI:2150386	protein coding gene	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
3	gene	35.93304	35.99084	positive	MGI_C57BL6J_3802149	Gm15952	NCBI_Gene:102639351,ENSEMBL:ENSMUSG00000085655	MGI:3802149	lncRNA gene	predicted gene 15952
3	gene	35.95544	35.95626	negative	MGI_C57BL6J_1925753	8430422M14Rik	ENSEMBL:ENSMUSG00000105095	MGI:1925753	unclassified gene	RIKEN cDNA 8430422M14 gene
3	gene	35.95629	36.00068	negative	MGI_C57BL6J_1919289	Mccc1	NCBI_Gene:72039,ENSEMBL:ENSMUSG00000027709	MGI:1919289	protein coding gene	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
3	gene	35.96938	35.97203	negative	MGI_C57BL6J_5663217	Gm43080	ENSEMBL:ENSMUSG00000105556	MGI:5663217	unclassified gene	predicted gene 43080
3	pseudogene	35.97377	35.97409	positive	MGI_C57BL6J_3704213	B230207O21Rik	ENSEMBL:ENSMUSG00000106096	MGI:3704213	pseudogene	RIKEN cDNA B230207O21 gene
3	gene	35.99983	36.02511	positive	MGI_C57BL6J_3590669	Mccc1os	NCBI_Gene:654424,ENSEMBL:ENSMUSG00000086392	MGI:3590669	antisense lncRNA gene	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), opposite strand
3	gene	36.00724	36.05355	negative	MGI_C57BL6J_2681852	Ccdc144b	NCBI_Gene:241943,ENSEMBL:ENSMUSG00000047696	MGI:2681852	protein coding gene	coiled-coil domain containing 144B
3	gene	36.06598	36.09286	positive	MGI_C57BL6J_1914272	Acad9	NCBI_Gene:229211,ENSEMBL:ENSMUSG00000027710	MGI:1914272	protein coding gene	acyl-Coenzyme A dehydrogenase family, member 9
3	gene	36.08886	36.09145	positive	MGI_C57BL6J_5663216	Gm43079	ENSEMBL:ENSMUSG00000105055	MGI:5663216	lncRNA gene	predicted gene 43079
3	gene	36.09718	36.09914	positive	MGI_C57BL6J_5663342	Gm43205	ENSEMBL:ENSMUSG00000105419	MGI:5663342	unclassified gene	predicted gene 43205
3	gene	36.15102	36.17034	positive	MGI_C57BL6J_1098769	Zfp267	NCBI_Gene:241944,ENSEMBL:ENSMUSG00000033883	MGI:1098769	protein coding gene	zinc finger protein 267
3	gene	36.17942	36.22231	negative	MGI_C57BL6J_2677633	Qrfpr	NCBI_Gene:229214,ENSEMBL:ENSMUSG00000058400	MGI:2677633	protein coding gene	pyroglutamylated RFamide peptide receptor
3	gene	36.20329	36.20562	positive	MGI_C57BL6J_5663392	Gm43255	ENSEMBL:ENSMUSG00000104568	MGI:5663392	lncRNA gene	predicted gene 43255
3	pseudogene	36.21381	36.21476	negative	MGI_C57BL6J_5011078	Gm18893	NCBI_Gene:100417907,ENSEMBL:ENSMUSG00000106180	MGI:5011078	pseudogene	predicted gene, 18893
3	gene	36.27233	36.27896	negative	MGI_C57BL6J_5625093	Gm42208	NCBI_Gene:105247026,ENSEMBL:ENSMUSG00000106140	MGI:5625093	lncRNA gene	predicted gene, 42208
3	gene	36.35422	36.40651	negative	MGI_C57BL6J_5625094	Gm42209	NCBI_Gene:105247027	MGI:5625094	lncRNA gene	predicted gene, 42209
3	pseudogene	36.39470	36.39520	negative	MGI_C57BL6J_5010020	Gm17835	NCBI_Gene:100415952,ENSEMBL:ENSMUSG00000105281	MGI:5010020	pseudogene	predicted gene, 17835
3	pseudogene	36.42158	36.42212	positive	MGI_C57BL6J_5010072	Gm17887	NCBI_Gene:100416041,ENSEMBL:ENSMUSG00000105792	MGI:5010072	pseudogene	predicted gene, 17887
3	gene	36.44892	36.47589	negative	MGI_C57BL6J_106008	Anxa5	NCBI_Gene:11747,ENSEMBL:ENSMUSG00000027712	MGI:106008	protein coding gene	annexin A5
3	gene	36.47546	36.47552	negative	MGI_C57BL6J_5530854	Mir7009	miRBase:MI0022858,NCBI_Gene:102466786,ENSEMBL:ENSMUSG00000098808	MGI:5530854	miRNA gene	microRNA 7009
3	gene	36.47594	36.48230	positive	MGI_C57BL6J_1919532	1810062G17Rik	NCBI_Gene:72282,ENSEMBL:ENSMUSG00000027713	MGI:1919532	protein coding gene	RIKEN cDNA 1810062G17 gene
3	gene	36.49980	36.50681	negative	MGI_C57BL6J_3650340	Gm11548	NCBI_Gene:329623,ENSEMBL:ENSMUSG00000085320	MGI:3650340	lncRNA gene	predicted gene 11548
3	gene	36.51506	36.52181	negative	MGI_C57BL6J_3650339	Gm11549	NCBI_Gene:100503068,ENSEMBL:ENSMUSG00000085007	MGI:3650339	lincRNA gene	predicted gene 11549
3	gene	36.52922	36.53233	negative	MGI_C57BL6J_5663674	Gm43537	ENSEMBL:ENSMUSG00000105022	MGI:5663674	unclassified gene	predicted gene 43537
3	pseudogene	36.53917	36.54010	negative	MGI_C57BL6J_3650891	Gm11550	NCBI_Gene:665709,ENSEMBL:ENSMUSG00000083388	MGI:3650891	pseudogene	predicted gene 11550
3	gene	36.55261	36.56573	positive	MGI_C57BL6J_1355319	Exosc9	NCBI_Gene:50911,ENSEMBL:ENSMUSG00000027714	MGI:1355319	protein coding gene	exosome component 9
3	gene	36.56486	36.57303	negative	MGI_C57BL6J_108069	Ccna2	NCBI_Gene:12428,ENSEMBL:ENSMUSG00000027715	MGI:108069	protein coding gene	cyclin A2
3	gene	36.57314	36.61349	negative	MGI_C57BL6J_1918742	Bbs7	NCBI_Gene:71492,ENSEMBL:ENSMUSG00000037325	MGI:1918742	protein coding gene	Bardet-Biedl syndrome 7 (human)
3	gene	36.62048	36.69022	negative	MGI_C57BL6J_109526	Trpc3	NCBI_Gene:22065,ENSEMBL:ENSMUSG00000027716	MGI:109526	protein coding gene	transient receptor potential cation channel, subfamily C, member 3
3	gene	36.65407	36.65501	negative	MGI_C57BL6J_5595015	Gm35856	NCBI_Gene:102639576	MGI:5595015	lncRNA gene	predicted gene, 35856
3	pseudogene	36.69480	36.69505	negative	MGI_C57BL6J_3651607	Gm12377	ENSEMBL:ENSMUSG00000082548	MGI:3651607	pseudogene	predicted gene 12377
3	pseudogene	36.82435	36.82506	negative	MGI_C57BL6J_3651608	Gm12376	NCBI_Gene:100417988,ENSEMBL:ENSMUSG00000084027	MGI:3651608	pseudogene	predicted gene 12376
3	gene	36.86306	37.05303	positive	MGI_C57BL6J_2444631	4932438A13Rik	NCBI_Gene:229227,ENSEMBL:ENSMUSG00000037270	MGI:2444631	protein coding gene	RIKEN cDNA 4932438A13 gene
3	gene	37.05221	37.06003	negative	MGI_C57BL6J_3650531	Gm12531	ENSEMBL:ENSMUSG00000086090	MGI:3650531	lncRNA gene	predicted gene 12531
3	gene	37.06309	37.12193	positive	MGI_C57BL6J_103258	Adad1	NCBI_Gene:21744,ENSEMBL:ENSMUSG00000027719	MGI:103258	protein coding gene	adenosine deaminase domain containing 1 (testis specific)
3	pseudogene	37.07756	37.07891	positive	MGI_C57BL6J_3651489	Gm12582	NCBI_Gene:652987,ENSEMBL:ENSMUSG00000081705	MGI:3651489	pseudogene	predicted gene 12582
3	pseudogene	37.10808	37.10933	positive	MGI_C57BL6J_3651485	Gm12583	NCBI_Gene:100416060,ENSEMBL:ENSMUSG00000082878	MGI:3651485	pseudogene	predicted gene 12583
3	pseudogene	37.11673	37.11784	positive	MGI_C57BL6J_3651486	Gm12584	ENSEMBL:ENSMUSG00000083857	MGI:3651486	pseudogene	predicted gene 12584
3	gene	37.12052	37.12596	negative	MGI_C57BL6J_96548	Il2	NCBI_Gene:16183,ENSEMBL:ENSMUSG00000027720	MGI:96548	protein coding gene	interleukin 2
3	gene	37.16972	37.17665	negative	MGI_C57BL6J_5595159	Gm36000	NCBI_Gene:102639768	MGI:5595159	lncRNA gene	predicted gene, 36000
3	gene	37.18218	37.18860	positive	MGI_C57BL6J_3650618	Gm12532	NCBI_Gene:102639848,ENSEMBL:ENSMUSG00000084754	MGI:3650618	lncRNA gene	predicted gene 12532
3	gene	37.22276	37.23264	negative	MGI_C57BL6J_1890474	Il21	NCBI_Gene:60505,ENSEMBL:ENSMUSG00000027718	MGI:1890474	protein coding gene	interleukin 21
3	gene	37.22538	37.22711	positive	MGI_C57BL6J_5595327	Gm36168	NCBI_Gene:102639985	MGI:5595327	lncRNA gene	predicted gene, 36168
3	gene	37.23133	37.23247	positive	MGI_C57BL6J_3650303	Gm12534	ENSEMBL:ENSMUSG00000086517	MGI:3650303	lncRNA gene	predicted gene 12534
3	gene	37.23287	37.23334	positive	MGI_C57BL6J_5663959	Gm43822	ENSEMBL:ENSMUSG00000104998	MGI:5663959	unclassified gene	predicted gene 43822
3	gene	37.25678	37.25689	negative	MGI_C57BL6J_5453946	Gm24169	ENSEMBL:ENSMUSG00000094007	MGI:5453946	miRNA gene	predicted gene, 24169
3	gene	37.30775	37.31271	negative	MGI_C57BL6J_2677454	Cetn4	NCBI_Gene:207175,ENSEMBL:ENSMUSG00000045031	MGI:2677454	protein coding gene	centrin 4
3	gene	37.31249	37.32145	positive	MGI_C57BL6J_2686651	Bbs12	NCBI_Gene:241950,ENSEMBL:ENSMUSG00000051444	MGI:2686651	protein coding gene	Bardet-Biedl syndrome 12 (human)
3	gene	37.31252	37.40487	positive	MGI_C57BL6J_5663576	Gm43439	ENSEMBL:ENSMUSG00000106407	MGI:5663576	lncRNA gene	predicted gene 43439
3	pseudogene	37.31253	37.32919	positive	MGI_C57BL6J_3651849	Gm12540	NCBI_Gene:102640067,ENSEMBL:ENSMUSG00000083353	MGI:3651849	pseudogene	predicted gene 12540
3	gene	37.33329	37.35103	negative	MGI_C57BL6J_3649376	Fgf2os	NCBI_Gene:329626,ENSEMBL:ENSMUSG00000054779	MGI:3649376	antisense lncRNA gene	fibroblast growth factor 2, opposite strand
3	gene	37.33902	37.34152	positive	MGI_C57BL6J_5663625	Gm43488	ENSEMBL:ENSMUSG00000105063	MGI:5663625	unclassified gene	predicted gene 43488
3	gene	37.34835	37.41011	positive	MGI_C57BL6J_95516	Fgf2	NCBI_Gene:14173,ENSEMBL:ENSMUSG00000037225	MGI:95516	protein coding gene	fibroblast growth factor 2
3	gene	37.39221	37.39510	negative	MGI_C57BL6J_5663060	Gm42923	ENSEMBL:ENSMUSG00000105134	MGI:5663060	unclassified gene	predicted gene 42923
3	gene	37.40491	37.42021	negative	MGI_C57BL6J_2387618	Nudt6	NCBI_Gene:229228,ENSEMBL:ENSMUSG00000050174	MGI:2387618	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 6
3	gene	37.41990	37.57910	positive	MGI_C57BL6J_1927170	Spata5	NCBI_Gene:57815,ENSEMBL:ENSMUSG00000027722	MGI:1927170	protein coding gene	spermatogenesis associated 5
3	gene	37.48883	37.49479	positive	MGI_C57BL6J_5663621	Gm43484	ENSEMBL:ENSMUSG00000106166	MGI:5663621	unclassified gene	predicted gene 43484
3	gene	37.54188	37.60239	negative	MGI_C57BL6J_5595571	Gm36412	NCBI_Gene:102640314	MGI:5595571	lncRNA gene	predicted gene, 36412
3	pseudogene	37.55618	37.55650	negative	MGI_C57BL6J_3652207	Gm12564	ENSEMBL:ENSMUSG00000080723	MGI:3652207	pseudogene	predicted gene 12564
3	pseudogene	37.59942	37.60007	negative	MGI_C57BL6J_3652206	Gm12565	NCBI_Gene:665778,ENSEMBL:ENSMUSG00000081093	MGI:3652206	pseudogene	predicted gene 12565
3	gene	37.60989	37.61528	positive	MGI_C57BL6J_1923197	4930594O21Rik	NCBI_Gene:75947,ENSEMBL:ENSMUSG00000085677	MGI:1923197	lncRNA gene	RIKEN cDNA 4930594O21 gene
3	gene	37.63858	37.64066	negative	MGI_C57BL6J_5663059	Gm42922	ENSEMBL:ENSMUSG00000104605	MGI:5663059	unclassified gene	predicted gene 42922
3	gene	37.63995	37.64460	positive	MGI_C57BL6J_1345139	Spry1	NCBI_Gene:24063,ENSEMBL:ENSMUSG00000037211	MGI:1345139	protein coding gene	sprouty RTK signaling antagonist 1
3	gene	37.64461	37.64795	positive	MGI_C57BL6J_5663957	Gm43820	ENSEMBL:ENSMUSG00000106062	MGI:5663957	unclassified gene	predicted gene 43820
3	gene	37.65268	37.65652	negative	MGI_C57BL6J_5826436	Gm46799	NCBI_Gene:108168864	MGI:5826436	lncRNA gene	predicted gene, 46799
3	gene	37.69046	37.69486	negative	MGI_C57BL6J_5625096	Gm42211	NCBI_Gene:105247029	MGI:5625096	lncRNA gene	predicted gene, 42211
3	gene	37.70802	37.71121	positive	MGI_C57BL6J_5663551	Gm43414	ENSEMBL:ENSMUSG00000104935	MGI:5663551	unclassified gene	predicted gene 43414
3	gene	37.71419	37.72449	negative	MGI_C57BL6J_3646006	Gm5148	NCBI_Gene:381438,ENSEMBL:ENSMUSG00000058174	MGI:3646006	protein coding gene	predicted gene 5148
3	pseudogene	37.71471	37.71522	positive	MGI_C57BL6J_3705429	Rps23-ps1	NCBI_Gene:100038875,ENSEMBL:ENSMUSG00000100755	MGI:3705429	pseudogene	ribosomal protein S23, pseudogene 1
3	gene	37.72423	37.74132	positive	MGI_C57BL6J_5595779	Gm36620	NCBI_Gene:102640592	MGI:5595779	lncRNA gene	predicted gene, 36620
3	pseudogene	37.73468	37.73514	positive	MGI_C57BL6J_3643738	Rpl31-ps15	NCBI_Gene:626367,ENSEMBL:ENSMUSG00000097304	MGI:3643738	pseudogene	ribosomal protein L31, pseudogene 15
3	gene	37.75320	37.77440	positive	MGI_C57BL6J_5625095	Gm42210	NCBI_Gene:105247028	MGI:5625095	lncRNA gene	predicted gene, 42210
3	gene	37.76104	37.76730	positive	MGI_C57BL6J_5663058	Gm42921	ENSEMBL:ENSMUSG00000106441	MGI:5663058	lncRNA gene	predicted gene 42921
3	gene	37.80254	37.80265	negative	MGI_C57BL6J_5456181	Gm26404	ENSEMBL:ENSMUSG00000089123	MGI:5456181	snoRNA gene	predicted gene, 26404
3	gene	37.82822	37.84829	positive	MGI_C57BL6J_1925294	4930556A17Rik	NCBI_Gene:102640520	MGI:1925294	lncRNA gene	RIKEN cDNA 4930556A17 gene
3	gene	37.83847	37.83957	positive	MGI_C57BL6J_5662889	Gm42752	ENSEMBL:ENSMUSG00000106621	MGI:5662889	unclassified gene	predicted gene 42752
3	gene	37.84180	37.84307	positive	MGI_C57BL6J_5662890	Gm42753	ENSEMBL:ENSMUSG00000105252	MGI:5662890	unclassified gene	predicted gene 42753
3	gene	37.89881	37.99273	positive	MGI_C57BL6J_5434111	Gm20755	NCBI_Gene:626410,ENSEMBL:ENSMUSG00000106461	MGI:5434111	lncRNA gene	predicted gene, 20755
3	pseudogene	37.95961	37.96009	negative	MGI_C57BL6J_3643378	Gm7799	ENSEMBL:ENSMUSG00000087457	MGI:3643378	pseudogene	predicted gene 7799
3	gene	37.98279	37.98335	positive	MGI_C57BL6J_5662888	Gm42751	ENSEMBL:ENSMUSG00000105099	MGI:5662888	unclassified gene	predicted gene 42751
3	gene	37.99511	37.99524	negative	MGI_C57BL6J_5452676	Gm22899	ENSEMBL:ENSMUSG00000077728	MGI:5452676	snoRNA gene	predicted gene, 22899
3	gene	38.09463	38.13019	negative	MGI_C57BL6J_5663958	Gm43821	ENSEMBL:ENSMUSG00000105219	MGI:5663958	lncRNA gene	predicted gene 43821
3	pseudogene	38.10123	38.10798	negative	MGI_C57BL6J_3643358	Rpl21-ps10	NCBI_Gene:665821,ENSEMBL:ENSMUSG00000105359	MGI:3643358	pseudogene	ribosomal protein L21, pseudogene 10
3	gene	38.15191	38.15915	positive	MGI_C57BL6J_5595839	Gm36680	NCBI_Gene:102640666	MGI:5595839	lncRNA gene	predicted gene, 36680
3	gene	38.20315	38.20812	negative	MGI_C57BL6J_1918592	5430434I15Rik	NCBI_Gene:71342,ENSEMBL:ENSMUSG00000106002	MGI:1918592	lncRNA gene	RIKEN cDNA 5430434I15 gene
3	pseudogene	38.22345	38.22382	positive	MGI_C57BL6J_3781143	Gm2965	NCBI_Gene:100040785,ENSEMBL:ENSMUSG00000105943	MGI:3781143	pseudogene	predicted gene 2965
3	pseudogene	38.25402	38.25480	positive	MGI_C57BL6J_5010140	Gm17955	NCBI_Gene:100416169	MGI:5010140	pseudogene	predicted gene, 17955
3	gene	38.26784	38.26808	negative	MGI_C57BL6J_5455351	Gm25574	ENSEMBL:ENSMUSG00000092986	MGI:5455351	unclassified non-coding RNA gene	predicted gene, 25574
3	gene	38.36615	38.36888	negative	MGI_C57BL6J_5625098	Gm42213	NCBI_Gene:105247031	MGI:5625098	lncRNA gene	predicted gene, 42213
3	gene	38.36940	38.37364	positive	MGI_C57BL6J_5663057	Gm42920	ENSEMBL:ENSMUSG00000106008	MGI:5663057	lncRNA gene	predicted gene 42920
3	gene	38.41897	38.42015	negative	MGI_C57BL6J_1917958	3830422I06Rik	ENSEMBL:ENSMUSG00000106485	MGI:1917958	unclassified gene	RIKEN cDNA 3830422I06 gene
3	gene	38.42655	38.44387	negative	MGI_C57BL6J_5595982	Gm36823	NCBI_Gene:102640855,ENSEMBL:ENSMUSG00000105516	MGI:5595982	lncRNA gene	predicted gene, 36823
3	pseudogene	38.43895	38.43984	negative	MGI_C57BL6J_3646285	Gm7815	NCBI_Gene:665838,ENSEMBL:ENSMUSG00000106201	MGI:3646285	pseudogene	predicted gene 7815
3	gene	38.44926	38.48486	negative	MGI_C57BL6J_2139777	Ankrd50	NCBI_Gene:99696,ENSEMBL:ENSMUSG00000044864	MGI:2139777	protein coding gene	ankyrin repeat domain 50
3	pseudogene	38.55797	38.55886	negative	MGI_C57BL6J_3779766	Gm7824	NCBI_Gene:665855,ENSEMBL:ENSMUSG00000105360	MGI:3779766	pseudogene	predicted gene 7824
3	gene	38.55811	38.55821	negative	MGI_C57BL6J_5454239	Gm24462	ENSEMBL:ENSMUSG00000076385	MGI:5454239	miRNA gene	predicted gene, 24462
3	gene	38.61425	38.61556	positive	MGI_C57BL6J_5663675	Gm43538	ENSEMBL:ENSMUSG00000106168	MGI:5663675	lncRNA gene	predicted gene 43538
3	gene	38.66361	38.70922	positive	MGI_C57BL6J_5589038	Gm29879	NCBI_Gene:102631576	MGI:5589038	lncRNA gene	predicted gene, 29879
3	gene	38.76048	38.76195	negative	MGI_C57BL6J_5589118	Gm29959	NCBI_Gene:102631683	MGI:5589118	lncRNA gene	predicted gene, 29959
3	gene	38.87457	38.88826	negative	MGI_C57BL6J_2441892	C230034O21Rik	NCBI_Gene:102632538,ENSEMBL:ENSMUSG00000086181	MGI:2441892	lncRNA gene	RIKEN cDNA C230034O21 gene
3	gene	38.88563	39.01199	positive	MGI_C57BL6J_3045256	Fat4	NCBI_Gene:329628,ENSEMBL:ENSMUSG00000046743	MGI:3045256	protein coding gene	FAT atypical cadherin 4
3	gene	39.00860	39.00968	negative	MGI_C57BL6J_5663676	Gm43539	ENSEMBL:ENSMUSG00000105910	MGI:5663676	lncRNA gene	predicted gene 43539
3	pseudogene	39.12853	39.12891	negative	MGI_C57BL6J_5663445	Gm43308	ENSEMBL:ENSMUSG00000104792	MGI:5663445	pseudogene	predicted gene 43308
3	gene	39.15083	39.15967	negative	MGI_C57BL6J_5589170	Gm30011	NCBI_Gene:102631750	MGI:5589170	lncRNA gene	predicted gene, 30011
3	pseudogene	39.21756	39.21785	negative	MGI_C57BL6J_5663145	Gm43008	ENSEMBL:ENSMUSG00000107333	MGI:5663145	pseudogene	predicted gene 43008
3	gene	39.27713	39.30593	positive	MGI_C57BL6J_5625099	Gm42214	NCBI_Gene:105247032	MGI:5625099	lncRNA gene	predicted gene, 42214
3	pseudogene	39.35737	39.35913	negative	MGI_C57BL6J_3704215	Gm9845	NCBI_Gene:100040853,ENSEMBL:ENSMUSG00000050533	MGI:3704215	pseudogene	predicted pseudogene 9845
3	pseudogene	39.44389	39.44435	positive	MGI_C57BL6J_5295673	Gm20566	NCBI_Gene:100047050	MGI:5295673	pseudogene	predicted gene, 20566
3	gene	39.46078	39.59865	positive	MGI_C57BL6J_5589222	Gm30063	NCBI_Gene:102631823	MGI:5589222	lncRNA gene	predicted gene, 30063
3	gene	39.52552	39.53415	negative	MGI_C57BL6J_5625100	Gm42215	NCBI_Gene:105247033	MGI:5625100	lncRNA gene	predicted gene, 42215
3	gene	39.63596	39.63608	negative	MGI_C57BL6J_4422060	n-R5s195	ENSEMBL:ENSMUSG00000093952	MGI:4422060	rRNA gene	nuclear encoded rRNA 5S 195
3	gene	39.63606	39.63878	positive	MGI_C57BL6J_5662918	Gm42781	ENSEMBL:ENSMUSG00000106786	MGI:5662918	unclassified gene	predicted gene 42781
3	gene	39.66629	39.66645	positive	MGI_C57BL6J_5453573	Gm23796	ENSEMBL:ENSMUSG00000065945	MGI:5453573	snRNA gene	predicted gene, 23796
3	gene	39.71315	39.72565	positive	MGI_C57BL6J_5826471	Gm46834	NCBI_Gene:108168914	MGI:5826471	lncRNA gene	predicted gene, 46834
3	gene	39.79963	39.79972	negative	MGI_C57BL6J_5453608	Gm23831	ENSEMBL:ENSMUSG00000089520	MGI:5453608	snoRNA gene	predicted gene, 23831
3	pseudogene	39.82048	39.82076	negative	MGI_C57BL6J_5662923	Gm42786	ENSEMBL:ENSMUSG00000106846	MGI:5662923	pseudogene	predicted gene 42786
3	pseudogene	39.82358	39.82741	positive	MGI_C57BL6J_5662922	Gm42785	ENSEMBL:ENSMUSG00000106948	MGI:5662922	pseudogene	predicted gene 42785
3	gene	40.42571	40.45380	negative	MGI_C57BL6J_5589343	Gm30184	NCBI_Gene:102632001	MGI:5589343	lncRNA gene	predicted gene, 30184
3	gene	40.45843	40.46115	positive	MGI_C57BL6J_5625101	Gm42216	NCBI_Gene:105247034	MGI:5625101	lncRNA gene	predicted gene, 42216
3	gene	40.48090	40.48573	positive	MGI_C57BL6J_5625102	Gm42217	NCBI_Gene:105247035	MGI:5625102	lncRNA gene	predicted gene, 42217
3	gene	40.48702	40.48993	positive	MGI_C57BL6J_5826438	Gm46801	NCBI_Gene:108168866	MGI:5826438	lncRNA gene	predicted gene, 46801
3	gene	40.50487	40.52291	negative	MGI_C57BL6J_1919477	1700017G19Rik	NCBI_Gene:100040882,ENSEMBL:ENSMUSG00000037884	MGI:1919477	lncRNA gene	RIKEN cDNA 1700017G19 gene
3	gene	40.50998	40.51183	positive	MGI_C57BL6J_5826437	Gm46800	NCBI_Gene:108168865	MGI:5826437	lncRNA gene	predicted gene, 46800
3	gene	40.51882	40.51889	positive	MGI_C57BL6J_5453587	Gm23810	ENSEMBL:ENSMUSG00000092891	MGI:5453587	miRNA gene	predicted gene, 23810
3	gene	40.53129	40.70478	positive	MGI_C57BL6J_2443752	Intu	NCBI_Gene:380614,ENSEMBL:ENSMUSG00000060798	MGI:2443752	protein coding gene	inturned planar cell polarity protein
3	pseudogene	40.65887	40.65917	negative	MGI_C57BL6J_3801939	Gm16114	ENSEMBL:ENSMUSG00000089932	MGI:3801939	pseudogene	predicted gene 16114
3	gene	40.70885	40.72610	positive	MGI_C57BL6J_1920583	Slc25a31	NCBI_Gene:73333,ENSEMBL:ENSMUSG00000069041	MGI:1920583	protein coding gene	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 31
3	gene	40.74440	40.79610	positive	MGI_C57BL6J_107422	Hspa4l	NCBI_Gene:18415,ENSEMBL:ENSMUSG00000025757	MGI:107422	protein coding gene	heat shock protein 4 like
3	gene	40.79364	40.79846	positive	MGI_C57BL6J_1918107	4921509J17Rik	NA	NA	unclassified gene	RIKEN cDNA 4921509J17 gene
3	gene	40.79995	40.81688	positive	MGI_C57BL6J_101783	Plk4	NCBI_Gene:20873,ENSEMBL:ENSMUSG00000025758	MGI:101783	protein coding gene	polo like kinase 4
3	gene	40.81810	40.84689	negative	MGI_C57BL6J_1919425	Mfsd8	NCBI_Gene:72175,ENSEMBL:ENSMUSG00000025759	MGI:1919425	protein coding gene	major facilitator superfamily domain containing 8
3	pseudogene	40.84682	40.87561	positive	MGI_C57BL6J_3780180	Gm2011	NCBI_Gene:100039027,ENSEMBL:ENSMUSG00000107741	MGI:3780180	pseudogene	predicted gene 2011
3	gene	40.84697	40.93814	positive	MGI_C57BL6J_1915468	Abhd18	NCBI_Gene:269423,ENSEMBL:ENSMUSG00000037818	MGI:1915468	protein coding gene	abhydrolase domain containing 18
3	pseudogene	40.85348	40.85529	negative	MGI_C57BL6J_3795712	Gm10731	NCBI_Gene:100039043,ENSEMBL:ENSMUSG00000074620	MGI:3795712	pseudogene	predicted gene 10731
3	gene	40.86395	40.86505	negative	MGI_C57BL6J_5690528	Gm44136	ENSEMBL:ENSMUSG00000107524	MGI:5690528	unclassified gene	predicted gene, 44136
3	gene	40.87665	40.89455	negative	MGI_C57BL6J_3648839	6430590A07Rik	NCBI_Gene:619719,ENSEMBL:ENSMUSG00000097583	MGI:3648839	lncRNA gene	RIKEN cDNA 6430590A07 gene
3	pseudogene	40.87698	40.87725	negative	MGI_C57BL6J_5753100	Gm44524	ENSEMBL:ENSMUSG00000107892	MGI:5753100	pseudogene	predicted gene 44524
3	gene	40.90020	40.90254	negative	MGI_C57BL6J_1920547	1700034I23Rik	NCBI_Gene:73297,ENSEMBL:ENSMUSG00000074619	MGI:1920547	protein coding gene	RIKEN cDNA 1700034I23 gene
3	gene	40.94869	40.94986	negative	MGI_C57BL6J_5826439	Gm46802	NCBI_Gene:108168867	MGI:5826439	lncRNA gene	predicted gene, 46802
3	gene	40.94972	41.04023	positive	MGI_C57BL6J_1914604	Larp1b	NCBI_Gene:214048,ENSEMBL:ENSMUSG00000025762	MGI:1914604	protein coding gene	La ribonucleoprotein domain family, member 1B
3	gene	40.97850	41.00609	positive	MGI_C57BL6J_5589448	Gm30289	NA	NA	protein coding gene	predicted gene%2c 30289
3	gene	40.99269	40.99285	positive	MGI_C57BL6J_5451820	Gm22043	ENSEMBL:ENSMUSG00000064927	MGI:5451820	snRNA gene	predicted gene, 22043
3	gene	41.00243	41.00609	positive	MGI_C57BL6J_5662573	Gm42436	ENSEMBL:ENSMUSG00000105517	MGI:5662573	unclassified gene	predicted gene 42436
3	gene	41.00552	41.00644	negative	MGI_C57BL6J_5662574	Gm42437	ENSEMBL:ENSMUSG00000105674	MGI:5662574	unclassified gene	predicted gene 42437
3	gene	41.06633	41.08305	negative	MGI_C57BL6J_1918054	Pgrmc2	NCBI_Gene:70804,ENSEMBL:ENSMUSG00000049940	MGI:1918054	protein coding gene	progesterone receptor membrane component 2
3	gene	41.15803	41.17346	negative	MGI_C57BL6J_5622923	Gm40038	NCBI_Gene:105244429,ENSEMBL:ENSMUSG00000105258	MGI:5622923	lncRNA gene	predicted gene, 40038
3	gene	41.28606	41.29059	negative	MGI_C57BL6J_3642810	Gm16508	ENSEMBL:ENSMUSG00000106000	MGI:3642810	lncRNA gene	predicted gene 16508
3	gene	41.35415	41.40446	positive	MGI_C57BL6J_1920712	1700052H01Rik	NCBI_Gene:73462,ENSEMBL:ENSMUSG00000105297	MGI:1920712	lncRNA gene	RIKEN cDNA 1700052H01 gene
3	gene	41.44134	41.44147	negative	MGI_C57BL6J_5455264	Gm25487	ENSEMBL:ENSMUSG00000089350	MGI:5455264	snoRNA gene	predicted gene, 25487
3	gene	41.47491	41.48400	negative	MGI_C57BL6J_5622925	Gm40040	NCBI_Gene:105244431,ENSEMBL:ENSMUSG00000105260	MGI:5622925	lncRNA gene	predicted gene, 40040
3	gene	41.48402	41.49320	negative	MGI_C57BL6J_1925956	Platr4	NCBI_Gene:78706,ENSEMBL:ENSMUSG00000097639	MGI:1925956	lncRNA gene	pluripotency associated transcript 4
3	pseudogene	41.48569	41.48641	positive	MGI_C57BL6J_3648422	Gm6069	NCBI_Gene:606542,ENSEMBL:ENSMUSG00000104616	MGI:3648422	pseudogene	predicted gene 6069
3	gene	41.50093	41.52847	negative	MGI_C57BL6J_1925898	2400006E01Rik	NCBI_Gene:78648,ENSEMBL:ENSMUSG00000106223	MGI:1925898	lncRNA gene	RIKEN cDNA 2400006E01 gene
3	gene	41.55573	41.61686	positive	MGI_C57BL6J_1925835	Jade1	NCBI_Gene:269424,ENSEMBL:ENSMUSG00000025764	MGI:1925835	protein coding gene	jade family PHD finger 1
3	gene	41.56050	41.56370	negative	MGI_C57BL6J_5590425	Gm31266	NCBI_Gene:105244433,ENSEMBL:ENSMUSG00000103843	MGI:5590425	lncRNA gene	predicted gene, 31266
3	gene	41.61755	41.62371	negative	MGI_C57BL6J_5622926	Gm40041	NCBI_Gene:105244432	MGI:5622926	lncRNA gene	predicted gene, 40041
3	gene	41.62671	41.74253	negative	MGI_C57BL6J_1914411	Sclt1	NCBI_Gene:67161,ENSEMBL:ENSMUSG00000059834	MGI:1914411	protein coding gene	sodium channel and clathrin linker 1
3	gene	41.64812	41.64925	negative	MGI_C57BL6J_5611275	Gm38047	ENSEMBL:ENSMUSG00000102436	MGI:5611275	unclassified gene	predicted gene, 38047
3	gene	41.74261	41.80332	positive	MGI_C57BL6J_1289213	D3Ertd751e	NCBI_Gene:73852,ENSEMBL:ENSMUSG00000025766	MGI:1289213	protein coding gene	DNA segment, Chr 3, ERATO Doi 751, expressed
3	gene	41.77318	41.77579	positive	MGI_C57BL6J_5610496	Gm37268	ENSEMBL:ENSMUSG00000103952	MGI:5610496	unclassified gene	predicted gene, 37268
3	pseudogene	41.97607	41.97812	negative	MGI_C57BL6J_3645044	Gm7899	NCBI_Gene:666031,ENSEMBL:ENSMUSG00000103823	MGI:3645044	pseudogene	predicted gene 7899
3	pseudogene	41.97633	41.97812	positive	MGI_C57BL6J_5610576	Gm37348	ENSEMBL:ENSMUSG00000102972	MGI:5610576	pseudogene	predicted gene, 37348
3	gene	42.16387	42.16764	positive	MGI_C57BL6J_5611074	Gm37846	ENSEMBL:ENSMUSG00000102610	MGI:5611074	unclassified gene	predicted gene, 37846
3	pseudogene	42.36263	42.36278	negative	MGI_C57BL6J_5611502	Gm38274	ENSEMBL:ENSMUSG00000104089	MGI:5611502	pseudogene	predicted gene, 38274
3	gene	42.57246	42.57300	positive	MGI_C57BL6J_5610761	Gm37533	ENSEMBL:ENSMUSG00000103426	MGI:5610761	unclassified gene	predicted gene, 37533
3	pseudogene	42.58511	42.58560	negative	MGI_C57BL6J_5611272	Gm38044	ENSEMBL:ENSMUSG00000104294	MGI:5611272	pseudogene	predicted gene, 38044
3	pseudogene	43.25039	43.25093	positive	MGI_C57BL6J_3780131	Gm9723	NCBI_Gene:677788,ENSEMBL:ENSMUSG00000102149	MGI:3780131	pseudogene	predicted gene 9723
3	pseudogene	43.39077	43.39194	negative	MGI_C57BL6J_5011050	Gm18865	NCBI_Gene:100417854,ENSEMBL:ENSMUSG00000102334	MGI:5011050	pseudogene	predicted gene, 18865
3	gene	43.54717	43.54828	positive	MGI_C57BL6J_5610204	Gm36976	ENSEMBL:ENSMUSG00000104303	MGI:5610204	unclassified gene	predicted gene, 36976
3	pseudogene	43.76405	43.76476	negative	MGI_C57BL6J_5588898	Gm29739	NCBI_Gene:101055891,ENSEMBL:ENSMUSG00000104083	MGI:5588898	pseudogene	predicted gene, 29739
3	gene	43.92557	43.92586	positive	MGI_C57BL6J_5455491	Gm25714	ENSEMBL:ENSMUSG00000089251	MGI:5455491	unclassified non-coding RNA gene	predicted gene, 25714
3	pseudogene	43.92760	43.92795	negative	MGI_C57BL6J_5591334	Gm32175	ENSEMBL:ENSMUSG00000102792	MGI:5591334	pseudogene	predicted gene, 32175
3	gene	43.95572	43.95592	positive	MGI_C57BL6J_5610974	Gm37746	ENSEMBL:ENSMUSG00000103148	MGI:5610974	unclassified gene	predicted gene, 37746
3	pseudogene	44.49350	44.49390	negative	MGI_C57BL6J_5610593	Gm37365	ENSEMBL:ENSMUSG00000104013	MGI:5610593	pseudogene	predicted gene, 37365
3	gene	44.65990	44.66315	positive	MGI_C57BL6J_5611356	Gm38128	ENSEMBL:ENSMUSG00000104051	MGI:5611356	unclassified gene	predicted gene, 38128
3	pseudogene	44.71813	44.71851	negative	MGI_C57BL6J_5610825	Gm37597	ENSEMBL:ENSMUSG00000103353	MGI:5610825	pseudogene	predicted gene, 37597
3	pseudogene	44.72516	44.72574	positive	MGI_C57BL6J_5011051	Gm18866	NCBI_Gene:100417856	MGI:5011051	pseudogene	predicted gene, 18866
3	gene	44.98320	44.98330	positive	MGI_C57BL6J_5454774	Gm24997	ENSEMBL:ENSMUSG00000088535	MGI:5454774	snRNA gene	predicted gene, 24997
3	gene	45.16069	45.16080	positive	MGI_C57BL6J_5531371	Gm27989	ENSEMBL:ENSMUSG00000099285	MGI:5531371	miRNA gene	predicted gene, 27989
3	pseudogene	45.17179	45.17324	negative	MGI_C57BL6J_5434370	Gm21015	NCBI_Gene:100534291	MGI:5434370	pseudogene	predicted gene, 21015
3	gene	45.26999	45.27257	negative	MGI_C57BL6J_5611352	Gm38124	ENSEMBL:ENSMUSG00000103082	MGI:5611352	unclassified gene	predicted gene, 38124
3	gene	45.27342	45.27497	negative	MGI_C57BL6J_1924316	5930409G06Rik	ENSEMBL:ENSMUSG00000103477	MGI:1924316	unclassified gene	RIKEN cDNA 5930409G06 gene
3	gene	45.28044	45.37826	negative	MGI_C57BL6J_1919761	2610316D01Rik	NCBI_Gene:72511,ENSEMBL:ENSMUSG00000097040	MGI:1919761	lncRNA gene	RIKEN cDNA 2610316D01 gene
3	pseudogene	45.33216	45.33241	negative	MGI_C57BL6J_5610224	Gm36996	ENSEMBL:ENSMUSG00000103430	MGI:5610224	pseudogene	predicted gene, 36996
3	gene	45.37840	45.43562	positive	MGI_C57BL6J_1338042	Pcdh10	NCBI_Gene:18526,ENSEMBL:ENSMUSG00000049100	MGI:1338042	protein coding gene	protocadherin 10
3	gene	45.38548	45.38960	positive	MGI_C57BL6J_2442672	6330566A10Rik	NA	NA	unclassified gene	RIKEN cDNA 6330566A10 gene
3	gene	45.39986	45.40200	positive	MGI_C57BL6J_2444936	D930002L09Rik	NA	NA	unclassified gene	RIKEN cDNA D930002L09 gene
3	gene	45.41658	45.43931	negative	MGI_C57BL6J_1919524	1700027H10Rik	NCBI_Gene:72274,ENSEMBL:ENSMUSG00000100799	MGI:1919524	lncRNA gene	RIKEN cDNA 1700027H10 gene
3	gene	45.43838	45.44096	positive	MGI_C57BL6J_3780305	Gm2136	ENSEMBL:ENSMUSG00000103713	MGI:3780305	protein coding gene	predicted gene 2136
3	gene	45.44567	45.44881	positive	MGI_C57BL6J_5610573	Gm37345	ENSEMBL:ENSMUSG00000103947	MGI:5610573	unclassified gene	predicted gene, 37345
3	pseudogene	45.69054	45.69090	negative	MGI_C57BL6J_5611063	Gm37835	ENSEMBL:ENSMUSG00000103534	MGI:5611063	pseudogene	predicted gene, 37835
3	gene	45.77542	45.77589	negative	MGI_C57BL6J_5611394	Gm38166	ENSEMBL:ENSMUSG00000102190	MGI:5611394	unclassified gene	predicted gene, 38166
3	pseudogene	45.77587	45.86058	negative	MGI_C57BL6J_5591499	Gm32340	NCBI_Gene:102634856,ENSEMBL:ENSMUSG00000104491	MGI:5591499	pseudogene	predicted gene, 32340
3	gene	45.81774	45.81790	positive	MGI_C57BL6J_5455573	Gm25796	ENSEMBL:ENSMUSG00000064579	MGI:5455573	snRNA gene	predicted gene, 25796
3	pseudogene	45.86121	45.86995	negative	MGI_C57BL6J_5591575	Gm32416	NCBI_Gene:102634958	MGI:5591575	pseudogene	predicted gene, 32416
3	gene	45.97858	45.97870	positive	MGI_C57BL6J_5453114	Gm23337	ENSEMBL:ENSMUSG00000089584	MGI:5453114	snRNA gene	predicted gene, 23337
3	gene	46.28983	46.28996	positive	MGI_C57BL6J_5455858	Gm26081	ENSEMBL:ENSMUSG00000077256	MGI:5455858	snoRNA gene	predicted gene, 26081
3	pseudogene	46.41340	46.41412	positive	MGI_C57BL6J_5011028	Gm18843	NCBI_Gene:100417811,ENSEMBL:ENSMUSG00000104511	MGI:5011028	pseudogene	predicted gene, 18843
3	gene	46.44085	46.44822	negative	MGI_C57BL6J_3643087	Pabpc4l	NCBI_Gene:241989,ENSEMBL:ENSMUSG00000090919	MGI:3643087	protein coding gene	poly(A) binding protein, cytoplasmic 4-like
3	pseudogene	46.62112	46.62136	positive	MGI_C57BL6J_5610673	Gm37445	ENSEMBL:ENSMUSG00000102589	MGI:5610673	pseudogene	predicted gene, 37445
3	gene	46.90067	46.90078	negative	MGI_C57BL6J_5531112	Mir6379	miRBase:MI0021910,NCBI_Gene:102465199,ENSEMBL:ENSMUSG00000098417	MGI:5531112	miRNA gene	microRNA 6379
3	pseudogene	47.04911	47.05178	negative	MGI_C57BL6J_3641761	Gm10356	NCBI_Gene:545517,ENSEMBL:ENSMUSG00000072387	MGI:3641761	pseudogene	predicted gene 10356
3	pseudogene	47.08453	47.08575	negative	MGI_C57BL6J_3646161	Gm5274	NCBI_Gene:383849,ENSEMBL:ENSMUSG00000097985	MGI:3646161	pseudogene	predicted gene 5274
3	gene	47.20063	47.20076	positive	MGI_C57BL6J_5453668	Gm23891	ENSEMBL:ENSMUSG00000088739	MGI:5453668	snoRNA gene	predicted gene, 23891
3	pseudogene	47.23050	47.23100	negative	MGI_C57BL6J_3643228	Rpl23a-ps5	NCBI_Gene:383850,ENSEMBL:ENSMUSG00000102220	MGI:3643228	pseudogene	ribosomal protein L23A, pseudogene 5
3	gene	47.26308	47.26580	negative	MGI_C57BL6J_3809922	Gm10730	ENSEMBL:ENSMUSG00000103491	MGI:3809922	unclassified gene	predicted gene 10730
3	pseudogene	47.45961	47.46034	negative	MGI_C57BL6J_3780399	Gm2229	NCBI_Gene:100039426,ENSEMBL:ENSMUSG00000103798	MGI:3780399	pseudogene	predicted gene 2229
3	pseudogene	48.02601	48.02676	negative	MGI_C57BL6J_3648898	Gm7977	NCBI_Gene:666202,ENSEMBL:ENSMUSG00000103257	MGI:3648898	pseudogene	predicted gene 7977
3	gene	48.07834	48.07845	positive	MGI_C57BL6J_5610523	Gm37295	ENSEMBL:ENSMUSG00000104110	MGI:5610523	unclassified gene	predicted gene, 37295
3	gene	48.54642	48.57947	positive	MGI_C57BL6J_5826472	Gm46835	NCBI_Gene:108168915	MGI:5826472	lncRNA gene	predicted gene, 46835
3	gene	48.60573	48.60910	negative	MGI_C57BL6J_1913582	1700018B24Rik	NCBI_Gene:66332,ENSEMBL:ENSMUSG00000037910	MGI:1913582	lncRNA gene	RIKEN cDNA 1700018B24 gene
3	gene	48.74851	48.76095	negative	MGI_C57BL6J_5610418	Gm37190	ENSEMBL:ENSMUSG00000102181	MGI:5610418	lncRNA gene	predicted gene, 37190
3	gene	48.95472	48.95488	positive	MGI_C57BL6J_5453288	Gm23511	ENSEMBL:ENSMUSG00000065018	MGI:5453288	snRNA gene	predicted gene, 23511
3	gene	49.06237	49.09636	positive	MGI_C57BL6J_5590574	Gm31415	NCBI_Gene:102633632,ENSEMBL:ENSMUSG00000102263	MGI:5590574	lncRNA gene	predicted gene, 31415
3	gene	49.13746	49.13853	positive	MGI_C57BL6J_5611047	Gm37819	ENSEMBL:ENSMUSG00000104186	MGI:5611047	unclassified gene	predicted gene, 37819
3	pseudogene	49.20771	49.20807	negative	MGI_C57BL6J_5610912	Gm37684	ENSEMBL:ENSMUSG00000103027	MGI:5610912	pseudogene	predicted gene, 37684
3	gene	49.32568	49.36736	positive	MGI_C57BL6J_5295664	Gm20557	NCBI_Gene:329633,ENSEMBL:ENSMUSG00000102679	MGI:5295664	lncRNA gene	predicted gene, 20557
3	pseudogene	49.38115	49.38285	negative	MGI_C57BL6J_3643624	Gm5846	NCBI_Gene:545519,ENSEMBL:ENSMUSG00000104309	MGI:3643624	pseudogene	predicted gene 5846
3	pseudogene	49.40082	49.46744	negative	MGI_C57BL6J_3780091	Gm9683	NCBI_Gene:676568	MGI:3780091	pseudogene	predicted gene 9683
3	gene	49.49135	49.49148	positive	MGI_C57BL6J_5452257	Gm22480	ENSEMBL:ENSMUSG00000084517	MGI:5452257	snoRNA gene	predicted gene, 22480
3	pseudogene	49.53075	49.53131	positive	MGI_C57BL6J_5610652	Gm37424	ENSEMBL:ENSMUSG00000104437	MGI:5610652	pseudogene	predicted gene, 37424
3	pseudogene	49.60356	49.60388	positive	MGI_C57BL6J_5611489	Gm38261	ENSEMBL:ENSMUSG00000102731	MGI:5611489	pseudogene	predicted gene, 38261
3	pseudogene	49.60423	49.60447	positive	MGI_C57BL6J_5611316	Gm38088	ENSEMBL:ENSMUSG00000103249	MGI:5611316	pseudogene	predicted gene, 38088
3	pseudogene	49.63244	49.63297	negative	MGI_C57BL6J_3780498	Gm2328	NCBI_Gene:100039587,ENSEMBL:ENSMUSG00000104134	MGI:3780498	pseudogene	predicted gene 2328
3	pseudogene	49.64348	49.64413	positive	MGI_C57BL6J_5588900	Gm29741	NCBI_Gene:101055903,ENSEMBL:ENSMUSG00000103568	MGI:5588900	pseudogene	predicted gene, 29741
3	gene	49.65876	49.65887	positive	MGI_C57BL6J_5452873	Gm23096	ENSEMBL:ENSMUSG00000065381	MGI:5452873	snRNA gene	predicted gene, 23096
3	gene	49.74329	49.75738	negative	MGI_C57BL6J_1920423	Pcdh18	NCBI_Gene:73173,ENSEMBL:ENSMUSG00000037892	MGI:1920423	protein coding gene	protocadherin 18
3	pseudogene	49.78043	49.78089	negative	MGI_C57BL6J_5610778	Gm37550	ENSEMBL:ENSMUSG00000102943	MGI:5610778	pseudogene	predicted gene, 37550
3	gene	49.89253	50.49909	negative	MGI_C57BL6J_1347355	Slc7a11	NCBI_Gene:26570,ENSEMBL:ENSMUSG00000027737	MGI:1347355	protein coding gene	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
3	gene	50.00197	50.01078	positive	MGI_C57BL6J_5611082	Gm37854	ENSEMBL:ENSMUSG00000102892	MGI:5611082	lncRNA gene	predicted gene, 37854
3	gene	50.01177	50.02624	negative	MGI_C57BL6J_5622927	Gm40042	NCBI_Gene:105244434	MGI:5622927	lncRNA gene	predicted gene, 40042
3	pseudogene	50.02967	50.02999	positive	MGI_C57BL6J_5611054	Gm37826	ENSEMBL:ENSMUSG00000104457	MGI:5611054	pseudogene	predicted gene, 37826
3	pseudogene	50.16666	50.16689	negative	MGI_C57BL6J_5610920	Gm37692	ENSEMBL:ENSMUSG00000104349	MGI:5610920	pseudogene	predicted gene, 37692
3	pseudogene	50.25485	50.25544	positive	MGI_C57BL6J_3780515	Gm2345	NCBI_Gene:100039628,ENSEMBL:ENSMUSG00000102167	MGI:3780515	pseudogene	predicted gene 2345
3	gene	50.40028	50.40428	negative	MGI_C57BL6J_5610726	Gm37498	ENSEMBL:ENSMUSG00000103907	MGI:5610726	unclassified gene	predicted gene, 37498
3	gene	50.51640	50.60731	negative	MGI_C57BL6J_3643374	Gm6209	NCBI_Gene:621304,ENSEMBL:ENSMUSG00000102715	MGI:3643374	lncRNA gene	predicted gene 6209
3	gene	50.57519	50.57652	negative	MGI_C57BL6J_1923259	5830415G21Rik	ENSEMBL:ENSMUSG00000102895	MGI:1923259	unclassified gene	RIKEN cDNA 5830415G21 gene
3	pseudogene	50.59799	50.59850	negative	MGI_C57BL6J_5611465	Gm38237	NCBI_Gene:108168851,ENSEMBL:ENSMUSG00000103745	MGI:5611465	pseudogene	predicted gene, 38237
3	gene	50.62435	50.62841	negative	MGI_C57BL6J_5610427	Gm37199	ENSEMBL:ENSMUSG00000104068	MGI:5610427	unclassified gene	predicted gene, 37199
3	gene	50.67970	50.68340	negative	MGI_C57BL6J_5610689	Gm37461	ENSEMBL:ENSMUSG00000104281	MGI:5610689	unclassified gene	predicted gene, 37461
3	gene	50.70690	50.71189	negative	MGI_C57BL6J_5622928	Gm40043	NCBI_Gene:105244435	MGI:5622928	lncRNA gene	predicted gene, 40043

#} else {
#  print(paste0("There are too many peaks (",nrow(peaks)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
#}

Chromsome 4

#if(nrow(peaks) < 50){
for (i in 2){
#for (i in 1:1){
  #Plot 1

  #marker = find_marker(gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i])
  #gp <- g[,marker]
  #gp[gp==1] <- "AA"
  #gp[gp==2] <- "AB"
  #gp[gp==0] <- NA
  #plot_pxg(gp, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  #title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ###dev.off()

  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], gm$covar[peaks$phenotype[i]])
  blup_sub <- scan1blup(pr_sub[,chr], gm$covar[peaks$phenotype[i]])

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.eoi_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM])")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM])")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM])")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.eoi_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))


}

chr	type	start	stop	strand	ID	Name	Dbxref	gene_id	mgi_type	description
4	gene	118.8980	118.9974	negative	MGI_C57BL6J_3651214	Gm12865	NCBI_Gene:105244672,ENSEMBL:ENSMUSG00000087238	MGI:3651214	lncRNA gene	predicted gene 12865
4	pseudogene	118.9421	118.9434	negative	MGI_C57BL6J_3649664	Gm12856	NCBI_Gene:100415963,ENSEMBL:ENSMUSG00000084133	MGI:3649664	pseudogene	predicted gene 12856
4	gene	118.9543	118.9549	negative	MGI_C57BL6J_3651212	Gm12863	NCBI_Gene:100038571,ENSEMBL:ENSMUSG00000073765	MGI:3651212	lncRNA gene	predicted gene 12863
4	gene	118.9616	118.9689	positive	MGI_C57BL6J_2140628	Lao1	NCBI_Gene:100470,ENSEMBL:ENSMUSG00000024903	MGI:2140628	protein coding gene	L-amino acid oxidase 1
4	gene	118.9713	118.9995	positive	MGI_C57BL6J_3651891	Gm12861	ENSEMBL:ENSMUSG00000085895	MGI:3651891	lncRNA gene	predicted gene 12861
4	gene	118.9803	118.9804	positive	MGI_C57BL6J_5454129	Gm24352	ENSEMBL:ENSMUSG00000089591	MGI:5454129	snoRNA gene	predicted gene, 24352
4	pseudogene	118.9870	118.9882	positive	MGI_C57BL6J_3649273	Gm12864	NCBI_Gene:666703,ENSEMBL:ENSMUSG00000082143	MGI:3649273	pseudogene	predicted gene 12864
4	gene	118.9997	119.0005	negative	MGI_C57BL6J_3651209	Gm12862	ENSEMBL:ENSMUSG00000087464	MGI:3651209	lncRNA gene	predicted gene 12862
4	gene	119.0507	119.0620	positive	MGI_C57BL6J_5428673	Lincred2	NCBI_Gene:100996932	MGI:5428673	lncRNA gene	long intergenic non-protein coding RNA of erythroid differentiation 2
4	gene	119.0548	119.0691	negative	MGI_C57BL6J_3649462	Gm12866	NCBI_Gene:433751,ENSEMBL:ENSMUSG00000066060	MGI:3649462	lncRNA gene	predicted gene 12866
4	gene	119.0730	119.0844	positive	MGI_C57BL6J_5594669	Gm35510	NCBI_Gene:102639122	MGI:5594669	lncRNA gene	predicted gene, 35510
4	gene	119.1087	119.1380	positive	MGI_C57BL6J_95755	Slc2a1	NCBI_Gene:20525,ENSEMBL:ENSMUSG00000028645	MGI:95755	protein coding gene	solute carrier family 2 (facilitated glucose transporter), member 1
4	gene	119.1298	119.1298	positive	MGI_C57BL6J_3837121	Mir1957a	miRBase:MI0009954,ENSEMBL:ENSMUSG00000088552	MGI:3837121	miRNA gene	microRNA 1957a
4	gene	119.1303	119.1310	negative	MGI_C57BL6J_3651003	Gm12867	ENSEMBL:ENSMUSG00000086683	MGI:3651003	lncRNA gene	predicted gene 12867
4	gene	119.1337	119.1388	negative	MGI_C57BL6J_3651004	Gm12868	ENSEMBL:ENSMUSG00000085505	MGI:3651004	lncRNA gene	predicted gene 12868
4	gene	119.1695	119.1742	negative	MGI_C57BL6J_3041163	Zfp691	NCBI_Gene:195522,ENSEMBL:ENSMUSG00000045268	MGI:3041163	protein coding gene	zinc finger protein 691
4	gene	119.1755	119.1900	negative	MGI_C57BL6J_1349816	Ermap	NCBI_Gene:27028,ENSEMBL:ENSMUSG00000028644	MGI:1349816	protein coding gene	erythroblast membrane-associated protein
4	gene	119.1953	119.2013	positive	MGI_C57BL6J_1916466	Svbp	NCBI_Gene:69216,ENSEMBL:ENSMUSG00000028643	MGI:1916466	protein coding gene	small vasohibin binding protein
4	gene	119.2036	119.2328	negative	MGI_C57BL6J_2140466	AU022252	NCBI_Gene:230696,ENSEMBL:ENSMUSG00000078584	MGI:2140466	protein coding gene	expressed sequence AU022252
4	gene	119.2050	119.2186	negative	MGI_C57BL6J_1922430	Tmem269	NCBI_Gene:75180,ENSEMBL:ENSMUSG00000028642	MGI:1922430	protein coding gene	transmembrane protein 269
4	gene	119.2232	119.2248	positive	MGI_C57BL6J_3650325	Gm12898	ENSEMBL:ENSMUSG00000085626	MGI:3650325	lncRNA gene	predicted gene 12898
4	gene	119.2329	119.2490	positive	MGI_C57BL6J_1888921	P3h1	NCBI_Gene:56401,ENSEMBL:ENSMUSG00000028641	MGI:1888921	protein coding gene	prolyl 3-hydroxylase 1
4	gene	119.2525	119.2570	negative	MGI_C57BL6J_3651776	Gm12927	NCBI_Gene:102639193,ENSEMBL:ENSMUSG00000085203	MGI:3651776	lncRNA gene	predicted gene 12927
4	gene	119.2554	119.2624	positive	MGI_C57BL6J_3033992	Cldn19	NCBI_Gene:242653,ENSEMBL:ENSMUSG00000066058	MGI:3033992	protein coding gene	claudin 19
4	gene	119.2773	119.2947	negative	MGI_C57BL6J_99146	Ybx1	NCBI_Gene:22608,ENSEMBL:ENSMUSG00000028639	MGI:99146	protein coding gene	Y box protein 1
4	gene	119.2941	119.2951	positive	MGI_C57BL6J_1920791	1700102N10Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 1700102N10 gene
4	gene	119.2950	119.2955	negative	MGI_C57BL6J_5611045	Gm37817	ENSEMBL:ENSMUSG00000102819	MGI:5611045	unclassified gene	predicted gene, 37817
4	gene	119.3000	119.3205	negative	MGI_C57BL6J_106499	Ppih	NCBI_Gene:66101,ENSEMBL:ENSMUSG00000060288	MGI:106499	protein coding gene	peptidyl prolyl isomerase H
4	gene	119.3225	119.4155	negative	MGI_C57BL6J_1920582	Ccdc30	NCBI_Gene:73332,ENSEMBL:ENSMUSG00000028637	MGI:1920582	protein coding gene	coiled-coil domain containing 30
4	pseudogene	119.3339	119.3355	negative	MGI_C57BL6J_96761	Ldha-ps2	NCBI_Gene:16830,ENSEMBL:ENSMUSG00000083836	MGI:96761	pseudogene	lactate dehydrogenase A, pseudogene 2
4	gene	119.3935	119.3999	positive	MGI_C57BL6J_6324757	Gm50484	ENSEMBL:ENSMUSG00000118403	MGI:6324757	lncRNA gene	predicted gene, 50484
4	gene	119.4185	119.4224	negative	MGI_C57BL6J_1915237	Ppcs	NCBI_Gene:106564,ENSEMBL:ENSMUSG00000028636	MGI:1915237	protein coding gene	phosphopantothenoylcysteine synthetase
4	gene	119.4227	119.4674	positive	MGI_C57BL6J_2140259	Zmynd12	NCBI_Gene:332934,ENSEMBL:ENSMUSG00000070806	MGI:2140259	protein coding gene	zinc finger, MYND domain containing 12
4	gene	119.4653	119.4926	negative	MGI_C57BL6J_3040686	Rimkla	NCBI_Gene:194237,ENSEMBL:ENSMUSG00000048899	MGI:3040686	protein coding gene	ribosomal modification protein rimK-like family member A
4	pseudogene	119.5019	119.5025	negative	MGI_C57BL6J_3652229	Gm12954	ENSEMBL:ENSMUSG00000082009	MGI:3652229	pseudogene	predicted gene 12954
4	pseudogene	119.5096	119.5177	negative	MGI_C57BL6J_3652227	Gm12956	NCBI_Gene:102640085,ENSEMBL:ENSMUSG00000082814	MGI:3652227	pseudogene	predicted gene 12956
4	pseudogene	119.5191	119.5201	negative	MGI_C57BL6J_3652228	Gm12955	NCBI_Gene:666766,ENSEMBL:ENSMUSG00000080773	MGI:3652228	pseudogene	predicted gene 12955
4	pseudogene	119.5209	119.5215	positive	MGI_C57BL6J_3649304	Gm12957	NCBI_Gene:384052,ENSEMBL:ENSMUSG00000084379	MGI:3649304	pseudogene	predicted gene 12957
4	pseudogene	119.5279	119.5282	positive	MGI_C57BL6J_97991	Rnu6-ps2	NCBI_Gene:19864,ENSEMBL:ENSMUSG00000094494	MGI:97991	pseudogene	U6 small nuclear RNA, pseudogene 2
4	gene	119.5303	119.5395	negative	MGI_C57BL6J_3035485	Frg2f1	NCBI_Gene:433752,ENSEMBL:ENSMUSG00000087385	MGI:3035485	protein coding gene	FSHD region gene 2 family member 1
4	gene	119.5370	119.6291	positive	MGI_C57BL6J_2443432	Foxj3	NCBI_Gene:230700,ENSEMBL:ENSMUSG00000032998	MGI:2443432	protein coding gene	forkhead box J3
4	pseudogene	119.5537	119.5541	negative	MGI_C57BL6J_3649444	Gm12959	ENSEMBL:ENSMUSG00000081678	MGI:3649444	pseudogene	predicted gene 12959
4	gene	119.6377	119.6395	positive	MGI_C57BL6J_102738	Guca2a	NCBI_Gene:14915,ENSEMBL:ENSMUSG00000023247	MGI:102738	protein coding gene	guanylate cyclase activator 2a (guanylin)
4	gene	119.6566	119.6590	negative	MGI_C57BL6J_1270851	Guca2b	NCBI_Gene:14916,ENSEMBL:ENSMUSG00000032978	MGI:1270851	protein coding gene	guanylate cyclase activator 2b (retina)
4	gene	119.6590	119.6638	positive	MGI_C57BL6J_5594920	Gm35761	NCBI_Gene:102639449	MGI:5594920	lncRNA gene	predicted gene, 35761
4	gene	119.6957	119.7241	negative	MGI_C57BL6J_5595116	Gm35957	NCBI_Gene:102639707	MGI:5595116	lncRNA gene	predicted gene, 35957
4	gene	119.7338	120.1380	positive	MGI_C57BL6J_106589	Hivep3	NCBI_Gene:16656,ENSEMBL:ENSMUSG00000028634	MGI:106589	protein coding gene	human immunodeficiency virus type I enhancer binding protein 3
4	gene	120.0046	120.0495	negative	MGI_C57BL6J_5621517	Gm38632	NCBI_Gene:102642778	MGI:5621517	lncRNA gene	predicted gene, 38632
4	gene	120.0658	120.0747	negative	MGI_C57BL6J_5595374	Gm36215	NCBI_Gene:102640050	MGI:5595374	lncRNA gene	predicted gene, 36215
4	gene	120.1542	120.2622	negative	MGI_C57BL6J_5595293	Gm36134	NCBI_Gene:102639939	MGI:5595293	lncRNA gene	predicted gene, 36134
4	gene	120.1612	120.1674	positive	MGI_C57BL6J_95284	Edn2	NCBI_Gene:13615,ENSEMBL:ENSMUSG00000028635	MGI:95284	protein coding gene	endothelin 2
4	gene	120.1762	120.1813	positive	MGI_C57BL6J_5595232	Gm36073	NCBI_Gene:102639859	MGI:5595232	lncRNA gene	predicted gene, 36073
4	gene	120.1908	120.2003	positive	MGI_C57BL6J_5595172	Gm36013	NCBI_Gene:102639782	MGI:5595172	lncRNA gene	predicted gene, 36013
4	gene	120.2671	120.2873	negative	MGI_C57BL6J_2676586	Foxo6	NCBI_Gene:329934,ENSEMBL:ENSMUSG00000052135	MGI:2676586	protein coding gene	forkhead box O6
4	gene	120.2911	120.3039	positive	MGI_C57BL6J_3028036	Foxo6os	NCBI_Gene:402730,ENSEMBL:ENSMUSG00000084929	MGI:3028036	antisense lncRNA gene	forkhead box O6, opposite strand
4	gene	120.3097	120.3129	negative	MGI_C57BL6J_5595658	Gm36499	NCBI_Gene:102640438	MGI:5595658	lncRNA gene	predicted gene, 36499
4	gene	120.3191	120.3972	negative	MGI_C57BL6J_5595733	Gm36574	NCBI_Gene:102640537	MGI:5595733	lncRNA gene	predicted gene, 36574
4	gene	120.4053	120.5302	positive	MGI_C57BL6J_1352762	Scmh1	NCBI_Gene:29871,ENSEMBL:ENSMUSG00000000085	MGI:1352762	protein coding gene	sex comb on midleg homolog 1
4	gene	120.5321	120.5367	positive	MGI_C57BL6J_3045330	Slfnl1	NCBI_Gene:194219,ENSEMBL:ENSMUSG00000047518	MGI:3045330	protein coding gene	schlafen like 1
4	gene	120.5399	120.5703	negative	MGI_C57BL6J_1858304	Ctps	NCBI_Gene:51797,ENSEMBL:ENSMUSG00000028633	MGI:1858304	protein coding gene	cytidine 5’-triphosphate synthase
4	gene	120.5887	120.6097	positive	MGI_C57BL6J_3648581	Gm8439	NCBI_Gene:667063,ENSEMBL:ENSMUSG00000091297	MGI:3648581	protein coding gene	predicted gene 8439
4	gene	120.6158	120.6227	positive	MGI_C57BL6J_3651651	Gm12860	ENSEMBL:ENSMUSG00000086187	MGI:3651651	lncRNA gene	predicted gene 12860
4	gene	120.6442	120.6481	negative	MGI_C57BL6J_5791415	Gm45579	ENSEMBL:ENSMUSG00000110389	MGI:5791415	lncRNA gene	predicted gene 45579
4	gene	120.6596	120.6633	positive	MGI_C57BL6J_5589050	Gm29891	NCBI_Gene:102631594	MGI:5589050	lncRNA gene	predicted gene, 29891
4	gene	120.6666	120.6678	positive	MGI_C57BL6J_1861694	Cited4	NCBI_Gene:56222,ENSEMBL:ENSMUSG00000070803	MGI:1861694	protein coding gene	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4
4	gene	120.6961	120.7486	negative	MGI_C57BL6J_1926803	Kcnq4	NCBI_Gene:60613,ENSEMBL:ENSMUSG00000028631	MGI:1926803	protein coding gene	potassium voltage-gated channel, subfamily Q, member 4
4	gene	120.7574	120.8316	negative	MGI_C57BL6J_107901	Nfyc	NCBI_Gene:18046,ENSEMBL:ENSMUSG00000032897	MGI:107901	protein coding gene	nuclear transcription factor-Y gamma
4	gene	120.7695	120.7696	negative	MGI_C57BL6J_2676909	Mir30c-1	miRBase:MI0000547,NCBI_Gene:387227,ENSEMBL:ENSMUSG00000065490	MGI:2676909	miRNA gene	microRNA 30c-1
4	gene	120.7726	120.7727	positive	MGI_C57BL6J_5562761	Mir30f	miRBase:MI0021961,NCBI_Gene:102466650,ENSEMBL:ENSMUSG00000105585	MGI:5562761	miRNA gene	microRNA 30f
4	gene	120.7726	120.7727	negative	MGI_C57BL6J_3619329	Mir30e	miRBase:MI0000259,NCBI_Gene:723836,ENSEMBL:ENSMUSG00000065409	MGI:3619329	miRNA gene	microRNA 30e
4	gene	120.8375	120.8376	positive	MGI_C57BL6J_5453713	Gm23936	ENSEMBL:ENSMUSG00000096876	MGI:5453713	miRNA gene	predicted gene, 23936
4	gene	120.8548	120.8966	positive	MGI_C57BL6J_2443331	Rims3	NCBI_Gene:242662,ENSEMBL:ENSMUSG00000032890	MGI:2443331	protein coding gene	regulating synaptic membrane exocytosis 3
4	pseudogene	120.9011	120.9028	positive	MGI_C57BL6J_3649219	Gm12871	NCBI_Gene:102631670,ENSEMBL:ENSMUSG00000082200	MGI:3649219	pseudogene	predicted gene 12871
4	gene	120.9035	120.9036	positive	MGI_C57BL6J_5454455	Gm24678	ENSEMBL:ENSMUSG00000089381	MGI:5454455	snRNA gene	predicted gene, 24678
4	gene	120.9212	120.9250	negative	MGI_C57BL6J_1920422	Exo5	NCBI_Gene:73172,ENSEMBL:ENSMUSG00000028629	MGI:1920422	protein coding gene	exonuclease 5
4	gene	120.9301	120.9534	negative	MGI_C57BL6J_107794	Zfp69	NCBI_Gene:381549,ENSEMBL:ENSMUSG00000064141	MGI:107794	protein coding gene	zinc finger protein 69
4	gene	120.9683	121.0173	negative	MGI_C57BL6J_1917030	Smap2	NCBI_Gene:69780,ENSEMBL:ENSMUSG00000032870	MGI:1917030	protein coding gene	small ArfGAP 2
4	gene	120.9733	120.9733	negative	MGI_C57BL6J_5562762	Mir7015	miRBase:MI0022864,NCBI_Gene:102465614,ENSEMBL:ENSMUSG00000106436	MGI:5562762	miRNA gene	microRNA 7015
4	gene	121.0394	121.0553	positive	MGI_C57BL6J_88466	Col9a2	NCBI_Gene:12840,ENSEMBL:ENSMUSG00000028626	MGI:88466	protein coding gene	collagen, type IX, alpha 2
4	gene	121.0592	121.0982	negative	MGI_C57BL6J_1890508	Zmpste24	NCBI_Gene:230709,ENSEMBL:ENSMUSG00000043207	MGI:1890508	protein coding gene	zinc metallopeptidase, STE24
4	gene	121.0758	121.0759	negative	MGI_C57BL6J_5455963	Gm26186	ENSEMBL:ENSMUSG00000088314	MGI:5455963	snoRNA gene	predicted gene, 26186
4	gene	121.0840	121.0841	negative	MGI_C57BL6J_5453317	Gm23540	ENSEMBL:ENSMUSG00000088168	MGI:5453317	snRNA gene	predicted gene, 23540
4	gene	121.1057	121.1092	negative	MGI_C57BL6J_1916719	Tmco2	NCBI_Gene:69469,ENSEMBL:ENSMUSG00000078577	MGI:1916719	protein coding gene	transmembrane and coiled-coil domains 2
4	pseudogene	121.1148	121.1153	negative	MGI_C57BL6J_3651897	Gm12882	NCBI_Gene:100042174,ENSEMBL:ENSMUSG00000081423	MGI:3651897	pseudogene	predicted gene 12882
4	pseudogene	121.1209	121.1302	negative	MGI_C57BL6J_3651892	Gm12881	NCBI_Gene:102640296,ENSEMBL:ENSMUSG00000082891	MGI:3651892	pseudogene	predicted gene 12881
4	pseudogene	121.1301	121.1313	positive	MGI_C57BL6J_3649632	Gm12879	ENSEMBL:ENSMUSG00000081305	MGI:3649632	pseudogene	predicted gene 12879
4	gene	121.1347	121.1350	positive	MGI_C57BL6J_5452759	Gm22982	ENSEMBL:ENSMUSG00000064547	MGI:5452759	unclassified non-coding RNA gene	predicted gene, 22982
4	gene	121.1454	121.2151	negative	MGI_C57BL6J_1924705	Rlf	NCBI_Gene:109263,ENSEMBL:ENSMUSG00000049878	MGI:1924705	protein coding gene	rearranged L-myc fusion sequence
4	pseudogene	121.2271	121.2275	negative	MGI_C57BL6J_3652134	Gm12890	ENSEMBL:ENSMUSG00000080706	MGI:3652134	pseudogene	predicted gene 12890
4	gene	121.2309	121.2392	positive	MGI_C57BL6J_5589261	Gm30102	NCBI_Gene:102631880	MGI:5589261	lncRNA gene	predicted gene, 30102
4	gene	121.2357	121.2415	negative	MGI_C57BL6J_5623124	Gm40239	NCBI_Gene:105244675	MGI:5623124	lncRNA gene	predicted gene, 40239
4	gene	121.3163	121.3249	negative	MGI_C57BL6J_3652130	Gm12888	NCBI_Gene:545677,ENSEMBL:ENSMUSG00000073764	MGI:3652130	protein coding gene	predicted gene 12888
4	pseudogene	121.3798	121.3800	positive	MGI_C57BL6J_3652132	Gm12889	ENSEMBL:ENSMUSG00000083941	MGI:3652132	pseudogene	predicted gene 12889
4	pseudogene	121.3806	121.3809	positive	MGI_C57BL6J_3651896	Gm12885	ENSEMBL:ENSMUSG00000083901	MGI:3651896	pseudogene	predicted gene 12885
4	pseudogene	121.3814	121.3818	positive	MGI_C57BL6J_3651895	Gm12884	ENSEMBL:ENSMUSG00000081465	MGI:3651895	pseudogene	predicted gene 12884
4	pseudogene	121.3930	121.3966	positive	MGI_C57BL6J_3651898	Gm12883	ENSEMBL:ENSMUSG00000081667	MGI:3651898	pseudogene	predicted gene 12883
4	gene	121.3942	121.3966	negative	MGI_C57BL6J_3648197	Gm8359	NCBI_Gene:666914	MGI:3648197	protein coding gene	predicted gene 8359
4	gene	121.4147	121.4231	negative	MGI_C57BL6J_3651888	Gm12886	NCBI_Gene:666921,ENSEMBL:ENSMUSG00000078576	MGI:3651888	protein coding gene	predicted gene 12886
4	pseudogene	121.4768	121.5828	negative	MGI_C57BL6J_3651893	Gm12880	NCBI_Gene:100504652,ENSEMBL:ENSMUSG00000082821	MGI:3651893	pseudogene	predicted gene 12880
4	gene	121.5095	121.5096	positive	MGI_C57BL6J_5455939	Gm26162	ENSEMBL:ENSMUSG00000088418	MGI:5455939	snoRNA gene	predicted gene, 26162
4	gene	121.6140	121.6221	negative	MGI_C57BL6J_3652131	Gm12887	NCBI_Gene:666927,ENSEMBL:ENSMUSG00000078575	MGI:3652131	protein coding gene	predicted gene 12887
4	pseudogene	121.6414	121.6418	positive	MGI_C57BL6J_3649631	Gm12878	ENSEMBL:ENSMUSG00000083615	MGI:3649631	pseudogene	predicted gene 12878
4	gene	121.9079	121.9208	negative	MGI_C57BL6J_5434759	Gm21404	NCBI_Gene:100862019	MGI:5434759	protein coding gene	predicted gene, 21404
4	pseudogene	122.0081	122.0096	positive	MGI_C57BL6J_3649649	Gm12892	NCBI_Gene:666937,ENSEMBL:ENSMUSG00000083679	MGI:3649649	pseudogene	predicted gene 12892
4	pseudogene	122.1228	122.1231	positive	MGI_C57BL6J_3650312	Gm12896	ENSEMBL:ENSMUSG00000083558	MGI:3650312	pseudogene	predicted gene 12896
4	pseudogene	122.1877	122.2067	positive	MGI_C57BL6J_3649906	Gm12897	NCBI_Gene:102632107,ENSEMBL:ENSMUSG00000083949	MGI:3649906	pseudogene	predicted gene 12897
4	pseudogene	122.2350	122.2359	positive	MGI_C57BL6J_3652102	Gm12893	ENSEMBL:ENSMUSG00000083867	MGI:3652102	pseudogene	predicted gene 12893
4	gene	122.3009	122.3138	negative	MGI_C57BL6J_3649909	Gm10573	NCBI_Gene:666931	MGI:3649909	protein coding gene	predicted gene 10573
4	pseudogene	122.4552	122.4554	positive	MGI_C57BL6J_3649907	Gm12895	ENSEMBL:ENSMUSG00000083365	MGI:3649907	pseudogene	predicted gene 12895
4	gene	122.5202	122.5392	positive	MGI_C57BL6J_5589564	Gm30405	NCBI_Gene:102632293	MGI:5589564	lncRNA gene	predicted gene, 30405
4	pseudogene	122.5827	122.6049	negative	MGI_C57BL6J_3650567	Gm12877	ENSEMBL:ENSMUSG00000081377	MGI:3650567	pseudogene	predicted gene 12877
4	pseudogene	122.5930	122.5941	positive	MGI_C57BL6J_3651901	Gm12874	NCBI_Gene:100504420,ENSEMBL:ENSMUSG00000084196	MGI:3651901	pseudogene	predicted gene 12874
4	pseudogene	122.6403	122.6483	negative	MGI_C57BL6J_3649744	Gm12875	ENSEMBL:ENSMUSG00000080871	MGI:3649744	pseudogene	predicted gene 12875
4	pseudogene	122.6609	122.6773	negative	MGI_C57BL6J_3651904	Gm12876	ENSEMBL:ENSMUSG00000083109	MGI:3651904	pseudogene	predicted gene 12876
4	gene	122.6893	122.7051	positive	MGI_C57BL6J_1924682	9530002B09Rik	NCBI_Gene:77432,ENSEMBL:ENSMUSG00000023263	MGI:1924682	protein coding gene	RIKEN cDNA 9530002B09 gene
4	gene	122.7265	122.7395	negative	MGI_C57BL6J_5589707	Gm30548	NCBI_Gene:102632489	MGI:5589707	lncRNA gene	predicted gene, 30548
4	pseudogene	122.7303	122.7347	negative	MGI_C57BL6J_3649389	Gm12872	ENSEMBL:ENSMUSG00000084082	MGI:3649389	pseudogene	predicted gene 12872
4	pseudogene	122.7715	122.7938	negative	MGI_C57BL6J_3651900	Gm12873	NCBI_Gene:102632555,ENSEMBL:ENSMUSG00000083494	MGI:3651900	pseudogene	predicted gene 12873
4	gene	122.8361	122.8592	positive	MGI_C57BL6J_1298204	Ppt1	NCBI_Gene:19063,ENSEMBL:ENSMUSG00000028657	MGI:1298204	protein coding gene	palmitoyl-protein thioesterase 1
4	gene	122.8590	122.8861	negative	MGI_C57BL6J_88262	Cap1	NCBI_Gene:12331,ENSEMBL:ENSMUSG00000028656	MGI:88262	protein coding gene	CAP, adenylate cyclase-associated protein 1 (yeast)
4	pseudogene	122.9258	122.9262	positive	MGI_C57BL6J_3649646	Gm12891	NCBI_Gene:102632907,ENSEMBL:ENSMUSG00000080929	MGI:3649646	pseudogene	predicted gene 12891
4	gene	122.9468	122.9612	negative	MGI_C57BL6J_1923824	Mfsd2a	NCBI_Gene:76574,ENSEMBL:ENSMUSG00000028655	MGI:1923824	protein coding gene	major facilitator superfamily domain containing 2A
4	gene	122.9613	122.9635	positive	MGI_C57BL6J_1918347	4933421A08Rik	ENSEMBL:ENSMUSG00000086443	MGI:1918347	lncRNA gene	RIKEN cDNA 4933421A08 gene
4	gene	122.9956	123.0025	positive	MGI_C57BL6J_96799	Mycl	NCBI_Gene:16918,ENSEMBL:ENSMUSG00000028654	MGI:96799	protein coding gene	v-myc avian myelocytomatosis viral oncogene lung carcinoma derived
4	gene	123.0165	123.0549	positive	MGI_C57BL6J_1914216	Trit1	NCBI_Gene:66966,ENSEMBL:ENSMUSG00000028653	MGI:1914216	protein coding gene	tRNA isopentenyltransferase 1
4	gene	123.0812	123.0894	positive	MGI_C57BL6J_5826505	Gm46868	NCBI_Gene:108168975	MGI:5826505	lncRNA gene	predicted gene, 46868
4	gene	123.0812	123.0940	negative	MGI_C57BL6J_3651539	Gm12923	NCBI_Gene:105244676,ENSEMBL:ENSMUSG00000086153	MGI:3651539	lncRNA gene	predicted gene 12923
4	gene	123.1043	123.1321	positive	MGI_C57BL6J_107335	Bmp8b	NCBI_Gene:12164,ENSEMBL:ENSMUSG00000002384	MGI:107335	protein coding gene	bone morphogenetic protein 8b
4	gene	123.1133	123.1168	negative	MGI_C57BL6J_4936878	Gm17244	ENSEMBL:ENSMUSG00000102997	MGI:4936878	unclassified gene	predicted gene, 17244
4	gene	123.1162	123.1180	positive	MGI_C57BL6J_2664115	Oxct2b	NCBI_Gene:353371,ENSEMBL:ENSMUSG00000076438	MGI:2664115	protein coding gene	3-oxoacid CoA transferase 2B
4	gene	123.1271	123.1400	negative	MGI_C57BL6J_1917118	Ppie	NCBI_Gene:56031,ENSEMBL:ENSMUSG00000028651	MGI:1917118	protein coding gene	peptidylprolyl isomerase E (cyclophilin E)
4	gene	123.1832	123.1947	positive	MGI_C57BL6J_2157521	Hpcal4	NCBI_Gene:170638,ENSEMBL:ENSMUSG00000046093	MGI:2157521	protein coding gene	hippocalcin-like 4
4	gene	123.2012	123.2253	positive	MGI_C57BL6J_2155700	Nt5c1a	NCBI_Gene:230718,ENSEMBL:ENSMUSG00000054958	MGI:2155700	protein coding gene	5’-nucleotidase, cytosolic IA
4	gene	123.2336	123.2499	positive	MGI_C57BL6J_1860511	Heyl	NCBI_Gene:56198,ENSEMBL:ENSMUSG00000032744	MGI:1860511	protein coding gene	hairy/enhancer-of-split related with YRPW motif-like
4	pseudogene	123.2580	123.2589	positive	MGI_C57BL6J_3650176	Gm12901	NCBI_Gene:194197,ENSEMBL:ENSMUSG00000083720	MGI:3650176	pseudogene	predicted gene 12901
4	gene	123.2624	123.2989	positive	MGI_C57BL6J_2385206	Pabpc4	NCBI_Gene:230721,ENSEMBL:ENSMUSG00000011257	MGI:2385206	protein coding gene	poly(A) binding protein, cytoplasmic 4
4	pseudogene	123.2749	123.2755	negative	MGI_C57BL6J_3650387	Gm12900	NCBI_Gene:622334,ENSEMBL:ENSMUSG00000082634	MGI:3650387	pseudogene	predicted gene 12900
4	gene	123.2913	123.2915	positive	MGI_C57BL6J_5455565	Gm25788	ENSEMBL:ENSMUSG00000064655	MGI:5455565	snoRNA gene	predicted gene, 25788
4	gene	123.2932	123.2933	positive	MGI_C57BL6J_5451931	Gm22154	ENSEMBL:ENSMUSG00000065778	MGI:5451931	snoRNA gene	predicted gene, 22154
4	gene	123.3126	123.3433	negative	MGI_C57BL6J_104515	Bmp8a	NCBI_Gene:12163,ENSEMBL:ENSMUSG00000032726	MGI:104515	protein coding gene	bone morphogenetic protein 8a
4	gene	123.3219	123.3237	negative	MGI_C57BL6J_1891061	Oxct2a	NCBI_Gene:64059,ENSEMBL:ENSMUSG00000076436	MGI:1891061	protein coding gene	3-oxoacid CoA transferase 2A
4	gene	123.3496	123.6844	negative	MGI_C57BL6J_108559	Macf1	NCBI_Gene:11426,ENSEMBL:ENSMUSG00000028649	MGI:108559	protein coding gene	microtubule-actin crosslinking factor 1
4	gene	123.4036	123.4119	negative	MGI_C57BL6J_3045367	D830031N03Rik	NCBI_Gene:442834	MGI:3045367	protein coding gene	RIKEN cDNA D830031N03 gene
4	pseudogene	123.4352	123.4364	positive	MGI_C57BL6J_3651538	Gm12924	NCBI_Gene:102633376,ENSEMBL:ENSMUSG00000081528	MGI:3651538	pseudogene	predicted gene 12924
4	gene	123.4902	123.4903	positive	MGI_C57BL6J_5453325	Gm23548	ENSEMBL:ENSMUSG00000089588	MGI:5453325	unclassified non-coding RNA gene	predicted gene, 23548
4	gene	123.5504	123.5570	positive	MGI_C57BL6J_5590315	Gm31156	NCBI_Gene:102633296	MGI:5590315	lncRNA gene	predicted gene, 31156
4	gene	123.6164	123.6165	positive	MGI_C57BL6J_5531039	Mir6398	miRBase:MI0021934,NCBI_Gene:102465214,ENSEMBL:ENSMUSG00000099005	MGI:5531039	miRNA gene	microRNA 6398
4	pseudogene	123.6303	123.6307	positive	MGI_C57BL6J_3651535	Gm12926	ENSEMBL:ENSMUSG00000081585	MGI:3651535	pseudogene	predicted gene 12926
4	pseudogene	123.6446	123.6479	negative	MGI_C57BL6J_5594400	Gm35241	NCBI_Gene:102638752	MGI:5594400	pseudogene	predicted gene, 35241
4	gene	123.6659	123.6712	positive	MGI_C57BL6J_3651536	Gm12925	NCBI_Gene:102633214,ENSEMBL:ENSMUSG00000087307	MGI:3651536	lncRNA gene	predicted gene 12925
4	pseudogene	123.7092	123.7101	negative	MGI_C57BL6J_3651537	Gm12922	NCBI_Gene:100039110,ENSEMBL:ENSMUSG00000081170	MGI:3651537	pseudogene	predicted gene 12922
4	gene	123.7127	123.7182	negative	MGI_C57BL6J_1890889	Ndufs5	NCBI_Gene:595136,ENSEMBL:ENSMUSG00000028648	MGI:1890889	protein coding gene	NADH:ubiquinone oxidoreductase core subunit S5
4	gene	123.7346	123.7503	negative	MGI_C57BL6J_1915300	Akirin1	NCBI_Gene:68050,ENSEMBL:ENSMUSG00000023075	MGI:1915300	protein coding gene	akirin 1
4	gene	123.7879	123.8302	positive	MGI_C57BL6J_3608413	Rhbdl2	NCBI_Gene:230726,ENSEMBL:ENSMUSG00000043333	MGI:3608413	protein coding gene	rhomboid like 2
4	gene	123.8336	123.8595	negative	MGI_C57BL6J_1925891	1700121C08Rik	NCBI_Gene:105244677,ENSEMBL:ENSMUSG00000086275	MGI:1925891	lncRNA gene	RIKEN cDNA 1700121C08 gene
4	pseudogene	123.8381	123.8395	positive	MGI_C57BL6J_3650403	Gm12904	NCBI_Gene:667064,ENSEMBL:ENSMUSG00000082310	MGI:3650403	pseudogene	predicted gene 12904
4	pseudogene	123.8460	123.8495	negative	MGI_C57BL6J_5826497	Gm46860	NCBI_Gene:108168958	MGI:5826497	pseudogene	predicted gene, 46860
4	gene	123.8597	123.8632	positive	MGI_C57BL6J_3613760	4933427I04Rik	ENSEMBL:ENSMUSG00000073761	MGI:3613760	protein coding gene	Riken cDNA 4933427I04 gene
4	gene	123.8772	123.8806	positive	MGI_C57BL6J_5590468	Gm31309	NCBI_Gene:102633498	MGI:5590468	protein coding gene	predicted gene, 31309
4	gene	123.8953	123.8966	negative	MGI_C57BL6J_3642540	Gm10572	NA	NA	unclassified gene	predicted gene 10572
4	gene	123.8979	123.9012	negative	MGI_C57BL6J_5623125	Gm40240	NCBI_Gene:105244678	MGI:5623125	lncRNA gene	predicted gene, 40240
4	gene	123.8986	123.9048	negative	MGI_C57BL6J_5477100	Gm26606	ENSEMBL:ENSMUSG00000097337	MGI:5477100	lncRNA gene	predicted gene, 26606
4	pseudogene	123.9021	123.9050	negative	MGI_C57BL6J_3045257	D130007C19Rik	NCBI_Gene:442805,ENSEMBL:ENSMUSG00000054304	MGI:3045257	pseudogene	RIKEN cDNA D130007C19 gene
4	pseudogene	123.9024	123.9030	positive	MGI_C57BL6J_3650402	Gm12903	ENSEMBL:ENSMUSG00000080993	MGI:3650402	pseudogene	predicted gene 12903
4	gene	123.9048	123.9123	positive	MGI_C57BL6J_1891750	Mycbp	NCBI_Gene:56309,ENSEMBL:ENSMUSG00000028647	MGI:1891750	protein coding gene	MYC binding protein
4	gene	123.9051	123.9180	negative	MGI_C57BL6J_3702581	Gm12905	ENSEMBL:ENSMUSG00000085875	MGI:3702581	lncRNA gene	predicted gene 12905
4	gene	123.9153	123.9180	negative	MGI_C57BL6J_1922470	4930535I16Rik	NA	NA	protein coding gene	RIKEN cDNA 4930535I16 gene
4	gene	123.9174	123.9370	positive	MGI_C57BL6J_1858751	Rragc	NCBI_Gene:54170,ENSEMBL:ENSMUSG00000028646	MGI:1858751	protein coding gene	Ras-related GTP binding C
4	pseudogene	123.9262	123.9266	positive	MGI_C57BL6J_3650399	Gm12902	ENSEMBL:ENSMUSG00000082515	MGI:3650399	pseudogene	predicted gene 12902
4	gene	124.0540	124.0701	positive	MGI_C57BL6J_5623126	Gm40241	NCBI_Gene:105244679	MGI:5623126	lncRNA gene	predicted gene, 40241
4	gene	124.2714	124.2724	negative	MGI_C57BL6J_5623127	Gm40242	NCBI_Gene:105244680	MGI:5623127	lncRNA gene	predicted gene, 40242
4	gene	124.2778	124.2792	negative	MGI_C57BL6J_5610895	Gm37667	ENSEMBL:ENSMUSG00000103541	MGI:5610895	unclassified gene	predicted gene, 37667
4	gene	124.2931	124.2999	negative	MGI_C57BL6J_3649992	Gm12916	NCBI_Gene:102633918,ENSEMBL:ENSMUSG00000086087	MGI:3649992	lncRNA gene	predicted gene 12916
4	gene	124.3028	124.3327	negative	MGI_C57BL6J_1923660	1700021L23Rik	NCBI_Gene:76410,ENSEMBL:ENSMUSG00000086955	MGI:1923660	lncRNA gene	RIKEN cDNA 1700021L23 gene
4	gene	124.3263	124.3325	negative	MGI_C57BL6J_1918570	4933435F18Rik	ENSEMBL:ENSMUSG00000086978	MGI:1918570	lncRNA gene	RIKEN cDNA 4933435F18 gene
4	gene	124.3356	124.3357	negative	MGI_C57BL6J_5452760	Gm22983	ENSEMBL:ENSMUSG00000088933	MGI:5452760	snRNA gene	predicted gene, 22983
4	gene	124.4144	124.4860	negative	MGI_C57BL6J_1925710	1700057H15Rik	NCBI_Gene:78460,ENSEMBL:ENSMUSG00000084757	MGI:1925710	lncRNA gene	RIKEN cDNA 1700057H15 gene
4	gene	124.4514	124.4564	positive	MGI_C57BL6J_5590989	Gm31830	NCBI_Gene:102634185	MGI:5590989	lncRNA gene	predicted gene, 31830
4	gene	124.4653	124.4681	negative	MGI_C57BL6J_5590928	Gm31769	NCBI_Gene:102634107	MGI:5590928	lncRNA gene	predicted gene, 31769
4	gene	124.5229	124.6575	negative	MGI_C57BL6J_3780334	Gm2164	NCBI_Gene:100039332,ENSEMBL:ENSMUSG00000098760	MGI:3780334	lncRNA gene	predicted gene 2164
4	gene	124.5692	124.5755	positive	MGI_C57BL6J_1918352	4933407E24Rik	NCBI_Gene:108809,ENSEMBL:ENSMUSG00000073759	MGI:1918352	lncRNA gene	RIKEN cDNA 4933407E24 gene
4	gene	124.6099	124.6108	negative	MGI_C57BL6J_1917499	3100002H09Rik	NA	NA	lncRNA gene	RIKEN cDNA 3100002H09 gene
4	gene	124.6399	124.6408	positive	MGI_C57BL6J_1915732	1110007E10Rik	NA	NA	unclassified gene	RIKEN cDNA 1110007E10 gene
4	gene	124.6568	124.6607	positive	MGI_C57BL6J_101896	Pou3f1	NCBI_Gene:18991,ENSEMBL:ENSMUSG00000090125	MGI:101896	protein coding gene	POU domain, class 3, transcription factor 1
4	gene	124.6643	124.6687	negative	MGI_C57BL6J_5621430	Gm38545	NCBI_Gene:102641270	MGI:5621430	lncRNA gene	predicted gene, 38545
4	gene	124.6782	124.6936	negative	MGI_C57BL6J_1914455	Utp11	NCBI_Gene:67205,ENSEMBL:ENSMUSG00000028907	MGI:1914455	protein coding gene	UTP11 small subunit processome component
4	gene	124.6960	124.7086	positive	MGI_C57BL6J_1341092	Fhl3	NCBI_Gene:14201,ENSEMBL:ENSMUSG00000032643	MGI:1341092	protein coding gene	four and a half LIM domains 3
4	gene	124.6975	124.6976	negative	MGI_C57BL6J_5454257	Gm24480	ENSEMBL:ENSMUSG00000088067	MGI:5454257	snRNA gene	predicted gene, 24480
4	gene	124.7148	124.7325	positive	MGI_C57BL6J_1922312	Sf3a3	NCBI_Gene:75062,ENSEMBL:ENSMUSG00000028902	MGI:1922312	protein coding gene	splicing factor 3a, subunit 3
4	pseudogene	124.7190	124.7196	positive	MGI_C57BL6J_3652006	Gm12917	NCBI_Gene:664991,ENSEMBL:ENSMUSG00000083104	MGI:3652006	pseudogene	predicted gene 12917
4	gene	124.7317	124.7318	positive	MGI_C57BL6J_3629652	Mir697	miRBase:MI0004681,NCBI_Gene:735277,ENSEMBL:ENSMUSG00000076271	MGI:3629652	miRNA gene	microRNA 697
4	gene	124.7353	124.7514	negative	MGI_C57BL6J_3650273	Gm12915	NCBI_Gene:102634646,ENSEMBL:ENSMUSG00000086589	MGI:3650273	lncRNA gene	predicted gene 12915
4	gene	124.7358	124.7359	positive	MGI_C57BL6J_5454498	Gm24721	ENSEMBL:ENSMUSG00000096411	MGI:5454498	miRNA gene	predicted gene, 24721
4	gene	124.7374	124.7401	positive	MGI_C57BL6J_5591276	Gm32117	NCBI_Gene:102634569	MGI:5591276	lncRNA gene	predicted gene, 32117
4	gene	124.7418	124.8015	positive	MGI_C57BL6J_103257	Inpp5b	NCBI_Gene:16330,ENSEMBL:ENSMUSG00000028894	MGI:103257	protein coding gene	inositol polyphosphate-5-phosphatase B
4	gene	124.7438	124.7439	positive	MGI_C57BL6J_3629653	Mir698	miRBase:MI0004682,NCBI_Gene:735263,ENSEMBL:ENSMUSG00000076119	MGI:3629653	miRNA gene	microRNA 698
4	gene	124.8021	124.8498	positive	MGI_C57BL6J_101786	Mtf1	NCBI_Gene:17764,ENSEMBL:ENSMUSG00000028890	MGI:101786	protein coding gene	metal response element binding transcription factor 1
4	gene	124.8208	124.8209	positive	MGI_C57BL6J_4422057	n-R5s192	ENSEMBL:ENSMUSG00000084526	MGI:4422057	rRNA gene	nuclear encoded rRNA 5S 192
4	gene	124.8491	124.8512	negative	MGI_C57BL6J_1916170	1110065P20Rik	NCBI_Gene:68920,ENSEMBL:ENSMUSG00000078570	MGI:1916170	protein coding gene	RIKEN cDNA 1110065P20 gene
4	gene	124.8507	124.8552	positive	MGI_C57BL6J_2387201	Yrdc	NCBI_Gene:230734,ENSEMBL:ENSMUSG00000028889	MGI:2387201	protein coding gene	yrdC domain containing (E.coli)
4	gene	124.8552	124.8809	negative	MGI_C57BL6J_2684896	Maneal	NCBI_Gene:215090,ENSEMBL:ENSMUSG00000042763	MGI:2684896	protein coding gene	mannosidase, endo-alpha-like
4	gene	124.8809	124.9178	positive	MGI_C57BL6J_3586824	Epha10	NCBI_Gene:230735,ENSEMBL:ENSMUSG00000028876	MGI:3586824	protein coding gene	Eph receptor A10
4	gene	124.8909	124.8948	negative	MGI_C57BL6J_1920878	1700125G02Rik	NCBI_Gene:73628,ENSEMBL:ENSMUSG00000085263	MGI:1920878	lncRNA gene	RIKEN cDNA 1700125G02 gene
4	gene	124.9185	124.9393	negative	MGI_C57BL6J_1196274	Cdca8	NCBI_Gene:52276,ENSEMBL:ENSMUSG00000028873	MGI:1196274	protein coding gene	cell division cycle associated 8
4	gene	124.9370	124.9447	positive	MGI_C57BL6J_3041172	9930104L06Rik	NCBI_Gene:194268,ENSEMBL:ENSMUSG00000044730	MGI:3041172	protein coding gene	RIKEN cDNA 9930104L06 gene
4	gene	124.9457	124.9628	positive	MGI_C57BL6J_5623128	Gm40243	NCBI_Gene:105244681	MGI:5623128	lncRNA gene	predicted gene, 40243
4	gene	124.9576	124.9870	negative	MGI_C57BL6J_3650529	Gm12930	ENSEMBL:ENSMUSG00000087011	MGI:3650529	lncRNA gene	predicted gene 12930
4	gene	124.9676	124.9746	negative	MGI_C57BL6J_5591530	Gm32371	NCBI_Gene:102634896	MGI:5591530	lncRNA gene	predicted gene, 32371
4	gene	124.9864	125.0091	positive	MGI_C57BL6J_2183426	Rspo1	NCBI_Gene:192199,ENSEMBL:ENSMUSG00000028871	MGI:2183426	protein coding gene	R-spondin 1
4	gene	125.0166	125.0554	positive	MGI_C57BL6J_2385207	Gnl2	NCBI_Gene:230737,ENSEMBL:ENSMUSG00000028869	MGI:2385207	protein coding gene	guanine nucleotide binding protein-like 2 (nucleolar)
4	gene	125.0177	125.0210	positive	MGI_C57BL6J_5621357	Gm38472	NCBI_Gene:102635036	MGI:5621357	lncRNA gene	predicted gene, 38472
4	pseudogene	125.0195	125.0198	positive	MGI_C57BL6J_3650713	Gm12931	ENSEMBL:ENSMUSG00000080934	MGI:3650713	pseudogene	predicted gene 12931
4	gene	125.0553	125.0657	negative	MGI_C57BL6J_1922813	Dnali1	NCBI_Gene:75563,ENSEMBL:ENSMUSG00000042707	MGI:1922813	protein coding gene	dynein, axonemal, light intermediate polypeptide 1
4	gene	125.0667	125.0741	positive	MGI_C57BL6J_2156003	Snip1	NCBI_Gene:76793,ENSEMBL:ENSMUSG00000050213	MGI:2156003	protein coding gene	Smad nuclear interacting protein 1
4	pseudogene	125.0755	125.0765	positive	MGI_C57BL6J_5010665	Gm18480	NCBI_Gene:100417248	MGI:5010665	pseudogene	predicted gene, 18480
4	gene	125.0829	125.0849	negative	MGI_C57BL6J_3651151	Gm12932	ENSEMBL:ENSMUSG00000086342	MGI:3651151	lncRNA gene	predicted gene 12932
4	gene	125.0851	125.1132	positive	MGI_C57BL6J_1917338	Meaf6	NCBI_Gene:70088,ENSEMBL:ENSMUSG00000028863	MGI:1917338	protein coding gene	MYST/Esa1-associated factor 6
4	gene	125.1184	125.1279	negative	MGI_C57BL6J_2385891	Zc3h12a	NCBI_Gene:230738,ENSEMBL:ENSMUSG00000042677	MGI:2385891	protein coding gene	zinc finger CCCH type containing 12A
4	gene	125.1375	125.1477	negative	MGI_C57BL6J_5623131	Gm40246	NCBI_Gene:105244684	MGI:5623131	lncRNA gene	predicted gene, 40246
4	gene	125.1452	125.2904	positive	MGI_C57BL6J_5591770	Gm32611	NCBI_Gene:102635216	MGI:5591770	protein coding gene	predicted gene, 32611
4	gene	125.1500	125.1871	positive	MGI_C57BL6J_5623130	Gm40245	NCBI_Gene:105244683	MGI:5623130	lncRNA gene	predicted gene, 40245
4	gene	125.2184	125.2199	positive	MGI_C57BL6J_5623129	Gm40244	NCBI_Gene:105244682	MGI:5623129	lncRNA gene	predicted gene, 40244
4	gene	125.2286	125.2421	positive	MGI_C57BL6J_1920510	1700041M05Rik	ENSEMBL:ENSMUSG00000087010	MGI:1920510	lncRNA gene	RIKEN cDNA 1700041M05 gene
4	gene	125.2905	125.3015	positive	MGI_C57BL6J_5826506	Gm46869	NCBI_Gene:108168977	MGI:5826506	lncRNA gene	predicted gene, 46869
4	gene	125.3123	125.3135	negative	MGI_C57BL6J_5591855	Gm32696	NCBI_Gene:102635326	MGI:5591855	lncRNA gene	predicted gene, 32696
4	gene	125.3817	125.3945	positive	MGI_C57BL6J_5623132	Gm40247	NCBI_Gene:105244685	MGI:5623132	lncRNA gene	predicted gene, 40247
4	gene	125.4511	125.4772	positive	MGI_C57BL6J_5591915	Gm32756	NCBI_Gene:102635406	MGI:5591915	lncRNA gene	predicted gene, 32756
4	gene	125.4902	125.7142	positive	MGI_C57BL6J_95816	Grik3	NCBI_Gene:14807,ENSEMBL:ENSMUSG00000001985	MGI:95816	protein coding gene	glutamate receptor, ionotropic, kainate 3
4	pseudogene	125.5041	125.5050	positive	MGI_C57BL6J_95590	Ftl2-ps	NCBI_Gene:14337,ENSEMBL:ENSMUSG00000082062	MGI:95590	pseudogene	ferritin light polypeptide 2, pseudogene
4	gene	125.5047	125.5049	positive	MGI_C57BL6J_3629654	Mir692-2	NCBI_Gene:735288,ENSEMBL:ENSMUSG00000094403	MGI:3629654	miRNA gene	microRNA 692-2
4	gene	125.5502	125.5561	negative	MGI_C57BL6J_5591966	Gm32807	NCBI_Gene:102635479	MGI:5591966	lncRNA gene	predicted gene, 32807
4	gene	125.8297	125.8368	negative	MGI_C57BL6J_5623134	Gm40249	NCBI_Gene:105244687	MGI:5623134	lncRNA gene	predicted gene, 40249
4	gene	125.8879	125.9224	negative	MGI_C57BL6J_1919645	2610028E06Rik	NCBI_Gene:72395,ENSEMBL:ENSMUSG00000085562	MGI:1919645	lncRNA gene	RIKEN cDNA 2610028E06 gene
4	gene	126.0112	126.0245	negative	MGI_C57BL6J_5592067	Gm32908	NCBI_Gene:102635619	MGI:5592067	lncRNA gene	predicted gene, 32908
4	gene	126.0234	126.0450	positive	MGI_C57BL6J_1339755	Csf3r	NCBI_Gene:12986,ENSEMBL:ENSMUSG00000028859	MGI:1339755	protein coding gene	colony stimulating factor 3 receptor (granulocyte)
4	gene	126.0469	126.0555	positive	MGI_C57BL6J_1913657	Mrps15	NCBI_Gene:66407,ENSEMBL:ENSMUSG00000028861	MGI:1913657	protein coding gene	mitochondrial ribosomal protein S15
4	gene	126.0560	126.0922	positive	MGI_C57BL6J_1916308	Oscp1	NCBI_Gene:230751,ENSEMBL:ENSMUSG00000042616	MGI:1916308	protein coding gene	organic solute carrier partner 1
4	pseudogene	126.0698	126.0703	negative	MGI_C57BL6J_3650282	Rpl28-ps3	NCBI_Gene:100039645,ENSEMBL:ENSMUSG00000079942	MGI:3650282	pseudogene	ribosomal protein L28, pseudogene 3
4	gene	126.0966	126.0986	positive	MGI_C57BL6J_2151045	Lsm10	NCBI_Gene:116748,ENSEMBL:ENSMUSG00000050188	MGI:2151045	protein coding gene	U7 snRNP-specific Sm-like protein LSM10
4	gene	126.1005	126.1047	negative	MGI_C57BL6J_1924911	1520401O13Rik	NA	NA	unclassified gene	RIKEN cDNA 1520401O13 gene
4	gene	126.1039	126.1410	positive	MGI_C57BL6J_1921428	Stk40	NCBI_Gene:74178,ENSEMBL:ENSMUSG00000042608	MGI:1921428	protein coding gene	serine/threonine kinase 40
4	gene	126.1457	126.1499	positive	MGI_C57BL6J_1922063	Eva1b	NCBI_Gene:230752,ENSEMBL:ENSMUSG00000050212	MGI:1922063	protein coding gene	eva-1 homolog B (C. elegans)
4	gene	126.1460	126.1477	positive	MGI_C57BL6J_3650946	Gm12946	ENSEMBL:ENSMUSG00000086961	MGI:3650946	lncRNA gene	predicted gene 12946
4	gene	126.1506	126.1640	negative	MGI_C57BL6J_1914188	Sh3d21	NCBI_Gene:66938,ENSEMBL:ENSMUSG00000073758	MGI:1914188	protein coding gene	SH3 domain containing 21
4	gene	126.1641	126.2028	negative	MGI_C57BL6J_2442637	Thrap3	NCBI_Gene:230753,ENSEMBL:ENSMUSG00000043962	MGI:2442637	protein coding gene	thyroid hormone receptor associated protein 3
4	gene	126.2012	126.2013	negative	MGI_C57BL6J_5455100	Gm25323	ENSEMBL:ENSMUSG00000084504	MGI:5455100	snRNA gene	predicted gene, 25323
4	gene	126.2029	126.2039	positive	MGI_C57BL6J_1925109	D730050C22Rik	NA	NA	unclassified gene	RIKEN cDNA D730050C22 gene
4	gene	126.2322	126.2565	negative	MGI_C57BL6J_2384297	Map7d1	NCBI_Gene:245877,ENSEMBL:ENSMUSG00000028849	MGI:2384297	protein coding gene	MAP7 domain containing 1
4	gene	126.2623	126.2759	positive	MGI_C57BL6J_1351486	Trappc3	NCBI_Gene:27096,ENSEMBL:ENSMUSG00000028847	MGI:1351486	protein coding gene	trafficking protein particle complex 3
4	gene	126.2868	126.3143	positive	MGI_C57BL6J_88464	Col8a2	NCBI_Gene:329941,ENSEMBL:ENSMUSG00000056174	MGI:88464	protein coding gene	collagen, type VIII, alpha 2
4	gene	126.3160	126.3217	negative	MGI_C57BL6J_2140364	Adprhl2	NCBI_Gene:100206,ENSEMBL:ENSMUSG00000042558	MGI:2140364	protein coding gene	ADP-ribosylhydrolase like 2
4	gene	126.3221	126.3258	negative	MGI_C57BL6J_1346335	Tekt2	NCBI_Gene:24084,ENSEMBL:ENSMUSG00000028845	MGI:1346335	protein coding gene	tektin 2
4	gene	126.3236	126.3252	positive	MGI_C57BL6J_3704237	Gm12945	ENSEMBL:ENSMUSG00000087394	MGI:3704237	lncRNA gene	predicted gene 12945
4	gene	126.3270	126.4297	negative	MGI_C57BL6J_2446634	Ago3	NCBI_Gene:214150,ENSEMBL:ENSMUSG00000028842	MGI:2446634	protein coding gene	argonaute RISC catalytic subunit 3
4	gene	126.4350	126.4687	negative	MGI_C57BL6J_2446630	Ago1	NCBI_Gene:236511,ENSEMBL:ENSMUSG00000041530	MGI:2446630	protein coding gene	argonaute RISC catalytic subunit 1
4	pseudogene	126.4763	126.4767	negative	MGI_C57BL6J_3652021	Gm12929	ENSEMBL:ENSMUSG00000084099	MGI:3652021	pseudogene	predicted gene 12929
4	pseudogene	126.4767	126.4773	negative	MGI_C57BL6J_3652022	Gm12928	ENSEMBL:ENSMUSG00000082381	MGI:3652022	pseudogene	predicted gene 12928
4	gene	126.4895	126.5336	negative	MGI_C57BL6J_1924100	Ago4	NCBI_Gene:76850,ENSEMBL:ENSMUSG00000042500	MGI:1924100	protein coding gene	argonaute RISC catalytic subunit 4
4	pseudogene	126.5217	126.5221	positive	MGI_C57BL6J_3651149	Gm12935	ENSEMBL:ENSMUSG00000083461	MGI:3651149	pseudogene	predicted gene 12935
4	pseudogene	126.5243	126.5247	negative	MGI_C57BL6J_3651150	Gm12934	ENSEMBL:ENSMUSG00000082888	MGI:3651150	pseudogene	predicted gene 12934
4	gene	126.5569	126.5945	positive	MGI_C57BL6J_2445153	Clspn	NCBI_Gene:269582,ENSEMBL:ENSMUSG00000042489	MGI:2445153	protein coding gene	claspin
4	gene	126.5599	126.5599	positive	MGI_C57BL6J_5530942	Mir7119	miRBase:MI0022970,NCBI_Gene:102465673,ENSEMBL:ENSMUSG00000098831	MGI:5530942	miRNA gene	microRNA 7119
4	pseudogene	126.5844	126.5851	negative	MGI_C57BL6J_3651145	Gm12936	NCBI_Gene:102635893,ENSEMBL:ENSMUSG00000081319	MGI:3651145	pseudogene	predicted gene 12936
4	gene	126.6098	126.6144	positive	MGI_C57BL6J_3609248	5730409E04Rik	NCBI_Gene:230757,ENSEMBL:ENSMUSG00000073755	MGI:3609248	protein coding gene	RIKEN cDNA 5730409E04Rik gene
4	gene	126.6144	126.6148	negative	MGI_C57BL6J_5623135	Gm40250	NCBI_Gene:105244688	MGI:5623135	lncRNA gene	predicted gene, 40250
4	gene	126.6164	126.6203	negative	MGI_C57BL6J_5826507	Gm46870	NCBI_Gene:108168978	MGI:5826507	lncRNA gene	predicted gene, 46870
4	pseudogene	126.6652	126.6662	positive	MGI_C57BL6J_3651147	Gm12933	NCBI_Gene:620877,ENSEMBL:ENSMUSG00000081210	MGI:3651147	pseudogene	predicted gene 12933
4	gene	126.6776	126.7097	positive	MGI_C57BL6J_1347045	Psmb2	NCBI_Gene:26445,ENSEMBL:ENSMUSG00000028837	MGI:1347045	protein coding gene	proteasome (prosome, macropain) subunit, beta type 2
4	gene	126.6995	126.7040	positive	MGI_C57BL6J_2442195	E330021A06Rik	NA	NA	unclassified gene	RIKEN cDNA E330021A06 gene
4	gene	126.7160	126.7363	negative	MGI_C57BL6J_2679630	Tfap2e	NCBI_Gene:332937,ENSEMBL:ENSMUSG00000042477	MGI:2679630	protein coding gene	transcription factor AP-2, epsilon
4	gene	126.7438	126.7536	negative	MGI_C57BL6J_1347351	Ncdn	NCBI_Gene:26562,ENSEMBL:ENSMUSG00000028833	MGI:1347351	protein coding gene	neurochondrin
4	gene	126.7535	126.8701	positive	MGI_C57BL6J_2140475	AU040320	NCBI_Gene:100317,ENSEMBL:ENSMUSG00000028830	MGI:2140475	protein coding gene	expressed sequence AU040320
4	pseudogene	126.7955	126.7964	negative	MGI_C57BL6J_3650044	Gm12937	ENSEMBL:ENSMUSG00000082498	MGI:3650044	pseudogene	predicted gene 12937
4	gene	126.8180	126.8181	negative	MGI_C57BL6J_5453938	Gm24161	ENSEMBL:ENSMUSG00000077780	MGI:5453938	snoRNA gene	predicted gene, 24161
4	gene	126.8610	126.8611	negative	MGI_C57BL6J_5455381	Gm25604	ENSEMBL:ENSMUSG00000088984	MGI:5455381	snoRNA gene	predicted gene, 25604
4	gene	126.8618	126.9688	negative	MGI_C57BL6J_1915035	Zmym4	NCBI_Gene:67785,ENSEMBL:ENSMUSG00000042446	MGI:1915035	protein coding gene	zinc finger, MYM-type 4
4	gene	126.9681	126.9694	positive	MGI_C57BL6J_1918435	4933424C08Rik	NA	NA	unclassified gene	RIKEN cDNA 4933424C08 gene
4	pseudogene	126.9834	126.9836	positive	MGI_C57BL6J_3652092	Gm12939	ENSEMBL:ENSMUSG00000081609	MGI:3652092	pseudogene	predicted gene 12939
4	gene	127.0206	127.0511	positive	MGI_C57BL6J_1918764	Sfpq	NCBI_Gene:71514,ENSEMBL:ENSMUSG00000028820	MGI:1918764	protein coding gene	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
4	gene	127.0337	127.0494	positive	MGI_C57BL6J_3702626	Gm12940	ENSEMBL:ENSMUSG00000085334	MGI:3702626	lncRNA gene	predicted gene 12940
4	pseudogene	127.0464	127.0466	positive	MGI_C57BL6J_3650501	Gm12941	ENSEMBL:ENSMUSG00000084088	MGI:3650501	pseudogene	predicted gene 12941
4	gene	127.0471	127.0612	negative	MGI_C57BL6J_1915560	Zmym1	NCBI_Gene:68310,ENSEMBL:ENSMUSG00000043872	MGI:1915560	protein coding gene	zinc finger, MYM domain containing 1
4	pseudogene	127.0559	127.0567	positive	MGI_C57BL6J_3650498	Gm12944	NCBI_Gene:102635997,ENSEMBL:ENSMUSG00000084149	MGI:3650498	pseudogene	predicted gene 12944
4	gene	127.0774	127.1244	positive	MGI_C57BL6J_106505	Zmym6	NCBI_Gene:100177,ENSEMBL:ENSMUSG00000042408	MGI:106505	protein coding gene	zinc finger, MYM-type 6
4	gene	127.1085	127.1086	negative	MGI_C57BL6J_5455377	Gm25600	ENSEMBL:ENSMUSG00000088982	MGI:5455377	snRNA gene	predicted gene, 25600
4	gene	127.1237	127.1297	positive	MGI_C57BL6J_3758095	Tmem35b	NCBI_Gene:100039968,ENSEMBL:ENSMUSG00000070737	MGI:3758095	protein coding gene	transmembrane protein 35B
4	pseudogene	127.1412	127.1415	negative	MGI_C57BL6J_3650497	Gm12943	NCBI_Gene:621588,ENSEMBL:ENSMUSG00000082220	MGI:3650497	pseudogene	predicted gene 12943
4	gene	127.1685	127.2370	positive	MGI_C57BL6J_3039563	Dlgap3	NCBI_Gene:242667,ENSEMBL:ENSMUSG00000042388	MGI:3039563	protein coding gene	DLG associated protein 3
4	gene	127.2438	127.2478	positive	MGI_C57BL6J_1933141	Smim12	NCBI_Gene:80284,ENSEMBL:ENSMUSG00000042380	MGI:1933141	protein coding gene	small integral membrane protein 12
4	gene	127.2487	127.3134	positive	MGI_C57BL6J_5592428	Gm33269	NCBI_Gene:102636104	MGI:5592428	lncRNA gene	predicted gene, 33269
4	gene	127.2847	127.2848	negative	MGI_C57BL6J_5451998	Gm22221	ENSEMBL:ENSMUSG00000087987	MGI:5451998	snRNA gene	predicted gene, 22221
4	pseudogene	127.2968	127.2975	negative	MGI_C57BL6J_3649530	Gm12948	NCBI_Gene:100417246,ENSEMBL:ENSMUSG00000082047	MGI:3649530	pseudogene	predicted gene 12948
4	gene	127.3114	127.3140	negative	MGI_C57BL6J_95715	Gja4	NCBI_Gene:14612,ENSEMBL:ENSMUSG00000050234	MGI:95715	protein coding gene	gap junction protein, alpha 4
4	gene	127.3252	127.3308	negative	MGI_C57BL6J_95721	Gjb3	NCBI_Gene:14620,ENSEMBL:ENSMUSG00000042367	MGI:95721	protein coding gene	gap junction protein, beta 3
4	gene	127.3292	127.3433	positive	MGI_C57BL6J_5623136	Gm40251	NCBI_Gene:105244689	MGI:5623136	lncRNA gene	predicted gene, 40251
4	gene	127.3410	127.3541	negative	MGI_C57BL6J_95722	Gjb4	NCBI_Gene:14621,ENSEMBL:ENSMUSG00000046623	MGI:95722	protein coding gene	gap junction protein, beta 4
4	gene	127.3548	127.3582	negative	MGI_C57BL6J_95723	Gjb5	NCBI_Gene:14622,ENSEMBL:ENSMUSG00000042357	MGI:95723	protein coding gene	gap junction protein, beta 5
4	pseudogene	127.4083	127.4097	negative	MGI_C57BL6J_3649527	Gm12947	NCBI_Gene:667296,ENSEMBL:ENSMUSG00000079998	MGI:3649527	pseudogene	predicted gene 12947
4	gene	127.4171	127.4248	positive	MGI_C57BL6J_5623137	Gm40252	NCBI_Gene:105244690	MGI:5623137	lncRNA gene	predicted gene, 40252
4	gene	127.4290	127.4299	positive	MGI_C57BL6J_5623138	Gm40253	NA	NA	lncRNA gene	predicted gene%2c 40253
4	gene	127.4748	127.5329	positive	MGI_C57BL6J_1920738	1700080G11Rik	NCBI_Gene:73488,ENSEMBL:ENSMUSG00000086771	MGI:1920738	lncRNA gene	RIKEN cDNA 1700080G11 gene
4	gene	127.4748	127.4768	positive	MGI_C57BL6J_1925335	4930471C06Rik	ENSEMBL:ENSMUSG00000086138	MGI:1925335	lncRNA gene	RIKEN cDNA 4930471C06 gene
4	gene	127.5451	127.5705	positive	MGI_C57BL6J_2444470	A630031M04Rik	ENSEMBL:ENSMUSG00000087470	MGI:2444470	lncRNA gene	RIKEN cDNA A630031M04 gene
4	gene	127.6187	127.6199	positive	MGI_C57BL6J_5623140	Gm40255	NCBI_Gene:105244693	MGI:5623140	lncRNA gene	predicted gene, 40255
4	gene	127.8106	127.8122	negative	MGI_C57BL6J_1920846	1700112K13Rik	ENSEMBL:ENSMUSG00000087510	MGI:1920846	lncRNA gene	RIKEN cDNA 1700112K13 gene
4	gene	127.9139	127.9164	positive	MGI_C57BL6J_5623141	Gm40256	NCBI_Gene:105244694	MGI:5623141	lncRNA gene	predicted gene, 40256
4	gene	127.9276	127.9881	negative	MGI_C57BL6J_3616080	CK137956	NCBI_Gene:635169,ENSEMBL:ENSMUSG00000028813	MGI:3616080	protein coding gene	cDNA sequence CK137956
4	gene	127.9716	127.9724	positive	MGI_C57BL6J_5621456	Gm38571	NCBI_Gene:102641725	MGI:5621456	lncRNA gene	predicted gene, 38571
4	gene	127.9878	128.5677	positive	MGI_C57BL6J_2386401	Csmd2	NCBI_Gene:329942,ENSEMBL:ENSMUSG00000028804	MGI:2386401	protein coding gene	CUB and Sushi multiple domains 2
4	gene	128.1322	128.1670	negative	MGI_C57BL6J_1922239	Csmd2os	NCBI_Gene:74989,ENSEMBL:ENSMUSG00000087459	MGI:1922239	antisense lncRNA gene	CUB and Sushi multiple domains 2, opposite strand
4	gene	128.2602	128.2610	negative	MGI_C57BL6J_1916567	Hmgb4	NCBI_Gene:69317,ENSEMBL:ENSMUSG00000048686	MGI:1916567	protein coding gene	high-mobility group box 4
4	gene	128.2610	128.2630	positive	MGI_C57BL6J_1922492	Hmgb4os	NCBI_Gene:75242,ENSEMBL:ENSMUSG00000085717	MGI:1922492	antisense lncRNA gene	high-mobility group box 4, opposite strand
4	gene	128.5062	128.5334	negative	MGI_C57BL6J_5592815	Gm33656	NCBI_Gene:102636648	MGI:5592815	lncRNA gene	predicted gene, 33656
4	gene	128.5787	128.6102	negative	MGI_C57BL6J_2679268	Zscan20	NCBI_Gene:269585,ENSEMBL:ENSMUSG00000061894	MGI:2679268	protein coding gene	zinc finger and SCAN domains 20
4	gene	128.6154	128.6186	negative	MGI_C57BL6J_3045221	Tlr12	NCBI_Gene:384059,ENSEMBL:ENSMUSG00000062545	MGI:3045221	protein coding gene	toll-like receptor 12
4	gene	128.6372	128.6392	positive	MGI_C57BL6J_3652007	Gm12958	NCBI_Gene:105244695,ENSEMBL:ENSMUSG00000084891	MGI:3652007	lncRNA gene	predicted gene 12958
4	gene	128.6547	128.7529	positive	MGI_C57BL6J_1860454	Phc2	NCBI_Gene:54383,ENSEMBL:ENSMUSG00000028796	MGI:1860454	protein coding gene	polyhomeotic 2
4	gene	128.7213	128.7275	negative	MGI_C57BL6J_5592871	Gm33712	NA	NA	unclassified non-coding RNA gene	predicted gene%2c 33712
4	gene	128.7554	128.7702	positive	MGI_C57BL6J_2685279	A3galt2	NCBI_Gene:215493,ENSEMBL:ENSMUSG00000028794	MGI:2685279	protein coding gene	alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase)
4	gene	128.7731	128.8061	negative	MGI_C57BL6J_2652839	Zfp362	NCBI_Gene:230761,ENSEMBL:ENSMUSG00000028799	MGI:2652839	protein coding gene	zinc finger protein 362
4	gene	128.8462	128.8737	positive	MGI_C57BL6J_3649345	Gm12968	ENSEMBL:ENSMUSG00000085701	MGI:3649345	lncRNA gene	predicted gene 12968
4	pseudogene	128.8680	128.8694	negative	MGI_C57BL6J_3650134	Gm12969	NCBI_Gene:667354,ENSEMBL:ENSMUSG00000084011	MGI:3650134	pseudogene	predicted gene 12969
4	gene	128.8720	128.8774	negative	MGI_C57BL6J_5592973	Gm33814	NCBI_Gene:102636861	MGI:5592973	lncRNA gene	predicted gene, 33814
4	gene	128.8776	128.8823	positive	MGI_C57BL6J_5592919	Gm33760	NA	NA	unclassified non-coding RNA gene	predicted gene%2c 33760
4	gene	128.8817	128.9113	positive	MGI_C57BL6J_1914775	Trim62	NCBI_Gene:67525,ENSEMBL:ENSMUSG00000041000	MGI:1914775	protein coding gene	tripartite motif-containing 62
4	gene	128.9173	128.9223	positive	MGI_C57BL6J_5593060	Gm33901	NCBI_Gene:102636978	MGI:5593060	lncRNA gene	predicted gene, 33901
4	gene	128.9302	128.9625	negative	MGI_C57BL6J_2442093	Azin2	NCBI_Gene:242669,ENSEMBL:ENSMUSG00000028789	MGI:2442093	protein coding gene	antizyme inhibitor 2
4	gene	128.9360	128.9402	positive	MGI_C57BL6J_3801803	Gm15904	NCBI_Gene:105244696,ENSEMBL:ENSMUSG00000085961	MGI:3801803	lncRNA gene	predicted gene 15904
4	gene	128.9920	129.0115	positive	MGI_C57BL6J_87978	Ak2	NCBI_Gene:11637,ENSEMBL:ENSMUSG00000028792	MGI:87978	protein coding gene	adenylate kinase 2
4	gene	129.0501	129.0581	negative	MGI_C57BL6J_1914599	1700086P04Rik	NCBI_Gene:67349,ENSEMBL:ENSMUSG00000085085	MGI:1914599	lncRNA gene	RIKEN cDNA 1700086P04 gene
4	gene	129.0581	129.0859	positive	MGI_C57BL6J_1922484	Rnf19b	NCBI_Gene:75234,ENSEMBL:ENSMUSG00000028793	MGI:1922484	protein coding gene	ring finger protein 19B
4	gene	129.1055	129.1116	positive	MGI_C57BL6J_1913510	Tmem54	NCBI_Gene:66260,ENSEMBL:ENSMUSG00000028786	MGI:1913510	protein coding gene	transmembrane protein 54
4	gene	129.1116	129.1221	negative	MGI_C57BL6J_1336200	Hpca	NCBI_Gene:15444,ENSEMBL:ENSMUSG00000028785	MGI:1336200	protein coding gene	hippocalcin
4	gene	129.1351	129.1369	positive	MGI_C57BL6J_3801906	Gm15906	ENSEMBL:ENSMUSG00000087416	MGI:3801906	lncRNA gene	predicted gene 15906
4	gene	129.1369	129.1446	positive	MGI_C57BL6J_1917614	Fndc5	NCBI_Gene:384061,ENSEMBL:ENSMUSG00000001334	MGI:1917614	protein coding gene	fibronectin type III domain containing 5
4	gene	129.1480	129.1897	negative	MGI_C57BL6J_1921898	S100pbp	NCBI_Gene:74648,ENSEMBL:ENSMUSG00000040928	MGI:1921898	protein coding gene	S100P binding protein
4	gene	129.1898	129.2196	positive	MGI_C57BL6J_2147627	Yars	NCBI_Gene:107271,ENSEMBL:ENSMUSG00000028811	MGI:2147627	protein coding gene	tyrosyl-tRNA synthetase
4	gene	129.2196	129.2614	negative	MGI_C57BL6J_2140651	C77080	NCBI_Gene:97130,ENSEMBL:ENSMUSG00000050390	MGI:2140651	protein coding gene	expressed sequence C77080
4	gene	129.2394	129.2868	positive	MGI_C57BL6J_3650499	Gm12976	NCBI_Gene:102637131,ENSEMBL:ENSMUSG00000087575	MGI:3650499	lncRNA gene	predicted gene 12976
4	gene	129.2829	129.2829	negative	MGI_C57BL6J_5452771	Gm22994	ENSEMBL:ENSMUSG00000093163	MGI:5452771	miRNA gene	predicted gene, 22994
4	gene	129.2875	129.3094	positive	MGI_C57BL6J_1916078	Sync	NCBI_Gene:68828,ENSEMBL:ENSMUSG00000001333	MGI:1916078	protein coding gene	syncoilin
4	gene	129.3071	129.3354	negative	MGI_C57BL6J_1194912	Rbbp4	NCBI_Gene:19646,ENSEMBL:ENSMUSG00000057236	MGI:1194912	protein coding gene	retinoblastoma binding protein 4, chromatin remodeling factor
4	gene	129.3091	129.3184	positive	MGI_C57BL6J_5477216	Gm26722	ENSEMBL:ENSMUSG00000096944	MGI:5477216	lncRNA gene	predicted gene, 26722
4	gene	129.3356	129.3545	positive	MGI_C57BL6J_1914356	Zbtb8os	NCBI_Gene:67106,ENSEMBL:ENSMUSG00000057572	MGI:1914356	protein coding gene	zinc finger and BTB domain containing 8 opposite strand
4	gene	129.3536	129.3781	negative	MGI_C57BL6J_1920930	Zbtb8a	NCBI_Gene:73680,ENSEMBL:ENSMUSG00000028807	MGI:1920930	protein coding gene	zinc finger and BTB domain containing 8a
4	pseudogene	129.3798	129.3802	positive	MGI_C57BL6J_3651320	Gm12980	ENSEMBL:ENSMUSG00000082468	MGI:3651320	pseudogene	predicted gene 12980
4	gene	129.3825	129.4075	positive	MGI_C57BL6J_2444986	C330020E22Rik	NCBI_Gene:320896	MGI:2444986	lncRNA gene	RIKEN cDNA C330020E22 gene
4	gene	129.4258	129.4468	negative	MGI_C57BL6J_2387181	Zbtb8b	NCBI_Gene:215627,ENSEMBL:ENSMUSG00000048485	MGI:2387181	protein coding gene	zinc finger and BTB domain containing 8b
4	gene	129.4584	129.4585	positive	MGI_C57BL6J_5454398	Gm24621	ENSEMBL:ENSMUSG00000064613	MGI:5454398	snRNA gene	predicted gene, 24621
4	gene	129.4602	129.4615	negative	MGI_C57BL6J_1918074	4921504P20Rik	NA	NA	unclassified gene	RIKEN cDNA 4921504P20 gene
4	gene	129.4616	129.4885	positive	MGI_C57BL6J_1913466	Bsdc1	NCBI_Gene:100383,ENSEMBL:ENSMUSG00000040859	MGI:1913466	protein coding gene	BSD domain containing 1
4	gene	129.4890	129.4910	negative	MGI_C57BL6J_1929914	Tssk3	NCBI_Gene:58864,ENSEMBL:ENSMUSG00000000411	MGI:1929914	protein coding gene	testis-specific serine kinase 3
4	gene	129.4912	129.4920	positive	MGI_C57BL6J_1915483	Fam229a	NCBI_Gene:68233,ENSEMBL:ENSMUSG00000078554	MGI:1915483	protein coding gene	family with sequence similarity 229, member A
4	gene	129.4920	129.5097	negative	MGI_C57BL6J_3651303	Gm12979	ENSEMBL:ENSMUSG00000086336	MGI:3651303	lncRNA gene	predicted gene 12979
4	gene	129.5136	129.5160	positive	MGI_C57BL6J_97143	Marcksl1	NCBI_Gene:17357,ENSEMBL:ENSMUSG00000047945	MGI:97143	protein coding gene	MARCKS-like 1
4	gene	129.5161	129.5427	negative	MGI_C57BL6J_108086	Hdac1	NCBI_Gene:433759,ENSEMBL:ENSMUSG00000028800	MGI:108086	protein coding gene	histone deacetylase 1
4	gene	129.5483	129.5736	negative	MGI_C57BL6J_96756	Lck	NCBI_Gene:16818,ENSEMBL:ENSMUSG00000000409	MGI:96756	protein coding gene	lymphocyte protein tyrosine kinase
4	gene	129.5577	129.5578	negative	MGI_C57BL6J_5530949	Mir8119	miRBase:MI0026051,NCBI_Gene:102465997,ENSEMBL:ENSMUSG00000099070	MGI:5530949	miRNA gene	microRNA 8119
4	gene	129.5768	129.5786	negative	MGI_C57BL6J_2668032	Fam167b	NCBI_Gene:230766,ENSEMBL:ENSMUSG00000050493	MGI:2668032	protein coding gene	family with sequence similarity 167, member B
4	gene	129.5920	129.6006	negative	MGI_C57BL6J_1860763	Eif3i	NCBI_Gene:54709,ENSEMBL:ENSMUSG00000028798	MGI:1860763	protein coding gene	eukaryotic translation initiation factor 3, subunit I
4	gene	129.6007	129.6241	positive	MGI_C57BL6J_1924049	Tmem234	NCBI_Gene:76799,ENSEMBL:ENSMUSG00000028797	MGI:1924049	protein coding gene	transmembrane protein 234
4	gene	129.6083	129.6145	negative	MGI_C57BL6J_2686212	Dcdc2b	NCBI_Gene:100504491,ENSEMBL:ENSMUSG00000078552	MGI:2686212	protein coding gene	doublecortin domain containing 2b
4	gene	129.6151	129.6191	negative	MGI_C57BL6J_2446212	Iqcc	NCBI_Gene:230767,ENSEMBL:ENSMUSG00000040795	MGI:2446212	protein coding gene	IQ motif containing C
4	gene	129.6193	129.6239	negative	MGI_C57BL6J_1913514	Ccdc28b	NCBI_Gene:66264,ENSEMBL:ENSMUSG00000028795	MGI:1913514	protein coding gene	coiled coil domain containing 28B
4	gene	129.6231	129.6241	positive	MGI_C57BL6J_5593464	Gm34305	NCBI_Gene:102637517	MGI:5593464	lncRNA gene	predicted gene, 34305
4	gene	129.6243	129.6251	negative	MGI_C57BL6J_1920034	2810452K05Rik	NA	NA	unclassified gene	RIKEN cDNA 2810452K05 gene
4	gene	129.6261	129.6411	negative	MGI_C57BL6J_105968	Txlna	NCBI_Gene:109658,ENSEMBL:ENSMUSG00000053841	MGI:105968	protein coding gene	taxilin alpha
4	gene	129.6440	129.6728	negative	MGI_C57BL6J_1100836	Kpna6	NCBI_Gene:16650,ENSEMBL:ENSMUSG00000003731	MGI:1100836	protein coding gene	karyopherin (importin) alpha 6
4	gene	129.6764	129.6968	negative	MGI_C57BL6J_2682939	Tmem39b	NCBI_Gene:230770,ENSEMBL:ENSMUSG00000053730	MGI:2682939	protein coding gene	transmembrane protein 39b
4	gene	129.6845	129.6846	negative	MGI_C57BL6J_5531376	Mir7016	miRBase:MI0022865,NCBI_Gene:102465615,ENSEMBL:ENSMUSG00000098422	MGI:5531376	miRNA gene	microRNA 7016
4	gene	129.7024	129.7428	negative	MGI_C57BL6J_893579	Khdrbs1	NCBI_Gene:20218,ENSEMBL:ENSMUSG00000028790	MGI:893579	protein coding gene	KH domain containing, RNA binding, signal transduction associated 1
4	pseudogene	129.7616	129.7619	negative	MGI_C57BL6J_3652042	Gm12967	NCBI_Gene:100040532,ENSEMBL:ENSMUSG00000080944	MGI:3652042	pseudogene	predicted gene 12967
4	gene	129.7623	129.7624	negative	MGI_C57BL6J_5531399	Gm28017	ENSEMBL:ENSMUSG00000099322	MGI:5531399	miRNA gene	predicted gene, 28017
4	gene	129.8112	129.8500	positive	MGI_C57BL6J_1277117	Ptp4a2	NCBI_Gene:19244,ENSEMBL:ENSMUSG00000028788	MGI:1277117	protein coding gene	protein tyrosine phosphatase 4a2
4	gene	129.8207	129.8221	positive	MGI_C57BL6J_1923343	5830469G19Rik	NA	NA	unclassified gene	RIKEN cDNA 5830469G19 gene
4	gene	129.8525	129.8537	negative	MGI_C57BL6J_1921548	1700108I11Rik	NCBI_Gene:105244698	MGI:1921548	lncRNA gene	RIKEN cDNA 1700108I11 gene
4	pseudogene	129.8551	129.8567	positive	MGI_C57BL6J_3708701	Gm10571	ENSEMBL:ENSMUSG00000073753	MGI:3708701	pseudogene	predicted gene 10571
4	gene	129.8956	129.8957	positive	MGI_C57BL6J_5453622	Gm23845	ENSEMBL:ENSMUSG00000065768	MGI:5453622	snRNA gene	predicted gene, 23845
4	pseudogene	129.8989	129.9004	positive	MGI_C57BL6J_3652043	Gm12966	NCBI_Gene:622469,ENSEMBL:ENSMUSG00000070729	MGI:3652043	pseudogene	predicted gene 12966
4	gene	129.9062	129.9198	positive	MGI_C57BL6J_2442924	E330017L17Rik	NCBI_Gene:319894,ENSEMBL:ENSMUSG00000086369	MGI:2442924	lncRNA gene	RIKEN cDNA E330017L17 gene
4	gene	129.9288	129.9571	positive	MGI_C57BL6J_3652045	Spocd1	NCBI_Gene:622480,ENSEMBL:ENSMUSG00000028784	MGI:3652045	protein coding gene	SPOC domain containing 1
4	gene	129.9604	129.9651	positive	MGI_C57BL6J_1919475	1700003M07Rik	NCBI_Gene:72225,ENSEMBL:ENSMUSG00000085389	MGI:1919475	lncRNA gene	RIKEN cDNA 1700003M07 gene
4	gene	129.9849	130.0226	positive	MGI_C57BL6J_2451244	Adgrb2	NCBI_Gene:230775,ENSEMBL:ENSMUSG00000028782	MGI:2451244	protein coding gene	adhesion G protein-coupled receptor B2
4	gene	130.0230	130.0497	negative	MGI_C57BL6J_3651569	Gm12963	NCBI_Gene:102640839,ENSEMBL:ENSMUSG00000085517	MGI:3651569	lncRNA gene	predicted gene 12963
4	gene	130.0474	130.0993	positive	MGI_C57BL6J_1095396	Col16a1	NCBI_Gene:107581,ENSEMBL:ENSMUSG00000040690	MGI:1095396	protein coding gene	collagen, type XVI, alpha 1
4	gene	130.0762	130.0795	negative	MGI_C57BL6J_5826508	Gm46871	NCBI_Gene:108168980	MGI:5826508	lncRNA gene	predicted gene, 46871
4	gene	130.1026	130.1281	positive	MGI_C57BL6J_1915148	Pef1	NCBI_Gene:67898,ENSEMBL:ENSMUSG00000028779	MGI:1915148	protein coding gene	penta-EF hand domain containing 1
4	gene	130.1055	130.1083	negative	MGI_C57BL6J_5623143	Gm40258	NCBI_Gene:105244699	MGI:5623143	lncRNA gene	predicted gene, 40258
4	gene	130.1302	130.1397	negative	MGI_C57BL6J_2385650	Hcrtr1	NCBI_Gene:230777,ENSEMBL:ENSMUSG00000028778	MGI:2385650	protein coding gene	hypocretin (orexin) receptor 1
4	gene	130.1440	130.1489	positive	MGI_C57BL6J_5623144	Gm40259	NCBI_Gene:105244700	MGI:5623144	lncRNA gene	predicted gene, 40259
4	gene	130.1645	130.1751	negative	MGI_C57BL6J_2137617	Tinagl1	NCBI_Gene:94242,ENSEMBL:ENSMUSG00000028776	MGI:2137617	protein coding gene	tubulointerstitial nephritis antigen-like 1
4	gene	130.2090	130.2224	negative	MGI_C57BL6J_2685699	Ldc1	NCBI_Gene:332942,ENSEMBL:ENSMUSG00000023120	MGI:2685699	protein coding gene	leucine decarboxylase 1
4	gene	130.2366	130.2491	positive	MGI_C57BL6J_5826361	Gm46724	NCBI_Gene:108168712	MGI:5826361	lncRNA gene	predicted gene, 46724
4	gene	130.2535	130.2792	negative	MGI_C57BL6J_1919132	Serinc2	NCBI_Gene:230779,ENSEMBL:ENSMUSG00000023232	MGI:1919132	protein coding gene	serine incorporator 2
4	gene	130.2757	130.2809	positive	MGI_C57BL6J_5594116	Gm34957	NCBI_Gene:102638376	MGI:5594116	lncRNA gene	predicted gene, 34957
4	gene	130.2912	130.3087	negative	MGI_C57BL6J_3642427	Gm10570	NCBI_Gene:102638454,ENSEMBL:ENSMUSG00000073752	MGI:3642427	lncRNA gene	predicted gene 10570
4	gene	130.3086	130.3155	positive	MGI_C57BL6J_95476	Fabp3	NCBI_Gene:14077,ENSEMBL:ENSMUSG00000028773	MGI:95476	protein coding gene	fatty acid binding protein 3, muscle and heart
4	gene	130.3154	130.3600	negative	MGI_C57BL6J_1919955	Zcchc17	NCBI_Gene:619605,ENSEMBL:ENSMUSG00000028772	MGI:1919955	protein coding gene	zinc finger, CCHC domain containing 17
4	gene	130.3177	130.3333	positive	MGI_C57BL6J_5594233	Gm35074	NCBI_Gene:102638533	MGI:5594233	lncRNA gene	predicted gene, 35074
4	gene	130.3601	130.3900	positive	MGI_C57BL6J_1913835	Snrnp40	NCBI_Gene:66585,ENSEMBL:ENSMUSG00000074088	MGI:1913835	protein coding gene	small nuclear ribonucleoprotein 40 (U5)
4	gene	130.3710	130.3720	negative	MGI_C57BL6J_1922417	4930527F18Rik	NA	NA	unclassified gene	RIKEN cDNA 4930527F18 gene
4	gene	130.3799	130.3808	positive	MGI_C57BL6J_1920110	2900017G11Rik	NA	NA	unclassified gene	RIKEN cDNA 2900017G11 gene
4	gene	130.5301	130.5742	negative	MGI_C57BL6J_1914399	Nkain1	NCBI_Gene:67149,ENSEMBL:ENSMUSG00000078532	MGI:1914399	protein coding gene	Na+/K+ transporting ATPase interacting 1
4	gene	130.5723	130.5731	negative	MGI_C57BL6J_1916206	1500006G06Rik	NA	NA	unclassified gene	RIKEN cDNA 1500006G06 gene
4	gene	130.6633	130.7816	positive	MGI_C57BL6J_1931749	Pum1	NCBI_Gene:80912,ENSEMBL:ENSMUSG00000028580	MGI:1931749	protein coding gene	pumilio RNA-binding family member 1
4	gene	130.7097	130.7105	positive	MGI_C57BL6J_1919888	2810017D21Rik	NA	NA	unclassified gene	RIKEN cDNA 2810017D21 gene
4	gene	130.7496	130.7497	positive	MGI_C57BL6J_3819558	Snord85	NCBI_Gene:100217460,ENSEMBL:ENSMUSG00000065196	MGI:3819558	snoRNA gene	small nucleolar RNA, C/D box 85
4	gene	130.7586	130.7624	positive	MGI_C57BL6J_3650041	Gm12971	ENSEMBL:ENSMUSG00000087449	MGI:3650041	lncRNA gene	predicted gene 12971
4	gene	130.7663	130.7664	positive	MGI_C57BL6J_5453868	Gm24091	ENSEMBL:ENSMUSG00000093793	MGI:5453868	snoRNA gene	predicted gene, 24091
4	gene	130.7748	130.7792	negative	MGI_C57BL6J_5477010	Gm26516	ENSEMBL:ENSMUSG00000097158	MGI:5477010	lncRNA gene	predicted gene, 26516
4	gene	130.7757	130.7758	positive	MGI_C57BL6J_5453488	Gm23711	ENSEMBL:ENSMUSG00000095119	MGI:5453488	snoRNA gene	predicted gene, 23711
4	gene	130.7845	130.7880	positive	MGI_C57BL6J_3650043	Gm12972	NCBI_Gene:108168710,ENSEMBL:ENSMUSG00000086548	MGI:3650043	lncRNA gene	predicted gene 12972
4	gene	130.7925	130.8263	positive	MGI_C57BL6J_1349163	Sdc3	NCBI_Gene:20970,ENSEMBL:ENSMUSG00000025743	MGI:1349163	protein coding gene	syndecan 3
4	gene	130.8116	130.8123	negative	MGI_C57BL6J_3650040	Gm12970	ENSEMBL:ENSMUSG00000087451	MGI:3650040	lncRNA gene	predicted gene 12970
4	gene	130.8244	130.8263	negative	MGI_C57BL6J_5477210	Gm26716	ENSEMBL:ENSMUSG00000097224	MGI:5477210	lncRNA gene	predicted gene, 26716
4	gene	130.8278	130.8342	negative	MGI_C57BL6J_5625201	Gm42316	NCBI_Gene:105247171	MGI:5625201	lncRNA gene	predicted gene, 42316
4	gene	130.8578	130.8579	negative	MGI_C57BL6J_5452437	Gm22660	ENSEMBL:ENSMUSG00000077381	MGI:5452437	snoRNA gene	predicted gene, 22660
4	gene	130.8710	130.8729	positive	MGI_C57BL6J_5594453	Gm35294	NCBI_Gene:102638819	MGI:5594453	lncRNA gene	predicted gene, 35294
4	gene	130.9061	130.9146	negative	MGI_C57BL6J_5621484	Gm38599	NCBI_Gene:102642196	MGI:5621484	lncRNA gene	predicted gene, 38599
4	gene	130.9129	130.9361	positive	MGI_C57BL6J_108046	Laptm5	NCBI_Gene:16792,ENSEMBL:ENSMUSG00000028581	MGI:108046	protein coding gene	lysosomal-associated protein transmembrane 5
4	gene	130.9444	130.9555	positive	MGI_C57BL6J_106591	Matn1	NCBI_Gene:17180,ENSEMBL:ENSMUSG00000040533	MGI:106591	protein coding gene	matrilin 1, cartilage matrix protein
4	gene	130.9747	131.0013	positive	MGI_C57BL6J_3650042	Gm12973	NCBI_Gene:108168713,ENSEMBL:ENSMUSG00000085804	MGI:3650042	lncRNA gene	predicted gene 12973
4	gene	131.0008	131.0105	negative	MGI_C57BL6J_1925085	A930031H19Rik	NCBI_Gene:77835,ENSEMBL:ENSMUSG00000086262	MGI:1925085	lncRNA gene	RIKEN cDNA A930031H19 gene
4	gene	131.0639	131.0656	negative	MGI_C57BL6J_5625202	Gm42317	NCBI_Gene:105247172	MGI:5625202	lncRNA gene	predicted gene, 42317
4	gene	131.0757	131.0803	negative	MGI_C57BL6J_5594641	Gm35482	NCBI_Gene:102639082	MGI:5594641	lncRNA gene	predicted gene, 35482
4	gene	131.1563	131.1627	positive	MGI_C57BL6J_5625203	Gm42318	NCBI_Gene:105247173	MGI:5625203	lncRNA gene	predicted gene, 42318
4	gene	131.2393	131.2394	positive	MGI_C57BL6J_5455038	Gm25261	ENSEMBL:ENSMUSG00000088041	MGI:5455038	snoRNA gene	predicted gene, 25261
4	gene	131.4091	131.4283	positive	MGI_C57BL6J_5594793	Gm35634	NCBI_Gene:102639287	MGI:5594793	lncRNA gene	predicted gene, 35634
4	gene	131.4563	131.4826	positive	MGI_C57BL6J_5826360	Gm46723	NCBI_Gene:108168711	MGI:5826360	lncRNA gene	predicted gene, 46723
4	gene	131.4584	131.4855	negative	MGI_C57BL6J_5594938	Gm35779	NCBI_Gene:102639475	MGI:5594938	lncRNA gene	predicted gene, 35779
4	gene	131.4872	131.5055	positive	MGI_C57BL6J_2685677	Gm831	NCBI_Gene:329950,ENSEMBL:ENSMUSG00000078531	MGI:2685677	lncRNA gene	predicted gene 831
4	gene	131.6174	131.6351	positive	MGI_C57BL6J_5625205	Gm42320	NCBI_Gene:105247175	MGI:5625205	lncRNA gene	predicted gene, 42320
4	gene	131.6470	131.6778	negative	MGI_C57BL6J_3650901	Gm12962	ENSEMBL:ENSMUSG00000087171	MGI:3650901	lncRNA gene	predicted gene 12962
4	gene	131.6471	131.7105	negative	MGI_C57BL6J_5625206	Gm42321	NCBI_Gene:105247176	MGI:5625206	lncRNA gene	predicted gene, 42321
4	gene	131.6946	131.7105	negative	MGI_C57BL6J_3802056	Gm16080	ENSEMBL:ENSMUSG00000086856	MGI:3802056	lncRNA gene	predicted gene 16080
4	gene	131.7685	131.8383	negative	MGI_C57BL6J_1321151	Ptpru	NCBI_Gene:19273,ENSEMBL:ENSMUSG00000028909	MGI:1321151	protein coding gene	protein tyrosine phosphatase, receptor type, U
4	gene	131.8434	131.8678	positive	MGI_C57BL6J_1349441	Mecr	NCBI_Gene:26922,ENSEMBL:ENSMUSG00000028910	MGI:1349441	protein coding gene	mitochondrial trans-2-enoyl-CoA reductase
4	gene	131.8736	131.9017	positive	MGI_C57BL6J_1890577	Srsf4	NCBI_Gene:57317,ENSEMBL:ENSMUSG00000028911	MGI:1890577	protein coding gene	serine/arginine-rich splicing factor 4
4	gene	131.8786	131.8832	positive	MGI_C57BL6J_2442442	A930004J17Rik	ENSEMBL:ENSMUSG00000102602	MGI:2442442	unclassified gene	RIKEN cDNA A930004J17 gene
4	gene	131.8879	131.8894	positive	MGI_C57BL6J_1918083	4733401A01Rik	NA	NA	unclassified gene	RIKEN cDNA 4733401A01 gene
4	gene	131.8995	131.9200	negative	MGI_C57BL6J_3702644	Gm12992	NCBI_Gene:545681,ENSEMBL:ENSMUSG00000085667	MGI:3702644	lncRNA gene	predicted gene 12992
4	pseudogene	131.9027	131.9033	negative	MGI_C57BL6J_3705382	Gm12978	NCBI_Gene:100418326,ENSEMBL:ENSMUSG00000083013	MGI:3705382	pseudogene	predicted gene 12978
4	gene	131.9200	131.9240	positive	MGI_C57BL6J_3646343	Tmem200b	NCBI_Gene:623230,ENSEMBL:ENSMUSG00000070720	MGI:3646343	protein coding gene	transmembrane protein 200B
4	gene	131.9208	131.9215	negative	MGI_C57BL6J_6324745	Gm50475	ENSEMBL:ENSMUSG00000118394	MGI:6324745	lncRNA gene	predicted gene, 50475
4	gene	131.9234	132.0756	negative	MGI_C57BL6J_95401	Epb41	NCBI_Gene:269587,ENSEMBL:ENSMUSG00000028906	MGI:95401	protein coding gene	erythrocyte membrane protein band 4.1
4	gene	131.9922	131.9923	negative	MGI_C57BL6J_5530827	Gm27445	ENSEMBL:ENSMUSG00000098577	MGI:5530827	miRNA gene	predicted gene, 27445
4	gene	132.0482	132.0490	positive	MGI_C57BL6J_3649474	Gm13063	ENSEMBL:ENSMUSG00000084869	MGI:3649474	lncRNA gene	predicted gene 13063
4	gene	132.0495	132.0498	positive	MGI_C57BL6J_5595316	Gm36157	NCBI_Gene:102639968	MGI:5595316	lncRNA gene	predicted gene, 36157
4	gene	132.0747	132.0770	positive	MGI_C57BL6J_3641670	Gm10300	ENSEMBL:ENSMUSG00000070717	MGI:3641670	protein coding gene	predicted gene 10300
4	pseudogene	132.0939	132.0943	positive	MGI_C57BL6J_3650812	Gm13214	ENSEMBL:ENSMUSG00000083368	MGI:3650812	pseudogene	predicted gene 13214
4	gene	132.1048	132.1094	negative	MGI_C57BL6J_5610939	Gm37711	ENSEMBL:ENSMUSG00000102796	MGI:5610939	unclassified gene	predicted gene, 37711
4	gene	132.1077	132.1445	negative	MGI_C57BL6J_97438	Oprd1	NCBI_Gene:18386,ENSEMBL:ENSMUSG00000050511	MGI:97438	protein coding gene	opioid receptor, delta 1
4	gene	132.1253	132.1253	positive	MGI_C57BL6J_4413695	n-TAcgc3	NCBI_Gene:102467236	MGI:4413695	tRNA gene	nuclear encoded tRNA alanine 3 (anticodon CGC)
4	pseudogene	132.1484	132.1489	negative	MGI_C57BL6J_3650813	Gm13215	NCBI_Gene:664894,ENSEMBL:ENSMUSG00000081394	MGI:3650813	pseudogene	predicted gene 13215
4	gene	132.1849	132.2123	negative	MGI_C57BL6J_2444233	Ythdf2	NCBI_Gene:213541,ENSEMBL:ENSMUSG00000040025	MGI:2444233	protein coding gene	YTH N6-methyladenosine RNA binding protein 2
4	gene	132.2184	132.2185	negative	MGI_C57BL6J_5451810	Gm22033	ENSEMBL:ENSMUSG00000080597	MGI:5451810	miRNA gene	predicted gene, 22033
4	pseudogene	132.2199	132.2206	negative	MGI_C57BL6J_3652187	Rps15a-ps4	NCBI_Gene:664903,ENSEMBL:ENSMUSG00000083757	MGI:3652187	pseudogene	ribosomal protein S15A, pseudogene 4
4	gene	132.2210	132.2616	negative	MGI_C57BL6J_2135604	Gmeb1	NCBI_Gene:56809,ENSEMBL:ENSMUSG00000028901	MGI:2135604	protein coding gene	glucocorticoid modulatory element binding protein 1
4	pseudogene	132.2447	132.2460	negative	MGI_C57BL6J_3651953	Gm13252	NCBI_Gene:105247177,ENSEMBL:ENSMUSG00000084105	MGI:3651953	pseudogene	predicted gene 13252
4	gene	132.2605	132.2688	positive	MGI_C57BL6J_5579580	Gm28874	NCBI_Gene:102640216,ENSEMBL:ENSMUSG00000100813	MGI:5579580	lncRNA gene	predicted gene 28874
4	gene	132.2701	132.2702	positive	MGI_C57BL6J_5579578	Gm28872	ENSEMBL:ENSMUSG00000099937	MGI:5579578	lncRNA gene	predicted gene 28872
4	gene	132.2701	132.2702	negative	MGI_C57BL6J_2148804	Rnu11	NCBI_Gene:353373,ENSEMBL:ENSMUSG00000077323	MGI:2148804	snRNA gene	U11 small nuclear RNA
4	gene	132.2741	132.2743	negative	MGI_C57BL6J_3629726	Gt(pU21)115Imeg	NA	NA	unclassified gene	gene trap 115%2c Institute of Molecular Embryology and Genetics
4	gene	132.2744	132.2958	positive	MGI_C57BL6J_1913714	Taf12	NCBI_Gene:66464,ENSEMBL:ENSMUSG00000028899	MGI:1913714	protein coding gene	TATA-box binding protein associated factor 12
4	gene	132.3004	132.3034	negative	MGI_C57BL6J_2441753	Rab42	NCBI_Gene:242681,ENSEMBL:ENSMUSG00000089687	MGI:2441753	protein coding gene	RAB42, member RAS oncogene family
4	gene	132.3086	132.3110	positive	MGI_C57BL6J_1916721	Snhg12	NCBI_Gene:100039864,ENSEMBL:ENSMUSG00000086290	MGI:1916721	lncRNA gene	small nucleolar RNA host gene 12
4	gene	132.3095	132.3096	positive	MGI_C57BL6J_4361141	Snora16a	NCBI_Gene:100310813,ENSEMBL:ENSMUSG00000065097,ENSEMBL:ENSMUSG00000105911	MGI:4361141	snoRNA gene	small nucleolar RNA, H/ACA box 16A
4	gene	132.3099	132.3101	positive	MGI_C57BL6J_3819506	Snora44	NCBI_Gene:100217418,ENSEMBL:ENSMUSG00000064604	MGI:3819506	snoRNA gene	small nucleolar RNA, H/ACA box 44
4	gene	132.3102	132.3104	positive	MGI_C57BL6J_3819510	Snora61	NCBI_Gene:100217440,ENSEMBL:ENSMUSG00000064949	MGI:3819510	snoRNA gene	small nucleolar RNA, H/ACA box 61
4	gene	132.3107	132.3108	positive	MGI_C57BL6J_3819570	Snord99	NCBI_Gene:100217437,ENSEMBL:ENSMUSG00000080615	MGI:3819570	snoRNA gene	small nucleolar RNA, C/D box 99
4	gene	132.3118	132.3295	negative	MGI_C57BL6J_1919037	Trnau1ap	NCBI_Gene:71787,ENSEMBL:ENSMUSG00000028898	MGI:1919037	protein coding gene	tRNA selenocysteine 1 associated protein 1
4	gene	132.3319	132.3536	negative	MGI_C57BL6J_1913989	Rcc1	NCBI_Gene:100088,ENSEMBL:ENSMUSG00000028896	MGI:1913989	protein coding gene	regulator of chromosome condensation 1
4	gene	132.3480	132.3537	negative	MGI_C57BL6J_2684817	Snhg3	NCBI_Gene:399101,ENSEMBL:ENSMUSG00000085241	MGI:2684817	lncRNA gene	small nucleolar RNA host gene 3
4	gene	132.3518	132.3534	positive	MGI_C57BL6J_4936934	Gm17300	ENSEMBL:ENSMUSG00000091021	MGI:4936934	lncRNA gene	predicted gene, 17300
4	gene	132.3523	132.3525	negative	MGI_C57BL6J_4360049	Snora73b	NCBI_Gene:100306945,ENSEMBL:ENSMUSG00000065353	MGI:4360049	snoRNA gene	small nucleolar RNA, H/ACA box 73b
4	gene	132.3528	132.3530	negative	MGI_C57BL6J_4360046	Snora73a	NCBI_Gene:100306944,ENSEMBL:ENSMUSG00000064387	MGI:4360046	snoRNA gene	small nucleolar RNA, H/ACA box 73a
4	gene	132.3559	132.4225	negative	MGI_C57BL6J_2140327	Phactr4	NCBI_Gene:100169,ENSEMBL:ENSMUSG00000066043	MGI:2140327	protein coding gene	phosphatase and actin regulator 4
4	gene	132.4083	132.4084	positive	MGI_C57BL6J_5455484	Gm25707	ENSEMBL:ENSMUSG00000096350	MGI:5455484	miRNA gene	predicted gene, 25707
4	gene	132.4420	132.4421	positive	MGI_C57BL6J_5452832	Gm23055	ENSEMBL:ENSMUSG00000064739	MGI:5452832	snRNA gene	predicted gene, 23055
4	gene	132.4587	132.4639	negative	MGI_C57BL6J_1914469	Med18	NCBI_Gene:67219,ENSEMBL:ENSMUSG00000066042	MGI:1914469	protein coding gene	mediator complex subunit 18
4	gene	132.4920	132.5105	negative	MGI_C57BL6J_2651874	Sesn2	NCBI_Gene:230784,ENSEMBL:ENSMUSG00000028893	MGI:2651874	protein coding gene	sestrin 2
4	gene	132.5036	132.5096	negative	MGI_C57BL6J_3651528	Gm12981	ENSEMBL:ENSMUSG00000086997	MGI:3651528	lncRNA gene	predicted gene 12981
4	gene	132.5160	132.5161	positive	MGI_C57BL6J_4413681	n-TAagc8	NCBI_Gene:102467230	MGI:4413681	tRNA gene	nuclear encoded tRNA alanine 8 (anticodon AGC)
4	gene	132.5306	132.5354	negative	MGI_C57BL6J_1196457	Atpif1	NCBI_Gene:11983,ENSEMBL:ENSMUSG00000054428	MGI:1196457	protein coding gene	ATPase inhibitory factor 1
4	gene	132.5327	132.5336	positive	MGI_C57BL6J_3651167	Gm12999	ENSEMBL:ENSMUSG00000087352	MGI:3651167	lncRNA gene	predicted gene 12999
4	gene	132.5356	132.5537	positive	MGI_C57BL6J_1915848	Dnajc8	NCBI_Gene:68598,ENSEMBL:ENSMUSG00000054405	MGI:1915848	protein coding gene	DnaJ heat shock protein family (Hsp40) member C8
4	gene	132.5471	132.5472	negative	MGI_C57BL6J_5454539	Gm24762	ENSEMBL:ENSMUSG00000065623	MGI:5454539	snRNA gene	predicted gene, 24762
4	gene	132.5641	132.5827	positive	MGI_C57BL6J_106066	Ptafr	NCBI_Gene:19204,ENSEMBL:ENSMUSG00000056529	MGI:106066	protein coding gene	platelet-activating factor receptor
4	gene	132.6390	132.7248	positive	MGI_C57BL6J_109339	Eya3	NCBI_Gene:14050,ENSEMBL:ENSMUSG00000028886	MGI:109339	protein coding gene	EYA transcriptional coactivator and phosphatase 3
4	gene	132.6391	132.6403	positive	MGI_C57BL6J_1923270	5830409B07Rik	NA	NA	unclassified gene	RIKEN cDNA 5830409B07 gene
4	gene	132.7249	132.7326	negative	MGI_C57BL6J_2685877	Xkr8	NCBI_Gene:381560,ENSEMBL:ENSMUSG00000037752	MGI:2685877	protein coding gene	X-linked Kx blood group related 8
4	gene	132.7330	132.7573	negative	MGI_C57BL6J_1916022	Smpdl3b	NCBI_Gene:100340,ENSEMBL:ENSMUSG00000028885	MGI:1916022	protein coding gene	sphingomyelin phosphodiesterase, acid-like 3B
4	gene	132.7683	132.7788	positive	MGI_C57BL6J_1339939	Rpa2	NCBI_Gene:19891,ENSEMBL:ENSMUSG00000028884	MGI:1339939	protein coding gene	replication protein A2
4	gene	132.7818	132.7964	negative	MGI_C57BL6J_2446213	Themis2	NCBI_Gene:230787,ENSEMBL:ENSMUSG00000037731	MGI:2446213	protein coding gene	thymocyte selection associated family member 2
4	pseudogene	132.8020	132.8023	negative	MGI_C57BL6J_3651775	Gm13022	ENSEMBL:ENSMUSG00000081647	MGI:3651775	pseudogene	predicted gene 13022
4	gene	132.8269	132.8432	negative	MGI_C57BL6J_2140494	Ppp1r8	NCBI_Gene:100336,ENSEMBL:ENSMUSG00000028882	MGI:2140494	protein coding gene	protein phosphatase 1, regulatory subunit 8
4	gene	132.8384	132.8385	negative	MGI_C57BL6J_5452544	Gm22767	ENSEMBL:ENSMUSG00000088990	MGI:5452544	snoRNA gene	predicted gene, 22767
4	gene	132.8535	132.8845	negative	MGI_C57BL6J_1931027	Stx12	NCBI_Gene:100226,ENSEMBL:ENSMUSG00000028879	MGI:1931027	protein coding gene	syntaxin 12
4	gene	132.8822	132.8833	negative	MGI_C57BL6J_1924875	C530007A02Rik	NA	NA	unclassified gene	RIKEN cDNA C530007A02 gene
4	pseudogene	132.8848	132.8866	positive	MGI_C57BL6J_3649305	Gm13033	NCBI_Gene:100038703,ENSEMBL:ENSMUSG00000083816	MGI:3649305	pseudogene	predicted gene 13033
4	gene	132.8992	132.9231	negative	MGI_C57BL6J_2385211	Fam76a	NCBI_Gene:230789,ENSEMBL:ENSMUSG00000028878	MGI:2385211	protein coding gene	family with sequence similarity 76, member A
4	gene	132.9312	132.9313	negative	MGI_C57BL6J_5454690	Gm24913	ENSEMBL:ENSMUSG00000087911	MGI:5454690	snRNA gene	predicted gene, 24913
4	gene	132.9484	132.9607	negative	MGI_C57BL6J_5595677	Gm36518	NCBI_Gene:102640462	MGI:5595677	lncRNA gene	predicted gene, 36518
4	gene	132.9741	133.0019	positive	MGI_C57BL6J_95527	Fgr	NCBI_Gene:14191,ENSEMBL:ENSMUSG00000028874	MGI:95527	protein coding gene	FGR proto-oncogene, Src family tyrosine kinase
4	gene	133.0027	133.0082	negative	MGI_C57BL6J_5595758	Gm36599	NCBI_Gene:102640565	MGI:5595758	lncRNA gene	predicted gene, 36599
4	gene	133.0113	133.0781	positive	MGI_C57BL6J_2444218	Ahdc1	NCBI_Gene:230793,ENSEMBL:ENSMUSG00000037692	MGI:2444218	protein coding gene	AT hook, DNA binding motif, containing 1
4	gene	133.0834	133.0891	positive	MGI_C57BL6J_5477109	Gm26615	NCBI_Gene:102640635,ENSEMBL:ENSMUSG00000097088	MGI:5477109	lncRNA gene	predicted gene, 26615
4	gene	133.1145	133.1146	negative	MGI_C57BL6J_4413870	n-TGgcc1	NCBI_Gene:102467429	MGI:4413870	tRNA gene	nuclear encoded tRNA glycine 1 (anticodon GCC)
4	gene	133.1305	133.1998	positive	MGI_C57BL6J_1098641	Wasf2	NCBI_Gene:242687,ENSEMBL:ENSMUSG00000028868	MGI:1098641	protein coding gene	WAS protein family, member 2
4	gene	133.1714	133.1717	negative	MGI_C57BL6J_5454413	Gm24636	ENSEMBL:ENSMUSG00000089298	MGI:5454413	unclassified non-coding RNA gene	predicted gene, 24636
4	gene	133.1957	133.1957	positive	MGI_C57BL6J_5531327	Mir7017	miRBase:MI0022866,NCBI_Gene:102466215,ENSEMBL:ENSMUSG00000099202	MGI:5531327	miRNA gene	microRNA 7017
4	gene	133.2093	133.2125	negative	MGI_C57BL6J_101908	Gpr3	NCBI_Gene:14748,ENSEMBL:ENSMUSG00000049649	MGI:101908	protein coding gene	G-protein coupled receptor 3
4	gene	133.2121	133.2246	positive	MGI_C57BL6J_1916905	Cd164l2	NCBI_Gene:69655,ENSEMBL:ENSMUSG00000028865	MGI:1916905	protein coding gene	CD164 sialomucin-like 2
4	pseudogene	133.2315	133.2393	positive	MGI_C57BL6J_3510254	Fcnc-ps	NCBI_Gene:493918	MGI:3510254	pseudogene	ficolin C pseudogene
4	gene	133.2397	133.2529	positive	MGI_C57BL6J_1855691	Map3k6	NCBI_Gene:53608,ENSEMBL:ENSMUSG00000028862	MGI:1855691	protein coding gene	mitogen-activated protein kinase kinase kinase 6
4	gene	133.2531	133.2631	negative	MGI_C57BL6J_1933365	Sytl1	NCBI_Gene:269589,ENSEMBL:ENSMUSG00000028860	MGI:1933365	protein coding gene	synaptotagmin-like 1
4	gene	133.2660	133.2778	negative	MGI_C57BL6J_1098568	Tmem222	NCBI_Gene:52174,ENSEMBL:ENSMUSG00000028857	MGI:1098568	protein coding gene	transmembrane protein 222
4	pseudogene	133.2809	133.2813	negative	MGI_C57BL6J_3700962	Gm13259	ENSEMBL:ENSMUSG00000083241	MGI:3700962	pseudogene	predicted gene 13259
4	gene	133.2925	133.3535	negative	MGI_C57BL6J_2685541	Wdtc1	NCBI_Gene:230796,ENSEMBL:ENSMUSG00000037622	MGI:2685541	protein coding gene	WD and tetratricopeptide repeats 1
4	gene	133.2925	133.2928	positive	MGI_C57BL6J_3781803	Gm3627	NA	NA	protein coding gene	predicted gene 3627
4	gene	133.3697	133.4237	positive	MGI_C57BL6J_102462	Slc9a1	NCBI_Gene:20544,ENSEMBL:ENSMUSG00000028854	MGI:102462	protein coding gene	solute carrier family 9 (sodium/hydrogen exchanger), member 1
4	gene	133.3698	133.3699	positive	MGI_C57BL6J_4950447	Mir5122	miRBase:MI0018031,NCBI_Gene:100628620,ENSEMBL:ENSMUSG00000092745	MGI:4950447	miRNA gene	microRNA 5122
4	gene	133.4327	133.4349	negative	MGI_C57BL6J_1920802	1700091J24Rik	NCBI_Gene:105247178	MGI:1920802	lncRNA gene	RIKEN cDNA 1700091J24 gene
4	gene	133.4371	133.4404	negative	MGI_C57BL6J_5625207	Gm42322	NCBI_Gene:105247179	MGI:5625207	lncRNA gene	predicted gene, 42322
4	gene	133.4794	133.4852	negative	MGI_C57BL6J_3651057	Gm13257	NCBI_Gene:102640829,ENSEMBL:ENSMUSG00000086850	MGI:3651057	lncRNA gene	predicted gene 13257
4	gene	133.4801	133.4879	positive	MGI_C57BL6J_2140500	Tent5b	NCBI_Gene:100342,ENSEMBL:ENSMUSG00000046694	MGI:2140500	protein coding gene	terminal nucleotidyltransferase 5B
4	gene	133.4911	133.4992	negative	MGI_C57BL6J_1916789	Trnp1	NCBI_Gene:69539,ENSEMBL:ENSMUSG00000056596	MGI:1916789	protein coding gene	TMF1-regulated nuclear protein 1
4	gene	133.5129	133.5223	negative	MGI_C57BL6J_5625208	Gm42323	NCBI_Gene:105247180	MGI:5625208	protein coding gene	predicted gene, 42323
4	gene	133.5189	133.5308	positive	MGI_C57BL6J_1916323	Kdf1	NCBI_Gene:69073,ENSEMBL:ENSMUSG00000037600	MGI:1916323	protein coding gene	keratinocyte differentiation factor 1
4	gene	133.5325	133.5460	negative	MGI_C57BL6J_106014	Nudc	NCBI_Gene:18221,ENSEMBL:ENSMUSG00000028851	MGI:106014	protein coding gene	nudC nuclear distribution protein
4	gene	133.5534	133.5567	positive	MGI_C57BL6J_1346344	Nr0b2	NCBI_Gene:23957,ENSEMBL:ENSMUSG00000037583	MGI:1346344	protein coding gene	nuclear receptor subfamily 0, group B, member 2
4	gene	133.5588	133.5589	negative	MGI_C57BL6J_5452935	Gm23158	ENSEMBL:ENSMUSG00000093886	MGI:5452935	miRNA gene	predicted gene, 23158
4	gene	133.5747	133.5842	positive	MGI_C57BL6J_2442492	Gpatch3	NCBI_Gene:242691,ENSEMBL:ENSMUSG00000028850	MGI:2442492	protein coding gene	G patch domain containing 3
4	gene	133.5844	133.5917	positive	MGI_C57BL6J_2140368	Gpn2	NCBI_Gene:100210,ENSEMBL:ENSMUSG00000028848	MGI:2140368	protein coding gene	GPN-loop GTPase 2
4	gene	133.5949	133.5960	negative	MGI_C57BL6J_5625209	Gm42324	NCBI_Gene:105247181	MGI:5625209	lncRNA gene	predicted gene, 42324
4	gene	133.6006	133.6022	negative	MGI_C57BL6J_1891831	Sfn	NCBI_Gene:55948,ENSEMBL:ENSMUSG00000047281	MGI:1891831	protein coding gene	stratifin
4	gene	133.6047	133.6502	negative	MGI_C57BL6J_3527792	Zdhhc18	NCBI_Gene:503610,ENSEMBL:ENSMUSG00000037553	MGI:3527792	protein coding gene	zinc finger, DHHC domain containing 18
4	pseudogene	133.6381	133.6506	negative	MGI_C57BL6J_3651606	Gm13213	NCBI_Gene:545683,ENSEMBL:ENSMUSG00000083885	MGI:3651606	pseudogene	predicted gene 13213
4	gene	133.6540	133.6543	positive	MGI_C57BL6J_5452439	Gm22662	ENSEMBL:ENSMUSG00000093031	MGI:5452439	unclassified non-coding RNA gene	predicted gene, 22662
4	gene	133.6599	133.6732	negative	MGI_C57BL6J_2442480	Pigv	NCBI_Gene:230801,ENSEMBL:ENSMUSG00000043257	MGI:2442480	protein coding gene	phosphatidylinositol glycan anchor biosynthesis, class V
4	gene	133.6727	133.6732	positive	MGI_C57BL6J_1920565	1700041L08Rik	NA	NA	unclassified gene	RIKEN cDNA 1700041L08 gene
4	gene	133.6790	133.7568	negative	MGI_C57BL6J_1935147	Arid1a	NCBI_Gene:93760,ENSEMBL:ENSMUSG00000007880	MGI:1935147	protein coding gene	AT rich interactive domain 1A (SWI-like)
4	gene	133.7171	133.7171	negative	MGI_C57BL6J_5562763	Mir7227	miRBase:MI0023722,NCBI_Gene:102465707,ENSEMBL:ENSMUSG00000104566	MGI:5562763	miRNA gene	microRNA 7227
4	gene	133.7681	133.7754	negative	MGI_C57BL6J_5589178	Gm30019	NCBI_Gene:102631762	MGI:5589178	lncRNA gene	predicted gene, 30019
4	gene	133.7750	133.7813	positive	MGI_C57BL6J_5589101	Gm29942	NCBI_Gene:102631659	MGI:5589101	lncRNA gene	predicted gene, 29942
4	gene	133.7920	133.8215	negative	MGI_C57BL6J_5593455	Gm34296	NCBI_Gene:102637505	MGI:5593455	lncRNA gene	predicted gene, 34296
4	gene	133.7976	133.7977	negative	MGI_C57BL6J_5455047	Gm25270	ENSEMBL:ENSMUSG00000084555	MGI:5455047	snRNA gene	predicted gene, 25270
4	gene	133.8152	133.8216	positive	MGI_C57BL6J_3650037	Gm12974	NCBI_Gene:105247182,ENSEMBL:ENSMUSG00000084789	MGI:3650037	lncRNA gene	predicted gene 12974
4	gene	133.8473	133.8878	negative	MGI_C57BL6J_104558	Rps6ka1	NCBI_Gene:20111,ENSEMBL:ENSMUSG00000003644	MGI:104558	protein coding gene	ribosomal protein S6 kinase polypeptide 1
4	gene	133.8716	133.8772	positive	MGI_C57BL6J_3650699	Gm12977	NCBI_Gene:102631939,ENSEMBL:ENSMUSG00000085009	MGI:3650699	lncRNA gene	predicted gene 12977
4	pseudogene	133.8829	133.8831	negative	MGI_C57BL6J_3651383	Gm12985	ENSEMBL:ENSMUSG00000080946	MGI:3651383	pseudogene	predicted gene 12985
4	gene	133.8834	133.8835	negative	MGI_C57BL6J_5452300	Gm22523	ENSEMBL:ENSMUSG00000089321	MGI:5452300	snRNA gene	predicted gene, 22523
4	gene	133.9110	133.9114	negative	MGI_C57BL6J_1921148	4930429E23Rik	NA	NA	unclassified gene	RIKEN cDNA 4930429E23 gene
4	gene	133.9647	133.9686	negative	MGI_C57BL6J_96136	Hmgn2	NCBI_Gene:15331,ENSEMBL:ENSMUSG00000003038	MGI:96136	protein coding gene	high mobility group nucleosomal binding domain 2
4	gene	133.9690	134.0009	negative	MGI_C57BL6J_1914672	Dhdds	NCBI_Gene:67422,ENSEMBL:ENSMUSG00000012117	MGI:1914672	protein coding gene	dehydrodolichyl diphosphate synthase
4	gene	134.0033	134.0192	negative	MGI_C57BL6J_1890546	Lin28a	NCBI_Gene:83557,ENSEMBL:ENSMUSG00000050966	MGI:1890546	protein coding gene	lin-28 homolog A (C. elegans)
4	gene	134.0034	134.0049	positive	MGI_C57BL6J_3710625	Gm10299	NA	NA	unclassified gene	predicted gene 10299
4	gene	134.0181	134.0199	positive	MGI_C57BL6J_3650259	Gm13061	ENSEMBL:ENSMUSG00000087288	MGI:3650259	lncRNA gene	predicted gene 13061
4	gene	134.0512	134.0590	positive	MGI_C57BL6J_3650254	Zfp683	NCBI_Gene:100503878,ENSEMBL:ENSMUSG00000049410	MGI:3650254	protein coding gene	zinc finger protein 683
4	gene	134.0607	134.0925	positive	MGI_C57BL6J_1334463	Crybg2	NCBI_Gene:230806,ENSEMBL:ENSMUSG00000012123	MGI:1334463	protein coding gene	crystallin beta-gamma domain containing 2
4	gene	134.0824	134.0951	negative	MGI_C57BL6J_1346088	Cd52	NCBI_Gene:23833,ENSEMBL:ENSMUSG00000000682	MGI:1346088	protein coding gene	CD52 antigen
4	gene	134.1025	134.1276	positive	MGI_C57BL6J_1914836	Ubxn11	NCBI_Gene:67586,ENSEMBL:ENSMUSG00000012126	MGI:1914836	protein coding gene	UBX domain protein 11
4	gene	134.1274	134.1288	negative	MGI_C57BL6J_1920973	Sh3bgrl3	NCBI_Gene:73723,ENSEMBL:ENSMUSG00000028843	MGI:1920973	protein coding gene	SH3 domain binding glutamic acid-rich protein-like 3
4	gene	134.1299	134.1871	negative	MGI_C57BL6J_1917262	Cep85	NCBI_Gene:70012,ENSEMBL:ENSMUSG00000037443	MGI:1917262	protein coding gene	centrosomal protein 85
4	gene	134.1600	134.1641	positive	MGI_C57BL6J_5826531	Gm46894	NCBI_Gene:108169013	MGI:5826531	protein coding gene	predicted gene, 46894
4	gene	134.1678	134.1679	negative	MGI_C57BL6J_5531001	Gm27619	ENSEMBL:ENSMUSG00000098693	MGI:5531001	snoRNA gene	predicted gene, 27619
4	gene	134.1908	134.2030	negative	MGI_C57BL6J_3702974	Gm7534	NCBI_Gene:665186,ENSEMBL:ENSMUSG00000073747	MGI:3702974	protein coding gene	predicted gene 7534
4	pseudogene	134.1998	134.2002	negative	MGI_C57BL6J_3651062	Gm13131	ENSEMBL:ENSMUSG00000081772	MGI:3651062	pseudogene	predicted gene 13131
4	gene	134.2120	134.2274	negative	MGI_C57BL6J_3043288	Catsper4	NCBI_Gene:329954,ENSEMBL:ENSMUSG00000048003	MGI:3043288	protein coding gene	cation channel, sperm associated 4
4	gene	134.2280	134.2384	negative	MGI_C57BL6J_2670958	Cnksr1	NCBI_Gene:194231,ENSEMBL:ENSMUSG00000028841	MGI:2670958	protein coding gene	connector enhancer of kinase suppressor of Ras 1
4	gene	134.2433	134.2456	negative	MGI_C57BL6J_1915290	Zfp593	NCBI_Gene:68040,ENSEMBL:ENSMUSG00000028840	MGI:1915290	protein coding gene	zinc finger protein 593
4	gene	134.2437	134.2459	positive	MGI_C57BL6J_3528958	E130218I03Rik	NCBI_Gene:77490,ENSEMBL:ENSMUSG00000086322	MGI:3528958	lncRNA gene	RIKEN cDNA E130218I03 gene
4	gene	134.2469	134.2500	positive	MGI_C57BL6J_5589350	Gm30191	ENSEMBL:ENSMUSG00000108398	MGI:5589350	protein coding gene	predicted gene, 30191
4	gene	134.2511	134.2662	negative	MGI_C57BL6J_1919940	Grrp1	NCBI_Gene:72690,ENSEMBL:ENSMUSG00000050105	MGI:1919940	protein coding gene	glycine/arginine rich protein 1
4	gene	134.2558	134.2657	positive	MGI_C57BL6J_5625210	Gm42325	NCBI_Gene:105247183	MGI:5625210	lncRNA gene	predicted gene, 42325
4	gene	134.2750	134.2879	negative	MGI_C57BL6J_2385213	Pdik1l	NCBI_Gene:230809,ENSEMBL:ENSMUSG00000050890	MGI:2385213	protein coding gene	PDLIM1 interacting kinase 1 like
4	gene	134.3151	134.3296	positive	MGI_C57BL6J_2447992	Trim63	NCBI_Gene:433766,ENSEMBL:ENSMUSG00000028834	MGI:2447992	protein coding gene	tripartite motif-containing 63
4	pseudogene	134.3355	134.3358	negative	MGI_C57BL6J_3652269	Gm13195	ENSEMBL:ENSMUSG00000083065	MGI:3652269	pseudogene	predicted gene 13195
4	gene	134.3430	134.3545	positive	MGI_C57BL6J_106637	Slc30a2	NCBI_Gene:230810,ENSEMBL:ENSMUSG00000028836	MGI:106637	protein coding gene	solute carrier family 30 (zinc transporter), member 2
4	gene	134.3564	134.3838	negative	MGI_C57BL6J_1888742	Extl1	NCBI_Gene:56219,ENSEMBL:ENSMUSG00000028838	MGI:1888742	protein coding gene	exostoses (multiple)-like 1
4	gene	134.3849	134.3870	positive	MGI_C57BL6J_3779501	Gm5589	NA	NA	unclassified gene	predicted gene 5589
4	gene	134.3963	134.4274	positive	MGI_C57BL6J_2140321	Pafah2	NCBI_Gene:100163,ENSEMBL:ENSMUSG00000037366	MGI:2140321	protein coding gene	platelet-activating factor acetylhydrolase 2
4	gene	134.4337	134.4483	negative	MGI_C57BL6J_5589612	Gm30453	NCBI_Gene:102632361	MGI:5589612	lncRNA gene	predicted gene, 30453
4	gene	134.4488	134.4502	negative	MGI_C57BL6J_1916659	1700021N21Rik	NCBI_Gene:69409,ENSEMBL:ENSMUSG00000087343	MGI:1916659	lncRNA gene	RIKEN cDNA 1700021N21 gene
4	gene	134.4683	134.4738	positive	MGI_C57BL6J_96739	Stmn1	NCBI_Gene:16765,ENSEMBL:ENSMUSG00000028832	MGI:96739	protein coding gene	stathmin 1
4	gene	134.4684	134.4685	positive	MGI_C57BL6J_5453411	Gm23634	ENSEMBL:ENSMUSG00000092812	MGI:5453411	miRNA gene	predicted gene, 23634
4	pseudogene	134.4932	134.4940	positive	MGI_C57BL6J_3650425	Gm13250	NCBI_Gene:100416260,ENSEMBL:ENSMUSG00000083001	MGI:3650425	pseudogene	predicted gene 13250
4	gene	134.4967	134.5102	positive	MGI_C57BL6J_1919154	Paqr7	NCBI_Gene:71904,ENSEMBL:ENSMUSG00000037348	MGI:1919154	protein coding gene	progestin and adipoQ receptor family member VII
4	gene	134.5110	134.5239	positive	MGI_C57BL6J_1917135	Aunip	NCBI_Gene:69885,ENSEMBL:ENSMUSG00000078521	MGI:1917135	protein coding gene	aurora kinase A and ninein interacting protein
4	gene	134.5256	134.5354	negative	MGI_C57BL6J_1924074	Mtfr1l	NCBI_Gene:76824,ENSEMBL:ENSMUSG00000046671	MGI:1924074	protein coding gene	mitochondrial fission regulator 1-like
4	gene	134.5379	134.5522	negative	MGI_C57BL6J_2151208	Selenon	NCBI_Gene:74777,ENSEMBL:ENSMUSG00000050989	MGI:2151208	protein coding gene	selenoprotein N
4	gene	134.5617	134.7043	negative	MGI_C57BL6J_2446214	Man1c1	NCBI_Gene:230815,ENSEMBL:ENSMUSG00000037306	MGI:2446214	protein coding gene	mannosidase, alpha, class 1C, member 1
4	gene	134.5677	134.5679	negative	MGI_C57BL6J_5531374	Mir6403	miRBase:MI0021939,NCBI_Gene:102465216,ENSEMBL:ENSMUSG00000099289	MGI:5531374	miRNA gene	microRNA 6403
4	gene	134.5914	134.5950	positive	MGI_C57BL6J_5625211	Gm42326	NCBI_Gene:105247184	MGI:5625211	lncRNA gene	predicted gene, 42326
4	gene	134.7416	134.7680	negative	MGI_C57BL6J_2140175	Ldlrap1	NCBI_Gene:100017,ENSEMBL:ENSMUSG00000037295	MGI:2140175	protein coding gene	low density lipoprotein receptor adaptor protein 1
4	gene	134.8028	134.8536	negative	MGI_C57BL6J_1913396	Maco1	NCBI_Gene:66146,ENSEMBL:ENSMUSG00000028826	MGI:1913396	protein coding gene	macoilin 1
4	gene	134.8645	134.8962	positive	MGI_C57BL6J_1202882	Rhd	NCBI_Gene:19746,ENSEMBL:ENSMUSG00000028825	MGI:1202882	protein coding gene	Rh blood group, D antigen
4	gene	134.8978	134.9150	negative	MGI_C57BL6J_1919067	Tmem50a	NCBI_Gene:71817,ENSEMBL:ENSMUSG00000028822	MGI:1919067	protein coding gene	transmembrane protein 50A
4	gene	134.9236	134.9277	positive	MGI_C57BL6J_106498	Rsrp1	NCBI_Gene:27981,ENSEMBL:ENSMUSG00000037266	MGI:106498	protein coding gene	arginine/serine rich protein 1
4	gene	134.9309	134.9375	positive	MGI_C57BL6J_1915842	Syf2	NCBI_Gene:68592,ENSEMBL:ENSMUSG00000028821	MGI:1915842	protein coding gene	SYF2 homolog, RNA splicing factor (S. cerevisiae)
4	gene	135.0437	135.0514	negative	MGI_C57BL6J_5625212	Gm42327	NCBI_Gene:105247185	MGI:5625212	lncRNA gene	predicted gene, 42327
4	gene	135.1182	135.1204	negative	MGI_C57BL6J_3801903	Gm16225	ENSEMBL:ENSMUSG00000086884	MGI:3801903	lncRNA gene	predicted gene 16225
4	gene	135.1206	135.1780	positive	MGI_C57BL6J_102672	Runx3	NCBI_Gene:12399,ENSEMBL:ENSMUSG00000070691	MGI:102672	protein coding gene	runt related transcription factor 3
4	gene	135.1434	135.1443	negative	MGI_C57BL6J_3801902	Gm16224	ENSEMBL:ENSMUSG00000084986	MGI:3801902	lncRNA gene	predicted gene 16224
4	gene	135.2140	135.2728	negative	MGI_C57BL6J_1352754	Clic4	NCBI_Gene:29876,ENSEMBL:ENSMUSG00000037242	MGI:1352754	protein coding gene	chloride intracellular channel 4 (mitochondrial)
4	gene	135.2831	135.2891	positive	MGI_C57BL6J_5589926	Gm30767	NCBI_Gene:102632783	MGI:5589926	lncRNA gene	predicted gene, 30767
4	pseudogene	135.2903	135.2907	negative	MGI_C57BL6J_3651378	Gm12983	NCBI_Gene:676072,ENSEMBL:ENSMUSG00000087270	MGI:3651378	pseudogene	predicted gene 12983
4	gene	135.2966	135.2994	negative	MGI_C57BL6J_5589860	Gm30701	NCBI_Gene:102632698	MGI:5589860	lncRNA gene	predicted gene, 30701
4	gene	135.3073	135.3095	positive	MGI_C57BL6J_3651384	Gm12984	ENSEMBL:ENSMUSG00000085002	MGI:3651384	lncRNA gene	predicted gene 12984
4	pseudogene	135.3078	135.3080	negative	MGI_C57BL6J_3651381	Gm12982	ENSEMBL:ENSMUSG00000082833	MGI:3651381	pseudogene	predicted gene 12982
4	gene	135.3205	135.3533	negative	MGI_C57BL6J_1858303	Srrm1	NCBI_Gene:51796,ENSEMBL:ENSMUSG00000028809	MGI:1858303	protein coding gene	serine/arginine repetitive matrix 1
4	gene	135.3696	135.3983	negative	MGI_C57BL6J_2444888	Ncmap	NCBI_Gene:230822,ENSEMBL:ENSMUSG00000043924	MGI:2444888	protein coding gene	noncompact myelin associated protein
4	pseudogene	135.3772	135.3772	positive	MGI_C57BL6J_3651750	Gm12991	ENSEMBL:ENSMUSG00000084032	MGI:3651750	pseudogene	predicted gene 12991
4	pseudogene	135.4032	135.4037	negative	MGI_C57BL6J_3651107	Gm12990	ENSEMBL:ENSMUSG00000081136	MGI:3651107	pseudogene	predicted gene 12990
4	gene	135.4123	135.4339	negative	MGI_C57BL6J_1858220	Rcan3	NCBI_Gene:53902,ENSEMBL:ENSMUSG00000059713	MGI:1858220	protein coding gene	regulator of calcineurin 3
4	gene	135.4166	135.4166	negative	MGI_C57BL6J_3629655	Mir700	miRBase:MI0004684,NCBI_Gene:735285,ENSEMBL:ENSMUSG00000076123	MGI:3629655	miRNA gene	microRNA 700
4	gene	135.4207	135.4278	positive	MGI_C57BL6J_5589981	Gm30822	NCBI_Gene:102632859	MGI:5589981	lncRNA gene	predicted gene, 30822
4	gene	135.4301	135.4308	negative	MGI_C57BL6J_3801882	Gm15979	ENSEMBL:ENSMUSG00000087016	MGI:3801882	lncRNA gene	predicted gene 15979
4	gene	135.4454	135.4950	negative	MGI_C57BL6J_1921802	Nipal3	NCBI_Gene:74552,ENSEMBL:ENSMUSG00000028803	MGI:1921802	protein coding gene	NIPA-like domain containing 3
4	gene	135.4509	135.4512	positive	MGI_C57BL6J_5610498	Gm37270	ENSEMBL:ENSMUSG00000103955	MGI:5610498	unclassified gene	predicted gene, 37270
4	gene	135.4948	135.5378	positive	MGI_C57BL6J_1926056	Stpg1	NCBI_Gene:78806,ENSEMBL:ENSMUSG00000028801	MGI:1926056	protein coding gene	sperm tail PG rich repeat containing 1
4	gene	135.5124	135.5125	negative	MGI_C57BL6J_5455094	Gm25317	ENSEMBL:ENSMUSG00000080474	MGI:5455094	miRNA gene	predicted gene, 25317
4	gene	135.5419	135.5736	negative	MGI_C57BL6J_2655333	Grhl3	NCBI_Gene:230824,ENSEMBL:ENSMUSG00000037188	MGI:2655333	protein coding gene	grainyhead like transcription factor 3
4	gene	135.5736	135.5802	positive	MGI_C57BL6J_5590047	Gm30888	NCBI_Gene:102632942	MGI:5590047	lncRNA gene	predicted gene, 30888
4	gene	135.5837	135.5838	positive	MGI_C57BL6J_5452883	Gm23106	ENSEMBL:ENSMUSG00000088179	MGI:5452883	snRNA gene	predicted gene, 23106
4	gene	135.6267	135.6302	positive	MGI_C57BL6J_1913597	1700029M20Rik	NCBI_Gene:73937,ENSEMBL:ENSMUSG00000086788	MGI:1913597	lncRNA gene	RIKEN cDNA 1700029M20 gene
4	gene	135.6503	135.6540	negative	MGI_C57BL6J_5590100	Gm30941	NCBI_Gene:102633011	MGI:5590100	lncRNA gene	predicted gene, 30941
4	gene	135.6863	135.7082	positive	MGI_C57BL6J_2429859	Ifnlr1	NCBI_Gene:242700,ENSEMBL:ENSMUSG00000062157	MGI:2429859	protein coding gene	interferon lambda receptor 1
4	pseudogene	135.7157	135.7167	negative	MGI_C57BL6J_3652245	Gm12989	NCBI_Gene:100418217,ENSEMBL:ENSMUSG00000083678	MGI:3652245	pseudogene	predicted gene 12989
4	gene	135.7282	135.7554	positive	MGI_C57BL6J_2663588	Il22ra1	NCBI_Gene:230828,ENSEMBL:ENSMUSG00000037157	MGI:2663588	protein coding gene	interleukin 22 receptor, alpha 1
4	pseudogene	135.7556	135.7568	negative	MGI_C57BL6J_3650876	Gm12988	NCBI_Gene:665334,ENSEMBL:ENSMUSG00000082743	MGI:3650876	pseudogene	predicted gene 12988
4	gene	135.7588	135.8156	positive	MGI_C57BL6J_2685280	Myom3	NCBI_Gene:242702,ENSEMBL:ENSMUSG00000037139	MGI:2685280	protein coding gene	myomesin family, member 3
4	pseudogene	135.8537	135.8542	positive	MGI_C57BL6J_3650940	Gm13000	ENSEMBL:ENSMUSG00000081672	MGI:3650940	pseudogene	predicted gene 13000
4	gene	135.8557	135.8699	positive	MGI_C57BL6J_1333805	Srsf10	NCBI_Gene:14105,ENSEMBL:ENSMUSG00000028676	MGI:1333805	protein coding gene	serine/arginine-rich splicing factor 10
4	gene	135.8709	135.8739	negative	MGI_C57BL6J_106512	Pnrc2	NCBI_Gene:52830,ENSEMBL:ENSMUSG00000028675	MGI:106512	protein coding gene	proline-rich nuclear receptor coactivator 2
4	pseudogene	135.8913	135.8915	negative	MGI_C57BL6J_3651355	Gm13006	ENSEMBL:ENSMUSG00000083430	MGI:3651355	pseudogene	predicted gene 13006
4	gene	135.8952	135.9202	positive	MGI_C57BL6J_104650	Cnr2	NCBI_Gene:12802,ENSEMBL:ENSMUSG00000062585	MGI:104650	protein coding gene	cannabinoid receptor 2 (macrophage)
4	gene	135.9207	135.9403	positive	MGI_C57BL6J_95593	Fuca1	NCBI_Gene:71665,ENSEMBL:ENSMUSG00000028673	MGI:95593	protein coding gene	fucosidase, alpha-L- 1, tissue
4	gene	135.9464	135.9626	positive	MGI_C57BL6J_96158	Hmgcl	NCBI_Gene:15356,ENSEMBL:ENSMUSG00000028672	MGI:96158	protein coding gene	3-hydroxy-3-methylglutaryl-Coenzyme A lyase
4	gene	135.9637	135.9682	positive	MGI_C57BL6J_1921496	Gale	NCBI_Gene:74246,ENSEMBL:ENSMUSG00000028671	MGI:1921496	protein coding gene	galactose-4-epimerase, UDP
4	gene	135.9682	135.9726	negative	MGI_C57BL6J_1347000	Lypla2	NCBI_Gene:26394,ENSEMBL:ENSMUSG00000028670	MGI:1347000	protein coding gene	lysophospholipase 2
4	gene	135.9755	135.9873	negative	MGI_C57BL6J_1913443	Pithd1	NCBI_Gene:66193,ENSEMBL:ENSMUSG00000028669	MGI:1913443	protein coding gene	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
4	pseudogene	135.9975	135.9979	positive	MGI_C57BL6J_3649722	Gm13007	NCBI_Gene:669445,ENSEMBL:ENSMUSG00000083852	MGI:3649722	pseudogene	predicted gene 13007
4	gene	136.0034	136.0218	negative	MGI_C57BL6J_1351315	Eloa	NCBI_Gene:27224,ENSEMBL:ENSMUSG00000028668	MGI:1351315	protein coding gene	elongin A
4	gene	136.0036	136.0109	positive	MGI_C57BL6J_3702670	Gm13008	ENSEMBL:ENSMUSG00000085714	MGI:3702670	lncRNA gene	predicted gene 13008
4	gene	136.0181	136.0185	negative	MGI_C57BL6J_5454139	Gm24362	ENSEMBL:ENSMUSG00000097995	MGI:5454139	lncRNA gene	predicted gene, 24362
4	gene	136.0283	136.0534	negative	MGI_C57BL6J_1914275	Rpl11	NCBI_Gene:67025,ENSEMBL:ENSMUSG00000059291	MGI:1914275	protein coding gene	ribosomal protein L11
4	pseudogene	136.0745	136.0750	negative	MGI_C57BL6J_3651086	Gm13009	ENSEMBL:ENSMUSG00000082877	MGI:3651086	pseudogene	predicted gene 13009
4	gene	136.1375	136.1376	positive	MGI_C57BL6J_5455778	Gm26001	ENSEMBL:ENSMUSG00000088614	MGI:5455778	snRNA gene	predicted gene, 26001
4	gene	136.1386	136.1434	negative	MGI_C57BL6J_5625214	Gm42329	NCBI_Gene:105247187	MGI:5625214	lncRNA gene	predicted gene, 42329
4	gene	136.1435	136.1458	positive	MGI_C57BL6J_96398	Id3	NCBI_Gene:15903,ENSEMBL:ENSMUSG00000007872	MGI:96398	protein coding gene	inhibitor of DNA binding 3
4	gene	136.1723	136.1961	positive	MGI_C57BL6J_1096341	E2f2	NCBI_Gene:242705,ENSEMBL:ENSMUSG00000018983	MGI:1096341	protein coding gene	E2F transcription factor 2
4	gene	136.2063	136.2466	positive	MGI_C57BL6J_2684986	Asap3	NCBI_Gene:230837,ENSEMBL:ENSMUSG00000036995	MGI:2684986	protein coding gene	ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
4	gene	136.2145	136.2166	positive	MGI_C57BL6J_2441962	D230019A03Rik	NA	NA	unclassified gene	RIKEN cDNA D230019A03 gene
4	gene	136.2477	136.2749	positive	MGI_C57BL6J_1196908	Tcea3	NCBI_Gene:21401,ENSEMBL:ENSMUSG00000001604	MGI:1196908	protein coding gene	transcription elongation factor A (SII), 3
4	gene	136.2842	136.2939	positive	MGI_C57BL6J_99192	Zfp46	NCBI_Gene:22704,ENSEMBL:ENSMUSG00000051351	MGI:99192	protein coding gene	zinc finger protein 46
4	pseudogene	136.3074	136.3079	negative	MGI_C57BL6J_3650319	Gm13013	ENSEMBL:ENSMUSG00000081330	MGI:3650319	pseudogene	predicted gene 13013
4	gene	136.3109	136.3594	positive	MGI_C57BL6J_1891692	Hnrnpr	NCBI_Gene:74326,ENSEMBL:ENSMUSG00000066037	MGI:1891692	protein coding gene	heterogeneous nuclear ribonucleoprotein R
4	gene	136.3478	136.3494	negative	MGI_C57BL6J_5504137	Gm27022	ENSEMBL:ENSMUSG00000098155	MGI:5504137	lncRNA gene	predicted gene, 27022
4	gene	136.3503	136.3594	positive	MGI_C57BL6J_1918848	9130020K20Rik	NCBI_Gene:105247188	MGI:1918848	lncRNA gene	RIKEN cDNA 9130020K20 gene
4	gene	136.3558	136.3594	positive	MGI_C57BL6J_4937022	Gm17388	NA	NA	lncRNA gene	predicted gene%2c 17388
4	gene	136.3875	136.3890	positive	MGI_C57BL6J_5590454	Gm31295	NCBI_Gene:102633481	MGI:5590454	lncRNA gene	predicted gene, 31295
4	gene	136.4235	136.4444	positive	MGI_C57BL6J_96276	Htr1d	NCBI_Gene:15552,ENSEMBL:ENSMUSG00000070687	MGI:96276	protein coding gene	5-hydroxytryptamine (serotonin) receptor 1D
4	gene	136.4623	136.4640	positive	MGI_C57BL6J_2443447	6030445D17Rik	ENSEMBL:ENSMUSG00000066178	MGI:2443447	protein coding gene	RIKEN cDNA 6030445D17 gene
4	gene	136.4697	136.5548	positive	MGI_C57BL6J_107629	Luzp1	NCBI_Gene:269593,ENSEMBL:ENSMUSG00000001089	MGI:107629	protein coding gene	leucine zipper protein 1
4	gene	136.5505	136.6028	negative	MGI_C57BL6J_1196256	Kdm1a	NCBI_Gene:99982,ENSEMBL:ENSMUSG00000036940	MGI:1196256	protein coding gene	lysine (K)-specific demethylase 1A
4	pseudogene	136.5842	136.5847	negative	MGI_C57BL6J_3649751	Gm12987	ENSEMBL:ENSMUSG00000082711	MGI:3649751	pseudogene	predicted gene 12987
4	gene	136.6069	136.6133	positive	MGI_C57BL6J_1914913	Tex46	NCBI_Gene:67663,ENSEMBL:ENSMUSG00000036921	MGI:1914913	protein coding gene	testis expressed 46
4	pseudogene	136.6088	136.6099	negative	MGI_C57BL6J_3651584	Gm12986	NCBI_Gene:433770,ENSEMBL:ENSMUSG00000083054	MGI:3651584	pseudogene	predicted gene 12986
4	gene	136.6098	136.6099	negative	MGI_C57BL6J_5451957	Gm22180	ENSEMBL:ENSMUSG00000092747	MGI:5451957	miRNA gene	predicted gene, 22180
4	gene	136.6226	136.6398	positive	MGI_C57BL6J_2448566	Lactbl1	NCBI_Gene:242707,ENSEMBL:ENSMUSG00000070683	MGI:2448566	protein coding gene	lactamase, beta-like 1
4	gene	136.6396	136.6421	positive	MGI_C57BL6J_5610811	Gm37583	ENSEMBL:ENSMUSG00000103119	MGI:5610811	unclassified gene	predicted gene, 37583
4	gene	136.6475	136.8360	negative	MGI_C57BL6J_99611	Ephb2	NCBI_Gene:13844,ENSEMBL:ENSMUSG00000028664	MGI:99611	protein coding gene	Eph receptor B2
4	gene	136.8360	136.8421	positive	MGI_C57BL6J_5590695	Gm31536	NCBI_Gene:102633796	MGI:5590695	lncRNA gene	predicted gene, 31536
4	gene	136.8801	136.8862	negative	MGI_C57BL6J_88224	C1qb	NCBI_Gene:12260,ENSEMBL:ENSMUSG00000036905	MGI:88224	protein coding gene	complement component 1, q subcomponent, beta polypeptide
4	gene	136.8898	136.8931	negative	MGI_C57BL6J_88225	C1qc	NCBI_Gene:12262,ENSEMBL:ENSMUSG00000036896	MGI:88225	protein coding gene	complement component 1, q subcomponent, C chain
4	gene	136.8959	136.8988	negative	MGI_C57BL6J_88223	C1qa	NCBI_Gene:12259,ENSEMBL:ENSMUSG00000036887	MGI:88223	protein coding gene	complement component 1, q subcomponent, alpha polypeptide
4	gene	136.9294	136.9568	negative	MGI_C57BL6J_109378	Epha8	NCBI_Gene:13842,ENSEMBL:ENSMUSG00000028661	MGI:109378	protein coding gene	Eph receptor A8
4	gene	136.9797	137.0494	negative	MGI_C57BL6J_2682254	Zbtb40	NCBI_Gene:230848,ENSEMBL:ENSMUSG00000060862	MGI:2682254	protein coding gene	zinc finger and BTB domain containing 40
4	gene	137.0257	137.0258	positive	MGI_C57BL6J_5453611	Gm23834	ENSEMBL:ENSMUSG00000077624	MGI:5453611	snoRNA gene	predicted gene, 23834
4	gene	137.0766	137.0951	positive	MGI_C57BL6J_5590807	Gm31648	NCBI_Gene:102633949	MGI:5590807	lncRNA gene	predicted gene, 31648
4	gene	137.1167	137.1183	negative	MGI_C57BL6J_3702655	Gm13001	NCBI_Gene:102634021,ENSEMBL:ENSMUSG00000087417	MGI:3702655	lncRNA gene	predicted gene 13001
4	gene	137.1167	137.1176	negative	MGI_C57BL6J_1921513	1700037C06Rik	ENSEMBL:ENSMUSG00000085542	MGI:1921513	lncRNA gene	RIKEN cDNA 1700037C06 gene
4	gene	137.1395	137.1425	negative	MGI_C57BL6J_5590921	Gm31762	NCBI_Gene:102634099	MGI:5590921	lncRNA gene	predicted gene, 31762
4	gene	137.1591	137.1651	negative	MGI_C57BL6J_3650099	Gm13003	NCBI_Gene:100503595,ENSEMBL:ENSMUSG00000085833	MGI:3650099	lncRNA gene	predicted gene 13003
4	gene	137.1713	137.1781	negative	MGI_C57BL6J_5826509	Gm46872	NCBI_Gene:108168981	MGI:5826509	lncRNA gene	predicted gene, 46872
4	gene	137.1840	137.1841	positive	MGI_C57BL6J_5455176	Gm25399	ENSEMBL:ENSMUSG00000093294	MGI:5455176	miRNA gene	predicted gene, 25399
4	gene	137.1841	137.1841	positive	MGI_C57BL6J_5453040	Gm23263	ENSEMBL:ENSMUSG00000092848	MGI:5453040	miRNA gene	predicted gene, 23263
4	gene	137.1841	137.2528	negative	MGI_C57BL6J_5590979	Gm31820	NCBI_Gene:102634171	MGI:5590979	lncRNA gene	predicted gene, 31820
4	pseudogene	137.2190	137.2204	negative	MGI_C57BL6J_3650102	Gm13005	NCBI_Gene:100047000,ENSEMBL:ENSMUSG00000080806	MGI:3650102	pseudogene	predicted gene 13005
4	pseudogene	137.2226	137.2233	negative	MGI_C57BL6J_3650101	Gm13002	ENSEMBL:ENSMUSG00000082149	MGI:3650101	pseudogene	predicted gene 13002
4	gene	137.2775	137.2997	positive	MGI_C57BL6J_98957	Wnt4	NCBI_Gene:22417,ENSEMBL:ENSMUSG00000036856	MGI:98957	protein coding gene	wingless-type MMTV integration site family, member 4
4	gene	137.3197	137.3578	negative	MGI_C57BL6J_106211	Cdc42	NCBI_Gene:12540,ENSEMBL:ENSMUSG00000006699	MGI:106211	protein coding gene	cell division cycle 42
4	gene	137.3256	137.3256	positive	MGI_C57BL6J_5455549	Gm25772	ENSEMBL:ENSMUSG00000089199	MGI:5455549	snRNA gene	predicted gene, 25772
4	gene	137.3364	137.3401	negative	MGI_C57BL6J_2441797	A430061O12Rik	NA	NA	unclassified gene	RIKEN cDNA A430061O12 gene
4	gene	137.3873	137.3884	negative	MGI_C57BL6J_1917225	2810405F17Rik	ENSEMBL:ENSMUSG00000101493	MGI:1917225	lncRNA gene	RIKEN cDNA 2810405F17 gene
4	pseudogene	137.3953	137.3957	positive	MGI_C57BL6J_3650100	Rpl31-ps10	NCBI_Gene:665533,ENSEMBL:ENSMUSG00000070667	MGI:3650100	pseudogene	ribosomal protein L31, pseudogene 10
4	gene	137.4016	137.4098	negative	MGI_C57BL6J_3651647	Cela3a	NCBI_Gene:242711,ENSEMBL:ENSMUSG00000078520	MGI:3651647	protein coding gene	chymotrypsin-like elastase family, member 3A
4	gene	137.4210	137.4305	negative	MGI_C57BL6J_1915118	Cela3b	NCBI_Gene:67868,ENSEMBL:ENSMUSG00000023433	MGI:1915118	protein coding gene	chymotrypsin-like elastase family, member 3B
4	gene	137.4366	137.4671	negative	MGI_C57BL6J_3651180	Gm13010	NCBI_Gene:105247191,ENSEMBL:ENSMUSG00000086845	MGI:3651180	lncRNA gene	predicted gene 13010
4	gene	137.4533	137.4555	positive	MGI_C57BL6J_1916630	1700013G24Rik	NCBI_Gene:69380,ENSEMBL:ENSMUSG00000041399	MGI:1916630	protein coding gene	RIKEN cDNA 1700013G24 gene
4	gene	137.4688	137.5706	positive	MGI_C57BL6J_96257	Hspg2	NCBI_Gene:15530,ENSEMBL:ENSMUSG00000028763	MGI:96257	protein coding gene	perlecan (heparan sulfate proteoglycan 2)
4	gene	137.5383	137.5384	positive	MGI_C57BL6J_5530988	Mir7018	miRBase:MI0022867,NCBI_Gene:102465616,ENSEMBL:ENSMUSG00000099134	MGI:5530988	miRNA gene	microRNA 7018
4	gene	137.5707	137.5824	negative	MGI_C57BL6J_3588210	Ldlrad2	NCBI_Gene:435811,ENSEMBL:ENSMUSG00000094035	MGI:3588210	protein coding gene	low density lipoprotein receptor class A domain containing 2
4	gene	137.5938	137.6585	positive	MGI_C57BL6J_2158502	Usp48	NCBI_Gene:170707,ENSEMBL:ENSMUSG00000043411	MGI:2158502	protein coding gene	ubiquitin specific peptidase 48
4	gene	137.6647	137.7299	positive	MGI_C57BL6J_109338	Rap1gap	NCBI_Gene:110351,ENSEMBL:ENSMUSG00000041351	MGI:109338	protein coding gene	Rap1 GTPase-activating protein
4	gene	137.6970	137.7074	negative	MGI_C57BL6J_1917058	Rap1gapos	NCBI_Gene:69808,ENSEMBL:ENSMUSG00000087476	MGI:1917058	antisense lncRNA gene	RAP1 GTPase activating protein, opposite strand
4	gene	137.7417	137.7964	negative	MGI_C57BL6J_87983	Alpl	NCBI_Gene:11647,ENSEMBL:ENSMUSG00000028766	MGI:87983	protein coding gene	alkaline phosphatase, liver/bone/kidney
4	gene	137.8063	137.8120	negative	MGI_C57BL6J_5591238	Gm32079	NCBI_Gene:102634516	MGI:5591238	lncRNA gene	predicted gene, 32079
4	gene	137.8622	137.9652	positive	MGI_C57BL6J_1101357	Ece1	NCBI_Gene:230857,ENSEMBL:ENSMUSG00000057530	MGI:1101357	protein coding gene	endothelin converting enzyme 1
4	gene	137.8820	137.8839	negative	MGI_C57BL6J_3652270	Gm13012	NCBI_Gene:102634683,ENSEMBL:ENSMUSG00000085823	MGI:3652270	lncRNA gene	predicted gene 13012
4	gene	137.9154	137.9155	negative	MGI_C57BL6J_1921862	4833410I11Rik	NA	NA	unclassified gene	RIKEN cDNA 4833410I11 gene
4	gene	137.9918	137.9923	positive	MGI_C57BL6J_3035105	BE691133	NA	NA	unclassified gene	expressed sequence BE691133
4	gene	137.9930	138.2085	positive	MGI_C57BL6J_1923935	Eif4g3	NCBI_Gene:230861,ENSEMBL:ENSMUSG00000028760	MGI:1923935	protein coding gene	eukaryotic translation initiation factor 4 gamma, 3
4	gene	137.9942	138.0279	positive	MGI_C57BL6J_5591553	Gm32394	NCBI_Gene:102634927	MGI:5591553	lncRNA gene	predicted gene, 32394
4	gene	138.0140	138.0184	positive	MGI_C57BL6J_3611235	8030494B02Rik	NA	NA	unclassified non-coding RNA gene	Riken cDNA 8030494B02 gene
4	gene	138.1376	138.1385	negative	MGI_C57BL6J_1920813	1700095J12Rik	NCBI_Gene:73563,ENSEMBL:ENSMUSG00000084804	MGI:1920813	lncRNA gene	RIKEN cDNA 1700095J12 gene
4	gene	138.1632	138.1633	positive	MGI_C57BL6J_5531049	Mir6399	miRBase:MI0021935,NCBI_Gene:102466907,ENSEMBL:ENSMUSG00000098513	MGI:5531049	miRNA gene	microRNA 6399
4	gene	138.2157	138.2162	positive	MGI_C57BL6J_1916844	2310026L22Rik	ENSEMBL:ENSMUSG00000078519	MGI:1916844	lncRNA gene	RIKEN cDNA 2310026L22 gene
4	gene	138.2163	138.2447	positive	MGI_C57BL6J_109369	Hp1bp3	NCBI_Gene:15441,ENSEMBL:ENSMUSG00000028759	MGI:109369	protein coding gene	heterochromatin protein 1, binding protein 3
4	gene	138.2504	138.2613	positive	MGI_C57BL6J_2446215	Sh2d5	NCBI_Gene:230863,ENSEMBL:ENSMUSG00000045349	MGI:2446215	protein coding gene	SH2 domain containing 5
4	gene	138.2504	138.3020	positive	MGI_C57BL6J_1098229	Kif17	NCBI_Gene:16559,ENSEMBL:ENSMUSG00000028758	MGI:1098229	protein coding gene	kinesin family member 17
4	gene	138.3047	138.3126	positive	MGI_C57BL6J_1194508	Ddost	NCBI_Gene:13200,ENSEMBL:ENSMUSG00000028757	MGI:1194508	protein coding gene	dolichyl-di-phosphooligosaccharide-protein glycotransferase
4	gene	138.3134	138.3263	negative	MGI_C57BL6J_1916193	Pink1	NCBI_Gene:68943,ENSEMBL:ENSMUSG00000028756	MGI:1916193	protein coding gene	PTEN induced putative kinase 1
4	gene	138.3161	138.3162	negative	MGI_C57BL6J_5531329	Mir7019	miRBase:MI0022868,NCBI_Gene:102466788,ENSEMBL:ENSMUSG00000099200	MGI:5531329	miRNA gene	microRNA 7019
4	gene	138.3260	138.3261	negative	MGI_C57BL6J_5531028	Gm27646	ENSEMBL:ENSMUSG00000098364	MGI:5531028	miRNA gene	predicted gene, 27646
4	gene	138.3384	138.3683	negative	MGI_C57BL6J_1919519	Cda	NCBI_Gene:72269,ENSEMBL:ENSMUSG00000028755	MGI:1919519	protein coding gene	cytidine deaminase
4	gene	138.3941	138.3965	negative	MGI_C57BL6J_3651622	Fam43b	NCBI_Gene:625638,ENSEMBL:ENSMUSG00000078235	MGI:3651622	protein coding gene	family with sequence similarity 43, member B
4	gene	138.3952	138.3977	positive	MGI_C57BL6J_1931024	AB041806	ENSEMBL:ENSMUSG00000046109	MGI:1931024	lncRNA gene	hypothetical protein, MNCb-2457
4	pseudogene	138.4257	138.4260	positive	MGI_C57BL6J_3649580	Rpl38-ps1	NCBI_Gene:625646,ENSEMBL:ENSMUSG00000083326	MGI:3649580	pseudogene	ribosomal protein L38, pseudogene 1
4	gene	138.4347	138.4423	positive	MGI_C57BL6J_1915600	Mul1	NCBI_Gene:68350,ENSEMBL:ENSMUSG00000041241	MGI:1915600	protein coding gene	mitochondrial ubiquitin ligase activator of NFKB 1
4	gene	138.4543	138.4601	positive	MGI_C57BL6J_1913509	Camk2n1	NCBI_Gene:66259,ENSEMBL:ENSMUSG00000046447	MGI:1913509	protein coding gene	calcium/calmodulin-dependent protein kinase II inhibitor 1
4	gene	138.4976	138.5285	positive	MGI_C57BL6J_5591708	Gm32549	NCBI_Gene:102635131	MGI:5591708	lncRNA gene	predicted gene, 32549
4	gene	138.5642	138.6359	negative	MGI_C57BL6J_1922968	Vwa5b1	NCBI_Gene:75718,ENSEMBL:ENSMUSG00000028753	MGI:1922968	protein coding gene	von Willebrand factor A domain containing 5B1
4	gene	138.5876	138.5877	negative	MGI_C57BL6J_5452738	Gm22961	ENSEMBL:ENSMUSG00000088589	MGI:5452738	snRNA gene	predicted gene, 22961
4	gene	138.6390	138.6576	positive	MGI_C57BL6J_5591821	Gm32662	NCBI_Gene:102635281	MGI:5591821	lncRNA gene	predicted gene, 32662
4	gene	138.6775	138.7117	positive	MGI_C57BL6J_5591929	Gm32770	NCBI_Gene:102635431	MGI:5591929	lncRNA gene	predicted gene, 32770
4	gene	138.6778	138.6782	positive	MGI_C57BL6J_1914908	4930563F15Rik	NA	NA	unclassified gene	RIKEN cDNA 4930563F15 gene
4	gene	138.7098	138.7384	negative	MGI_C57BL6J_2443123	Ubxn10	NCBI_Gene:212190,ENSEMBL:ENSMUSG00000043621	MGI:2443123	protein coding gene	UBX domain protein 10
4	gene	138.7248	138.7461	positive	MGI_C57BL6J_106638	Pla2g2c	NCBI_Gene:18781,ENSEMBL:ENSMUSG00000028750	MGI:106638	protein coding gene	phospholipase A2, group IIC
4	gene	138.7505	138.7576	negative	MGI_C57BL6J_1349661	Pla2g2f	NCBI_Gene:26971,ENSEMBL:ENSMUSG00000028749	MGI:1349661	protein coding gene	phospholipase A2, group IIF
4	gene	138.7614	138.7697	negative	MGI_C57BL6J_5625217	Gm42332	NCBI_Gene:105247193	MGI:5625217	lncRNA gene	predicted gene, 42332
4	gene	138.7725	138.7802	negative	MGI_C57BL6J_5592030	Gm32871	NCBI_Gene:102635577	MGI:5592030	lncRNA gene	predicted gene, 32871
4	gene	138.7757	138.7821	positive	MGI_C57BL6J_1341796	Pla2g2d	NCBI_Gene:18782,ENSEMBL:ENSMUSG00000041202	MGI:1341796	protein coding gene	phospholipase A2, group IID
4	gene	138.7992	138.8635	negative	MGI_C57BL6J_101899	Pla2g5	NCBI_Gene:18784,ENSEMBL:ENSMUSG00000041193	MGI:101899	protein coding gene	phospholipase A2, group V
4	gene	138.8274	138.8275	negative	MGI_C57BL6J_5455057	Gm25280	ENSEMBL:ENSMUSG00000087894	MGI:5455057	snRNA gene	predicted gene, 25280
4	pseudogene	138.8319	138.8352	positive	MGI_C57BL6J_104642	Pla2g2a	NCBI_Gene:18780,ENSEMBL:ENSMUSG00000058908	MGI:104642	polymorphic pseudogene	phospholipase A2, group IIA (platelets, synovial fluid)
4	gene	138.8635	138.8686	positive	MGI_C57BL6J_5592089	Gm32930	NCBI_Gene:102635643	MGI:5592089	lncRNA gene	predicted gene, 32930
4	gene	138.8710	138.8740	negative	MGI_C57BL6J_3651765	Gm13030	NCBI_Gene:105734733,ENSEMBL:ENSMUSG00000078518	MGI:3651765	protein coding gene	predicted gene 13030
4	gene	138.8779	138.8828	positive	MGI_C57BL6J_1349660	Pla2g2e	NCBI_Gene:26970,ENSEMBL:ENSMUSG00000028751	MGI:1349660	protein coding gene	phospholipase A2, group IIE
4	gene	138.8911	138.9140	negative	MGI_C57BL6J_1920412	Otud3	NCBI_Gene:73162,ENSEMBL:ENSMUSG00000041161	MGI:1920412	protein coding gene	OTU domain containing 3
4	pseudogene	138.9352	138.9357	negative	MGI_C57BL6J_5010282	Gm18097	NCBI_Gene:100416403	MGI:5010282	pseudogene	predicted gene, 18097
4	gene	138.9364	138.9386	negative	MGI_C57BL6J_5592170	Gm33011	NCBI_Gene:102635752	MGI:5592170	lncRNA gene	predicted gene, 33011
4	gene	138.9619	138.9647	negative	MGI_C57BL6J_5625218	Gm42333	NCBI_Gene:105247194	MGI:5625218	lncRNA gene	predicted gene, 42333
4	gene	138.9671	138.9684	positive	MGI_C57BL6J_1914075	Rnf186	NCBI_Gene:66825,ENSEMBL:ENSMUSG00000070661	MGI:1914075	protein coding gene	ring finger protein 186
4	gene	138.9721	139.0592	positive	MGI_C57BL6J_1924306	Tmco4	NCBI_Gene:77056,ENSEMBL:ENSMUSG00000041143	MGI:1924306	protein coding gene	transmembrane and coiled-coil domains 4
4	gene	139.0032	139.0196	negative	MGI_C57BL6J_5592373	Gm33214	NCBI_Gene:102636025	MGI:5592373	lncRNA gene	predicted gene, 33214
4	gene	139.0597	139.0756	negative	MGI_C57BL6J_1196627	Htr6	NCBI_Gene:15565,ENSEMBL:ENSMUSG00000028747	MGI:1196627	protein coding gene	5-hydroxytryptamine (serotonin) receptor 6
4	gene	139.0749	139.0772	positive	MGI_C57BL6J_5791369	Gm45533	NCBI_Gene:108168960,ENSEMBL:ENSMUSG00000110296	MGI:5791369	lncRNA gene	predicted gene 45533
4	gene	139.0823	139.0930	negative	MGI_C57BL6J_104591	Nbl1	NCBI_Gene:17965,ENSEMBL:ENSMUSG00000041120	MGI:104591	protein coding gene	NBL1, DAN family BMP antagonist
4	gene	139.1018	139.1311	negative	MGI_C57BL6J_1913628	Micos10	NCBI_Gene:433771,ENSEMBL:ENSMUSG00000050608	MGI:1913628	protein coding gene	mitochondrial contact site and cristae organizing system subunit 10
4	gene	139.1341	139.1653	negative	MGI_C57BL6J_5592463	Gm33304	NCBI_Gene:102636159	MGI:5592463	lncRNA gene	predicted gene, 33304
4	pseudogene	139.1502	139.1508	positive	MGI_C57BL6J_1935164	Hspe1-ps4	NCBI_Gene:93751,ENSEMBL:ENSMUSG00000083238	MGI:1935164	pseudogene	heat shock protein 1 (chaperonin 10), pseudogene 4
4	gene	139.1754	139.1807	negative	MGI_C57BL6J_3650322	Gm16287	NCBI_Gene:100038595,ENSEMBL:ENSMUSG00000073739	MGI:3650322	lncRNA gene	predicted gene 16287
4	gene	139.1922	139.1927	negative	MGI_C57BL6J_1925704	9530077C14Rik	NA	NA	unclassified gene	RIKEN cDNA 9530077C14 gene
4	gene	139.1929	139.2918	positive	MGI_C57BL6J_104652	Capzb	NCBI_Gene:12345,ENSEMBL:ENSMUSG00000028745	MGI:104652	protein coding gene	capping protein (actin filament) muscle Z-line, beta
4	gene	139.2940	139.3107	negative	MGI_C57BL6J_2384837	Pqlc2	NCBI_Gene:212555,ENSEMBL:ENSMUSG00000028744	MGI:2384837	protein coding gene	PQ loop repeat containing 2
4	gene	139.3107	139.3188	positive	MGI_C57BL6J_107796	Akr7a5	NCBI_Gene:110198,ENSEMBL:ENSMUSG00000028743	MGI:107796	protein coding gene	aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase)
4	gene	139.3382	139.3383	positive	MGI_C57BL6J_5455509	Gm25732	ENSEMBL:ENSMUSG00000092909	MGI:5455509	miRNA gene	predicted gene, 25732
4	gene	139.3383	139.3384	positive	MGI_C57BL6J_5454022	Gm24245	ENSEMBL:ENSMUSG00000087943	MGI:5454022	miRNA gene	predicted gene, 24245
4	pseudogene	139.3422	139.3433	positive	MGI_C57BL6J_3652310	Gm13019	ENSEMBL:ENSMUSG00000083404	MGI:3652310	pseudogene	predicted gene 13019
4	pseudogene	139.3444	139.3463	negative	MGI_C57BL6J_1100505	Ccnd3-ps	NCBI_Gene:626000,ENSEMBL:ENSMUSG00000080708	MGI:1100505	pseudogene	cyclin D3, pseudogene
4	gene	139.3474	139.3526	negative	MGI_C57BL6J_1917152	Mrto4	NCBI_Gene:69902,ENSEMBL:ENSMUSG00000028741	MGI:1917152	protein coding gene	mRNA turnover 4, ribosome maturation factor
4	gene	139.3526	139.3787	positive	MGI_C57BL6J_2443696	Emc1	NCBI_Gene:230866,ENSEMBL:ENSMUSG00000078517	MGI:2443696	protein coding gene	ER membrane protein complex subunit 1
4	gene	139.3526	139.4896	positive	MGI_C57BL6J_1916366	Ubr4	NCBI_Gene:69116,ENSEMBL:ENSMUSG00000066036	MGI:1916366	protein coding gene	ubiquitin protein ligase E3 component n-recognin 4
4	gene	139.3765	139.3804	negative	MGI_C57BL6J_1919807	2700016F22Rik	ENSEMBL:ENSMUSG00000097731	MGI:1919807	lncRNA gene	RIKEN cDNA 2700016F22 gene
4	gene	139.4305	139.4306	negative	MGI_C57BL6J_4414084	n-TVaac1	NCBI_Gene:102467443	MGI:4414084	tRNA gene	nuclear encoded tRNA valine 1 (anticodon AAC)
4	gene	139.5305	139.6204	positive	MGI_C57BL6J_2140675	Iffo2	NCBI_Gene:212632,ENSEMBL:ENSMUSG00000041025	MGI:2140675	protein coding gene	intermediate filament family orphan 2
4	gene	139.5889	139.5890	negative	MGI_C57BL6J_5455348	Gm25571	ENSEMBL:ENSMUSG00000094359	MGI:5455348	miRNA gene	predicted gene, 25571
4	gene	139.6032	139.6627	positive	MGI_C57BL6J_5439438	Gm21969	ENSEMBL:ENSMUSG00000094439	MGI:5439438	protein coding gene	predicted gene 21969
4	gene	139.6229	139.6497	positive	MGI_C57BL6J_2443883	Aldh4a1	NCBI_Gene:212647,ENSEMBL:ENSMUSG00000028737	MGI:2443883	protein coding gene	aldehyde dehydrogenase 4 family, member A1
4	gene	139.6440	139.6441	positive	MGI_C57BL6J_5531141	Mir7020	miRBase:MI0022869,NCBI_Gene:102465617,ENSEMBL:ENSMUSG00000098569	MGI:5531141	miRNA gene	microRNA 7020
4	gene	139.6535	139.6703	positive	MGI_C57BL6J_1933546	Tas1r2	NCBI_Gene:83770,ENSEMBL:ENSMUSG00000028738	MGI:1933546	protein coding gene	taste receptor, type 1, member 2
4	gene	139.7350	139.7357	positive	MGI_C57BL6J_5625219	Gm42334	NCBI_Gene:105247195	MGI:5625219	lncRNA gene	predicted gene, 42334
4	gene	139.7371	139.8335	negative	MGI_C57BL6J_97491	Pax7	NCBI_Gene:18509,ENSEMBL:ENSMUSG00000028736	MGI:97491	protein coding gene	paired box 7
4	gene	139.8331	139.8529	positive	MGI_C57BL6J_5826510	Gm46873	NCBI_Gene:108168982	MGI:5826510	lncRNA gene	predicted gene, 46873
4	gene	139.9105	139.9344	positive	MGI_C57BL6J_2686513	Gm1667	NCBI_Gene:102636380,ENSEMBL:ENSMUSG00000087646	MGI:2686513	lncRNA gene	predicted gene 1667
4	gene	139.9233	139.9332	positive	MGI_C57BL6J_3651504	Gm13028	ENSEMBL:ENSMUSG00000087628	MGI:3651504	lncRNA gene	predicted gene 13028
4	gene	139.9261	139.9435	negative	MGI_C57BL6J_1918485	4933427I22Rik	NCBI_Gene:71235,ENSEMBL:ENSMUSG00000085928	MGI:1918485	lncRNA gene	RIKEN cDNA 4933427I22 gene
4	gene	139.9602	139.9680	negative	MGI_C57BL6J_2444612	Klhdc7a	NCBI_Gene:242721,ENSEMBL:ENSMUSG00000078234	MGI:2444612	protein coding gene	kelch domain containing 7A
4	gene	139.9675	139.9676	negative	MGI_C57BL6J_4358926	Mir2139	miRBase:MI0010752,NCBI_Gene:100316727,ENSEMBL:ENSMUSG00000089294	MGI:4358926	miRNA gene	microRNA 2139
4	gene	140.0268	140.2469	negative	MGI_C57BL6J_2681842	Igsf21	NCBI_Gene:230868,ENSEMBL:ENSMUSG00000040972	MGI:2681842	protein coding gene	immunoglobulin superfamily, member 21
4	gene	140.1086	140.1450	positive	MGI_C57BL6J_3651764	Gm13029	NCBI_Gene:102636673,ENSEMBL:ENSMUSG00000086164	MGI:3651764	lncRNA gene	predicted gene 13029
4	gene	140.1319	140.1334	positive	MGI_C57BL6J_3651912	Gm13027	ENSEMBL:ENSMUSG00000085968	MGI:3651912	lncRNA gene	predicted gene 13027
4	gene	140.2185	140.2225	positive	MGI_C57BL6J_5592701	Gm33542	NCBI_Gene:102636490	MGI:5592701	lncRNA gene	predicted gene, 33542
4	gene	140.3207	140.3233	negative	MGI_C57BL6J_3642724	Gm9867	ENSEMBL:ENSMUSG00000103107	MGI:3642724	lncRNA gene	predicted gene 9867
4	gene	140.3234	140.3305	positive	MGI_C57BL6J_5593054	Gm33895	NCBI_Gene:102636971	MGI:5593054	lncRNA gene	predicted gene, 33895
4	gene	140.3554	140.3619	positive	MGI_C57BL6J_5593233	Gm34074	NCBI_Gene:102637201	MGI:5593233	lncRNA gene	predicted gene, 34074
4	gene	140.3805	140.3864	positive	MGI_C57BL6J_3650527	Gm13016	NCBI_Gene:329970,ENSEMBL:ENSMUSG00000087084	MGI:3650527	lncRNA gene	predicted gene 13016
4	gene	140.3904	140.3969	positive	MGI_C57BL6J_3650528	Gm13017	NCBI_Gene:102637278,ENSEMBL:ENSMUSG00000086960	MGI:3650528	lncRNA gene	predicted gene 13017
4	gene	140.4225	140.4319	positive	MGI_C57BL6J_3649637	Gm13021	NCBI_Gene:102637389,ENSEMBL:ENSMUSG00000086437	MGI:3649637	lncRNA gene	predicted gene 13021
4	gene	140.4380	140.4613	positive	MGI_C57BL6J_3650881	Gm13026	ENSEMBL:ENSMUSG00000085047	MGI:3650881	lncRNA gene	predicted gene 13026
4	pseudogene	140.4458	140.4462	negative	MGI_C57BL6J_6324716	Gm50453	ENSEMBL:ENSMUSG00000118416	MGI:6324716	pseudogene	predicted gene, 50453
4	gene	140.5145	140.6660	negative	MGI_C57BL6J_1920004	Arhgef10l	NCBI_Gene:72754,ENSEMBL:ENSMUSG00000040964	MGI:1920004	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 10-like
4	gene	140.6051	140.6066	positive	MGI_C57BL6J_5625220	Gm42335	NCBI_Gene:105247196	MGI:5625220	lncRNA gene	predicted gene, 42335
4	gene	140.6797	140.6863	positive	MGI_C57BL6J_3650883	Gm13025	NCBI_Gene:102637546,ENSEMBL:ENSMUSG00000086159	MGI:3650883	lncRNA gene	predicted gene 13025
4	gene	140.6927	140.6928	positive	MGI_C57BL6J_5452822	Gm23045	ENSEMBL:ENSMUSG00000095878	MGI:5452822	miRNA gene	predicted gene, 23045
4	gene	140.7005	140.7232	positive	MGI_C57BL6J_1919784	Rcc2	NCBI_Gene:108911,ENSEMBL:ENSMUSG00000040945	MGI:1919784	protein coding gene	regulator of chromosome condensation 2
4	gene	140.7170	140.7171	positive	MGI_C57BL6J_5455728	Gm25951	ENSEMBL:ENSMUSG00000093071	MGI:5455728	miRNA gene	predicted gene, 25951
4	gene	140.7274	140.7426	negative	MGI_C57BL6J_2655198	Padi6	NCBI_Gene:242726,ENSEMBL:ENSMUSG00000040935	MGI:2655198	protein coding gene	peptidyl arginine deiminase, type VI
4	gene	140.7455	140.7742	negative	MGI_C57BL6J_1338898	Padi4	NCBI_Gene:18602,ENSEMBL:ENSMUSG00000025330	MGI:1338898	protein coding gene	peptidyl arginine deiminase, type IV
4	gene	140.7854	140.8106	negative	MGI_C57BL6J_1338891	Padi3	NCBI_Gene:18601,ENSEMBL:ENSMUSG00000025328	MGI:1338891	protein coding gene	peptidyl arginine deiminase, type III
4	gene	140.8110	140.8175	positive	MGI_C57BL6J_3702685	Gm13032	NCBI_Gene:100049161,ENSEMBL:ENSMUSG00000085918	MGI:3702685	lncRNA gene	predicted gene 13032
4	gene	140.8130	140.8458	negative	MGI_C57BL6J_1338893	Padi1	NCBI_Gene:18599,ENSEMBL:ENSMUSG00000025329	MGI:1338893	protein coding gene	peptidyl arginine deiminase, type I
4	gene	140.8727	140.8781	positive	MGI_C57BL6J_1922378	4930515B02Rik	NCBI_Gene:75128,ENSEMBL:ENSMUSG00000087045	MGI:1922378	lncRNA gene	RIKEN cDNA 4930515B02 gene
4	gene	140.9063	140.9526	positive	MGI_C57BL6J_1338892	Padi2	NCBI_Gene:18600,ENSEMBL:ENSMUSG00000028927	MGI:1338892	protein coding gene	peptidyl arginine deiminase, type II
4	gene	140.9090	140.9103	negative	MGI_C57BL6J_5826356	Gm46719	NCBI_Gene:108168688	MGI:5826356	lncRNA gene	predicted gene, 46719
4	gene	140.9187	140.9188	positive	MGI_C57BL6J_5456003	Gm26226	ENSEMBL:ENSMUSG00000064443	MGI:5456003	snRNA gene	predicted gene, 26226
4	gene	140.9272	140.9321	negative	MGI_C57BL6J_5593534	Gm34375	NCBI_Gene:102637611	MGI:5593534	lncRNA gene	predicted gene, 34375
4	gene	140.9477	140.9579	negative	MGI_C57BL6J_3702680	Gm13031	NCBI_Gene:100126227,ENSEMBL:ENSMUSG00000087698	MGI:3702680	lncRNA gene	predicted gene 13031
4	gene	140.9604	140.9613	negative	MGI_C57BL6J_5593590	Gm34431	NCBI_Gene:102637683	MGI:5593590	lncRNA gene	predicted gene, 34431
4	gene	140.9612	140.9792	positive	MGI_C57BL6J_1914930	Sdhb	NCBI_Gene:67680,ENSEMBL:ENSMUSG00000009863	MGI:1914930	protein coding gene	succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
4	gene	140.9869	141.0077	positive	MGI_C57BL6J_1922022	Atp13a2	NCBI_Gene:74772,ENSEMBL:ENSMUSG00000036622	MGI:1922022	protein coding gene	ATPase type 13A2
4	gene	141.0104	141.0160	positive	MGI_C57BL6J_99559	Mfap2	NCBI_Gene:17150,ENSEMBL:ENSMUSG00000060572	MGI:99559	protein coding gene	microfibrillar-associated protein 2
4	gene	141.0166	141.0606	negative	MGI_C57BL6J_3529431	Crocc	NCBI_Gene:230872,ENSEMBL:ENSMUSG00000040860	MGI:3529431	protein coding gene	ciliary rootlet coiled-coil, rootletin
4	gene	141.0665	141.0784	negative	MGI_C57BL6J_1913397	Necap2	NCBI_Gene:66147,ENSEMBL:ENSMUSG00000028923	MGI:1913397	protein coding gene	NECAP endocytosis associated 2
4	pseudogene	141.0848	141.0857	positive	MGI_C57BL6J_3651114	Gm13047	NCBI_Gene:638991,ENSEMBL:ENSMUSG00000082246	MGI:3651114	pseudogene	predicted gene 13047
4	gene	141.0883	141.1128	positive	MGI_C57BL6J_3607787	Spata21	NCBI_Gene:329972,ENSEMBL:ENSMUSG00000045004	MGI:3607787	protein coding gene	spermatogenesis associated 21
4	gene	141.1130	141.1398	negative	MGI_C57BL6J_1098672	Szrd1	NCBI_Gene:213491,ENSEMBL:ENSMUSG00000040842	MGI:1098672	protein coding gene	SUZ RNA binding domain containing 1
4	gene	141.1157	141.1181	positive	MGI_C57BL6J_3704238	4921514A10Rik	ENSEMBL:ENSMUSG00000097620	MGI:3704238	lncRNA gene	RIKEN cDNA 4921514A10 gene
4	gene	141.1479	141.2041	positive	MGI_C57BL6J_1924992	Fbxo42	NCBI_Gene:213499,ENSEMBL:ENSMUSG00000028920	MGI:1924992	protein coding gene	F-box protein 42
4	gene	141.2137	141.2268	positive	MGI_C57BL6J_1923416	Cplane2	NCBI_Gene:76166,ENSEMBL:ENSMUSG00000073733	MGI:1923416	protein coding gene	ciliogenesis and planar polarity effector 2
4	gene	141.2382	141.2395	negative	MGI_C57BL6J_3641643	C630004L07Rik	ENSEMBL:ENSMUSG00000103366	MGI:3641643	unclassified gene	RIKEN cDNA C630004L07 gene
4	gene	141.2395	141.2579	positive	MGI_C57BL6J_1925912	Arhgef19	NCBI_Gene:213649,ENSEMBL:ENSMUSG00000028919	MGI:1925912	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 19
4	gene	141.2618	141.2660	negative	MGI_C57BL6J_3649999	Gm13055	ENSEMBL:ENSMUSG00000085774	MGI:3649999	lncRNA gene	predicted gene 13055
4	gene	141.2784	141.2798	positive	MGI_C57BL6J_3650725	Gm13056	NCBI_Gene:100503810,ENSEMBL:ENSMUSG00000085395	MGI:3650725	lncRNA gene	predicted gene 13056
4	gene	141.3012	141.3294	positive	MGI_C57BL6J_95278	Epha2	NCBI_Gene:13836,ENSEMBL:ENSMUSG00000006445	MGI:95278	protein coding gene	Eph receptor A2
4	gene	141.3462	141.3462	positive	MGI_C57BL6J_5455467	Gm25690	ENSEMBL:ENSMUSG00000093180	MGI:5455467	miRNA gene	predicted gene, 25690
4	gene	141.3478	141.3509	positive	MGI_C57BL6J_3651959	Gm13074	ENSEMBL:ENSMUSG00000085836	MGI:3651959	lncRNA gene	predicted gene 13074
4	pseudogene	141.3569	141.3571	negative	MGI_C57BL6J_3651957	Gm13076	NCBI_Gene:102637915,ENSEMBL:ENSMUSG00000084238	MGI:3651957	pseudogene	predicted gene 13076
4	gene	141.3682	141.3842	positive	MGI_C57BL6J_2685539	Fam131c	NCBI_Gene:277743,ENSEMBL:ENSMUSG00000006218	MGI:2685539	protein coding gene	family with sequence similarity 131, member C
4	gene	141.3846	141.3987	negative	MGI_C57BL6J_1329026	Clcnka	NCBI_Gene:12733,ENSEMBL:ENSMUSG00000033770	MGI:1329026	protein coding gene	chloride channel, voltage-sensitive Ka
4	gene	141.3988	141.4112	positive	MGI_C57BL6J_3651958	Gm13075	ENSEMBL:ENSMUSG00000086061	MGI:3651958	lncRNA gene	predicted gene 13075
4	gene	141.3998	141.4006	negative	MGI_C57BL6J_5593852	Gm34693	NCBI_Gene:102638025	MGI:5593852	lncRNA gene	predicted gene, 34693
4	gene	141.4044	141.4160	negative	MGI_C57BL6J_1930643	Clcnkb	NCBI_Gene:56365,ENSEMBL:ENSMUSG00000006216	MGI:1930643	protein coding gene	chloride channel, voltage-sensitive Kb
4	gene	141.4208	141.4253	positive	MGI_C57BL6J_1352494	Hspb7	NCBI_Gene:29818,ENSEMBL:ENSMUSG00000006221	MGI:1352494	protein coding gene	heat shock protein family, member 7 (cardiovascular)
4	gene	141.4327	141.4361	negative	MGI_C57BL6J_2685540	Srarp	NCBI_Gene:277744,ENSEMBL:ENSMUSG00000070637	MGI:2685540	protein coding gene	steroid receptor associated and regulated protein
4	gene	141.4440	141.4447	negative	MGI_C57BL6J_5625222	Gm42337	NCBI_Gene:105247198	MGI:5625222	lncRNA gene	predicted gene, 42337
4	gene	141.4447	141.4679	positive	MGI_C57BL6J_107410	Zbtb17	NCBI_Gene:22642,ENSEMBL:ENSMUSG00000006215	MGI:107410	protein coding gene	zinc finger and BTB domain containing 17
4	gene	141.4679	141.5386	negative	MGI_C57BL6J_1891706	Spen	NCBI_Gene:56381,ENSEMBL:ENSMUSG00000040761	MGI:1891706	protein coding gene	spen family transcription repressor
4	gene	141.5355	141.5374	positive	MGI_C57BL6J_3782299	Gm4123	NCBI_Gene:100042951	MGI:3782299	unclassified gene	predicted gene 4123
4	gene	141.5392	141.5436	positive	MGI_C57BL6J_2443748	B830004H01Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA B830004H01 gene
4	gene	141.5462	141.5483	positive	MGI_C57BL6J_2444063	B330016D10Rik	NCBI_Gene:320456,ENSEMBL:ENSMUSG00000048406	MGI:2444063	lncRNA gene	RIKEN cDNA B330016D10 gene
4	gene	141.5761	141.6061	negative	MGI_C57BL6J_1921452	Fblim1	NCBI_Gene:74202,ENSEMBL:ENSMUSG00000006219	MGI:1921452	protein coding gene	filamin binding LIM protein 1
4	gene	141.6134	141.6186	negative	MGI_C57BL6J_2384869	Tmem82	NCBI_Gene:213989,ENSEMBL:ENSMUSG00000043085	MGI:2384869	protein coding gene	transmembrane protein 82
4	gene	141.6140	141.6156	positive	MGI_C57BL6J_2140323	AI507597	NCBI_Gene:100165,ENSEMBL:ENSMUSG00000073731	MGI:2140323	lncRNA gene	expressed sequence AI507597
4	gene	141.6188	141.6240	negative	MGI_C57BL6J_2686215	Slc25a34	NCBI_Gene:384071,ENSEMBL:ENSMUSG00000040740	MGI:2686215	protein coding gene	solute carrier family 25, member 34
4	gene	141.6257	141.6649	negative	MGI_C57BL6J_1916832	Plekhm2	NCBI_Gene:69582,ENSEMBL:ENSMUSG00000028917	MGI:1916832	protein coding gene	pleckstrin homology domain containing, family M (with RUN domain) member 2
4	gene	141.6521	141.6549	positive	MGI_C57BL6J_1921207	4930451G21Rik	NA	NA	unclassified gene	RIKEN cDNA 4930451G21 gene
4	gene	141.6775	141.7234	negative	MGI_C57BL6J_1917244	Ddi2	NCBI_Gene:68817,ENSEMBL:ENSMUSG00000078515	MGI:1917244	protein coding gene	DNA-damage inducible protein 2
4	gene	141.6836	141.6857	negative	MGI_C57BL6J_3526447	Rsc1a1	NCBI_Gene:69994,ENSEMBL:ENSMUSG00000040715	MGI:3526447	protein coding gene	regulatory solute carrier protein, family 1, member 1
4	gene	141.7295	141.7438	positive	MGI_C57BL6J_5594022	Gm34863	NCBI_Gene:102638257	MGI:5594022	lncRNA gene	predicted gene, 34863
4	gene	141.7467	141.7593	positive	MGI_C57BL6J_1923236	Agmat	NCBI_Gene:75986,ENSEMBL:ENSMUSG00000040706	MGI:1923236	protein coding gene	agmatine ureohydrolase (agmatinase)
4	gene	141.7602	141.7909	negative	MGI_C57BL6J_2442146	Dnajc16	NCBI_Gene:214063,ENSEMBL:ENSMUSG00000040697	MGI:2442146	protein coding gene	DnaJ heat shock protein family (Hsp40) member C16
4	gene	141.7936	141.8160	positive	MGI_C57BL6J_1277950	Casp9	NCBI_Gene:12371,ENSEMBL:ENSMUSG00000028914	MGI:1277950	protein coding gene	caspase 9
4	gene	141.8150	141.8262	negative	MGI_C57BL6J_95316	Cela2a	NCBI_Gene:13706,ENSEMBL:ENSMUSG00000058579	MGI:95316	protein coding gene	chymotrypsin-like elastase family, member 2A
4	gene	141.8150	141.8464	negative	MGI_C57BL6J_1923951	Ctrc	NCBI_Gene:76701,ENSEMBL:ENSMUSG00000062478	MGI:1923951	protein coding gene	chymotrypsin C (caldecrin)
4	gene	141.8443	141.8470	positive	MGI_C57BL6J_1916389	Ctrcos	NCBI_Gene:69139,ENSEMBL:ENSMUSG00000086818	MGI:1916389	antisense lncRNA gene	chymotrypsin C (caldecrin), opposite strand
4	gene	141.8483	141.8585	positive	MGI_C57BL6J_5594193	Gm35034	NCBI_Gene:108168984	MGI:5594193	lncRNA gene	predicted gene, 35034
4	gene	141.8581	141.8749	negative	MGI_C57BL6J_106504	Efhd2	NCBI_Gene:27984,ENSEMBL:ENSMUSG00000040659	MGI:106504	protein coding gene	EF hand domain containing 2
4	gene	141.8757	141.8770	positive	MGI_C57BL6J_5580073	Gm29367	ENSEMBL:ENSMUSG00000100396	MGI:5580073	lncRNA gene	predicted gene 29367
4	gene	141.8797	141.8856	negative	MGI_C57BL6J_5826511	Gm46874	NCBI_Gene:108168983	MGI:5826511	lncRNA gene	predicted gene, 46874
4	gene	141.8813	141.9003	positive	MGI_C57BL6J_3651870	Fhad1os2	NCBI_Gene:102638933,ENSEMBL:ENSMUSG00000085922	MGI:3651870	antisense lncRNA gene	forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 2
4	gene	141.8904	142.0151	negative	MGI_C57BL6J_1920323	Fhad1	NCBI_Gene:329977,ENSEMBL:ENSMUSG00000051435	MGI:1920323	protein coding gene	forkhead-associated (FHA) phosphopeptide binding domain 1
4	gene	141.9099	141.9159	positive	MGI_C57BL6J_5625223	Gm42338	NCBI_Gene:105247199	MGI:5625223	lncRNA gene	predicted gene, 42338
4	gene	141.9209	141.9328	positive	MGI_C57BL6J_5594454	Gm35295	NCBI_Gene:102638820	MGI:5594454	lncRNA gene	predicted gene, 35295
4	pseudogene	141.9768	141.9773	positive	MGI_C57BL6J_3650255	Gm13059	ENSEMBL:ENSMUSG00000081079	MGI:3650255	pseudogene	predicted gene 13059
4	gene	141.9830	141.9868	positive	MGI_C57BL6J_3649995	Fhad1os1	NCBI_Gene:545691,ENSEMBL:ENSMUSG00000085424	MGI:3649995	antisense lncRNA gene	forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1
4	gene	142.0179	142.0290	positive	MGI_C57BL6J_1926167	4930455G09Rik	NCBI_Gene:78917,ENSEMBL:ENSMUSG00000085761	MGI:1926167	lncRNA gene	RIKEN cDNA 4930455G09 gene
4	gene	142.0310	142.0846	negative	MGI_C57BL6J_2384874	Tmem51	NCBI_Gene:214359,ENSEMBL:ENSMUSG00000040616	MGI:2384874	protein coding gene	transmembrane protein 51
4	gene	142.0429	142.0486	negative	MGI_C57BL6J_3651989	Gm13053	ENSEMBL:ENSMUSG00000085574	MGI:3651989	lncRNA gene	predicted gene 13053
4	gene	142.0840	142.0881	positive	MGI_C57BL6J_3642733	Tmem51os1	NCBI_Gene:100038693,ENSEMBL:ENSMUSG00000073728	MGI:3642733	antisense lncRNA gene	Tmem51 opposite strand 1
4	gene	142.1024	142.2394	negative	MGI_C57BL6J_1918779	Kazn	NCBI_Gene:71529,ENSEMBL:ENSMUSG00000040606	MGI:1918779	protein coding gene	kazrin, periplakin interacting protein
4	gene	142.1267	142.1282	positive	MGI_C57BL6J_5594740	Gm35581	NCBI_Gene:102639222	MGI:5594740	lncRNA gene	predicted gene, 35581
4	gene	142.1806	142.1841	positive	MGI_C57BL6J_3649476	Gm13062	ENSEMBL:ENSMUSG00000087525	MGI:3649476	lncRNA gene	predicted gene 13062
4	gene	142.2394	142.2426	positive	MGI_C57BL6J_5594690	Gm35531	NCBI_Gene:102639151	MGI:5594690	lncRNA gene	predicted gene, 35531
4	gene	142.2557	142.2561	negative	MGI_C57BL6J_1920742	1700085G17Rik	NA	NA	unclassified gene	RIKEN cDNA 1700085G17 gene
4	gene	142.3078	142.3465	negative	MGI_C57BL6J_3651990	Gm13052	ENSEMBL:ENSMUSG00000085816	MGI:3651990	lncRNA gene	predicted gene 13052
4	gene	142.3487	142.3610	positive	MGI_C57BL6J_5826512	Gm46875	NCBI_Gene:108168985	MGI:5826512	lncRNA gene	predicted gene, 46875
4	gene	142.4071	142.4143	negative	MGI_C57BL6J_5625224	Gm42339	NCBI_Gene:105247200	MGI:5625224	lncRNA gene	predicted gene, 42339
4	gene	142.4217	142.4230	negative	MGI_C57BL6J_3665284	C030029H13Rik	NA	NA	unclassified gene	Riken cDNA C030029H13 gene
4	gene	142.4956	142.4996	positive	MGI_C57BL6J_5594911	Gm35752	NCBI_Gene:102639438	MGI:5594911	lncRNA gene	predicted gene, 35752
4	gene	142.5984	143.0748	negative	MGI_C57BL6J_1917975	6330411D24Rik	ENSEMBL:ENSMUSG00000110067	MGI:1917975	lncRNA gene	RIKEN cDNA 6330411D24 gene
4	gene	142.6317	142.6354	positive	MGI_C57BL6J_5625227	Gm42342	NCBI_Gene:105247203	MGI:5625227	lncRNA gene	predicted gene, 42342
4	gene	142.6418	142.6631	positive	MGI_C57BL6J_5625225	Gm42340	NCBI_Gene:105247201	MGI:5625225	lncRNA gene	predicted gene, 42340
4	gene	142.6434	142.6476	negative	MGI_C57BL6J_5625226	Gm42341	NCBI_Gene:105247202	MGI:5625226	lncRNA gene	predicted gene, 42341
4	gene	142.7908	142.7910	positive	MGI_C57BL6J_5610852	Gm37624	ENSEMBL:ENSMUSG00000103678	MGI:5610852	unclassified gene	predicted gene, 37624
4	gene	143.1027	143.1063	negative	MGI_C57BL6J_1926077	5830426C09Rik	NA	NA	unclassified gene	RIKEN cDNA 5830426C09 gene
4	gene	143.1074	143.2130	negative	MGI_C57BL6J_107628	Prdm2	NCBI_Gene:110593,ENSEMBL:ENSMUSG00000057637	MGI:107628	protein coding gene	PR domain containing 2, with ZNF domain
4	gene	143.1361	143.1362	negative	MGI_C57BL6J_5562764	Mir7021	miRBase:MI0022870,NCBI_Gene:102465618,ENSEMBL:ENSMUSG00000106597	MGI:5562764	miRNA gene	microRNA 7021
4	pseudogene	143.1526	143.1530	positive	MGI_C57BL6J_3650684	Gm13038	ENSEMBL:ENSMUSG00000081838	MGI:3650684	pseudogene	predicted gene 13038
4	pseudogene	143.1666	143.1674	positive	MGI_C57BL6J_3649997	Gm13039	NCBI_Gene:100384872,ENSEMBL:ENSMUSG00000083826	MGI:3649997	pseudogene	predicted gene 13039
4	gene	143.2041	143.2042	positive	MGI_C57BL6J_5451816	Gm22039	ENSEMBL:ENSMUSG00000087903	MGI:5451816	snoRNA gene	predicted gene, 22039
4	gene	143.2120	143.2150	positive	MGI_C57BL6J_3646960	Gm6687	NA	NA	protein coding gene	predicted gene 6687
4	pseudogene	143.2420	143.2434	negative	MGI_C57BL6J_3650664	Eef2-ps2	NCBI_Gene:433776,ENSEMBL:ENSMUSG00000082575	MGI:3650664	pseudogene	eukaryotic translation elongation factor 2, pseudogene 2
4	gene	143.2674	143.2996	negative	MGI_C57BL6J_103098	Pdpn	NCBI_Gene:14726,ENSEMBL:ENSMUSG00000028583	MGI:103098	protein coding gene	podoplanin
4	gene	143.3404	143.3407	positive	MGI_C57BL6J_5456090	Gm26313	ENSEMBL:ENSMUSG00000088395	MGI:5456090	unclassified non-coding RNA gene	predicted gene, 26313
4	gene	143.3465	143.3710	positive	MGI_C57BL6J_2442845	Lrrc38	NCBI_Gene:242735,ENSEMBL:ENSMUSG00000028584	MGI:2442845	protein coding gene	leucine rich repeat containing 38
4	pseudogene	143.3895	143.3905	positive	MGI_C57BL6J_3651262	Anp32b-ps1	NCBI_Gene:621961,ENSEMBL:ENSMUSG00000081792	MGI:3651262	pseudogene	Bacidic (leucine-rich) nuclear phosphoprotein 32 family, member B, pseudogene 1
4	gene	143.3944	143.4002	positive	MGI_C57BL6J_1890541	Pramel1	NCBI_Gene:83491,ENSEMBL:ENSMUSG00000041805	MGI:1890541	protein coding gene	preferentially expressed antigen in melanoma-like 1
4	pseudogene	143.4023	143.4034	positive	MGI_C57BL6J_3649502	Gm13045	ENSEMBL:ENSMUSG00000082407	MGI:3649502	pseudogene	predicted gene 13045
4	gene	143.4123	143.4211	positive	MGI_C57BL6J_2140473	Pramef8	NCBI_Gene:242736,ENSEMBL:ENSMUSG00000046862	MGI:2140473	protein coding gene	PRAME family member 8
4	gene	143.4372	143.4503	negative	MGI_C57BL6J_2684051	Oog4	NCBI_Gene:242737,ENSEMBL:ENSMUSG00000047799	MGI:2684051	protein coding gene	oogenesin 4
4	pseudogene	143.4568	143.4606	negative	MGI_C57BL6J_3651155	Gm13042	NCBI_Gene:666015,ENSEMBL:ENSMUSG00000083930	MGI:3651155	pseudogene	predicted gene 13042
4	pseudogene	143.4643	143.4648	negative	MGI_C57BL6J_3649503	Gm13046	ENSEMBL:ENSMUSG00000084059	MGI:3649503	pseudogene	predicted gene 13046
4	pseudogene	143.4994	143.5025	positive	MGI_C57BL6J_3649499	Gm13041	NCBI_Gene:626700,ENSEMBL:ENSMUSG00000083403	MGI:3649499	pseudogene	predicted gene 13041
4	gene	143.5113	143.5178	positive	MGI_C57BL6J_3649500	Gm13043	NCBI_Gene:545693,ENSEMBL:ENSMUSG00000095409	MGI:3649500	protein coding gene	predicted gene 13043
4	gene	143.5360	143.5425	positive	MGI_C57BL6J_3649498	Gm13040	NCBI_Gene:100040854,ENSEMBL:ENSMUSG00000070616	MGI:3649498	protein coding gene	predicted gene 13040
4	gene	143.5517	143.5582	positive	MGI_C57BL6J_3649690	Gm13057	NCBI_Gene:100040861,ENSEMBL:ENSMUSG00000096154	MGI:3649690	protein coding gene	predicted gene 13057
4	gene	143.5517	143.5738	positive	MGI_C57BL6J_3525148	BC080695	NCBI_Gene:329986,ENSEMBL:ENSMUSG00000070618	MGI:3525148	protein coding gene	cDNA sequence BC080695
4	pseudogene	143.5950	143.6010	negative	MGI_C57BL6J_3650002	Gm13058	NCBI_Gene:666049,ENSEMBL:ENSMUSG00000081523	MGI:3650002	pseudogene	predicted gene 13058
4	pseudogene	143.6116	143.6122	negative	MGI_C57BL6J_3650235	Gm13080	NCBI_Gene:100044633,ENSEMBL:ENSMUSG00000044377	MGI:3650235	pseudogene	predicted gene 13080
4	gene	143.6150	143.6187	positive	MGI_C57BL6J_3650232	Gm13083	NCBI_Gene:279185,ENSEMBL:ENSMUSG00000066688	MGI:3650232	protein coding gene	predicted gene 13083
4	gene	143.6538	143.6606	negative	MGI_C57BL6J_3649971	Gm13088	NCBI_Gene:277668,ENSEMBL:ENSMUSG00000078513	MGI:3649971	protein coding gene	predicted gene 13088
4	pseudogene	143.6631	143.6638	negative	MGI_C57BL6J_3650236	Gm13085	ENSEMBL:ENSMUSG00000084351	MGI:3650236	pseudogene	predicted gene 13085
4	pseudogene	143.6711	143.6736	positive	MGI_C57BL6J_3650233	Gm13082	NCBI_Gene:100040924,ENSEMBL:ENSMUSG00000081227	MGI:3650233	pseudogene	predicted gene 13082
4	pseudogene	143.6819	143.6853	positive	MGI_C57BL6J_5826498	Gm46861	NCBI_Gene:108168961	MGI:5826498	pseudogene	predicted gene, 46861
4	gene	143.6965	143.7027	negative	MGI_C57BL6J_3649972	Gm13089	NCBI_Gene:277667,ENSEMBL:ENSMUSG00000070617	MGI:3649972	protein coding gene	predicted gene 13089
4	gene	143.7195	143.7292	positive	MGI_C57BL6J_3650231	Gm13078	NCBI_Gene:277666,ENSEMBL:ENSMUSG00000046435	MGI:3650231	protein coding gene	predicted gene 13078
4	pseudogene	143.7353	143.7356	negative	MGI_C57BL6J_3649970	Gm13087	ENSEMBL:ENSMUSG00000082717	MGI:3649970	pseudogene	predicted gene 13087
4	pseudogene	143.7458	143.7514	positive	MGI_C57BL6J_3650234	Gm13081	ENSEMBL:ENSMUSG00000082030	MGI:3650234	pseudogene	predicted gene 13081
4	gene	143.7893	143.7956	positive	MGI_C57BL6J_3650478	Gm13023	NCBI_Gene:194227,ENSEMBL:ENSMUSG00000066031	MGI:3650478	protein coding gene	predicted gene 13023
4	gene	143.8092	143.8161	negative	MGI_C57BL6J_3650237	Gm13084	NCBI_Gene:381569,ENSEMBL:ENSMUSG00000059218	MGI:3650237	protein coding gene	predicted gene 13084
4	gene	143.8465	143.8536	positive	MGI_C57BL6J_3650203	Gm13103	NCBI_Gene:194225,ENSEMBL:ENSMUSG00000029451	MGI:3650203	protein coding gene	predicted gene 13103
4	gene	143.8942	143.9004	negative	MGI_C57BL6J_3649940	Pramef6	NCBI_Gene:195555,ENSEMBL:ENSMUSG00000078512	MGI:3649940	protein coding gene	PRAME family member 6
4	pseudogene	143.9138	143.9167	positive	MGI_C57BL6J_3650205	Gm13100	NCBI_Gene:194224,ENSEMBL:ENSMUSG00000083749	MGI:3650205	pseudogene	predicted gene 13100
4	pseudogene	143.9285	143.9308	negative	MGI_C57BL6J_3651761	Gm13106	NCBI_Gene:108169006,ENSEMBL:ENSMUSG00000084123	MGI:3651761	pseudogene	predicted gene 13106
4	gene	143.9482	143.9510	negative	MGI_C57BL6J_3649968	Pramef25	NCBI_Gene:329984,ENSEMBL:ENSMUSG00000078511	MGI:3649968	protein coding gene	PRAME family member 25
4	gene	143.9641	143.9669	negative	MGI_C57BL6J_3650204	Gm13101	NCBI_Gene:626922,ENSEMBL:ENSMUSG00000078510	MGI:3650204	protein coding gene	predicted gene 13101
4	gene	143.9911	143.9944	negative	MGI_C57BL6J_3650199	Pramef17	NCBI_Gene:626943,ENSEMBL:ENSMUSG00000078509	MGI:3650199	protein coding gene	PRAME family member 17
4	pseudogene	144.0336	144.0356	positive	MGI_C57BL6J_3650198	Gm13108	NCBI_Gene:100534283,ENSEMBL:ENSMUSG00000083456	MGI:3650198	pseudogene	predicted gene 13108
4	pseudogene	144.0410	144.0425	negative	MGI_C57BL6J_3650202	Gm13104	NCBI_Gene:436146,ENSEMBL:ENSMUSG00000095987	MGI:3650202	pseudogene	predicted gene 13104
4	gene	144.0591	144.0693	positive	MGI_C57BL6J_2156377	Pramel4	NCBI_Gene:347710,ENSEMBL:ENSMUSG00000073724	MGI:2156377	protein coding gene	preferentially expressed antigen in melanoma like 4
4	gene	144.0874	144.0909	positive	MGI_C57BL6J_5625252	Gm42367	NCBI_Gene:108168962	MGI:5625252	protein coding gene	predicted gene, 42367
4	gene	144.0999	144.1101	positive	MGI_C57BL6J_3703005	Gm13102	NCBI_Gene:100041077,ENSEMBL:ENSMUSG00000073723	MGI:3703005	protein coding gene	predicted gene 13102
4	gene	144.1576	144.1627	negative	MGI_C57BL6J_2684047	Oog3	NCBI_Gene:100012,ENSEMBL:ENSMUSG00000050810	MGI:2684047	protein coding gene	oogenesin 3
4	gene	144.1907	144.1969	positive	MGI_C57BL6J_2684035	Oog2	NCBI_Gene:381570,ENSEMBL:ENSMUSG00000066030	MGI:2684035	protein coding gene	oogenesin 2
4	gene	144.2068	144.2133	negative	MGI_C57BL6J_2140708	C87977	NCBI_Gene:97187,ENSEMBL:ENSMUSG00000046262	MGI:2140708	protein coding gene	expressed sequence C87977
4	pseudogene	144.2478	144.2483	positive	MGI_C57BL6J_3651473	Gm13123	ENSEMBL:ENSMUSG00000083708	MGI:3651473	pseudogene	predicted gene 13123
4	pseudogene	144.2557	144.2576	negative	MGI_C57BL6J_5434367	Gm21012	NCBI_Gene:100534281	MGI:5434367	pseudogene	predicted gene, 21012
4	gene	144.2706	144.2805	negative	MGI_C57BL6J_2156389	Pramel5	NCBI_Gene:384077,ENSEMBL:ENSMUSG00000036749	MGI:2156389	protein coding gene	preferentially expressed antigen in melanoma like 5
4	pseudogene	144.2967	144.2981	positive	MGI_C57BL6J_3651691	Gm13120	NCBI_Gene:666150,ENSEMBL:ENSMUSG00000095960	MGI:3651691	pseudogene	predicted gene 13120
4	pseudogene	144.3030	144.3049	negative	MGI_C57BL6J_3651258	Gm13130	NCBI_Gene:100534282,ENSEMBL:ENSMUSG00000080943	MGI:3651258	pseudogene	predicted gene 13130
4	gene	144.3302	144.3335	positive	MGI_C57BL6J_3651261	Gm13128	NCBI_Gene:626995,ENSEMBL:ENSMUSG00000078508	MGI:3651261	protein coding gene	predicted gene 13128
4	pseudogene	144.3456	144.3460	negative	MGI_C57BL6J_3651474	Gm13122	ENSEMBL:ENSMUSG00000084312	MGI:3651474	pseudogene	predicted gene 13122
4	gene	144.3579	144.3644	positive	MGI_C57BL6J_3651680	Gm13119	NCBI_Gene:433779,ENSEMBL:ENSMUSG00000070619	MGI:3651680	protein coding gene	predicted gene 13119
4	gene	144.3728	144.3779	negative	MGI_C57BL6J_3712553	Pramef20	NCBI_Gene:627009,ENSEMBL:ENSMUSG00000073721	MGI:3712553	protein coding gene	PRAME family member 20
4	gene	144.3917	144.4085	negative	MGI_C57BL6J_1924882	Pramef12	NCBI_Gene:77632,ENSEMBL:ENSMUSG00000028591	MGI:1924882	protein coding gene	PRAME family member 12
4	gene	144.4049	144.4063	positive	MGI_C57BL6J_1925973	Pramef12os	ENSEMBL:ENSMUSG00000028590	MGI:1925973	antisense lncRNA gene	PRAME family member 12, opposite strand
4	gene	144.4182	144.4388	negative	MGI_C57BL6J_1916614	1700012P22Rik	NCBI_Gene:69364,ENSEMBL:ENSMUSG00000028589	MGI:1916614	protein coding gene	RIKEN cDNA 1700012P22 gene
4	gene	144.4512	144.4536	negative	MGI_C57BL6J_3642412	Gm9944	ENSEMBL:ENSMUSG00000095213	MGI:3642412	protein coding gene	predicted gene 9944
4	gene	144.4538	144.4638	negative	MGI_C57BL6J_2685281	Aadacl3	NCBI_Gene:230883,ENSEMBL:ENSMUSG00000078507	MGI:2685281	protein coding gene	arylacetamide deacetylase like 3
4	pseudogene	144.4984	144.4989	negative	MGI_C57BL6J_3651681	Gm13118	NCBI_Gene:100417902,ENSEMBL:ENSMUSG00000082835	MGI:3651681	pseudogene	predicted gene 13118
4	gene	144.5198	144.5294	positive	MGI_C57BL6J_2685880	Aadacl4fm1	NCBI_Gene:381572,ENSEMBL:ENSMUSG00000028593	MGI:2685880	protein coding gene	AADACL4 family member 1
4	pseudogene	144.5264	144.5270	negative	MGI_C57BL6J_3650486	Gm13121	NCBI_Gene:100041232,ENSEMBL:ENSMUSG00000083390	MGI:3650486	pseudogene	predicted gene 13121
4	pseudogene	144.5454	144.5486	negative	MGI_C57BL6J_3651475	Gm13126	NCBI_Gene:666194,ENSEMBL:ENSMUSG00000082418	MGI:3651475	pseudogene	predicted gene 13126
4	gene	144.5550	144.5651	negative	MGI_C57BL6J_3652194	Aadacl4fm2	NCBI_Gene:627085,ENSEMBL:ENSMUSG00000078506	MGI:3652194	protein coding gene	AADACL4 family member 2
4	pseudogene	144.5871	144.5890	positive	MGI_C57BL6J_3651260	Gm13127	NCBI_Gene:666215,ENSEMBL:ENSMUSG00000070610	MGI:3651260	pseudogene	predicted gene 13127
4	gene	144.6137	144.6234	positive	MGI_C57BL6J_3650257	Aadacl4	NCBI_Gene:435815,ENSEMBL:ENSMUSG00000070609	MGI:3650257	protein coding gene	arylacetamide deacetylase like 4
4	gene	144.6699	144.6864	negative	MGI_C57BL6J_2685282	Aadacl4fm4	NCBI_Gene:230890,ENSEMBL:ENSMUSG00000078505	MGI:2685282	protein coding gene	AADACL4 family member 4
4	gene	144.7032	144.7215	negative	MGI_C57BL6J_3650721	AAdacl4fm3	NCBI_Gene:546849,ENSEMBL:ENSMUSG00000041735	MGI:3650721	protein coding gene	AADACL4 family member 3
4	gene	144.7656	144.7658	negative	MGI_C57BL6J_5455715	Gm25938	ENSEMBL:ENSMUSG00000077327	MGI:5455715	snRNA gene	predicted gene, 25938
4	gene	144.7772	144.7866	negative	MGI_C57BL6J_2685284	Aadacl4fm5	NCBI_Gene:329993,ENSEMBL:ENSMUSG00000078504	MGI:2685284	protein coding gene	AADACL4 family member 5
4	pseudogene	144.7918	144.7928	positive	MGI_C57BL6J_1859808	Prdx2-ps2	NCBI_Gene:666242,ENSEMBL:ENSMUSG00000083998	MGI:1859808	pseudogene	peroxiredoxin 2, pseudogene 2
4	pseudogene	144.8113	144.8120	negative	MGI_C57BL6J_5826527	Gm46890	NCBI_Gene:108169007	MGI:5826527	pseudogene	predicted gene, 46890
4	gene	144.8554	144.8987	negative	MGI_C57BL6J_5826513	Gm46876	NCBI_Gene:108168986	MGI:5826513	lncRNA gene	predicted gene, 46876
4	gene	144.8926	144.9282	positive	MGI_C57BL6J_1315215	Dhrs3	NCBI_Gene:20148,ENSEMBL:ENSMUSG00000066026	MGI:1315215	protein coding gene	dehydrogenase/reductase (SDR family) member 3
4	gene	144.9047	145.1954	negative	MGI_C57BL6J_2448530	Vps13d	NCBI_Gene:230895,ENSEMBL:ENSMUSG00000020220	MGI:2448530	protein coding gene	vacuolar protein sorting 13D
4	gene	144.9386	144.9542	negative	MGI_C57BL6J_5625229	Gm42344	NCBI_Gene:105247205	MGI:5625229	lncRNA gene	predicted gene, 42344
4	gene	144.9572	144.9588	negative	MGI_C57BL6J_5611302	Gm38074	ENSEMBL:ENSMUSG00000103911	MGI:5611302	unclassified gene	predicted gene, 38074
4	gene	144.9634	144.9656	positive	MGI_C57BL6J_5595476	Gm36317	NCBI_Gene:102640189	MGI:5595476	lncRNA gene	predicted gene, 36317
4	gene	145.1450	145.1510	positive	MGI_C57BL6J_5625228	Gm42343	NCBI_Gene:105247204	MGI:5625228	lncRNA gene	predicted gene, 42343
4	gene	145.2124	145.2469	negative	MGI_C57BL6J_1314883	Tnfrsf1b	NCBI_Gene:21938,ENSEMBL:ENSMUSG00000028599	MGI:1314883	protein coding gene	tumor necrosis factor receptor superfamily, member 1b
4	gene	145.2486	145.2650	negative	MGI_C57BL6J_5595392	Gm36233	NCBI_Gene:102640078	MGI:5595392	lncRNA gene	predicted gene, 36233
4	gene	145.2671	145.3152	negative	MGI_C57BL6J_99908	Tnfrsf8	NCBI_Gene:21941,ENSEMBL:ENSMUSG00000028602	MGI:99908	protein coding gene	tumor necrosis factor receptor superfamily, member 8
4	pseudogene	145.3909	145.3917	positive	MGI_C57BL6J_3650678	Gm13024	NCBI_Gene:666282,ENSEMBL:ENSMUSG00000082758	MGI:3650678	pseudogene	predicted gene 13024
4	pseudogene	145.4043	145.4044	positive	MGI_C57BL6J_3652162	Gm13224	ENSEMBL:ENSMUSG00000084272	MGI:3652162	pseudogene	predicted gene 13224
4	gene	145.4102	145.4498	positive	MGI_C57BL6J_3651931	Platr16	ENSEMBL:ENSMUSG00000085101	MGI:3651931	lncRNA gene	pluripotency associated transcript 16
4	pseudogene	145.4334	145.4508	positive	MGI_C57BL6J_5625231	Gm42346	NCBI_Gene:105247207	MGI:5625231	pseudogene	predicted gene, 42346
4	pseudogene	145.4467	145.4509	positive	MGI_C57BL6J_3651934	Gm13230	ENSEMBL:ENSMUSG00000082082	MGI:3651934	pseudogene	predicted gene 13230
4	pseudogene	145.4556	145.4564	positive	MGI_C57BL6J_3652163	Gm13223	NCBI_Gene:100418367,ENSEMBL:ENSMUSG00000083081	MGI:3652163	pseudogene	predicted gene 13223
4	pseudogene	145.4642	145.4680	positive	MGI_C57BL6J_2443330	Smarca5-ps	NCBI_Gene:545700,ENSEMBL:ENSMUSG00000052912	MGI:2443330	pseudogene	SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene
4	pseudogene	145.4690	145.4716	negative	MGI_C57BL6J_3651933	Gm13229	NCBI_Gene:102634135,ENSEMBL:ENSMUSG00000087076	MGI:3651933	pseudogene	predicted gene 13229
4	gene	145.5108	145.5392	positive	MGI_C57BL6J_3652161	Zfp990	NCBI_Gene:101056073,ENSEMBL:ENSMUSG00000078503	MGI:3652161	protein coding gene	zinc finger protein 990
4	pseudogene	145.5605	145.5609	positive	MGI_C57BL6J_5439447	Gm21978	NCBI_Gene:100125275,ENSEMBL:ENSMUSG00000096864	MGI:5439447	pseudogene	predicted gene 21978
4	pseudogene	145.5745	145.5752	positive	MGI_C57BL6J_3651932	Gm13228	ENSEMBL:ENSMUSG00000082352	MGI:3651932	pseudogene	predicted gene 13228
4	pseudogene	145.5769	145.5773	negative	MGI_C57BL6J_3651282	Gm13226	NCBI_Gene:545701,ENSEMBL:ENSMUSG00000083454	MGI:3651282	pseudogene	predicted gene 13226
4	pseudogene	145.5790	145.5792	positive	MGI_C57BL6J_3652164	Gm13222	ENSEMBL:ENSMUSG00000080732	MGI:3652164	pseudogene	predicted gene 13222
4	gene	145.5852	145.6253	positive	MGI_C57BL6J_3651014	Gm13212	NCBI_Gene:433801,ENSEMBL:ENSMUSG00000078502	MGI:3651014	protein coding gene	predicted gene 13212
4	gene	145.6020	145.7124	negative	MGI_C57BL6J_5477257	Gm26763	NCBI_Gene:102633440,ENSEMBL:ENSMUSG00000097661	MGI:5477257	lncRNA gene	predicted gene, 26763
4	pseudogene	145.6325	145.6333	positive	MGI_C57BL6J_3649926	Gm13234	NCBI_Gene:666334,ENSEMBL:ENSMUSG00000083562	MGI:3649926	pseudogene	predicted gene 13234
4	pseudogene	145.6412	145.6445	positive	MGI_C57BL6J_3649243	Gm13231	NCBI_Gene:545703,ENSEMBL:ENSMUSG00000081885	MGI:3649243	pseudogene	predicted gene 13231
4	pseudogene	145.6467	145.6472	negative	MGI_C57BL6J_3649659	Gm13249	NCBI_Gene:384081,ENSEMBL:ENSMUSG00000095517	MGI:3649659	pseudogene	predicted gene 13249
4	gene	145.6707	145.7044	positive	MGI_C57BL6J_3712454	Zfp980	NCBI_Gene:100041379,ENSEMBL:ENSMUSG00000058186	MGI:3712454	protein coding gene	zinc finger protein 980
4	pseudogene	145.6898	145.6905	positive	MGI_C57BL6J_3650779	Gm13239	NCBI_Gene:666349,ENSEMBL:ENSMUSG00000082615	MGI:3650779	pseudogene	predicted gene 13239
4	pseudogene	145.7017	145.7760	positive	MGI_C57BL6J_3761370	Vmn2r-ps15	NCBI_Gene:100125279,ENSEMBL:ENSMUSG00000094177	MGI:3761370	pseudogene	vomeronasal 2, receptor, pseudogene 15
4	pseudogene	145.7294	145.7304	negative	MGI_C57BL6J_3649252	Gm13232	NCBI_Gene:666351,ENSEMBL:ENSMUSG00000084279	MGI:3649252	pseudogene	predicted gene 13232
4	pseudogene	145.7457	145.7474	positive	MGI_C57BL6J_3650036	Gm13244	NCBI_Gene:100534387,ENSEMBL:ENSMUSG00000082334	MGI:3650036	pseudogene	predicted gene 13244
4	gene	145.7629	145.7650	positive	MGI_C57BL6J_3705163	Gm13236	ENSEMBL:ENSMUSG00000087513	MGI:3705163	lncRNA gene	predicted gene 13236
4	pseudogene	145.7743	145.7753	positive	MGI_C57BL6J_3649654	Gm13243	NCBI_Gene:100417615,ENSEMBL:ENSMUSG00000094417	MGI:3649654	pseudogene	predicted gene 13243
4	pseudogene	145.7895	145.8320	positive	MGI_C57BL6J_1917255	Znf41-ps	NCBI_Gene:70005,ENSEMBL:ENSMUSG00000084350	MGI:1917255	pseudogene	ZNF41, pseudogene
4	pseudogene	145.8372	145.8380	positive	MGI_C57BL6J_3652104	Gm13238	NCBI_Gene:236069,ENSEMBL:ENSMUSG00000096233	MGI:3652104	pseudogene	predicted gene 13238
4	pseudogene	145.8435	145.8447	negative	MGI_C57BL6J_3649657	Gm13246	NCBI_Gene:102633201,ENSEMBL:ENSMUSG00000083235	MGI:3649657	pseudogene	predicted gene 13246
4	gene	145.8688	145.9000	positive	MGI_C57BL6J_3649925	Zfp986	ENSEMBL:ENSMUSG00000078500	MGI:3649925	protein coding gene	zinc finger protein 986
4	pseudogene	146.0588	146.0595	positive	MGI_C57BL6J_3650250	Gm13036	NCBI_Gene:100418368,ENSEMBL:ENSMUSG00000081595	MGI:3650250	pseudogene	predicted gene 13036
4	pseudogene	146.0675	146.0709	positive	MGI_C57BL6J_3650252	Gm13034	NCBI_Gene:627585,ENSEMBL:ENSMUSG00000082195	MGI:3650252	pseudogene	predicted gene 13034
4	pseudogene	146.0732	146.0737	negative	MGI_C57BL6J_3650251	Gm13035	NCBI_Gene:102637947,ENSEMBL:ENSMUSG00000083733	MGI:3650251	pseudogene	predicted gene 13035
4	gene	146.0973	146.1266	positive	MGI_C57BL6J_3702694	Zfp987	NCBI_Gene:626316,ENSEMBL:ENSMUSG00000066009	MGI:3702694	protein coding gene	zinc finger protein 987
4	pseudogene	146.1247	146.2649	positive	MGI_C57BL6J_3761372	Vmn2r-ps17	NCBI_Gene:434514,ENSEMBL:ENSMUSG00000095096	MGI:3761372	pseudogene	vomeronasal 2, receptor, pseudogene 17
4	gene	146.1535	147.0250	negative	MGI_C57BL6J_5477067	Gm26573	ENSEMBL:ENSMUSG00000096958	MGI:5477067	lncRNA gene	predicted gene, 26573
4	gene	146.1568	146.1988	positive	MGI_C57BL6J_3705222	Zfp600	NCBI_Gene:667666,ENSEMBL:ENSMUSG00000066007	MGI:3705222	protein coding gene	zinc finger protein 600
4	gene	146.1675	146.2643	negative	MGI_C57BL6J_3650210	Gm13165	NCBI_Gene:105247209,ENSEMBL:ENSMUSG00000086654	MGI:3650210	lncRNA gene	predicted gene 13165
4	pseudogene	146.1781	146.1788	positive	MGI_C57BL6J_3651095	Gm13170	NCBI_Gene:626480,ENSEMBL:ENSMUSG00000081522	MGI:3651095	pseudogene	predicted gene 13170
4	pseudogene	146.2239	146.2248	negative	MGI_C57BL6J_3650208	Gm13167	NCBI_Gene:666474,ENSEMBL:ENSMUSG00000081671	MGI:3650208	pseudogene	predicted gene 13167
4	pseudogene	146.2400	146.2416	positive	MGI_C57BL6J_3651793	Gm13169	NCBI_Gene:100534388,ENSEMBL:ENSMUSG00000084127	MGI:3651793	pseudogene	predicted gene 13169
4	gene	146.2518	146.2784	positive	MGI_C57BL6J_3705130	Gm13166	ENSEMBL:ENSMUSG00000085525	MGI:3705130	lncRNA gene	predicted gene 13166
4	pseudogene	146.2636	146.2642	positive	MGI_C57BL6J_3650212	Gm13168	ENSEMBL:ENSMUSG00000081460	MGI:3650212	pseudogene	predicted gene 13168
4	pseudogene	146.4451	146.6055	positive	MGI_C57BL6J_3761371	Vmn2r-ps16	NCBI_Gene:100125280,ENSEMBL:ENSMUSG00000095460	MGI:3761371	pseudogene	vomeronasal 2, receptor, pseudogene 16
4	gene	146.4490	146.4703	positive	MGI_C57BL6J_3700963	Zfp992	NCBI_Gene:433791,ENSEMBL:ENSMUSG00000070605	MGI:3700963	protein coding gene	zinc finger protein 992
4	pseudogene	146.4748	146.4782	positive	MGI_C57BL6J_3649920	Gm13241	NCBI_Gene:433790,ENSEMBL:ENSMUSG00000073716	MGI:3649920	pseudogene	predicted gene 13241
4	pseudogene	146.4807	146.4809	positive	MGI_C57BL6J_3649656	Gm13245	ENSEMBL:ENSMUSG00000081998	MGI:3649656	pseudogene	predicted gene 13245
4	gene	146.5020	146.5394	positive	MGI_C57BL6J_3700965	Zfp981	NCBI_Gene:100041433,ENSEMBL:ENSMUSG00000056300	MGI:3700965	protein coding gene	zinc finger protein 981
4	gene	146.5091	146.5118	negative	MGI_C57BL6J_5477374	Gm26880	ENSEMBL:ENSMUSG00000096979	MGI:5477374	lncRNA gene	predicted gene, 26880
4	gene	146.5190	146.5469	negative	MGI_C57BL6J_1914774	1700095A21Rik	NCBI_Gene:67524,ENSEMBL:ENSMUSG00000086046	MGI:1914774	lncRNA gene	RIKEN cDNA 1700095A21 gene
4	pseudogene	146.5642	146.5652	negative	MGI_C57BL6J_3649924	Gm13237	NCBI_Gene:666390,ENSEMBL:ENSMUSG00000095865	MGI:3649924	pseudogene	predicted gene 13237
4	pseudogene	146.5800	146.5833	positive	MGI_C57BL6J_3649253	Gm13233	NCBI_Gene:100534386,ENSEMBL:ENSMUSG00000083038	MGI:3649253	pseudogene	predicted gene 13233
4	pseudogene	146.6038	146.6048	positive	MGI_C57BL6J_3650771	Gm13240	NCBI_Gene:100417614,ENSEMBL:ENSMUSG00000096366	MGI:3650771	pseudogene	predicted gene 13240
4	gene	146.6109	146.6584	positive	MGI_C57BL6J_3713585	Zfp993	NCBI_Gene:100503000,ENSEMBL:ENSMUSG00000063245	MGI:3713585	protein coding gene	zinc finger protein 993
4	gene	146.7278	146.7298	negative	MGI_C57BL6J_5589840	Gm30681	NCBI_Gene:102632663	MGI:5589840	lncRNA gene	predicted gene, 30681
4	pseudogene	146.7496	146.7505	negative	MGI_C57BL6J_5434231	Gm20875	NCBI_Gene:100041490	MGI:5434231	pseudogene	predicted gene, 20875
4	pseudogene	146.8166	146.8217	negative	MGI_C57BL6J_5826533	Gm46896	NCBI_Gene:108169015	MGI:5826533	pseudogene	predicted gene, 46896
4	pseudogene	146.8289	146.8382	negative	MGI_C57BL6J_5434437	Gm21082	NCBI_Gene:100861620	MGI:5434437	pseudogene	predicted gene, 21082
4	gene	146.8917	146.9096	negative	MGI_C57BL6J_5434766	Gm21411	ENSEMBL:ENSMUSG00000045699	MGI:5434766	lncRNA gene	predicted gene, 21411
4	pseudogene	146.9324	146.9336	positive	MGI_C57BL6J_5434116	Gm20760	NCBI_Gene:631415,ENSEMBL:ENSMUSG00000093919	MGI:5434116	pseudogene	predicted gene, 20760
4	pseudogene	146.9423	146.9460	positive	MGI_C57BL6J_3649297	Gm13140	NCBI_Gene:626288,ENSEMBL:ENSMUSG00000083027	MGI:3649297	pseudogene	predicted gene 13140
4	pseudogene	146.9481	146.9485	negative	MGI_C57BL6J_3651738	Gm13149	NCBI_Gene:102631940,ENSEMBL:ENSMUSG00000081260	MGI:3651738	pseudogene	predicted gene 13149
4	gene	146.9720	146.9908	positive	MGI_C57BL6J_3651739	Zfp989	ENSEMBL:ENSMUSG00000086147	MGI:3651739	protein coding gene	zinc finger protein 989
4	pseudogene	146.9977	147.0028	positive	MGI_C57BL6J_5826532	Gm46895	NCBI_Gene:108169014	MGI:5826532	pseudogene	predicted gene, 46895
4	gene	147.0182	147.4922	negative	MGI_C57BL6J_2444536	C230088H06Rik	ENSEMBL:ENSMUSG00000097168	MGI:2444536	lncRNA gene	RIKEN cDNA C230088H06 gene
4	gene	147.0219	147.0608	positive	MGI_C57BL6J_1328322	Rex2	NCBI_Gene:100043034,ENSEMBL:ENSMUSG00000067919	MGI:1328322	protein coding gene	reduced expression 2
4	pseudogene	147.0406	147.0414	positive	MGI_C57BL6J_3651987	Gm13153	NCBI_Gene:100417333,ENSEMBL:ENSMUSG00000083704	MGI:3651987	pseudogene	predicted gene 13153
4	gene	147.0634	147.0684	negative	MGI_C57BL6J_1918520	4933438K21Rik	NCBI_Gene:71270,ENSEMBL:ENSMUSG00000093617	MGI:1918520	lncRNA gene	RIKEN cDNA 4933438K21 gene
4	pseudogene	147.0862	147.0870	negative	MGI_C57BL6J_3649984	Gm13160	NCBI_Gene:666514,ENSEMBL:ENSMUSG00000094017	MGI:3649984	pseudogene	predicted gene 13160
4	pseudogene	147.1023	147.1040	positive	MGI_C57BL6J_3651745	Gm13142	NCBI_Gene:100041561,ENSEMBL:ENSMUSG00000081405	MGI:3651745	pseudogene	predicted gene 13142
4	pseudogene	147.1253	147.1258	positive	MGI_C57BL6J_3701119	Gm13162	ENSEMBL:ENSMUSG00000082779	MGI:3701119	pseudogene	predicted pseudogene 13162
4	gene	147.1253	147.3926	positive	MGI_C57BL6J_3701123	Zfp978	NCBI_Gene:108168963,ENSEMBL:ENSMUSG00000078497	MGI:3701123	protein coding gene	zinc finger protein 978
4	pseudogene	147.1261	147.1265	positive	MGI_C57BL6J_3761373	Vmn2r-ps18	NCBI_Gene:100124576,ENSEMBL:ENSMUSG00000094849	MGI:3761373	pseudogene	vomeronasal 2, receptor, pseudogene 18
4	gene	147.1320	147.1806	positive	MGI_C57BL6J_3701604	Zfp991	NCBI_Gene:666532,ENSEMBL:ENSMUSG00000067916	MGI:3701604	protein coding gene	zinc finger protein 991
4	gene	147.1363	147.4570	positive	MGI_C57BL6J_5477118	Gm26624	ENSEMBL:ENSMUSG00000097122	MGI:5477118	lncRNA gene	predicted gene, 26624
4	pseudogene	147.1877	147.1885	positive	MGI_C57BL6J_3651742	Gm13146	NCBI_Gene:384087,ENSEMBL:ENSMUSG00000095054	MGI:3651742	pseudogene	predicted gene 13146
4	pseudogene	147.1941	147.1952	negative	MGI_C57BL6J_3651199	Gm13163	NCBI_Gene:102631726,ENSEMBL:ENSMUSG00000082176	MGI:3651199	pseudogene	predicted gene 13163
4	gene	147.2219	147.2263	positive	MGI_C57BL6J_5625253	Gm42368	NCBI_Gene:105247234	MGI:5625253	protein coding gene	predicted gene, 42368
4	pseudogene	147.2303	147.2593	positive	MGI_C57BL6J_3651740	Gm13147	ENSEMBL:ENSMUSG00000087207	MGI:3651740	pseudogene	predicted gene 13147
4	pseudogene	147.2674	147.2684	positive	MGI_C57BL6J_3649982	Gm13158	NCBI_Gene:102640977,ENSEMBL:ENSMUSG00000081627	MGI:3649982	pseudogene	predicted gene 13158
4	pseudogene	147.2756	147.2793	positive	MGI_C57BL6J_3650404	Gm13135	NCBI_Gene:545716,ENSEMBL:ENSMUSG00000082925	MGI:3650404	pseudogene	predicted gene 13135
4	pseudogene	147.2814	147.2819	negative	MGI_C57BL6J_3651743	Gm13144	NCBI_Gene:666574,ENSEMBL:ENSMUSG00000094318	MGI:3651743	pseudogene	predicted gene 13144
4	gene	147.3057	147.3337	positive	MGI_C57BL6J_3651985	Zfp988	ENSEMBL:ENSMUSG00000078498	MGI:3651985	protein coding gene	zinc finger protein 988
4	pseudogene	147.3789	147.3798	positive	MGI_C57BL6J_3646475	Gm8178	NCBI_Gene:666588,ENSEMBL:ENSMUSG00000096354	MGI:3646475	pseudogene	predicted gene 8178
4	gene	147.3972	147.3997	negative	MGI_C57BL6J_1925446	4930546J17Rik	NA	NA	unclassified gene	RIKEN cDNA 4930546J17 gene
4	gene	147.3998	147.4076	positive	MGI_C57BL6J_5826534	Gm46897	NCBI_Gene:108169016	MGI:5826534	lncRNA gene	predicted gene, 46897
4	gene	147.4117	147.4135	positive	MGI_C57BL6J_5826535	Gm46898	NCBI_Gene:108169017	MGI:5826535	lncRNA gene	predicted gene, 46898
4	pseudogene	147.4430	147.4440	positive	MGI_C57BL6J_3650656	Gm13161	NCBI_Gene:100861575,ENSEMBL:ENSMUSG00000082248	MGI:3650656	pseudogene	predicted gene 13161
4	pseudogene	147.4443	147.4446	positive	MGI_C57BL6J_3761374	Vmn2r-ps19	NCBI_Gene:100125283,ENSEMBL:ENSMUSG00000093975	MGI:3761374	pseudogene	vomeronasal 2, receptor, pseudogene 19
4	gene	147.4924	147.5135	positive	MGI_C57BL6J_3701121	Zfp982	NCBI_Gene:195531,ENSEMBL:ENSMUSG00000078496	MGI:3701121	protein coding gene	zinc finger protein 982
4	pseudogene	147.5205	147.5209	negative	MGI_C57BL6J_3801908	Gm15951	ENSEMBL:ENSMUSG00000081301	MGI:3801908	pseudogene	predicted gene 15951
4	pseudogene	147.5215	147.5219	positive	MGI_C57BL6J_3761375	Vmn2r-ps20	NCBI_Gene:100125298,ENSEMBL:ENSMUSG00000096440	MGI:3761375	pseudogene	vomeronasal 2, receptor, pseudogene 20
4	pseudogene	147.5277	147.5282	negative	MGI_C57BL6J_3651744	Gm13141	ENSEMBL:ENSMUSG00000082599	MGI:3651744	pseudogene	predicted gene 13141
4	gene	147.5402	147.5435	positive	MGI_C57BL6J_3642127	Gm16503	NA	NA	protein coding gene	predicted gene 16503
4	gene	147.5533	147.5852	positive	MGI_C57BL6J_3651986	Zfp985	NCBI_Gene:433804,ENSEMBL:ENSMUSG00000065999	MGI:3651986	protein coding gene	zinc finger protein 985
4	gene	147.6119	147.6425	negative	MGI_C57BL6J_2148252	Zfp979	NCBI_Gene:112422,ENSEMBL:ENSMUSG00000066000	MGI:2148252	protein coding gene	zinc finger protein 979
4	pseudogene	147.6240	147.6249	negative	MGI_C57BL6J_3651982	Gm13155	NCBI_Gene:666618,ENSEMBL:ENSMUSG00000096065	MGI:3651982	pseudogene	predicted gene 13155
4	gene	147.6685	147.6709	negative	MGI_C57BL6J_3802078	Gm16211	ENSEMBL:ENSMUSG00000086130	MGI:3802078	lncRNA gene	predicted gene 16211
4	gene	147.6735	147.7026	negative	MGI_C57BL6J_3650650	Zfp534	NCBI_Gene:100503584,ENSEMBL:ENSMUSG00000062518	MGI:3650650	protein coding gene	zinc finger protein 534
4	pseudogene	147.7328	147.7331	positive	MGI_C57BL6J_3649289	Gm13137	NCBI_Gene:666640,ENSEMBL:ENSMUSG00000096521	MGI:3649289	pseudogene	predicted gene 13137
4	pseudogene	147.7353	147.7390	negative	MGI_C57BL6J_3649290	Gm13136	NCBI_Gene:194189,ENSEMBL:ENSMUSG00000081179	MGI:3649290	pseudogene	predicted gene 13136
4	pseudogene	147.7455	147.7466	negative	MGI_C57BL6J_3651741	Gm13148	NCBI_Gene:666652,ENSEMBL:ENSMUSG00000083642	MGI:3651741	pseudogene	predicted gene 13148
4	gene	147.7540	147.8098	negative	MGI_C57BL6J_3651978	Zfp984	NCBI_Gene:100041677,ENSEMBL:ENSMUSG00000078495	MGI:3651978	protein coding gene	zinc finger protein 984
4	gene	147.7823	147.8098	negative	MGI_C57BL6J_5313154	Gm20707	ENSEMBL:ENSMUSG00000093594	MGI:5313154	lncRNA gene	predicted gene 20707
4	pseudogene	147.8218	147.8222	negative	MGI_C57BL6J_3701125	Rps19-ps3	NCBI_Gene:277692,ENSEMBL:ENSMUSG00000080059	MGI:3701125	pseudogene	ribosomal protein S19, pseudogene 3
4	gene	147.8230	147.8485	negative	MGI_C57BL6J_1922865	Zfp933	NCBI_Gene:242747,ENSEMBL:ENSMUSG00000059423	MGI:1922865	protein coding gene	zinc finger protein 933
4	gene	147.8608	147.8688	negative	MGI_C57BL6J_106506	Miip	NCBI_Gene:28010,ENSEMBL:ENSMUSG00000029022	MGI:106506	protein coding gene	migration and invasion inhibitory protein
4	gene	147.8690	147.8704	positive	MGI_C57BL6J_95595	Fv1	NCBI_Gene:14349,ENSEMBL:ENSMUSG00000070583	MGI:95595	protein coding gene	Friend virus susceptibility 1
4	gene	147.8736	147.9049	negative	MGI_C57BL6J_2442230	Mfn2	NCBI_Gene:170731,ENSEMBL:ENSMUSG00000029020	MGI:2442230	protein coding gene	mitofusin 2
4	pseudogene	147.8937	147.8940	positive	MGI_C57BL6J_3651983	Gm13156	ENSEMBL:ENSMUSG00000083340	MGI:3651983	pseudogene	predicted gene 13156
4	gene	147.9098	147.9368	negative	MGI_C57BL6J_99907	Plod1	NCBI_Gene:18822,ENSEMBL:ENSMUSG00000019055	MGI:99907	protein coding gene	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
4	gene	147.9409	147.9473	positive	MGI_C57BL6J_1924284	2510039O18Rik	NCBI_Gene:77034,ENSEMBL:ENSMUSG00000044496	MGI:1924284	protein coding gene	RIKEN cDNA 2510039O18 gene
4	gene	147.9858	147.9872	positive	MGI_C57BL6J_97368	Nppb	NCBI_Gene:18158,ENSEMBL:ENSMUSG00000029019	MGI:97368	protein coding gene	natriuretic peptide type B
4	gene	148.0007	148.0021	positive	MGI_C57BL6J_97367	Nppa	NCBI_Gene:230899,ENSEMBL:ENSMUSG00000041616	MGI:97367	protein coding gene	natriuretic peptide type A
4	gene	148.0011	148.0040	negative	MGI_C57BL6J_3702728	Gm13054	ENSEMBL:ENSMUSG00000086806	MGI:3702728	lncRNA gene	predicted gene 13054
4	gene	148.0043	148.0389	negative	MGI_C57BL6J_1347049	Clcn6	NCBI_Gene:26372,ENSEMBL:ENSMUSG00000029016	MGI:1347049	protein coding gene	chloride channel, voltage-sensitive 6
4	pseudogene	148.0316	148.0323	positive	MGI_C57BL6J_3651232	Gm13207	NCBI_Gene:100418092,ENSEMBL:ENSMUSG00000083473	MGI:3651232	pseudogene	predicted gene 13207
4	gene	148.0383	148.0596	positive	MGI_C57BL6J_106639	Mthfr	NCBI_Gene:17769,ENSEMBL:ENSMUSG00000029009	MGI:106639	protein coding gene	methylenetetrahydrofolate reductase
4	gene	148.0580	148.0765	negative	MGI_C57BL6J_3649941	Gm13201	NCBI_Gene:102634746,ENSEMBL:ENSMUSG00000078494	MGI:3649941	lncRNA gene	predicted gene 13201
4	pseudogene	148.0680	148.0686	negative	MGI_C57BL6J_3649942	Chchd2-ps	NCBI_Gene:433806,ENSEMBL:ENSMUSG00000094320	MGI:3649942	pseudogene	coiled-coil-helix-coiled-coil-helix domain containing 2, pseudogene
4	gene	148.0771	148.0881	negative	MGI_C57BL6J_1339977	Agtrap	NCBI_Gene:11610,ENSEMBL:ENSMUSG00000029007	MGI:1339977	protein coding gene	angiotensin II, type I receptor-associated protein
4	gene	148.0984	148.1311	negative	MGI_C57BL6J_1917683	Draxin	NCBI_Gene:70433,ENSEMBL:ENSMUSG00000029005	MGI:1917683	protein coding gene	dorsal inhibitory axon guidance protein
4	gene	148.1303	148.1457	positive	MGI_C57BL6J_1919140	Mad2l2	NCBI_Gene:71890,ENSEMBL:ENSMUSG00000029003	MGI:1919140	protein coding gene	MAD2 mitotic arrest deficient-like 2
4	gene	148.1457	148.1521	negative	MGI_C57BL6J_1354743	Fbxo6	NCBI_Gene:50762,ENSEMBL:ENSMUSG00000055401	MGI:1354743	protein coding gene	F-box protein 6
4	gene	148.1469	148.1470	negative	MGI_C57BL6J_5530673	Mir7022	miRBase:MI0022871,NCBI_Gene:102465619,ENSEMBL:ENSMUSG00000099043	MGI:5530673	miRNA gene	microRNA 7022
4	gene	148.1528	148.1605	negative	MGI_C57BL6J_1354744	Fbxo44	NCBI_Gene:230903,ENSEMBL:ENSMUSG00000029001	MGI:1354744	protein coding gene	F-box protein 44
4	gene	148.1602	148.1664	positive	MGI_C57BL6J_2446216	Fbxo2	NCBI_Gene:230904,ENSEMBL:ENSMUSG00000041556	MGI:2446216	protein coding gene	F-box protein 2
4	gene	148.2081	148.2148	negative	MGI_C57BL6J_5591762	Gm32603	NCBI_Gene:102635206	MGI:5591762	lncRNA gene	predicted gene, 32603
4	gene	148.2364	148.2880	negative	MGI_C57BL6J_2444403	Disp3	NCBI_Gene:242748,ENSEMBL:ENSMUSG00000041544	MGI:2444403	protein coding gene	dispatched RND transporter family member 3
4	gene	148.3069	148.3166	positive	MGI_C57BL6J_3651440	Gm13206	ENSEMBL:ENSMUSG00000087027	MGI:3651440	lncRNA gene	predicted gene 13206
4	gene	148.3564	148.3595	negative	MGI_C57BL6J_3650195	Gm13200	ENSEMBL:ENSMUSG00000086326	MGI:3650195	lncRNA gene	predicted gene 13200
4	gene	148.4345	148.4448	negative	MGI_C57BL6J_1918957	Ubiad1	NCBI_Gene:71707,ENSEMBL:ENSMUSG00000047719	MGI:1918957	protein coding gene	UbiA prenyltransferase domain containing 1
4	gene	148.4433	148.4435	negative	MGI_C57BL6J_5453080	Gm23303	ENSEMBL:ENSMUSG00000064648	MGI:5453080	snRNA gene	predicted gene, 23303
4	gene	148.4486	148.5577	positive	MGI_C57BL6J_1928394	Mtor	NCBI_Gene:56717,ENSEMBL:ENSMUSG00000028991	MGI:1928394	protein coding gene	mechanistic target of rapamycin kinase
4	gene	148.4952	148.5005	negative	MGI_C57BL6J_3605801	Angptl7	NCBI_Gene:654812,ENSEMBL:ENSMUSG00000028989	MGI:3605801	protein coding gene	angiopoietin-like 7
4	gene	148.5391	148.5392	positive	MGI_C57BL6J_5453779	Gm24002	ENSEMBL:ENSMUSG00000089081	MGI:5453779	snRNA gene	predicted gene, 24002
4	gene	148.5557	148.5558	positive	MGI_C57BL6J_5453095	Gm23318	ENSEMBL:ENSMUSG00000088625	MGI:5453095	snRNA gene	predicted gene, 23318
4	gene	148.5584	148.5824	positive	MGI_C57BL6J_1355322	Exosc10	NCBI_Gene:50912,ENSEMBL:ENSMUSG00000017264	MGI:1355322	protein coding gene	exosome component 10
4	pseudogene	148.5691	148.5699	negative	MGI_C57BL6J_3651444	Gm13204	ENSEMBL:ENSMUSG00000082860	MGI:3651444	pseudogene	predicted gene 13204
4	gene	148.5847	148.5860	negative	MGI_C57BL6J_3651228	Gm13209	ENSEMBL:ENSMUSG00000087217	MGI:3651228	lncRNA gene	predicted gene 13209
4	gene	148.5915	148.5950	positive	MGI_C57BL6J_102690	Srm	NCBI_Gene:20810,ENSEMBL:ENSMUSG00000006442	MGI:102690	protein coding gene	spermidine synthase
4	gene	148.5949	148.6155	positive	MGI_C57BL6J_1330832	Masp2	NCBI_Gene:17175,ENSEMBL:ENSMUSG00000028979	MGI:1330832	protein coding gene	mannan-binding lectin serine peptidase 2
4	gene	148.6124	148.6270	negative	MGI_C57BL6J_2387629	Tardbp	NCBI_Gene:230908,ENSEMBL:ENSMUSG00000041459	MGI:2387629	protein coding gene	TAR DNA binding protein
4	gene	148.6433	148.6770	positive	MGI_C57BL6J_2685418	Gm572	NCBI_Gene:230909,ENSEMBL:ENSMUSG00000070577	MGI:2685418	protein coding gene	predicted gene 572
4	gene	148.7137	148.7166	positive	MGI_C57BL6J_3651445	Gm13203	ENSEMBL:ENSMUSG00000087273	MGI:3651445	lncRNA gene	predicted gene 13203
4	gene	148.7449	148.7474	negative	MGI_C57BL6J_5592056	Gm32897	NCBI_Gene:102635606	MGI:5592056	lncRNA gene	predicted gene, 32897
4	gene	148.7798	148.7849	negative	MGI_C57BL6J_5625235	Gm42350	NCBI_Gene:105247212	MGI:5625235	lncRNA gene	predicted gene, 42350
4	gene	148.8044	148.9549	positive	MGI_C57BL6J_1196251	Casz1	NCBI_Gene:69743,ENSEMBL:ENSMUSG00000028977	MGI:1196251	protein coding gene	castor zinc finger 1
4	gene	148.8651	148.8675	negative	MGI_C57BL6J_5625237	Gm42352	NCBI_Gene:105247214	MGI:5625237	lncRNA gene	predicted gene, 42352
4	gene	148.9135	148.9143	negative	MGI_C57BL6J_3801757	Gm15969	ENSEMBL:ENSMUSG00000086766	MGI:3801757	lncRNA gene	predicted gene 15969
4	gene	148.9475	148.9497	negative	MGI_C57BL6J_3700976	Gm13205	NCBI_Gene:108168987,ENSEMBL:ENSMUSG00000086606	MGI:3700976	lncRNA gene	predicted gene 13205
4	gene	148.9575	148.9919	positive	MGI_C57BL6J_4937856	Gm17029	NCBI_Gene:102635786,ENSEMBL:ENSMUSG00000086740	MGI:4937856	lncRNA gene	predicted gene 17029
4	gene	148.9605	149.0999	negative	MGI_C57BL6J_1927868	Pex14	NCBI_Gene:56273,ENSEMBL:ENSMUSG00000028975	MGI:1927868	protein coding gene	peroxisomal biogenesis factor 14
4	gene	148.9970	149.0030	negative	MGI_C57BL6J_5625236	Gm42351	NCBI_Gene:105247213	MGI:5625236	lncRNA gene	predicted gene, 42351
4	pseudogene	149.0963	149.0969	positive	MGI_C57BL6J_3779916	Gm9506	NCBI_Gene:670864,ENSEMBL:ENSMUSG00000081086	MGI:3779916	pseudogene	predicted gene 9506
4	gene	149.0989	149.0998	positive	MGI_C57BL6J_5826359	Gm46722	NCBI_Gene:108168707	MGI:5826359	lncRNA gene	predicted gene, 46722
4	gene	149.1041	149.1207	positive	MGI_C57BL6J_1196227	Dffa	NCBI_Gene:13347,ENSEMBL:ENSMUSG00000028974	MGI:1196227	protein coding gene	DNA fragmentation factor, alpha subunit
4	gene	149.1250	149.1268	negative	MGI_C57BL6J_109538	Cort	NCBI_Gene:12854,ENSEMBL:ENSMUSG00000028971	MGI:109538	protein coding gene	cortistatin
4	gene	149.1271	149.1376	negative	MGI_C57BL6J_1917178	Cenps	NCBI_Gene:69928,ENSEMBL:ENSMUSG00000073705	MGI:1917178	protein coding gene	centromere protein S
4	pseudogene	149.1424	149.1435	negative	MGI_C57BL6J_3651234	Rpsa-ps12	NCBI_Gene:666774,ENSEMBL:ENSMUSG00000080746	MGI:3651234	pseudogene	ribosomal protein SA, pseudogene 12
4	gene	149.1500	149.1668	negative	MGI_C57BL6J_97553	Pgd	NCBI_Gene:110208,ENSEMBL:ENSMUSG00000028961	MGI:97553	protein coding gene	phosphogluconate dehydrogenase
4	gene	149.1763	149.3077	negative	MGI_C57BL6J_108426	Kif1b	NCBI_Gene:16561,ENSEMBL:ENSMUSG00000063077	MGI:108426	protein coding gene	kinesin family member 1B
4	gene	149.2552	149.2567	negative	MGI_C57BL6J_3026951	6720462K09Rik	NA	NA	unclassified gene	RIKEN cDNA 6720462K09 gene
4	gene	149.3284	149.4267	negative	MGI_C57BL6J_1927086	Ube4b	NCBI_Gene:63958,ENSEMBL:ENSMUSG00000028960	MGI:1927086	protein coding gene	ubiquitination factor E4B
4	gene	149.3346	149.3359	positive	MGI_C57BL6J_1921560	Ube4bos3	NCBI_Gene:74310,ENSEMBL:ENSMUSG00000085286	MGI:1921560	antisense lncRNA gene	ubiquitination factor E4B, opposite strand 3
4	gene	149.3381	149.3385	positive	MGI_C57BL6J_3651969	Ube4bos2	ENSEMBL:ENSMUSG00000085807	MGI:3651969	antisense lncRNA gene	ubiquitination factor E4B, opposite strand 2
4	gene	149.3479	149.3653	positive	MGI_C57BL6J_1925072	Ube4bos1	ENSEMBL:ENSMUSG00000085819	MGI:1925072	antisense lncRNA gene	ubiquitination factor E4B, opposite strand 1
4	gene	149.4497	149.4665	negative	MGI_C57BL6J_1890409	Rbp7	NCBI_Gene:63954,ENSEMBL:ENSMUSG00000028996	MGI:1890409	protein coding gene	retinol binding protein 7, cellular
4	pseudogene	149.4573	149.4579	positive	MGI_C57BL6J_3651720	Trmt112-ps2	NCBI_Gene:627985,ENSEMBL:ENSMUSG00000070572	MGI:3651720	pseudogene	tRNA methyltransferase 11-2, pseudogene 2
4	gene	149.4676	149.4852	negative	MGI_C57BL6J_1913704	Nmnat1	NCBI_Gene:66454,ENSEMBL:ENSMUSG00000028992	MGI:1913704	protein coding gene	nicotinamide nucleotide adenylyltransferase 1
4	gene	149.4774	149.4843	positive	MGI_C57BL6J_3701129	Tmem274	NCBI_Gene:102636051,ENSEMBL:ENSMUSG00000087198	MGI:3701129	protein coding gene	transmembrame protein 274
4	gene	149.4852	149.4967	positive	MGI_C57BL6J_1916401	Lzic	NCBI_Gene:69151,ENSEMBL:ENSMUSG00000028990	MGI:1916401	protein coding gene	leucine zipper and CTNNBIP1 domain containing
4	pseudogene	149.5006	149.5010	positive	MGI_C57BL6J_3651971	Gm13071	ENSEMBL:ENSMUSG00000083811	MGI:3651971	pseudogene	predicted gene 13071
4	gene	149.5047	149.5052	positive	MGI_C57BL6J_1920314	2900080M03Rik	NA	NA	unclassified gene	RIKEN cDNA 2900080M03 gene
4	gene	149.5172	149.5173	negative	MGI_C57BL6J_5454158	Gm24381	ENSEMBL:ENSMUSG00000084646	MGI:5454158	snRNA gene	predicted gene, 24381
4	gene	149.5182	149.5664	positive	MGI_C57BL6J_1915756	Ctnnbip1	NCBI_Gene:67087,ENSEMBL:ENSMUSG00000028988	MGI:1915756	protein coding gene	catenin beta interacting protein 1
4	gene	149.5379	149.5379	positive	MGI_C57BL6J_5454968	Mir5616	miRBase:MI0019184,NCBI_Gene:100885828,ENSEMBL:ENSMUSG00000093403	MGI:5454968	miRNA gene	microRNA 5616
4	gene	149.5656	149.5678	negative	MGI_C57BL6J_3701131	Gm13066	ENSEMBL:ENSMUSG00000086949	MGI:3701131	lncRNA gene	predicted gene 13066
4	gene	149.5727	149.5740	positive	MGI_C57BL6J_1925218	A930041D05Rik	NA	NA	unclassified gene	RIKEN cDNA A930041D05 gene
4	gene	149.5865	149.6489	positive	MGI_C57BL6J_1929895	Clstn1	NCBI_Gene:65945,ENSEMBL:ENSMUSG00000039953	MGI:1929895	protein coding gene	calsyntenin 1
4	gene	149.6492	149.7026	negative	MGI_C57BL6J_1098211	Pik3cd	NCBI_Gene:18707,ENSEMBL:ENSMUSG00000039936	MGI:1098211	protein coding gene	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
4	gene	149.6555	149.6556	negative	MGI_C57BL6J_5531294	Mir7023	miRBase:MI0022872,NCBI_Gene:102465983,ENSEMBL:ENSMUSG00000098580	MGI:5531294	miRNA gene	microRNA 7023
4	gene	149.7154	149.7381	negative	MGI_C57BL6J_1196277	Tmem201	NCBI_Gene:230917,ENSEMBL:ENSMUSG00000044700	MGI:1196277	protein coding gene	transmembrane protein 201
4	gene	149.7440	149.7743	negative	MGI_C57BL6J_1917806	Slc25a33	NCBI_Gene:70556,ENSEMBL:ENSMUSG00000028982	MGI:1917806	protein coding gene	solute carrier family 25, member 33
4	gene	149.7485	149.7496	positive	MGI_C57BL6J_3651967	Gm13068	ENSEMBL:ENSMUSG00000085403	MGI:3651967	lncRNA gene	predicted gene 13068
4	gene	149.7763	149.7833	positive	MGI_C57BL6J_3802067	Gm16188	ENSEMBL:ENSMUSG00000085368	MGI:3802067	lncRNA gene	predicted gene 16188
4	gene	149.7784	149.7810	negative	MGI_C57BL6J_3651721	Gm13073	NCBI_Gene:105247217,ENSEMBL:ENSMUSG00000084807	MGI:3651721	lncRNA gene	predicted gene 13073
4	gene	149.7907	149.8025	positive	MGI_C57BL6J_5625239	Gm42354	NCBI_Gene:105247218	MGI:5625239	lncRNA gene	predicted gene, 42354
4	pseudogene	149.7933	149.7934	negative	MGI_C57BL6J_3651736	Gm13065	ENSEMBL:ENSMUSG00000081601	MGI:3651736	pseudogene	predicted gene 13065
4	pseudogene	149.8147	149.8152	negative	MGI_C57BL6J_3651735	Gm13064	ENSEMBL:ENSMUSG00000083173	MGI:3651735	pseudogene	predicted gene 13064
4	gene	149.8177	149.8178	positive	MGI_C57BL6J_4422058	n-R5s193	ENSEMBL:ENSMUSG00000064798	MGI:4422058	rRNA gene	nuclear encoded rRNA 5S 193
4	gene	149.8178	149.8178	positive	MGI_C57BL6J_6096167	Gm47301	ENSEMBL:ENSMUSG00000106221	MGI:6096167	miRNA gene	predicted gene, 47301
4	gene	149.8963	149.9550	negative	MGI_C57BL6J_1921896	Spsb1	NCBI_Gene:74646,ENSEMBL:ENSMUSG00000039911	MGI:1921896	protein coding gene	splA/ryanodine receptor domain and SOCS box containing 1
4	gene	149.9021	149.9081	positive	MGI_C57BL6J_3651970	Gm13070	NCBI_Gene:105247219,ENSEMBL:ENSMUSG00000086767	MGI:3651970	lncRNA gene	predicted gene 13070
4	gene	149.9795	150.0090	negative	MGI_C57BL6J_2140356	H6pd	NCBI_Gene:100198,ENSEMBL:ENSMUSG00000028980	MGI:2140356	protein coding gene	hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
4	gene	150.0294	150.0587	positive	MGI_C57BL6J_3651968	Gm13067	NCBI_Gene:102636131,ENSEMBL:ENSMUSG00000086665	MGI:3651968	lncRNA gene	predicted gene 13067
4	gene	150.0685	150.0686	positive	MGI_C57BL6J_3619363	Mir34a	miRBase:MI0000584,NCBI_Gene:723848,ENSEMBL:ENSMUSG00000065493	MGI:3619363	miRNA gene	microRNA 34a
4	gene	150.0685	150.0710	positive	MGI_C57BL6J_5611023	Gm37795	ENSEMBL:ENSMUSG00000102813	MGI:5611023	unclassified gene	predicted gene, 37795
4	gene	150.0874	150.1059	positive	MGI_C57BL6J_2442046	Gpr157	NCBI_Gene:269604,ENSEMBL:ENSMUSG00000047875	MGI:2442046	protein coding gene	G protein-coupled receptor 157
4	gene	150.1139	150.1193	negative	MGI_C57BL6J_3650866	Gm13093	ENSEMBL:ENSMUSG00000087094	MGI:3650866	lncRNA gene	predicted gene 13093
4	gene	150.1193	150.1442	positive	MGI_C57BL6J_1928369	Slc2a5	NCBI_Gene:56485,ENSEMBL:ENSMUSG00000028976	MGI:1928369	protein coding gene	solute carrier family 2 (facilitated glucose transporter), member 5
4	gene	150.1488	150.1689	positive	MGI_C57BL6J_3650865	Slc2a7	NCBI_Gene:435818,ENSEMBL:ENSMUSG00000062064	MGI:3650865	protein coding gene	solute carrier family 2 (facilitated glucose transporter), member 7
4	gene	150.1870	150.2013	negative	MGI_C57BL6J_1333786	Car6	NCBI_Gene:12353,ENSEMBL:ENSMUSG00000028972	MGI:1333786	protein coding gene	carbonic anhydrase 6
4	pseudogene	150.2280	150.2284	positive	MGI_C57BL6J_3650867	Gm13094	ENSEMBL:ENSMUSG00000082140	MGI:3650867	pseudogene	predicted gene 13094
4	gene	150.2367	150.2489	positive	MGI_C57BL6J_95393	Eno1	NCBI_Gene:13806,ENSEMBL:ENSMUSG00000063524	MGI:95393	protein coding gene	enolase 1, alpha non-neuron
4	gene	150.2592	150.2629	positive	MGI_C57BL6J_5592574	Gm33415	NCBI_Gene:102636312	MGI:5592574	lncRNA gene	predicted gene, 33415
4	gene	150.2816	150.6220	positive	MGI_C57BL6J_2683486	Rere	NCBI_Gene:68703,ENSEMBL:ENSMUSG00000039852	MGI:2683486	protein coding gene	arginine glutamic acid dipeptide (RE) repeats
4	pseudogene	150.3151	150.3156	negative	MGI_C57BL6J_3649661	Gm13092	NCBI_Gene:102638183,ENSEMBL:ENSMUSG00000085787	MGI:3649661	pseudogene	predicted gene 13092
4	gene	150.3212	150.3213	positive	MGI_C57BL6J_5452986	Gm23209	ENSEMBL:ENSMUSG00000089292	MGI:5452986	snRNA gene	predicted gene, 23209
4	gene	150.3287	150.3342	positive	MGI_C57BL6J_2443638	D030004A10Rik	NA	NA	unclassified gene	RIKEN cDNA D030004A10 gene
4	gene	150.4163	150.4180	positive	MGI_C57BL6J_2442500	E230012J19Rik	NA	NA	unclassified gene	RIKEN cDNA E230012J19 gene
4	gene	150.4780	150.4802	positive	MGI_C57BL6J_2442856	9430064G09Rik	NA	NA	unclassified gene	RIKEN cDNA 9430064G09 gene
4	gene	150.5119	150.5164	positive	MGI_C57BL6J_5625240	Gm42355	NCBI_Gene:105247220	MGI:5625240	protein coding gene	predicted gene, 42355
4	gene	150.5669	150.5685	negative	MGI_C57BL6J_3649653	Gm13091	ENSEMBL:ENSMUSG00000085213	MGI:3649653	lncRNA gene	predicted gene 13091
4	gene	150.6286	150.6522	negative	MGI_C57BL6J_2653235	Slc45a1	NCBI_Gene:242773,ENSEMBL:ENSMUSG00000039838	MGI:2653235	protein coding gene	solute carrier family 45, member 1
4	gene	150.6682	150.6788	negative	MGI_C57BL6J_3802017	Gm16079	ENSEMBL:ENSMUSG00000085869	MGI:3802017	lncRNA gene	predicted gene 16079
4	gene	150.7045	150.7391	positive	MGI_C57BL6J_5595759	Gm36600	NCBI_Gene:102640566	MGI:5595759	lncRNA gene	predicted gene, 36600
4	gene	150.7762	150.8182	negative	MGI_C57BL6J_5595965	Gm36806	NCBI_Gene:102640831	MGI:5595965	lncRNA gene	predicted gene, 36806
4	gene	150.8077	150.8097	positive	MGI_C57BL6J_5625241	Gm42356	NCBI_Gene:105247221	MGI:5625241	lncRNA gene	predicted gene, 42356
4	gene	150.8257	150.8396	positive	MGI_C57BL6J_3650887	Gm13049	ENSEMBL:ENSMUSG00000085097	MGI:3650887	lncRNA gene	predicted gene 13049
4	gene	150.8282	150.8549	negative	MGI_C57BL6J_1920598	1700045H11Rik	NCBI_Gene:73348,ENSEMBL:ENSMUSG00000078492	MGI:1920598	lncRNA gene	RIKEN cDNA 1700045H11 gene
4	pseudogene	150.8471	150.8475	positive	MGI_C57BL6J_3650886	Rps15a-ps3	NCBI_Gene:108168715,ENSEMBL:ENSMUSG00000084314	MGI:3650886	pseudogene	ribosomal protein S15A, pseudogene 3
4	gene	150.8538	150.8689	positive	MGI_C57BL6J_1921405	Errfi1	NCBI_Gene:74155,ENSEMBL:ENSMUSG00000028967	MGI:1921405	protein coding gene	ERBB receptor feedback inhibitor 1
4	gene	150.8971	150.9144	negative	MGI_C57BL6J_2135637	Park7	NCBI_Gene:57320,ENSEMBL:ENSMUSG00000028964	MGI:2135637	protein coding gene	Parkinson disease (autosomal recessive, early onset) 7
4	gene	150.9146	150.9461	positive	MGI_C57BL6J_1101059	Tnfrsf9	NCBI_Gene:21942,ENSEMBL:ENSMUSG00000028965	MGI:1101059	protein coding gene	tumor necrosis factor receptor superfamily, member 9
4	gene	150.9173	151.8619	negative	MGI_C57BL6J_2140230	Camta1	NCBI_Gene:100072,ENSEMBL:ENSMUSG00000014592	MGI:2140230	protein coding gene	calmodulin binding transcription activator 1
4	gene	150.9647	150.9649	positive	MGI_C57BL6J_5453182	Gm23405	ENSEMBL:ENSMUSG00000064476	MGI:5453182	snRNA gene	predicted gene, 23405
4	gene	150.9656	150.9809	negative	MGI_C57BL6J_5589279	Gm30120	NCBI_Gene:102631903	MGI:5589279	lncRNA gene	predicted gene, 30120
4	gene	150.9786	150.9800	negative	MGI_C57BL6J_1924312	5330422M15Rik	NA	NA	unclassified gene	RIKEN cDNA 5330422M15 gene
4	gene	150.9970	151.0447	negative	MGI_C57BL6J_1277134	Per3	NCBI_Gene:18628,ENSEMBL:ENSMUSG00000028957	MGI:1277134	protein coding gene	period circadian clock 3
4	gene	150.9971	151.0018	positive	MGI_C57BL6J_1346329	Uts2	NCBI_Gene:24111,ENSEMBL:ENSMUSG00000028963	MGI:1346329	protein coding gene	urotensin 2
4	gene	151.0448	151.0591	positive	MGI_C57BL6J_5621414	Gm38529	NCBI_Gene:102641068	MGI:5621414	protein coding gene	predicted gene, 38529
4	gene	151.0473	151.0580	negative	MGI_C57BL6J_1321389	Vamp3	NCBI_Gene:22319,ENSEMBL:ENSMUSG00000028955	MGI:1321389	protein coding gene	vesicle-associated membrane protein 3
4	gene	151.0890	151.0918	positive	MGI_C57BL6J_3650445	Gm13090	NCBI_Gene:105704528,ENSEMBL:ENSMUSG00000078491	MGI:3650445	protein coding gene	predicted gene 13090
4	gene	151.0934	151.1057	positive	MGI_C57BL6J_5826536	Gm46899	NCBI_Gene:108169018	MGI:5826536	lncRNA gene	predicted gene, 46899
4	gene	151.2160	151.2223	positive	MGI_C57BL6J_5589581	Gm30422	NCBI_Gene:102632317	MGI:5589581	lncRNA gene	predicted gene, 30422
4	gene	151.2224	151.2334	positive	MGI_C57BL6J_5825597	Gm45960	NCBI_Gene:108167361	MGI:5825597	lncRNA gene	predicted gene, 45960
4	gene	151.3765	151.3796	positive	MGI_C57BL6J_1914998	4930589P08Rik	ENSEMBL:ENSMUSG00000085593	MGI:1914998	lncRNA gene	RIKEN cDNA 4930589P08 gene
4	gene	151.4552	151.4577	positive	MGI_C57BL6J_5589503	Gm30344	NCBI_Gene:102632204	MGI:5589503	lncRNA gene	predicted gene, 30344
4	gene	151.6386	151.7233	negative	MGI_C57BL6J_5621327	Gm38442	NCBI_Gene:102632096	MGI:5621327	lncRNA gene	predicted gene, 38442
4	gene	151.8406	151.8678	positive	MGI_C57BL6J_5625242	Gm42357	NCBI_Gene:105247222	MGI:5625242	lncRNA gene	predicted gene, 42357
4	gene	151.8623	151.8633	positive	MGI_C57BL6J_1925157	9230110K08Rik	NCBI_Gene:102631977	MGI:1925157	lncRNA gene	RIKEN cDNA 9230110K08 gene
4	gene	151.9160	151.9164	negative	MGI_C57BL6J_5610369	Gm37141	ENSEMBL:ENSMUSG00000104142	MGI:5610369	unclassified gene	predicted gene, 37141
4	gene	151.9324	151.9329	negative	MGI_C57BL6J_1920975	1110001D16Rik	NA	NA	unclassified gene	RIKEN cDNA 1110001D16 gene
4	gene	151.9337	151.9821	positive	MGI_C57BL6J_2443386	Dnajc11	NCBI_Gene:230935,ENSEMBL:ENSMUSG00000039768	MGI:2443386	protein coding gene	DnaJ heat shock protein family (Hsp40) member C11
4	gene	151.9826	151.9890	negative	MGI_C57BL6J_1917126	Thap3	NCBI_Gene:69876,ENSEMBL:ENSMUSG00000039759	MGI:1917126	protein coding gene	THAP domain containing, apoptosis associated protein 3
4	gene	151.9896	151.9963	negative	MGI_C57BL6J_2446217	Phf13	NCBI_Gene:230936,ENSEMBL:ENSMUSG00000047777	MGI:2446217	protein coding gene	PHD finger protein 13
4	gene	152.0068	152.0096	negative	MGI_C57BL6J_3704239	Gm9768	ENSEMBL:ENSMUSG00000108391	MGI:3704239	unclassified gene	predicted gene 9768
4	gene	152.0088	152.0177	positive	MGI_C57BL6J_1919288	Klhl21	NCBI_Gene:242785,ENSEMBL:ENSMUSG00000073700	MGI:1919288	protein coding gene	kelch-like 21
4	gene	152.0198	152.0277	negative	MGI_C57BL6J_2140248	Zbtb48	NCBI_Gene:100090,ENSEMBL:ENSMUSG00000028952	MGI:2140248	protein coding gene	zinc finger and BTB domain containing 48
4	gene	152.0279	152.0386	negative	MGI_C57BL6J_1927505	Tas1r1	NCBI_Gene:110326,ENSEMBL:ENSMUSG00000028950	MGI:1927505	protein coding gene	taste receptor, type 1, member 1
4	gene	152.0392	152.0615	positive	MGI_C57BL6J_1921285	Nol9	NCBI_Gene:74035,ENSEMBL:ENSMUSG00000028948	MGI:1921285	protein coding gene	nucleolar protein 9
4	gene	152.0724	152.1154	positive	MGI_C57BL6J_2652860	Plekhg5	NCBI_Gene:269608,ENSEMBL:ENSMUSG00000039713	MGI:2652860	protein coding gene	pleckstrin homology domain containing, family G (with RhoGef domain) member 5
4	gene	152.1155	152.1201	positive	MGI_C57BL6J_1934667	Tnfrsf25	NCBI_Gene:85030,ENSEMBL:ENSMUSG00000024793	MGI:1934667	protein coding gene	tumor necrosis factor receptor superfamily, member 25
4	gene	152.1203	152.1524	negative	MGI_C57BL6J_1861630	Espn	NCBI_Gene:56226,ENSEMBL:ENSMUSG00000028943	MGI:1861630	protein coding gene	espin
4	pseudogene	152.1251	152.1269	negative	MGI_C57BL6J_5010037	Gm17852	NCBI_Gene:100415981	MGI:5010037	pseudogene	predicted gene, 17852
4	pseudogene	152.1560	152.1576	negative	MGI_C57BL6J_3649703	Gm13077	NCBI_Gene:100504731,ENSEMBL:ENSMUSG00000081544	MGI:3649703	pseudogene	predicted gene 13077
4	gene	152.1589	152.1625	positive	MGI_C57BL6J_1098624	Hes2	NCBI_Gene:15206,ENSEMBL:ENSMUSG00000028940	MGI:1098624	protein coding gene	hes family bHLH transcription factor 2
4	gene	152.1638	152.1664	positive	MGI_C57BL6J_5589781	Gm30622	NCBI_Gene:102632584	MGI:5589781	lncRNA gene	predicted gene, 30622
4	gene	152.1781	152.2719	positive	MGI_C57BL6J_1917275	Acot7	NCBI_Gene:70025,ENSEMBL:ENSMUSG00000028937	MGI:1917275	protein coding gene	acyl-CoA thioesterase 7
4	gene	152.2018	152.2021	negative	MGI_C57BL6J_5530882	Gm27500	ENSEMBL:ENSMUSG00000098385	MGI:5530882	unclassified non-coding RNA gene	predicted gene, 27500
4	gene	152.2039	152.2045	positive	MGI_C57BL6J_3649461	Gm13096	ENSEMBL:ENSMUSG00000085724	MGI:3649461	lncRNA gene	predicted gene 13096
4	gene	152.2739	152.2853	positive	MGI_C57BL6J_1916157	Gpr153	NCBI_Gene:100129,ENSEMBL:ENSMUSG00000042804	MGI:1916157	protein coding gene	G protein-coupled receptor 153
4	gene	152.2860	152.2919	negative	MGI_C57BL6J_104877	Hes3	NCBI_Gene:15207,ENSEMBL:ENSMUSG00000028946	MGI:104877	protein coding gene	hes family bHLH transcription factor 3
4	gene	152.2972	152.3071	positive	MGI_C57BL6J_1888594	Icmt	NCBI_Gene:57295,ENSEMBL:ENSMUSG00000039662	MGI:1888594	protein coding gene	isoprenylcysteine carboxyl methyltransferase
4	gene	152.3070	152.3194	negative	MGI_C57BL6J_2684989	Rnf207	NCBI_Gene:433809,ENSEMBL:ENSMUSG00000058498	MGI:2684989	protein coding gene	ring finger protein 207
4	gene	152.3213	152.3247	negative	MGI_C57BL6J_2445197	9430083M05Rik	NCBI_Gene:102632664	MGI:2445197	lncRNA gene	RIKEN cDNA 9430083M05 gene
4	gene	152.3244	152.3341	positive	MGI_C57BL6J_99262	Rpl22	NCBI_Gene:19934,ENSEMBL:ENSMUSG00000028936	MGI:99262	protein coding gene	ribosomal protein L22
4	gene	152.3387	152.3902	positive	MGI_C57BL6J_3036258	Chd5	NCBI_Gene:269610,ENSEMBL:ENSMUSG00000005045	MGI:3036258	protein coding gene	chromodomain helicase DNA binding protein 5
4	gene	152.3522	152.3536	negative	MGI_C57BL6J_3650945	Gm13645	ENSEMBL:ENSMUSG00000085179	MGI:3650945	lncRNA gene	predicted gene 13645
4	gene	152.3907	152.4779	negative	MGI_C57BL6J_109239	Kcnab2	NCBI_Gene:16498,ENSEMBL:ENSMUSG00000028931	MGI:109239	protein coding gene	potassium voltage-gated channel, shaker-related subfamily, beta member 2
4	gene	152.4108	152.4113	positive	MGI_C57BL6J_3840150	Gm16333	ENSEMBL:ENSMUSG00000090057	MGI:3840150	lncRNA gene	predicted gene 16333
4	gene	152.4739	152.5632	positive	MGI_C57BL6J_2384210	Nphp4	NCBI_Gene:260305,ENSEMBL:ENSMUSG00000039577	MGI:2384210	protein coding gene	nephronophthisis 4 (juvenile) homolog (human)
4	gene	152.5808	152.5836	negative	MGI_C57BL6J_5589893	Gm30734	NCBI_Gene:102632740	MGI:5589893	lncRNA gene	predicted gene, 30734
4	pseudogene	152.6774	152.6780	negative	MGI_C57BL6J_3650871	Gm13172	NCBI_Gene:667039,ENSEMBL:ENSMUSG00000083078	MGI:3650871	pseudogene	predicted gene 13172
4	gene	152.6975	152.7009	positive	MGI_C57BL6J_2685679	Gm833	NCBI_Gene:330004,ENSEMBL:ENSMUSG00000073699	MGI:2685679	lncRNA gene	predicted gene 833
4	gene	152.7628	152.7723	positive	MGI_C57BL6J_5590010	Gm30851	NCBI_Gene:102632895	MGI:5590010	lncRNA gene	predicted gene, 30851
4	gene	152.8515	152.8593	negative	MGI_C57BL6J_5590070	Gm30911	NCBI_Gene:102632969	MGI:5590070	lncRNA gene	predicted gene, 30911
4	gene	153.0135	153.0136	negative	MGI_C57BL6J_5455556	Gm25779	ENSEMBL:ENSMUSG00000080360	MGI:5455556	miRNA gene	predicted gene, 25779
4	gene	153.1456	153.1469	negative	MGI_C57BL6J_3650870	Gm13173	ENSEMBL:ENSMUSG00000085648	MGI:3650870	lncRNA gene	predicted gene 13173
4	gene	153.1483	153.1651	negative	MGI_C57BL6J_5590214	Gm31055	NCBI_Gene:102633157	MGI:5590214	lncRNA gene	predicted gene, 31055
4	gene	153.2182	153.2186	positive	MGI_C57BL6J_3650869	Gm13174	ENSEMBL:ENSMUSG00000087454	MGI:3650869	lncRNA gene	predicted gene 13174
4	gene	153.3732	153.4856	negative	MGI_C57BL6J_2685419	Ajap1	NCBI_Gene:230959,ENSEMBL:ENSMUSG00000039546	MGI:2685419	protein coding gene	adherens junction associated protein 1
4	gene	153.4967	153.4990	negative	MGI_C57BL6J_5625243	Gm42358	NCBI_Gene:105247223	MGI:5625243	lncRNA gene	predicted gene, 42358
4	gene	153.5189	153.5480	negative	MGI_C57BL6J_5625244	Gm42359	NCBI_Gene:105247224	MGI:5625244	lncRNA gene	predicted gene, 42359
4	gene	153.5545	153.5582	negative	MGI_C57BL6J_5590277	Gm31118	NCBI_Gene:102633243	MGI:5590277	lncRNA gene	predicted gene, 31118
4	gene	153.5857	153.5862	positive	MGI_C57BL6J_5590339	Gm31180	NCBI_Gene:102633329	MGI:5590339	lncRNA gene	predicted gene, 31180
4	gene	153.6124	153.6182	negative	MGI_C57BL6J_5625245	Gm42360	NCBI_Gene:105247225	MGI:5625245	lncRNA gene	predicted gene, 42360
4	gene	153.7985	153.8022	negative	MGI_C57BL6J_5590398	Gm31239	NCBI_Gene:102633405	MGI:5590398	lncRNA gene	predicted gene, 31239
4	gene	153.8345	153.8418	negative	MGI_C57BL6J_5590512	Gm31353	NCBI_Gene:102633557	MGI:5590512	lncRNA gene	predicted gene, 31353
4	gene	153.8764	153.8765	positive	MGI_C57BL6J_5455657	Gm25880	ENSEMBL:ENSMUSG00000077519	MGI:5455657	snoRNA gene	predicted gene, 25880
4	gene	153.9074	153.9087	positive	MGI_C57BL6J_3649445	Gm13115	ENSEMBL:ENSMUSG00000085390	MGI:3649445	lncRNA gene	predicted gene 13115
4	gene	153.9476	153.9505	negative	MGI_C57BL6J_3039570	BC039966	NCBI_Gene:407793,ENSEMBL:ENSMUSG00000086272	MGI:3039570	lncRNA gene	cDNA sequence BC039966
4	gene	153.9568	153.9572	negative	MGI_C57BL6J_3039640	BC049688	NA	NA	unclassified non-coding RNA gene	cDNA sequence BC049688
4	gene	153.9572	153.9619	positive	MGI_C57BL6J_2140680	A430005L14Rik	NCBI_Gene:97159,ENSEMBL:ENSMUSG00000047613	MGI:2140680	protein coding gene	RIKEN cDNA A430005L14 gene
4	gene	153.9644	153.9751	negative	MGI_C57BL6J_1196287	Dffb	NCBI_Gene:13368,ENSEMBL:ENSMUSG00000029027	MGI:1196287	protein coding gene	DNA fragmentation factor, beta subunit
4	gene	153.9751	154.0087	positive	MGI_C57BL6J_2687282	Cep104	NCBI_Gene:230967,ENSEMBL:ENSMUSG00000039523	MGI:2687282	protein coding gene	centrosomal protein 104
4	gene	153.9855	153.9885	negative	MGI_C57BL6J_5625246	Gm42361	NCBI_Gene:105247226	MGI:5625246	lncRNA gene	predicted gene, 42361
4	gene	153.9937	153.9993	negative	MGI_C57BL6J_5590725	Gm31566	NCBI_Gene:102633836	MGI:5590725	lncRNA gene	predicted gene, 31566
4	gene	154.0117	154.0215	positive	MGI_C57BL6J_1920196	Lrrc47	NCBI_Gene:72946,ENSEMBL:ENSMUSG00000029028	MGI:1920196	protein coding gene	leucine rich repeat containing 47
4	gene	154.0205	154.0262	negative	MGI_C57BL6J_1916109	Smim1	NCBI_Gene:68859,ENSEMBL:ENSMUSG00000078350	MGI:1916109	protein coding gene	small integral membrane protein 1
4	gene	154.0262	154.0566	positive	MGI_C57BL6J_5590831	Gm31672	NCBI_Gene:102633978	MGI:5590831	lncRNA gene	predicted gene, 31672
4	gene	154.0266	154.0427	negative	MGI_C57BL6J_2685881	Ccdc27	NCBI_Gene:381580,ENSEMBL:ENSMUSG00000039492	MGI:2685881	protein coding gene	coiled-coil domain containing 27
4	pseudogene	154.0437	154.0444	negative	MGI_C57BL6J_3701126	Gm13117	ENSEMBL:ENSMUSG00000080807	MGI:3701126	pseudogene	predicted gene 13117
4	pseudogene	154.0480	154.0481	negative	MGI_C57BL6J_3649251	Gm13114	ENSEMBL:ENSMUSG00000082073	MGI:3649251	pseudogene	predicted gene 13114
4	gene	154.0562	154.1402	negative	MGI_C57BL6J_1336991	Trp73	NCBI_Gene:22062,ENSEMBL:ENSMUSG00000029026	MGI:1336991	protein coding gene	transformation related protein 73
4	gene	154.0881	154.0889	positive	MGI_C57BL6J_1922418	4930533B18Rik	NA	NA	unclassified gene	RIKEN cDNA 4930533B18 gene
4	gene	154.0935	154.0984	positive	MGI_C57BL6J_3649248	Trp73os	ENSEMBL:ENSMUSG00000087071	MGI:3649248	antisense lncRNA gene	transformation related protein 73, opposite strand
4	gene	154.1340	154.1342	positive	MGI_C57BL6J_5455813	Gm26036	ENSEMBL:ENSMUSG00000088774	MGI:5455813	snoRNA gene	predicted gene, 26036
4	gene	154.1424	154.1674	positive	MGI_C57BL6J_1891749	Wrap73	NCBI_Gene:59002,ENSEMBL:ENSMUSG00000029029	MGI:1891749	protein coding gene	WD repeat containing, antisense to Trp73
4	gene	154.1575	154.1607	negative	MGI_C57BL6J_1915058	Tprgl	NCBI_Gene:67808,ENSEMBL:ENSMUSG00000029030	MGI:1915058	protein coding gene	transformation related protein 63 regulated like
4	gene	154.1607	154.1683	positive	MGI_C57BL6J_5621344	Gm38459	NCBI_Gene:102634100	MGI:5621344	lncRNA gene	predicted gene, 38459
4	gene	154.1707	154.2757	positive	MGI_C57BL6J_1919351	Megf6	NCBI_Gene:230971,ENSEMBL:ENSMUSG00000057751	MGI:1919351	protein coding gene	multiple EGF-like-domains 6
4	pseudogene	154.2163	154.2211	positive	MGI_C57BL6J_3651366	Gm13132	NCBI_Gene:105247227,ENSEMBL:ENSMUSG00000081276	MGI:3651366	pseudogene	predicted gene 13132
4	gene	154.2785	154.3017	negative	MGI_C57BL6J_2446219	Arhgef16	NCBI_Gene:230972,ENSEMBL:ENSMUSG00000029032	MGI:2446219	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 16
4	gene	154.3161	154.6369	negative	MGI_C57BL6J_1917923	Prdm16	NCBI_Gene:70673,ENSEMBL:ENSMUSG00000039410	MGI:1917923	protein coding gene	PR domain containing 16
4	gene	154.3361	154.3499	positive	MGI_C57BL6J_3642713	B230104I21Rik	ENSEMBL:ENSMUSG00000097871	MGI:3642713	protein coding gene	RIKEN cDNA B230104I21 gene

#} else {
#  print(paste0("There are too many peaks (",nrow(peaks)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
#}

Chromsome 10

#if(nrow(peaks) < 50){
for (i in 3){
#for (i in 1:1){
  #Plot 1

  #marker = find_marker(gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i])
  #gp <- g[,marker]
  #gp[gp==1] <- "AA"
  #gp[gp==2] <- "AB"
  #gp[gp==0] <- NA
  #plot_pxg(gp, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  #title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ###dev.off()

  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], gm$covar[peaks$phenotype[i]])
  blup_sub <- scan1blup(pr_sub[,chr], gm$covar[peaks$phenotype[i]])

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.eoi_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM])")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM])")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM])")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.eoi_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))


}

chr	type	start	stop	strand	ID	Name	Dbxref	gene_id	mgi_type	description
10	gene	45.57757	45.71234	positive	MGI_C57BL6J_2446110	Hace1	NCBI_Gene:209462,ENSEMBL:ENSMUSG00000038822	MGI:2446110	protein coding gene	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
10	gene	45.65696	45.66191	positive	MGI_C57BL6J_6096488	Gm47503	ENSEMBL:ENSMUSG00000111491	MGI:6096488	unclassified gene	predicted gene, 47503
10	pseudogene	45.68096	45.68153	positive	MGI_C57BL6J_6096487	Gm47502	ENSEMBL:ENSMUSG00000111036	MGI:6096487	pseudogene	predicted gene, 47502
10	gene	45.80756	45.85228	positive	MGI_C57BL6J_2443891	D030045P18Rik	NCBI_Gene:320363,ENSEMBL:ENSMUSG00000110874	MGI:2443891	lncRNA gene	RIKEN cDNA D030045P18 gene
10	gene	45.81675	45.81686	negative	MGI_C57BL6J_5530792	Gm27410	ENSEMBL:ENSMUSG00000098409	MGI:5530792	miRNA gene	predicted gene, 27410
10	pseudogene	45.87529	45.87609	positive	MGI_C57BL6J_3779731	Gpx4-ps2	NCBI_Gene:664781,ENSEMBL:ENSMUSG00000110841	MGI:3779731	pseudogene	glutathione peroxidase 4, pseudogene 2
10	gene	46.22864	46.32529	positive	MGI_C57BL6J_5594589	Gm35430	NCBI_Gene:102639008,ENSEMBL:ENSMUSG00000111182	MGI:5594589	lncRNA gene	predicted gene, 35430
10	gene	46.30368	46.32847	positive	MGI_C57BL6J_5623525	Gm40640	NCBI_Gene:105245147	MGI:5623525	lncRNA gene	predicted gene, 40640
10	gene	46.37761	46.37772	positive	MGI_C57BL6J_5455517	Gm25740	ENSEMBL:ENSMUSG00000094681	MGI:5455517	snRNA gene	predicted gene, 25740
10	gene	46.65851	46.65864	negative	MGI_C57BL6J_5453258	Gm23481	ENSEMBL:ENSMUSG00000077361	MGI:5453258	snoRNA gene	predicted gene, 23481
10	pseudogene	46.67014	46.67079	positive	MGI_C57BL6J_5012179	Gm19994	NCBI_Gene:100503976,ENSEMBL:ENSMUSG00000111754	MGI:5012179	pseudogene	predicted gene, 19994
10	gene	46.83835	46.83851	negative	MGI_C57BL6J_5455427	Gm25650	ENSEMBL:ENSMUSG00000065718	MGI:5455427	snRNA gene	predicted gene, 25650
10	pseudogene	46.85635	46.85650	negative	MGI_C57BL6J_6096586	Gm47562	ENSEMBL:ENSMUSG00000111499	MGI:6096586	pseudogene	predicted gene, 47562
10	gene	47.01171	47.10283	negative	MGI_C57BL6J_5594711	Gm35552	NCBI_Gene:102639181,ENSEMBL:ENSMUSG00000110843	MGI:5594711	lncRNA gene	predicted gene, 35552
10	gene	47.02425	47.03735	positive	MGI_C57BL6J_6096596	Gm47568	ENSEMBL:ENSMUSG00000111419	MGI:6096596	lncRNA gene	predicted gene, 47568
10	pseudogene	47.08032	47.08124	positive	MGI_C57BL6J_3781619	Gm3442	NCBI_Gene:100041632,ENSEMBL:ENSMUSG00000111057	MGI:3781619	pseudogene	predicted gene 3442
10	pseudogene	47.30470	47.31058	negative	MGI_C57BL6J_5011322	Gm19137	NCBI_Gene:100418319,ENSEMBL:ENSMUSG00000111719	MGI:5011322	pseudogene	predicted gene, 19137
10	pseudogene	47.32399	47.32585	negative	MGI_C57BL6J_3644660	Gm9068	NCBI_Gene:668252,ENSEMBL:ENSMUSG00000111072	MGI:3644660	pseudogene	predicted gene 9068
10	gene	47.64012	47.64053	positive	MGI_C57BL6J_6096600	Gm47571	ENSEMBL:ENSMUSG00000112702	MGI:6096600	unclassified gene	predicted gene, 47571
10	pseudogene	47.75305	47.75489	negative	MGI_C57BL6J_5825835	Gm46198	NCBI_Gene:108167780	MGI:5825835	pseudogene	predicted gene, 46198
10	pseudogene	47.94184	47.94543	positive	MGI_C57BL6J_6096219	Gm47331	ENSEMBL:ENSMUSG00000112917	MGI:6096219	pseudogene	predicted gene, 47331
10	pseudogene	47.97343	47.97370	positive	MGI_C57BL6J_6096220	Gm47332	ENSEMBL:ENSMUSG00000111911	MGI:6096220	pseudogene	predicted gene, 47332
10	gene	48.41136	48.41167	negative	MGI_C57BL6J_6096256	Gm47353	ENSEMBL:ENSMUSG00000112062	MGI:6096256	unclassified gene	predicted gene, 47353
10	gene	48.43782	48.43795	positive	MGI_C57BL6J_5453361	Gm23584	ENSEMBL:ENSMUSG00000088280	MGI:5453361	snoRNA gene	predicted gene, 23584
10	gene	48.53498	48.53636	negative	MGI_C57BL6J_6096258	Gm47354	ENSEMBL:ENSMUSG00000111262	MGI:6096258	lncRNA gene	predicted gene, 47354
10	pseudogene	48.56617	48.57000	positive	MGI_C57BL6J_6096260	Gm47355	ENSEMBL:ENSMUSG00000111585	MGI:6096260	pseudogene	predicted gene, 47355
10	gene	48.61931	48.61939	negative	MGI_C57BL6J_5454033	Gm24256	ENSEMBL:ENSMUSG00000065630	MGI:5454033	snRNA gene	predicted gene, 24256
10	pseudogene	48.67801	48.68186	negative	MGI_C57BL6J_6096261	Gm47356	ENSEMBL:ENSMUSG00000111436	MGI:6096261	pseudogene	predicted gene, 47356
10	pseudogene	48.68269	48.68297	positive	MGI_C57BL6J_6096273	Gm47364	ENSEMBL:ENSMUSG00000111581	MGI:6096273	pseudogene	predicted gene, 47364
10	pseudogene	48.69285	48.69441	positive	MGI_C57BL6J_6096294	Gm47377	ENSEMBL:ENSMUSG00000111900	MGI:6096294	pseudogene	predicted gene, 47377
10	pseudogene	48.81028	48.81048	negative	MGI_C57BL6J_6096297	Gm47379	ENSEMBL:ENSMUSG00000111704	MGI:6096297	pseudogene	predicted gene, 47379
10	pseudogene	48.85243	48.85353	positive	MGI_C57BL6J_3781649	Gm3473	NCBI_Gene:100041689,ENSEMBL:ENSMUSG00000111298	MGI:3781649	pseudogene	predicted gene 3473
10	gene	48.86858	48.87024	positive	MGI_C57BL6J_6096295	Gm47378	ENSEMBL:ENSMUSG00000111433	MGI:6096295	unclassified gene	predicted gene, 47378
10	gene	48.91012	48.91053	positive	MGI_C57BL6J_6096298	Gm47380	ENSEMBL:ENSMUSG00000111486	MGI:6096298	unclassified gene	predicted gene, 47380
10	pseudogene	49.09401	49.09473	negative	MGI_C57BL6J_6324767	Gm50490	ENSEMBL:ENSMUSG00000111374	MGI:6324767	pseudogene	predicted gene, 50490
10	gene	49.09483	49.78925	negative	MGI_C57BL6J_95815	Grik2	NCBI_Gene:14806,ENSEMBL:ENSMUSG00000056073	MGI:95815	protein coding gene	glutamate receptor, ionotropic, kainate 2 (beta 2)
10	gene	49.18899	49.19237	negative	MGI_C57BL6J_6095701	Gm47017	ENSEMBL:ENSMUSG00000112295	MGI:6095701	unclassified gene	predicted gene, 47017
10	pseudogene	49.19971	49.20026	positive	MGI_C57BL6J_5010697	Gm18512	NCBI_Gene:100417296	MGI:5010697	pseudogene	predicted gene, 18512
10	gene	49.21942	49.22565	negative	MGI_C57BL6J_5477037	Gm26543	ENSEMBL:ENSMUSG00000097884	MGI:5477037	lncRNA gene	predicted gene, 26543
10	gene	49.23692	49.23786	negative	MGI_C57BL6J_6095703	Gm47018	ENSEMBL:ENSMUSG00000112103	MGI:6095703	lncRNA gene	predicted gene, 47018
10	gene	49.48200	49.48448	negative	MGI_C57BL6J_6095711	Gm47023	ENSEMBL:ENSMUSG00000111935	MGI:6095711	unclassified gene	predicted gene, 47023
10	gene	49.66165	49.66327	negative	MGI_C57BL6J_6095699	Gm47016	ENSEMBL:ENSMUSG00000112340	MGI:6095699	unclassified gene	predicted gene, 47016
10	gene	49.70036	49.70283	negative	MGI_C57BL6J_6095709	Gm47022	ENSEMBL:ENSMUSG00000112142	MGI:6095709	unclassified gene	predicted gene, 47022
10	gene	49.70667	49.70789	negative	MGI_C57BL6J_2441822	A730043B01Rik	NA	NA	unclassified gene	RIKEN cDNA A730043B01 gene
10	gene	49.78883	49.79017	positive	MGI_C57BL6J_6097479	Gm48123	ENSEMBL:ENSMUSG00000111934	MGI:6097479	unclassified gene	predicted gene, 48123
10	gene	49.79933	49.80108	positive	MGI_C57BL6J_6097482	Gm48125	ENSEMBL:ENSMUSG00000110832	MGI:6097482	unclassified gene	predicted gene, 48125
10	pseudogene	49.82627	49.83011	positive	MGI_C57BL6J_6097487	Gm48128	ENSEMBL:ENSMUSG00000111551	MGI:6097487	pseudogene	predicted gene, 48128
10	pseudogene	49.95566	49.95598	negative	MGI_C57BL6J_6097490	Gm48130	ENSEMBL:ENSMUSG00000110973	MGI:6097490	pseudogene	predicted gene, 48130
10	gene	49.98003	49.98188	negative	MGI_C57BL6J_6097491	Gm48131	ENSEMBL:ENSMUSG00000111142	MGI:6097491	unclassified gene	predicted gene, 48131
10	gene	50.05703	50.11614	negative	MGI_C57BL6J_5623527	Gm40642	NCBI_Gene:105245149	MGI:5623527	lncRNA gene	predicted gene, 40642
10	pseudogene	50.17915	50.18299	negative	MGI_C57BL6J_6097493	Gm48132	ENSEMBL:ENSMUSG00000112349	MGI:6097493	pseudogene	predicted gene, 48132
10	pseudogene	50.18304	50.18415	negative	MGI_C57BL6J_6097693	Gm48269	ENSEMBL:ENSMUSG00000112049	MGI:6097693	pseudogene	predicted gene, 48269
10	gene	50.20327	50.25219	positive	MGI_C57BL6J_5594791	Gm35632	NCBI_Gene:102639285	MGI:5594791	lncRNA gene	predicted gene, 35632
10	pseudogene	50.25567	50.25952	positive	MGI_C57BL6J_6097694	Gm48270	ENSEMBL:ENSMUSG00000112667	MGI:6097694	pseudogene	predicted gene, 48270
10	gene	50.29265	50.29614	negative	MGI_C57BL6J_6097695	Gm48271	ENSEMBL:ENSMUSG00000110779	MGI:6097695	unclassified gene	predicted gene, 48271
10	gene	50.33376	50.33475	negative	MGI_C57BL6J_6097698	Gm48273	ENSEMBL:ENSMUSG00000110896	MGI:6097698	unclassified gene	predicted gene, 48273
10	gene	50.42130	50.42659	negative	MGI_C57BL6J_5825860	Gm46223	NCBI_Gene:108167809,ENSEMBL:ENSMUSG00000110720	MGI:5825860	protein coding gene	predicted gene, 46223
10	gene	50.42286	50.42386	negative	MGI_C57BL6J_5623528	Gm40643	NCBI_Gene:105245150	MGI:5623528	lncRNA gene	predicted gene, 40643
10	gene	50.42409	50.42434	positive	MGI_C57BL6J_6097700	Gm48274	ENSEMBL:ENSMUSG00000111083	MGI:6097700	unclassified gene	predicted gene, 48274
10	gene	50.42504	50.42533	negative	MGI_C57BL6J_6097702	Gm48275	ENSEMBL:ENSMUSG00000111202	MGI:6097702	lncRNA gene	predicted gene, 48275
10	pseudogene	50.48100	50.48217	positive	MGI_C57BL6J_3648225	Gm6991	NCBI_Gene:629652,ENSEMBL:ENSMUSG00000112456	MGI:3648225	pseudogene	predicted gene 6991
10	pseudogene	50.52158	50.52327	negative	MGI_C57BL6J_5825836	Gm46199	NCBI_Gene:108167781,ENSEMBL:ENSMUSG00000112529	MGI:5825836	pseudogene	predicted gene, 46199
10	gene	50.59267	50.85148	positive	MGI_C57BL6J_1925237	Ascc3	NCBI_Gene:77987,ENSEMBL:ENSMUSG00000038774	MGI:1925237	protein coding gene	activating signal cointegrator 1 complex subunit 3
10	gene	50.69647	50.69684	positive	MGI_C57BL6J_6097789	Gm48332	ENSEMBL:ENSMUSG00000112927	MGI:6097789	unclassified gene	predicted gene, 48332
10	pseudogene	50.75818	50.75870	positive	MGI_C57BL6J_5010305	Gm18120	NCBI_Gene:100416457,ENSEMBL:ENSMUSG00000112918	MGI:5010305	pseudogene	predicted gene, 18120
10	pseudogene	50.81372	50.81399	positive	MGI_C57BL6J_6097791	Gm48333	ENSEMBL:ENSMUSG00000112594	MGI:6097791	pseudogene	predicted gene, 48333
10	gene	50.86608	50.86636	negative	MGI_C57BL6J_5453660	Gm23883	ENSEMBL:ENSMUSG00000084635	MGI:5453660	unclassified non-coding RNA gene	predicted gene, 23883
10	gene	50.88916	50.89453	negative	MGI_C57BL6J_2444204	A230054N11Rik	NCBI_Gene:105245152	MGI:2444204	lncRNA gene	RIKEN cDNA A230054N11 gene
10	gene	50.89467	50.98916	positive	MGI_C57BL6J_98306	Sim1	NCBI_Gene:20464,ENSEMBL:ENSMUSG00000019913	MGI:98306	protein coding gene	single-minded family bHLH transcription factor 1
10	gene	51.17587	51.18709	negative	MGI_C57BL6J_5595076	Gm35917	NCBI_Gene:102639658	MGI:5595076	lncRNA gene	predicted gene, 35917
10	gene	51.18230	51.18241	positive	MGI_C57BL6J_5456034	Gm26257	ENSEMBL:ENSMUSG00000084449	MGI:5456034	snRNA gene	predicted gene, 26257
10	pseudogene	51.23881	51.23967	positive	MGI_C57BL6J_3648144	Gm5040	NCBI_Gene:268300,ENSEMBL:ENSMUSG00000111880	MGI:3648144	pseudogene	predicted gene 5040
10	pseudogene	51.45598	51.46140	positive	MGI_C57BL6J_5825826	Gm46189	NCBI_Gene:108167770,ENSEMBL:ENSMUSG00000112212	MGI:5825826	pseudogene	predicted gene, 46189
10	gene	51.48061	51.48670	positive	MGI_C57BL6J_102702	Lilr4b	NCBI_Gene:14727,ENSEMBL:ENSMUSG00000112023	MGI:102702	protein coding gene	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
10	gene	51.48061	51.49661	positive	MGI_C57BL6J_6121530	Gm49339	ENSEMBL:ENSMUSG00000062593	MGI:6121530	protein coding gene	predicted gene, 49339
10	gene	51.48953	51.52740	negative	MGI_C57BL6J_5623530	Gm40645	NCBI_Gene:105245153,ENSEMBL:ENSMUSG00000112766	MGI:5623530	lncRNA gene	predicted gene, 40645
10	gene	51.49088	51.49661	positive	MGI_C57BL6J_102701	Lilrb4a	NCBI_Gene:14728,ENSEMBL:ENSMUSG00000112148	MGI:102701	protein coding gene	leukocyte immunoglobulin-like receptor, subfamily B, member 4A
10	pseudogene	51.51187	51.51216	positive	MGI_C57BL6J_6098004	Gm48484	ENSEMBL:ENSMUSG00000112031	MGI:6098004	pseudogene	predicted gene, 48484
10	gene	51.52634	51.53116	positive	MGI_C57BL6J_5825861	Gm46224	NCBI_Gene:108167810,ENSEMBL:ENSMUSG00000112843	MGI:5825861	lncRNA gene	predicted gene, 46224
10	pseudogene	51.54304	51.54685	positive	MGI_C57BL6J_6098486	Gm48786	ENSEMBL:ENSMUSG00000112226	MGI:6098486	pseudogene	predicted gene, 48786
10	pseudogene	51.55107	51.55145	negative	MGI_C57BL6J_6098487	Gm48787	ENSEMBL:ENSMUSG00000112645	MGI:6098487	pseudogene	predicted gene, 48787
10	pseudogene	51.56895	51.57413	positive	MGI_C57BL6J_6098488	Gm48788	ENSEMBL:ENSMUSG00000112244	MGI:6098488	pseudogene	predicted gene, 48788
10	gene	51.58541	51.59059	negative	MGI_C57BL6J_1924546	Fam162b	NCBI_Gene:77296,ENSEMBL:ENSMUSG00000019909	MGI:1924546	protein coding gene	family with sequence similarity 162, member B
10	gene	51.61482	51.63146	negative	MGI_C57BL6J_2429498	Gprc6a	NCBI_Gene:210198,ENSEMBL:ENSMUSG00000019905	MGI:2429498	protein coding gene	G protein-coupled receptor, family C, group 6, member A
10	gene	51.66699	51.67583	positive	MGI_C57BL6J_1920540	1700042O05Rik	ENSEMBL:ENSMUSG00000112878	MGI:1920540	lncRNA gene	RIKEN cDNA 1700042O05 gene
10	gene	51.67776	51.73043	positive	MGI_C57BL6J_2445208	Rfx6	NCBI_Gene:320995,ENSEMBL:ENSMUSG00000019900	MGI:2445208	protein coding gene	regulatory factor X, 6
10	gene	51.75617	51.75719	negative	MGI_C57BL6J_1918340	4933411G06Rik	NCBI_Gene:71090,ENSEMBL:ENSMUSG00000062224	MGI:1918340	lncRNA gene	RIKEN cDNA 4933411G06 gene
10	gene	51.75726	51.76102	positive	MGI_C57BL6J_6096673	Gm47613	ENSEMBL:ENSMUSG00000112270	MGI:6096673	lncRNA gene	predicted gene, 47613
10	gene	51.76045	51.76102	positive	MGI_C57BL6J_1923200	4930594A02Rik	NA	NA	unclassified gene	RIKEN cDNA 4930594A02 gene
10	gene	51.78199	51.78694	negative	MGI_C57BL6J_6096675	Gm47614	ENSEMBL:ENSMUSG00000112337	MGI:6096675	lncRNA gene	predicted gene, 47614
10	gene	51.86385	51.97040	negative	MGI_C57BL6J_5623531	Gm40646	NCBI_Gene:105245154,ENSEMBL:ENSMUSG00000112659	MGI:5623531	lncRNA gene	predicted gene, 40646
10	gene	51.88862	51.88875	positive	MGI_C57BL6J_5453683	Gm23906	ENSEMBL:ENSMUSG00000088198	MGI:5453683	snoRNA gene	predicted gene, 23906
10	pseudogene	51.98634	51.98958	negative	MGI_C57BL6J_6096694	Gm47626	ENSEMBL:ENSMUSG00000112557	MGI:6096694	pseudogene	predicted gene, 47626
10	gene	52.02250	52.02847	positive	MGI_C57BL6J_2447460	Vgll2	NCBI_Gene:215031,ENSEMBL:ENSMUSG00000049641	MGI:2447460	protein coding gene	vestigial like family member 2
10	gene	52.03225	52.03239	positive	MGI_C57BL6J_5453861	Gm24084	ENSEMBL:ENSMUSG00000092914	MGI:5453861	miRNA gene	predicted gene, 24084
10	gene	52.04486	52.19540	negative	MGI_C57BL6J_97999	Ros1	NCBI_Gene:19886,ENSEMBL:ENSMUSG00000019893	MGI:97999	protein coding gene	Ros1 proto-oncogene
10	pseudogene	52.11932	52.11987	negative	MGI_C57BL6J_5313077	Gm20630	ENSEMBL:ENSMUSG00000093563	MGI:5313077	pseudogene	predicted gene 20630
10	pseudogene	52.18925	52.18987	positive	MGI_C57BL6J_5010698	Gm18513	NCBI_Gene:100417297,ENSEMBL:ENSMUSG00000093427	MGI:5010698	pseudogene	predicted gene, 18513
10	gene	52.23358	52.32138	positive	MGI_C57BL6J_1913936	Dcbld1	NCBI_Gene:66686,ENSEMBL:ENSMUSG00000019891	MGI:1913936	protein coding gene	discoidin, CUB and LCCL domain containing 1
10	gene	52.33585	52.38212	negative	MGI_C57BL6J_2149946	Gopc	NCBI_Gene:94221,ENSEMBL:ENSMUSG00000019861	MGI:2149946	protein coding gene	golgi associated PDZ and coiled-coil motif containing
10	pseudogene	52.34088	52.34368	negative	MGI_C57BL6J_3644486	Gm6627	NCBI_Gene:625811,ENSEMBL:ENSMUSG00000112550	MGI:3644486	pseudogene	predicted gene 6627
10	gene	52.35877	52.35885	positive	MGI_C57BL6J_5477235	Gm26741	ENSEMBL:ENSMUSG00000097704	MGI:5477235	protein coding gene	predicted gene, 26741
10	gene	52.37920	52.38123	negative	MGI_C57BL6J_6096616	Gm47580	ENSEMBL:ENSMUSG00000112317	MGI:6096616	unclassified gene	predicted gene, 47580
10	pseudogene	52.38463	52.38511	negative	MGI_C57BL6J_3645086	Rps19-ps10	NCBI_Gene:668294,ENSEMBL:ENSMUSG00000089800	MGI:3645086	pseudogene	ribosomal protein S19, pseudogene 10
10	gene	52.38886	52.40463	positive	MGI_C57BL6J_1913900	Nepn	NCBI_Gene:66650,ENSEMBL:ENSMUSG00000038624	MGI:1913900	protein coding gene	nephrocan
10	gene	52.41755	52.44019	positive	MGI_C57BL6J_1196365	Nus1	NCBI_Gene:52014,ENSEMBL:ENSMUSG00000023068	MGI:1196365	protein coding gene	NUS1 dehydrodolichyl diphosphate synthase subunit
10	gene	52.45037	52.45251	positive	MGI_C57BL6J_6096667	Gm47608	ENSEMBL:ENSMUSG00000112563	MGI:6096667	unclassified gene	predicted gene, 47608
10	gene	52.45141	52.45359	negative	MGI_C57BL6J_6096665	Gm47607	ENSEMBL:ENSMUSG00000112361	MGI:6096665	unclassified gene	predicted gene, 47607
10	pseudogene	52.51440	52.51478	negative	MGI_C57BL6J_6096669	Gm47609	ENSEMBL:ENSMUSG00000112464	MGI:6096669	pseudogene	predicted gene, 47609
10	pseudogene	52.51829	52.51848	negative	MGI_C57BL6J_6096670	Gm47610	ENSEMBL:ENSMUSG00000111887	MGI:6096670	pseudogene	predicted gene, 47610
10	pseudogene	52.52302	52.52686	positive	MGI_C57BL6J_6096671	Gm47611	ENSEMBL:ENSMUSG00000112149	MGI:6096671	pseudogene	predicted gene, 47611
10	pseudogene	52.52852	52.52902	positive	MGI_C57BL6J_6096672	Gm47612	ENSEMBL:ENSMUSG00000112791	MGI:6096672	pseudogene	predicted gene, 47612
10	pseudogene	52.54232	52.54574	negative	MGI_C57BL6J_99153	Zfa-ps	NCBI_Gene:22639,ENSEMBL:ENSMUSG00000049576	MGI:99153	pseudogene	zinc finger protein, autosomal, pseudogene
10	gene	52.59401	52.60067	positive	MGI_C57BL6J_5595224	Gm36065	NCBI_Gene:102639851,ENSEMBL:ENSMUSG00000112552	MGI:5595224	lncRNA gene	predicted gene, 36065
10	gene	52.69050	53.11162	positive	MGI_C57BL6J_2139810	Slc35f1	NCBI_Gene:215085,ENSEMBL:ENSMUSG00000038602	MGI:2139810	protein coding gene	solute carrier family 35, member F1
10	gene	52.69384	52.69767	positive	MGI_C57BL6J_6096690	Gm47624	ENSEMBL:ENSMUSG00000111918	MGI:6096690	unclassified gene	predicted gene, 47624
10	gene	52.76875	52.77200	negative	MGI_C57BL6J_5595282	Gm36123	NCBI_Gene:102639925	MGI:5595282	lncRNA gene	predicted gene, 36123
10	gene	52.80149	52.80170	positive	MGI_C57BL6J_6096688	Gm47623	ENSEMBL:ENSMUSG00000112257	MGI:6096688	unclassified gene	predicted gene, 47623
10	gene	52.80436	52.81582	positive	MGI_C57BL6J_5623532	Gm40647	NCBI_Gene:105245155	MGI:5623532	lncRNA gene	predicted gene, 40647
10	gene	52.82431	52.82684	positive	MGI_C57BL6J_6096684	Gm47621	ENSEMBL:ENSMUSG00000112576	MGI:6096684	unclassified gene	predicted gene, 47621
10	gene	52.90564	52.90574	positive	MGI_C57BL6J_5455441	Gm25664	ENSEMBL:ENSMUSG00000088322	MGI:5455441	snRNA gene	predicted gene, 25664
10	gene	53.10254	53.10495	positive	MGI_C57BL6J_6096686	Gm47622	ENSEMBL:ENSMUSG00000112681	MGI:6096686	lncRNA gene	predicted gene, 47622
10	gene	53.18117	53.22046	positive	MGI_C57BL6J_5623534	Gm40649	NCBI_Gene:105245157,ENSEMBL:ENSMUSG00000112376	MGI:5623534	lncRNA gene	predicted gene, 40649
10	gene	53.20302	53.20432	negative	MGI_C57BL6J_6096710	Gm47637	ENSEMBL:ENSMUSG00000112853	MGI:6096710	unclassified gene	predicted gene, 47637
10	gene	53.23519	53.26074	positive	MGI_C57BL6J_5595332	Gm36173	NCBI_Gene:102639992,ENSEMBL:ENSMUSG00000112835	MGI:5595332	lncRNA gene	predicted gene, 36173
10	gene	53.27344	53.37995	negative	MGI_C57BL6J_3642684	Cep85l	NCBI_Gene:100038725,ENSEMBL:ENSMUSG00000038594	MGI:3642684	protein coding gene	centrosomal protein 85-like
10	gene	53.27804	53.28015	negative	MGI_C57BL6J_1922904	1700003O08Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 1700003O08 gene
10	gene	53.28027	53.28369	positive	MGI_C57BL6J_5011580	Gm19395	NCBI_Gene:100502820,ENSEMBL:ENSMUSG00000112709	MGI:5011580	lncRNA gene	predicted gene, 19395
10	pseudogene	53.29897	53.30019	negative	MGI_C57BL6J_5010008	Gm17823	NCBI_Gene:100381209,ENSEMBL:ENSMUSG00000112239	MGI:5010008	pseudogene	predicted gene, 17823
10	gene	53.33767	53.34600	positive	MGI_C57BL6J_97622	Pln	NCBI_Gene:18821,ENSEMBL:ENSMUSG00000038583	MGI:97622	protein coding gene	phospholamban
10	gene	53.33775	53.34508	negative	MGI_C57BL6J_6096722	Gm47644	ENSEMBL:ENSMUSG00000112734	MGI:6096722	lncRNA gene	predicted gene, 47644
10	gene	53.37945	53.38139	positive	MGI_C57BL6J_6096717	Gm47641	ENSEMBL:ENSMUSG00000111892	MGI:6096717	unclassified gene	predicted gene, 47641
10	gene	53.38038	53.39875	negative	MGI_C57BL6J_5825862	Gm46225	NCBI_Gene:108167811	MGI:5825862	lncRNA gene	predicted gene, 46225
10	gene	53.40988	53.42490	positive	MGI_C57BL6J_5595388	Gm36229	NCBI_Gene:102640074,ENSEMBL:ENSMUSG00000112132	MGI:5595388	lncRNA gene	predicted gene, 36229
10	pseudogene	53.47476	53.47812	positive	MGI_C57BL6J_3643175	Tmem229b-ps	NCBI_Gene:432460,ENSEMBL:ENSMUSG00000056219	MGI:3643175	pseudogene	transmembrane protein 229B, pseudogene
10	gene	53.48822	53.51455	positive	MGI_C57BL6J_5623535	Gm40650	NCBI_Gene:105245158,ENSEMBL:ENSMUSG00000112733	MGI:5623535	lncRNA gene	predicted gene, 40650
10	gene	53.48824	53.51041	positive	MGI_C57BL6J_5595439	Gm36280	NCBI_Gene:102640143	MGI:5595439	lncRNA gene	predicted gene, 36280
10	gene	53.49844	53.51899	negative	MGI_C57BL6J_5295703	Gm20597	NCBI_Gene:100502868,ENSEMBL:ENSMUSG00000112739	MGI:5295703	lncRNA gene	predicted gene, 20597
10	pseudogene	53.52966	53.53019	negative	MGI_C57BL6J_6096852	Gm47722	ENSEMBL:ENSMUSG00000112440	MGI:6096852	pseudogene	predicted gene, 47722
10	gene	53.53632	53.63063	negative	MGI_C57BL6J_1918817	Mcm9	NCBI_Gene:71567,ENSEMBL:ENSMUSG00000058298	MGI:1918817	protein coding gene	minichromosome maintenance 9 homologous recombination repair factor
10	gene	53.56967	53.57158	positive	MGI_C57BL6J_6096879	Gm47738	ENSEMBL:ENSMUSG00000112530	MGI:6096879	lncRNA gene	predicted gene, 47738
10	gene	53.57062	53.57576	negative	MGI_C57BL6J_6096881	Gm47739	ENSEMBL:ENSMUSG00000112731	MGI:6096881	lncRNA gene	predicted gene, 47739
10	gene	53.59282	53.59312	negative	MGI_C57BL6J_6096877	Gm47737	ENSEMBL:ENSMUSG00000112634	MGI:6096877	unclassified gene	predicted gene, 47737
10	gene	53.59676	53.60923	positive	MGI_C57BL6J_1913653	Asf1a	NCBI_Gene:66403,ENSEMBL:ENSMUSG00000019857	MGI:1913653	protein coding gene	anti-silencing function 1A histone chaperone
10	gene	53.59738	53.59840	positive	MGI_C57BL6J_3782074	Gm3902	NCBI_Gene:100042554	MGI:3782074	unclassified gene	predicted gene 3902
10	gene	53.61437	53.61527	positive	MGI_C57BL6J_1922219	4930466K18Rik	ENSEMBL:ENSMUSG00000112332	MGI:1922219	unclassified gene	RIKEN cDNA 4930466K18 gene
10	gene	53.63313	53.75123	negative	MGI_C57BL6J_1923156	Fam184a	NCBI_Gene:75906,ENSEMBL:ENSMUSG00000019856	MGI:1923156	protein coding gene	family with sequence similarity 184, member A
10	gene	53.63546	53.65844	positive	MGI_C57BL6J_2445146	B930046M08Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA B930046M08 gene
10	gene	53.79802	53.80353	negative	MGI_C57BL6J_6097164	Gm47915	ENSEMBL:ENSMUSG00000112809	MGI:6097164	lncRNA gene	predicted gene, 47915
10	gene	53.90478	54.07661	negative	MGI_C57BL6J_104677	Man1a	NCBI_Gene:17155,ENSEMBL:ENSMUSG00000003746	MGI:104677	protein coding gene	mannosidase 1, alpha
10	gene	54.00701	54.01045	negative	MGI_C57BL6J_2442180	A030011A13Rik	NA	NA	unclassified gene	RIKEN cDNA A030011A13 gene
10	gene	54.06381	54.06507	positive	MGI_C57BL6J_6097168	Gm47917	ENSEMBL:ENSMUSG00000112824	MGI:6097168	lncRNA gene	predicted gene, 47917
10	gene	54.07592	54.08108	positive	MGI_C57BL6J_4439922	Gm16998	NCBI_Gene:100502920,ENSEMBL:ENSMUSG00000097069	MGI:4439922	lncRNA gene	predicted gene, 16998
10	gene	54.16517	54.22882	positive	MGI_C57BL6J_5623536	Gm40651	NCBI_Gene:105245159	MGI:5623536	lncRNA gene	predicted gene, 40651
10	pseudogene	54.21173	54.21282	positive	MGI_C57BL6J_6097247	Gm47967	ENSEMBL:ENSMUSG00000112013	MGI:6097247	pseudogene	predicted gene, 47967
10	pseudogene	54.21287	54.21672	positive	MGI_C57BL6J_6097248	Gm47968	ENSEMBL:ENSMUSG00000112516	MGI:6097248	pseudogene	predicted gene, 47968
10	gene	54.31123	54.31133	negative	MGI_C57BL6J_5455954	Gm26177	ENSEMBL:ENSMUSG00000094738	MGI:5455954	snRNA gene	predicted gene, 26177
10	gene	54.34399	54.36522	negative	MGI_C57BL6J_5595494	Gm36335	NCBI_Gene:102640213	MGI:5595494	lncRNA gene	predicted gene, 36335
10	pseudogene	54.67079	54.67170	negative	MGI_C57BL6J_6097251	Gm47970	ENSEMBL:ENSMUSG00000112882	MGI:6097251	pseudogene	predicted gene, 47970
10	gene	54.71298	54.71304	negative	MGI_C57BL6J_5455379	Gm25602	ENSEMBL:ENSMUSG00000088987	MGI:5455379	snRNA gene	predicted gene, 25602
10	pseudogene	55.05719	55.05757	positive	MGI_C57BL6J_5591008	Gm31849	NCBI_Gene:102634209,ENSEMBL:ENSMUSG00000112575	MGI:5591008	pseudogene	predicted gene, 31849
10	pseudogene	55.12433	55.12479	positive	MGI_C57BL6J_5825827	Gm46190	NCBI_Gene:108167771,ENSEMBL:ENSMUSG00000112755	MGI:5825827	pseudogene	predicted gene, 46190
10	gene	56.01429	56.22946	negative	MGI_C57BL6J_2442827	Tbc1d32	NCBI_Gene:544696,ENSEMBL:ENSMUSG00000038122	MGI:2442827	protein coding gene	TBC1 domain family, member 32
10	gene	56.08383	56.10638	positive	MGI_C57BL6J_1919456	1700001I21Rik	NA	NA	unclassified gene	RIKEN cDNA 1700001I21 gene
10	gene	56.08383	56.11688	positive	MGI_C57BL6J_1920640	Msl3l2	NCBI_Gene:73390,ENSEMBL:ENSMUSG00000047669	MGI:1920640	protein coding gene	MSL3 like 2
10	pseudogene	56.09816	56.10361	negative	MGI_C57BL6J_5588953	Gm29794	NCBI_Gene:101056198,ENSEMBL:ENSMUSG00000112528	MGI:5588953	pseudogene	predicted gene, 29794
10	pseudogene	56.35441	56.35510	negative	MGI_C57BL6J_3647445	Rps8-ps1	NCBI_Gene:629732,ENSEMBL:ENSMUSG00000071303	MGI:3647445	pseudogene	ribosomal protein S8, pseudogene 1
10	gene	56.37730	56.40251	positive	MGI_C57BL6J_95713	Gja1	NCBI_Gene:14609,ENSEMBL:ENSMUSG00000050953	MGI:95713	protein coding gene	gap junction protein, alpha 1
10	gene	56.39514	56.39929	positive	MGI_C57BL6J_5595619	Gm36460	NCBI_Gene:102640390	MGI:5595619	lncRNA gene	predicted gene, 36460
10	gene	56.41734	56.41800	negative	MGI_C57BL6J_5595676	Gm36517	NCBI_Gene:102640461	MGI:5595676	lncRNA gene	predicted gene, 36517
10	gene	56.43151	56.47597	positive	MGI_C57BL6J_5595754	Gm36595	NCBI_Gene:102640560,ENSEMBL:ENSMUSG00000112833	MGI:5595754	lncRNA gene	predicted gene, 36595
10	gene	56.43635	56.43760	negative	MGI_C57BL6J_1921224	4930452L12Rik	ENSEMBL:ENSMUSG00000112175	MGI:1921224	lncRNA gene	RIKEN cDNA 4930452L12 gene
10	pseudogene	56.49725	56.49830	positive	MGI_C57BL6J_3648185	Gm9118	NCBI_Gene:668347,ENSEMBL:ENSMUSG00000112825	MGI:3648185	pseudogene	predicted gene 9118
10	gene	56.50450	56.50529	positive	MGI_C57BL6J_1915175	1700066D14Rik	NA	NA	unclassified gene	RIKEN cDNA 1700066D14 gene
10	pseudogene	56.65592	56.65709	positive	MGI_C57BL6J_3704361	Gm9795	NCBI_Gene:100042622,ENSEMBL:ENSMUSG00000045048	MGI:3704361	pseudogene	predicted pseudogene 9795
10	gene	56.74513	56.74825	positive	MGI_C57BL6J_3641872	Gm9956	NA	NA	protein coding gene	predicted gene 9956
10	pseudogene	56.82908	56.83098	negative	MGI_C57BL6J_5591090	Gm31931	NCBI_Gene:102634322,ENSEMBL:ENSMUSG00000112191	MGI:5591090	pseudogene	predicted gene, 31931
10	gene	56.90967	56.91477	negative	MGI_C57BL6J_6097373	Gm48053	ENSEMBL:ENSMUSG00000112837	MGI:6097373	lncRNA gene	predicted gene, 48053
10	gene	56.93255	56.93523	negative	MGI_C57BL6J_5595928	Gm36769	NCBI_Gene:102640785	MGI:5595928	lncRNA gene	predicted gene, 36769
10	gene	56.97033	56.98223	negative	MGI_C57BL6J_5595986	Gm36827	NCBI_Gene:102640859,ENSEMBL:ENSMUSG00000112327	MGI:5595986	lncRNA gene	predicted gene, 36827
10	gene	57.11722	57.16018	positive	MGI_C57BL6J_5623537	Gm40652	NCBI_Gene:105245160,ENSEMBL:ENSMUSG00000112345	MGI:5623537	lncRNA gene	predicted gene, 40652
10	gene	57.17403	57.17413	positive	MGI_C57BL6J_5454062	Gm24285	ENSEMBL:ENSMUSG00000088253	MGI:5454062	snRNA gene	predicted gene, 24285
10	pseudogene	57.26650	57.26675	negative	MGI_C57BL6J_6097376	Gm48055	ENSEMBL:ENSMUSG00000112217	MGI:6097376	pseudogene	predicted gene, 48055
10	pseudogene	57.29086	57.29261	positive	MGI_C57BL6J_3646413	Gm7001	NCBI_Gene:629742,ENSEMBL:ENSMUSG00000111954	MGI:3646413	pseudogene	predicted gene 7001
10	pseudogene	57.38642	57.39115	positive	MGI_C57BL6J_3648388	Gm9129	NCBI_Gene:668363,ENSEMBL:ENSMUSG00000111969	MGI:3648388	pseudogene	predicted gene 9129
10	pseudogene	57.41304	57.41371	negative	MGI_C57BL6J_5011441	Gm19256	NCBI_Gene:100462966,ENSEMBL:ENSMUSG00000111988	MGI:5011441	pseudogene	predicted gene, 19256
10	gene	57.47838	57.48635	negative	MGI_C57BL6J_1922178	4930467K11Rik	NCBI_Gene:74928,ENSEMBL:ENSMUSG00000097370	MGI:1922178	lncRNA gene	RIKEN cDNA 4930467K11 gene
10	gene	57.48619	57.51314	positive	MGI_C57BL6J_96239	Hsf2	NCBI_Gene:15500,ENSEMBL:ENSMUSG00000019878	MGI:96239	protein coding gene	heat shock factor 2
10	gene	57.50648	57.50871	positive	MGI_C57BL6J_2441757	9630030I15Rik	NA	NA	unclassified gene	RIKEN cDNA 9630030I15 gene
10	gene	57.51577	57.53253	negative	MGI_C57BL6J_1926228	Serinc1	NCBI_Gene:56442,ENSEMBL:ENSMUSG00000019877	MGI:1926228	protein coding gene	serine incorporator 1
10	pseudogene	57.60125	57.60214	positive	MGI_C57BL6J_3644204	Rpl48-ps1	NCBI_Gene:211619,ENSEMBL:ENSMUSG00000093406	MGI:3644204	pseudogene	ribosomal protein L48, pseudogene 1
10	gene	57.63198	57.74111	positive	MGI_C57BL6J_101937	Pkib	NCBI_Gene:18768,ENSEMBL:ENSMUSG00000019876	MGI:101937	protein coding gene	protein kinase inhibitor beta, cAMP dependent, testis specific
10	pseudogene	57.65793	57.65884	positive	MGI_C57BL6J_5010438	Gm18253	NCBI_Gene:100416791	MGI:5010438	pseudogene	predicted gene, 18253
10	pseudogene	57.78229	57.78300	positive	MGI_C57BL6J_3645433	Gm5777	NCBI_Gene:544698,ENSEMBL:ENSMUSG00000093552	MGI:3645433	pseudogene	predicted gene 5777
10	gene	57.78488	57.78845	positive	MGI_C57BL6J_101916	Fabp7	NCBI_Gene:12140,ENSEMBL:ENSMUSG00000019874	MGI:101916	protein coding gene	fatty acid binding protein 7, brain
10	gene	57.79433	57.81183	positive	MGI_C57BL6J_1931437	Smpdl3a	NCBI_Gene:57319,ENSEMBL:ENSMUSG00000019872	MGI:1931437	protein coding gene	sphingomyelin phosphodiesterase, acid-like 3A
10	gene	58.22240	58.22678	negative	MGI_C57BL6J_3034577	AW822073	NCBI_Gene:100504180,ENSEMBL:ENSMUSG00000058537	MGI:3034577	protein coding gene	expressed sequence AW822073
10	pseudogene	58.22786	58.22866	negative	MGI_C57BL6J_3798168	Gm10807	NCBI_Gene:100502899,ENSEMBL:ENSMUSG00000057216	MGI:3798168	pseudogene	predicted gene 10807
10	gene	58.22951	58.23352	negative	MGI_C57BL6J_1921649	Duxf3	NCBI_Gene:74399,ENSEMBL:ENSMUSG00000075046	MGI:1921649	protein coding gene	double homeobox family member 3
10	gene	58.23485	58.23670	negative	MGI_C57BL6J_3645498	Gm4981	NCBI_Gene:245263,ENSEMBL:ENSMUSG00000075045	MGI:3645498	protein coding gene	predicted gene 4981
10	gene	58.23903	58.25270	negative	MGI_C57BL6J_3641953	Gm9919	NCBI_Gene:791309	MGI:3641953	unclassified gene	predicted gene 9919
10	pseudogene	58.23961	58.24066	negative	MGI_C57BL6J_5011644	Gm19459	ENSEMBL:ENSMUSG00000093601	MGI:5011644	pseudogene	predicted gene, 19459
10	gene	58.25429	58.30560	positive	MGI_C57BL6J_1917547	Gcc2	NCBI_Gene:70297,ENSEMBL:ENSMUSG00000038039	MGI:1917547	protein coding gene	GRIP and coiled-coil domain containing 2
10	gene	58.28443	58.28518	positive	MGI_C57BL6J_1919743	2610202C22Rik	NA	NA	unclassified gene	RIKEN cDNA 2610202C22 gene
10	gene	58.30797	58.31285	positive	MGI_C57BL6J_5623553	Gm40668	NCBI_Gene:105245180	MGI:5623553	lncRNA gene	predicted gene, 40668
10	gene	58.32343	58.42469	positive	MGI_C57BL6J_1195263	Lims1	NCBI_Gene:110829,ENSEMBL:ENSMUSG00000019920	MGI:1195263	protein coding gene	LIM and senescent cell antigen-like domains 1
10	gene	58.32869	58.33295	positive	MGI_C57BL6J_2443103	A130099P19Rik	NA	NA	unclassified gene	RIKEN cDNA A130099P19 gene
10	gene	58.34950	58.34960	negative	MGI_C57BL6J_5452835	Gm23058	ENSEMBL:ENSMUSG00000070214	MGI:5452835	snRNA gene	predicted gene, 23058
10	gene	58.44685	58.49436	positive	MGI_C57BL6J_894323	Ranbp2	NCBI_Gene:19386,ENSEMBL:ENSMUSG00000003226	MGI:894323	protein coding gene	RAN binding protein 2
10	gene	58.49770	58.57624	positive	MGI_C57BL6J_1923388	Ccdc138	NCBI_Gene:76138,ENSEMBL:ENSMUSG00000038010	MGI:1923388	protein coding gene	coiled-coil domain containing 138
10	gene	58.54571	58.54836	positive	MGI_C57BL6J_2443144	C230083P08Rik	NA	NA	unclassified gene	RIKEN cDNA C230083P08 gene
10	pseudogene	58.55526	58.55606	positive	MGI_C57BL6J_5010227	Gm18042	NCBI_Gene:100416327,ENSEMBL:ENSMUSG00000112670	MGI:5010227	pseudogene	predicted gene, 18042
10	gene	58.60078	58.67570	negative	MGI_C57BL6J_1343498	Edar	NCBI_Gene:13608,ENSEMBL:ENSMUSG00000003227	MGI:1343498	protein coding gene	ectodysplasin-A receptor
10	gene	58.67738	58.68388	negative	MGI_C57BL6J_5595317	Gm36158	NCBI_Gene:102639969	MGI:5595317	lncRNA gene	predicted gene, 36158
10	gene	58.69674	58.70428	positive	MGI_C57BL6J_2143891	BB019430	NCBI_Gene:103505,ENSEMBL:ENSMUSG00000091526	MGI:2143891	lncRNA gene	expressed sequence BB019430
10	gene	58.70458	58.70465	negative	MGI_C57BL6J_5454832	Gm25055	ENSEMBL:ENSMUSG00000087994	MGI:5454832	snoRNA gene	predicted gene, 25055
10	gene	58.71361	58.71821	negative	MGI_C57BL6J_4937176	Gm17542	ENSEMBL:ENSMUSG00000091731	MGI:4937176	protein coding gene	predicted gene, 17542
10	pseudogene	58.75727	58.75957	positive	MGI_C57BL6J_3644988	Gm6494	NCBI_Gene:624335,ENSEMBL:ENSMUSG00000112424	MGI:3644988	pseudogene	predicted gene 6494
10	gene	58.81239	59.13892	positive	MGI_C57BL6J_2444637	Sh3rf3	NCBI_Gene:237353,ENSEMBL:ENSMUSG00000037990	MGI:2444637	protein coding gene	SH3 domain containing ring finger 3
10	pseudogene	58.81257	58.81314	negative	MGI_C57BL6J_3708536	Gm9987	ENSEMBL:ENSMUSG00000055958	MGI:3708536	pseudogene	predicted gene 9987
10	gene	58.96554	58.96575	positive	MGI_C57BL6J_5531054	Gm27672	ENSEMBL:ENSMUSG00000098653	MGI:5531054	miRNA gene	predicted gene, 27672
10	gene	59.14163	59.22185	negative	MGI_C57BL6J_1918110	Sept10	NCBI_Gene:103080,ENSEMBL:ENSMUSG00000019917	MGI:1918110	protein coding gene	septin 10
10	gene	59.19570	59.19582	positive	MGI_C57BL6J_5453000	Gm23223	ENSEMBL:ENSMUSG00000088744	MGI:5453000	snoRNA gene	predicted gene, 23223
10	gene	59.22192	59.22643	positive	MGI_C57BL6J_3606051	Sowahc	NCBI_Gene:268301,ENSEMBL:ENSMUSG00000098188	MGI:3606051	protein coding gene	sosondowah ankyrin repeat domain family member C
10	gene	59.24360	59.25686	positive	MGI_C57BL6J_5595416	Gm36257	NCBI_Gene:102640108	MGI:5595416	lncRNA gene	predicted gene, 36257
10	gene	59.25332	59.26189	negative	MGI_C57BL6J_5623554	Gm40669	NCBI_Gene:105245181	MGI:5623554	lncRNA gene	predicted gene, 40669
10	gene	59.26717	59.27754	positive	MGI_C57BL6J_5623555	Gm40670	NCBI_Gene:105245182	MGI:5623555	lncRNA gene	predicted gene, 40670
10	gene	59.32325	59.37330	positive	MGI_C57BL6J_97463	P4ha1	NCBI_Gene:18451,ENSEMBL:ENSMUSG00000019916	MGI:97463	protein coding gene	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
10	pseudogene	59.39562	59.39676	positive	MGI_C57BL6J_3704362	Gm10273	NCBI_Gene:100039174,ENSEMBL:ENSMUSG00000069622	MGI:3704362	pseudogene	predicted pseudogene 10273
10	gene	59.40342	59.42198	positive	MGI_C57BL6J_1917086	Pla2g12b	NCBI_Gene:69836,ENSEMBL:ENSMUSG00000009646	MGI:1917086	protein coding gene	phospholipase A2, group XIIB
10	gene	59.42296	59.44178	negative	MGI_C57BL6J_1201782	Oit3	NCBI_Gene:18302,ENSEMBL:ENSMUSG00000009654	MGI:1201782	protein coding gene	oncoprotein induced transcript 3
10	gene	59.44175	59.44389	positive	MGI_C57BL6J_5595477	Gm36318	NCBI_Gene:102640190	MGI:5595477	lncRNA gene	predicted gene, 36318
10	gene	59.44698	59.61669	negative	MGI_C57BL6J_3026965	Mcu	NCBI_Gene:215999,ENSEMBL:ENSMUSG00000009647	MGI:3026965	protein coding gene	mitochondrial calcium uniporter
10	gene	59.51680	59.51768	negative	MGI_C57BL6J_1917561	2510042O18Rik	NA	NA	unclassified gene	RIKEN cDNA 2510042O18 gene
10	gene	59.57579	59.58241	positive	MGI_C57BL6J_5623556	Gm40671	NCBI_Gene:105245183	MGI:5623556	lncRNA gene	predicted gene, 40671
10	gene	59.61606	59.61742	positive	MGI_C57BL6J_3704363	Gm10322	ENSEMBL:ENSMUSG00000071280	MGI:3704363	protein coding gene	predicted gene 10322
10	gene	59.66455	59.68723	negative	MGI_C57BL6J_5623557	Gm40672	NCBI_Gene:105245184	MGI:5623557	lncRNA gene	predicted gene, 40672
10	gene	59.70248	59.86413	positive	MGI_C57BL6J_2384909	Micu1	NCBI_Gene:216001,ENSEMBL:ENSMUSG00000020111	MGI:2384909	protein coding gene	mitochondrial calcium uptake 1
10	pseudogene	59.70879	59.70904	positive	MGI_C57BL6J_4937975	Gm17148	ENSEMBL:ENSMUSG00000090350	MGI:4937975	pseudogene	predicted gene 17148
10	gene	59.79920	59.80569	negative	MGI_C57BL6J_4937886	Gm17059	NCBI_Gene:102640356,ENSEMBL:ENSMUSG00000091184	MGI:4937886	lncRNA gene	predicted gene 17059
10	pseudogene	59.80641	59.80774	positive	MGI_C57BL6J_3647495	Gm7399	NCBI_Gene:664907,ENSEMBL:ENSMUSG00000091941	MGI:3647495	pseudogene	predicted gene 7399
10	gene	59.81767	59.81780	negative	MGI_C57BL6J_5453580	Gm23803	ENSEMBL:ENSMUSG00000094824	MGI:5453580	snoRNA gene	predicted gene, 23803
10	pseudogene	59.87118	59.87170	negative	MGI_C57BL6J_3644069	Gm7413	NCBI_Gene:664936,ENSEMBL:ENSMUSG00000112673	MGI:3644069	pseudogene	predicted gene 7413
10	gene	59.87956	59.89930	positive	MGI_C57BL6J_1931881	Dnajb12	NCBI_Gene:56709,ENSEMBL:ENSMUSG00000020109	MGI:1931881	protein coding gene	DnaJ heat shock protein family (Hsp40) member B12
10	gene	59.89388	59.89776	negative	MGI_C57BL6J_5825863	Gm46226	NCBI_Gene:108167812	MGI:5825863	lncRNA gene	predicted gene, 46226
10	gene	59.90944	59.92260	positive	MGI_C57BL6J_5623558	Gm40673	NCBI_Gene:105245185	MGI:5623558	lncRNA gene	predicted gene, 40673
10	gene	59.94967	59.95183	negative	MGI_C57BL6J_1921997	Ddit4	NCBI_Gene:74747,ENSEMBL:ENSMUSG00000020108	MGI:1921997	protein coding gene	DNA-damage-inducible transcript 4
10	gene	59.98741	60.00314	negative	MGI_C57BL6J_1289325	Anapc16	NCBI_Gene:52717,ENSEMBL:ENSMUSG00000020107	MGI:1289325	protein coding gene	anaphase promoting complex subunit 16
10	gene	60.00248	60.09999	positive	MGI_C57BL6J_1916340	Ascc1	NCBI_Gene:69090,ENSEMBL:ENSMUSG00000044475	MGI:1916340	protein coding gene	activating signal cointegrator 1 complex subunit 1
10	gene	60.10622	60.13520	positive	MGI_C57BL6J_1891351	Spock2	NCBI_Gene:94214,ENSEMBL:ENSMUSG00000058297	MGI:1891351	protein coding gene	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
10	gene	60.12678	60.12683	positive	MGI_C57BL6J_5562725	Mir6906	miRBase:MI0022753,NCBI_Gene:102465546,ENSEMBL:ENSMUSG00000105468	MGI:5562725	miRNA gene	microRNA 6906
10	gene	60.18153	60.22109	negative	MGI_C57BL6J_1858224	Chst3	NCBI_Gene:53374,ENSEMBL:ENSMUSG00000057337	MGI:1858224	protein coding gene	carbohydrate sulfotransferase 3
10	gene	60.21119	60.21125	negative	MGI_C57BL6J_5451894	Gm22117	ENSEMBL:ENSMUSG00000077090	MGI:5451894	miRNA gene	predicted gene, 22117
10	pseudogene	60.22799	60.22886	negative	MGI_C57BL6J_3780207	Gm2038	NCBI_Gene:100039080	MGI:3780207	pseudogene	predicted gene 2038
10	gene	60.27763	60.30260	positive	MGI_C57BL6J_97783	Psap	NCBI_Gene:19156,ENSEMBL:ENSMUSG00000004207	MGI:97783	protein coding gene	prosaposin
10	gene	60.30275	60.69651	negative	MGI_C57BL6J_1890219	Cdh23	NCBI_Gene:22295,ENSEMBL:ENSMUSG00000012819	MGI:1890219	protein coding gene	cadherin 23 (otocadherin)
10	gene	60.34685	60.43029	positive	MGI_C57BL6J_1921298	Vsir	NCBI_Gene:74048,ENSEMBL:ENSMUSG00000020101	MGI:1921298	protein coding gene	V-set immunoregulatory receptor
10	gene	60.39935	60.40356	positive	MGI_C57BL6J_4937089	Gm17455	NCBI_Gene:100302688,ENSEMBL:ENSMUSG00000090439	MGI:4937089	protein coding gene	predicted gene, 17455
10	gene	60.71207	60.75285	negative	MGI_C57BL6J_1918529	Slc29a3	NCBI_Gene:71279,ENSEMBL:ENSMUSG00000020100	MGI:1918529	protein coding gene	solute carrier family 29 (nucleoside transporters), member 3
10	gene	60.76259	60.83160	negative	MGI_C57BL6J_894703	Unc5b	NCBI_Gene:107449,ENSEMBL:ENSMUSG00000020099	MGI:894703	protein coding gene	unc-5 netrin receptor B
10	gene	60.80866	60.81432	negative	MGI_C57BL6J_5012157	Gm19972	ENSEMBL:ENSMUSG00000112592	MGI:5012157	unclassified non-coding RNA gene	predicted gene, 19972
10	gene	60.88861	60.89049	positive	MGI_C57BL6J_5595909	Gm36750	NCBI_Gene:102640758	MGI:5595909	lncRNA gene	predicted gene, 36750
10	gene	60.92302	60.92311	positive	MGI_C57BL6J_5530833	Mir6408	miRBase:MI0021945,NCBI_Gene:102466158,ENSEMBL:ENSMUSG00000099279	MGI:5530833	miRNA gene	microRNA 6408
10	gene	60.92734	60.92833	positive	MGI_C57BL6J_5825864	Gm46227	NCBI_Gene:108167813	MGI:5825864	lncRNA gene	predicted gene, 46227
10	gene	60.92823	60.93813	negative	MGI_C57BL6J_1920866	Pldi	NCBI_Gene:73616,ENSEMBL:ENSMUSG00000037247	MGI:1920866	lncRNA gene	polymorphic derived intron containing
10	gene	60.93199	60.94094	positive	MGI_C57BL6J_5504062	Gm26947	NCBI_Gene:102640832,ENSEMBL:ENSMUSG00000098055	MGI:5504062	lncRNA gene	predicted gene, 26947
10	gene	60.96072	60.96084	positive	MGI_C57BL6J_3783376	Mir466j	miRBase:MI0006295,NCBI_Gene:100316671,ENSEMBL:ENSMUSG00000080526	MGI:3783376	miRNA gene	microRNA 466j
10	gene	61.03130	61.03808	positive	MGI_C57BL6J_5313058	Gm20611	NCBI_Gene:327760,ENSEMBL:ENSMUSG00000093568	MGI:5313058	lncRNA gene	predicted gene 20611
10	gene	61.03823	61.04281	negative	MGI_C57BL6J_5313072	Gm20625	ENSEMBL:ENSMUSG00000093489	MGI:5313072	lncRNA gene	predicted gene 20625
10	gene	61.04642	61.05190	negative	MGI_C57BL6J_5313057	Gm20610	ENSEMBL:ENSMUSG00000093573	MGI:5313057	lncRNA gene	predicted gene 20610
10	gene	61.08933	61.09433	positive	MGI_C57BL6J_94873	Pcbd1	NCBI_Gene:13180,ENSEMBL:ENSMUSG00000020098	MGI:94873	protein coding gene	pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1
10	gene	61.09864	61.14770	negative	MGI_C57BL6J_1261415	Sgpl1	NCBI_Gene:20397,ENSEMBL:ENSMUSG00000020097	MGI:1261415	protein coding gene	sphingosine phosphate lyase 1
10	gene	61.12514	61.12524	negative	MGI_C57BL6J_5690700	Gm44308	ENSEMBL:ENSMUSG00000104762	MGI:5690700	miRNA gene	predicted gene, 44308
10	gene	61.17195	61.18884	positive	MGI_C57BL6J_1923820	Tbata	NCBI_Gene:65971,ENSEMBL:ENSMUSG00000020096	MGI:1923820	protein coding gene	thymus, brain and testes associated
10	gene	61.19711	61.27344	negative	MGI_C57BL6J_2179942	Adamts14	NCBI_Gene:237360,ENSEMBL:ENSMUSG00000059901	MGI:2179942	protein coding gene	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14
10	gene	61.21595	61.21957	positive	MGI_C57BL6J_5589020	Gm29861	NCBI_Gene:102631552	MGI:5589020	lncRNA gene	predicted gene, 29861
10	gene	61.29755	61.30468	positive	MGI_C57BL6J_97551	Prf1	NCBI_Gene:18646,ENSEMBL:ENSMUSG00000037202	MGI:97551	protein coding gene	perforin 1 (pore forming protein)
10	pseudogene	61.30981	61.31032	positive	MGI_C57BL6J_3645354	Rpl27a-ps1	NCBI_Gene:237361,ENSEMBL:ENSMUSG00000061488	MGI:3645354	pseudogene	ribosomal protein L27A, pseudogene 1
10	gene	61.31966	61.38354	negative	MGI_C57BL6J_1351623	Pald1	NCBI_Gene:27355,ENSEMBL:ENSMUSG00000020092	MGI:1351623	protein coding gene	phosphatase domain containing, paladin 1
10	gene	61.35967	61.36141	positive	MGI_C57BL6J_6097413	Gm48077	ENSEMBL:ENSMUSG00000112256	MGI:6097413	unclassified gene	predicted gene, 48077
10	gene	61.37941	61.38105	negative	MGI_C57BL6J_6097407	Gm48074	ENSEMBL:ENSMUSG00000112875	MGI:6097407	unclassified gene	predicted gene, 48074
10	gene	61.41797	61.42534	positive	MGI_C57BL6J_97359	Nodal	NCBI_Gene:18119,ENSEMBL:ENSMUSG00000037171	MGI:97359	protein coding gene	nodal
10	gene	61.42849	61.45279	negative	MGI_C57BL6J_109198	Eif4ebp2	NCBI_Gene:13688,ENSEMBL:ENSMUSG00000020091	MGI:109198	protein coding gene	eukaryotic translation initiation factor 4E binding protein 2
10	gene	61.44094	61.44241	negative	MGI_C57BL6J_3026953	A130019P10Rik	NA	NA	unclassified gene	RIKEN cDNA A130019P10 gene
10	gene	61.44690	61.45072	negative	MGI_C57BL6J_6097426	Gm48086	ENSEMBL:ENSMUSG00000112229	MGI:6097426	lncRNA gene	predicted gene, 48086
10	gene	61.47358	61.47892	negative	MGI_C57BL6J_2445111	D830039M14Rik	NCBI_Gene:108167814,ENSEMBL:ENSMUSG00000043126	MGI:2445111	lncRNA gene	RIKEN cDNA D830039M14 gene
10	gene	61.47580	61.58279	positive	MGI_C57BL6J_2387182	Lrrc20	NCBI_Gene:216011,ENSEMBL:ENSMUSG00000037151	MGI:2387182	protein coding gene	leucine rich repeat containing 20
10	gene	61.49492	61.49629	negative	MGI_C57BL6J_6096644	Gm47595	ENSEMBL:ENSMUSG00000112080	MGI:6096644	lncRNA gene	predicted gene, 47595
10	gene	61.49660	61.49960	negative	MGI_C57BL6J_6096640	Gm47593	ENSEMBL:ENSMUSG00000112058	MGI:6096640	lncRNA gene	predicted gene, 47593
10	pseudogene	61.50965	61.51067	negative	MGI_C57BL6J_5010014	Gm17829	NCBI_Gene:100415779,ENSEMBL:ENSMUSG00000112710	MGI:5010014	pseudogene	predicted gene, 17829
10	gene	61.57091	61.57506	positive	MGI_C57BL6J_6096642	Gm47594	ENSEMBL:ENSMUSG00000112255	MGI:6096642	unclassified gene	predicted gene, 47594
10	gene	61.58539	61.61107	negative	MGI_C57BL6J_5579153	Gm28447	ENSEMBL:ENSMUSG00000101792	MGI:5579153	lncRNA gene	predicted gene 28447
10	gene	61.59124	61.59222	positive	MGI_C57BL6J_1922298	4930516E23Rik	NA	NA	unclassified gene	RIKEN cDNA 4930516E23 gene
10	gene	61.59548	61.62946	positive	MGI_C57BL6J_2685082	Npffr1	NCBI_Gene:237362,ENSEMBL:ENSMUSG00000020090	MGI:2685082	protein coding gene	neuropeptide FF receptor 1
10	gene	61.64855	61.67417	positive	MGI_C57BL6J_97831	Ppa1	NCBI_Gene:67895,ENSEMBL:ENSMUSG00000020089	MGI:97831	protein coding gene	pyrophosphatase (inorganic) 1
10	gene	61.67453	61.68029	negative	MGI_C57BL6J_1922789	1700022H01Rik	NCBI_Gene:75539,ENSEMBL:ENSMUSG00000112581	MGI:1922789	lncRNA gene	RIKEN cDNA 1700022H01 gene
10	gene	61.68030	61.69330	positive	MGI_C57BL6J_98230	Sar1a	NCBI_Gene:20224,ENSEMBL:ENSMUSG00000020088	MGI:98230	protein coding gene	secretion associated Ras related GTPase 1A
10	gene	61.69550	61.70277	positive	MGI_C57BL6J_1919017	Tysnd1	NCBI_Gene:71767,ENSEMBL:ENSMUSG00000020087	MGI:1919017	protein coding gene	trypsin domain containing 1
10	gene	61.71526	61.73926	positive	MGI_C57BL6J_1918611	Aifm2	NCBI_Gene:71361,ENSEMBL:ENSMUSG00000020085	MGI:1918611	protein coding gene	apoptosis-inducing factor, mitochondrion-associated 2
10	gene	61.73864	61.78415	negative	MGI_C57BL6J_3037658	Macroh2a2	NCBI_Gene:404634,ENSEMBL:ENSMUSG00000020086	MGI:3037658	protein coding gene	macroH2A.2 histone
10	gene	61.77474	61.77482	positive	MGI_C57BL6J_4950428	Mir5108	miRBase:MI0018017,NCBI_Gene:100628583,ENSEMBL:ENSMUSG00000093017	MGI:4950428	miRNA gene	microRNA 5108
10	gene	61.78203	61.78455	positive	MGI_C57BL6J_3780306	Gm2137	NCBI_Gene:100039284	MGI:3780306	protein coding gene	predicted gene 2137
10	gene	61.83823	61.97921	negative	MGI_C57BL6J_1277201	Col13a1	NCBI_Gene:12817,ENSEMBL:ENSMUSG00000058806	MGI:1277201	protein coding gene	collagen, type XIII, alpha 1
10	gene	61.84449	61.87424	positive	MGI_C57BL6J_5623559	Gm40674	NCBI_Gene:105245187	MGI:5623559	lncRNA gene	predicted gene, 40674
10	gene	61.91610	61.93258	positive	MGI_C57BL6J_5589280	Gm30121	NCBI_Gene:102631904	MGI:5589280	lncRNA gene	predicted gene, 30121
10	gene	61.93154	61.93232	negative	MGI_C57BL6J_1924418	8030450C14Rik	NA	NA	unclassified gene	RIKEN cDNA 8030450C14 gene
10	pseudogene	61.95961	61.96046	positive	MGI_C57BL6J_3644575	Gm5750	NCBI_Gene:436164,ENSEMBL:ENSMUSG00000112574	MGI:3644575	pseudogene	predicted gene 5750
10	gene	62.02340	62.02562	positive	MGI_C57BL6J_6097172	Gm47919	ENSEMBL:ENSMUSG00000112018	MGI:6097172	unclassified gene	predicted gene, 47919
10	pseudogene	62.07102	62.07257	positive	MGI_C57BL6J_3643173	Gm5424	NCBI_Gene:432466,ENSEMBL:ENSMUSG00000046687	MGI:3643173	pseudogene	predicted gene 5424
10	gene	62.10766	62.14392	negative	MGI_C57BL6J_1917144	Fam241b	NCBI_Gene:69894,ENSEMBL:ENSMUSG00000020083	MGI:1917144	protein coding gene	family with sequence similarity 241, member B
10	gene	62.13309	62.13476	positive	MGI_C57BL6J_893591	Neurog3	NCBI_Gene:11925,ENSEMBL:ENSMUSG00000044312	MGI:893591	protein coding gene	neurogenin 3
10	gene	62.18540	62.23128	negative	MGI_C57BL6J_1917673	Tspan15	NCBI_Gene:70423,ENSEMBL:ENSMUSG00000037031	MGI:1917673	protein coding gene	tetraspanin 15
10	gene	62.19417	62.19423	negative	MGI_C57BL6J_5531258	Mir7662	miRBase:MI0025002,NCBI_Gene:102465767,ENSEMBL:ENSMUSG00000099185	MGI:5531258	miRNA gene	microRNA 7662
10	gene	62.25244	62.26599	positive	MGI_C57BL6J_98477	Tacr2	NCBI_Gene:21337,ENSEMBL:ENSMUSG00000020081	MGI:98477	protein coding gene	tachykinin receptor 2
10	gene	62.26886	62.37992	negative	MGI_C57BL6J_96103	Hk1	NCBI_Gene:15275,ENSEMBL:ENSMUSG00000037012	MGI:96103	protein coding gene	hexokinase 1
10	gene	62.34026	62.36337	positive	MGI_C57BL6J_1917412	Hk1os	NCBI_Gene:70162,ENSEMBL:ENSMUSG00000085347	MGI:1917412	antisense lncRNA gene	hexokinase 1, opposite strand
10	gene	62.36234	62.36361	positive	MGI_C57BL6J_5623560	Gm40675	NCBI_Gene:105245188	MGI:5623560	lncRNA gene	predicted gene, 40675
10	gene	62.38314	62.42249	negative	MGI_C57BL6J_2384910	Hkdc1	NCBI_Gene:216019,ENSEMBL:ENSMUSG00000020080	MGI:2384910	protein coding gene	hexokinase domain containing 1
10	gene	62.42251	62.43001	positive	MGI_C57BL6J_5589481	Gm30322	NCBI_Gene:102632178	MGI:5589481	lncRNA gene	predicted gene, 30322
10	gene	62.42921	62.45130	negative	MGI_C57BL6J_2441711	Supv3l1	NCBI_Gene:338359,ENSEMBL:ENSMUSG00000020079	MGI:2441711	protein coding gene	suppressor of var1, 3-like 1 (S. cerevisiae)
10	gene	62.44916	62.45135	positive	MGI_C57BL6J_1921956	4930507D05Rik	NCBI_Gene:74706,ENSEMBL:ENSMUSG00000097129	MGI:1921956	lncRNA gene	RIKEN cDNA 4930507D05 gene
10	gene	62.45484	62.48680	negative	MGI_C57BL6J_1353654	Vps26a	NCBI_Gene:30930,ENSEMBL:ENSMUSG00000020078	MGI:1353654	protein coding gene	VPS26 retromer complex component A
10	gene	62.49383	62.52919	negative	MGI_C57BL6J_97756	Srgn	NCBI_Gene:19073,ENSEMBL:ENSMUSG00000020077	MGI:97756	protein coding gene	serglycin
10	gene	62.53863	62.57846	negative	MGI_C57BL6J_1919570	Kif1bp	NCBI_Gene:72320,ENSEMBL:ENSMUSG00000036955	MGI:1919570	protein coding gene	KIF1 binding protein
10	gene	62.57769	62.57907	positive	MGI_C57BL6J_1918479	4933428P19Rik	ENSEMBL:ENSMUSG00000105203	MGI:1918479	lncRNA gene	RIKEN cDNA 4933428P19 gene
10	gene	62.58025	62.60232	negative	MGI_C57BL6J_1860494	Ddx21	NCBI_Gene:56200,ENSEMBL:ENSMUSG00000020075	MGI:1860494	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
10	gene	62.60235	62.60413	positive	MGI_C57BL6J_6096087	Gm47257	ENSEMBL:ENSMUSG00000112347	MGI:6096087	lncRNA gene	predicted gene, 47257
10	gene	62.61590	62.65160	negative	MGI_C57BL6J_2182303	Ddx50	NCBI_Gene:94213,ENSEMBL:ENSMUSG00000020076	MGI:2182303	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
10	gene	62.65904	62.72613	negative	MGI_C57BL6J_2684909	Stox1	NCBI_Gene:216021,ENSEMBL:ENSMUSG00000036923	MGI:2684909	protein coding gene	storkhead box 1
10	pseudogene	62.66969	62.67024	positive	MGI_C57BL6J_5010699	Gm18514	NCBI_Gene:100417298,ENSEMBL:ENSMUSG00000112901	MGI:5010699	pseudogene	predicted gene, 18514
10	gene	62.68251	62.68256	positive	MGI_C57BL6J_5562726	Mir7215	miRBase:MI0023710,NCBI_Gene:102465987,ENSEMBL:ENSMUSG00000105329	MGI:5562726	miRNA gene	microRNA 7215
10	pseudogene	62.70220	62.70260	positive	MGI_C57BL6J_6096095	Gm47261	ENSEMBL:ENSMUSG00000112378	MGI:6096095	pseudogene	predicted gene, 47261
10	gene	62.74393	62.79237	negative	MGI_C57BL6J_1914750	Ccar1	NCBI_Gene:67500,ENSEMBL:ENSMUSG00000020074	MGI:1914750	protein coding gene	cell division cycle and apoptosis regulator 1
10	pseudogene	62.76175	62.76208	positive	MGI_C57BL6J_6097512	Gm48145	ENSEMBL:ENSMUSG00000112173	MGI:6097512	pseudogene	predicted gene, 48145
10	gene	62.76558	62.76564	negative	MGI_C57BL6J_3819569	Snord98	NCBI_Gene:100217463,ENSEMBL:ENSMUSG00000080469	MGI:3819569	snoRNA gene	small nucleolar RNA, C/D box 98
10	gene	62.78176	62.78319	negative	MGI_C57BL6J_6097513	Gm48146	ENSEMBL:ENSMUSG00000112806	MGI:6097513	unclassified gene	predicted gene, 48146
10	gene	62.80457	62.90900	negative	MGI_C57BL6J_1098693	Tet1	NCBI_Gene:52463,ENSEMBL:ENSMUSG00000047146	MGI:1098693	protein coding gene	tet methylcytosine dioxygenase 1
10	gene	62.85812	62.85999	negative	MGI_C57BL6J_6097818	Gm48353	ENSEMBL:ENSMUSG00000112309	MGI:6097818	unclassified gene	predicted gene, 48353
10	gene	62.89341	62.89351	negative	MGI_C57BL6J_5456256	Gm26479	ENSEMBL:ENSMUSG00000084569	MGI:5456256	snRNA gene	predicted gene, 26479
10	gene	62.91956	62.91984	positive	MGI_C57BL6J_5452580	Gm22803	ENSEMBL:ENSMUSG00000088674	MGI:5452580	unclassified non-coding RNA gene	predicted gene, 22803
10	gene	62.92063	62.94650	positive	MGI_C57BL6J_1920382	Slc25a16	NCBI_Gene:73132,ENSEMBL:ENSMUSG00000071253	MGI:1920382	protein coding gene	solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
10	gene	62.92340	62.92352	negative	MGI_C57BL6J_5455639	Gm25862	ENSEMBL:ENSMUSG00000088875	MGI:5455639	snoRNA gene	predicted gene, 25862
10	pseudogene	62.93570	62.93632	positive	MGI_C57BL6J_3801948	Gm16128	NCBI_Gene:100416328,ENSEMBL:ENSMUSG00000080971	MGI:3801948	pseudogene	predicted gene 16128
10	gene	62.94698	62.97419	positive	MGI_C57BL6J_2443732	Dna2	NCBI_Gene:327762,ENSEMBL:ENSMUSG00000036875	MGI:2443732	protein coding gene	DNA replication helicase/nuclease 2
10	gene	62.98022	63.01874	positive	MGI_C57BL6J_1917682	Rufy2	NCBI_Gene:70432,ENSEMBL:ENSMUSG00000020070	MGI:1917682	protein coding gene	RUN and FYVE domain-containing 2
10	gene	62.99878	62.99969	positive	MGI_C57BL6J_3802138	Gm16135	ENSEMBL:ENSMUSG00000084985	MGI:3802138	lncRNA gene	predicted gene 16135
10	gene	63.01466	63.02422	negative	MGI_C57BL6J_1926462	Hnrnph3	NCBI_Gene:432467,ENSEMBL:ENSMUSG00000020069	MGI:1926462	protein coding gene	heterogeneous nuclear ribonucleoprotein H3
10	gene	63.02405	63.05881	positive	MGI_C57BL6J_1914557	Pbld2	NCBI_Gene:67307,ENSEMBL:ENSMUSG00000020072	MGI:1914557	protein coding gene	phenazine biosynthesis-like protein domain containing 2
10	gene	63.05560	63.05747	negative	MGI_C57BL6J_3801780	Gm16143	NCBI_Gene:102632251,ENSEMBL:ENSMUSG00000087030	MGI:3801780	lncRNA gene	predicted gene 16143
10	gene	63.06016	63.07796	positive	MGI_C57BL6J_1915621	Pbld1	NCBI_Gene:68371,ENSEMBL:ENSMUSG00000112129	MGI:1915621	protein coding gene	phenazine biosynthesis-like protein domain containing 1
10	gene	63.07205	63.07506	negative	MGI_C57BL6J_6097403	Gm48072	ENSEMBL:ENSMUSG00000112374	MGI:6097403	lncRNA gene	predicted gene, 48072
10	gene	63.09802	63.10128	positive	MGI_C57BL6J_1355553	Atoh7	NCBI_Gene:53404,ENSEMBL:ENSMUSG00000036816	MGI:1355553	protein coding gene	atonal bHLH transcription factor 7
10	gene	63.09835	63.09869	positive	MGI_C57BL6J_5611291	Gm38063	ENSEMBL:ENSMUSG00000104481	MGI:5611291	unclassified gene	predicted gene, 38063
10	gene	63.11579	63.20395	negative	MGI_C57BL6J_1916052	Mypn	NCBI_Gene:68802,ENSEMBL:ENSMUSG00000020067	MGI:1916052	protein coding gene	myopalladin
10	gene	63.24307	63.24415	negative	MGI_C57BL6J_3604190	1700120B22Rik	ENSEMBL:ENSMUSG00000045391	MGI:3604190	lncRNA gene	RIKEN cDNA 1700120B22 gene
10	gene	63.24378	63.31788	positive	MGI_C57BL6J_1914595	Herc4	NCBI_Gene:67345,ENSEMBL:ENSMUSG00000020064	MGI:1914595	protein coding gene	hect domain and RLD 4
10	gene	63.25093	63.25252	positive	MGI_C57BL6J_5011522	Gm19337	ENSEMBL:ENSMUSG00000112411	MGI:5011522	unclassified gene	predicted gene, 19337
10	gene	63.27009	63.27087	positive	MGI_C57BL6J_6096677	Gm47615	ENSEMBL:ENSMUSG00000112759	MGI:6096677	unclassified gene	predicted gene, 47615
10	gene	63.29229	63.29579	positive	MGI_C57BL6J_3026933	D230019N24Rik	NA	NA	unclassified gene	RIKEN cDNA D230019N24 gene
10	gene	63.29229	63.29579	negative	MGI_C57BL6J_5477283	Gm26789	ENSEMBL:ENSMUSG00000096991	MGI:5477283	lncRNA gene	predicted gene, 26789
10	gene	63.31900	63.38170	negative	MGI_C57BL6J_2135607	Sirt1	NCBI_Gene:93759,ENSEMBL:ENSMUSG00000020063	MGI:2135607	protein coding gene	sirtuin 1
10	gene	63.35385	63.36689	positive	MGI_C57BL6J_3802016	Gm16145	ENSEMBL:ENSMUSG00000085372	MGI:3802016	lncRNA gene	predicted gene 16145
10	gene	63.38244	63.41058	positive	MGI_C57BL6J_1353428	Dnajc12	NCBI_Gene:30045,ENSEMBL:ENSMUSG00000036764	MGI:1353428	protein coding gene	DnaJ heat shock protein family (Hsp40) member C12
10	pseudogene	63.41300	63.41371	positive	MGI_C57BL6J_3644432	Gm7530	NCBI_Gene:665182,ENSEMBL:ENSMUSG00000112572	MGI:3644432	pseudogene	predicted gene 7530
10	gene	63.42060	63.42179	negative	MGI_C57BL6J_3646561	Gm7075	NCBI_Gene:631906,ENSEMBL:ENSMUSG00000048185	MGI:3646561	protein coding gene	predicted gene 7075
10	gene	63.42948	63.42956	negative	MGI_C57BL6J_4414046	n-TStga3	NCBI_Gene:102467600	MGI:4414046	tRNA gene	nuclear encoded tRNA serine 3 (anticodon TGA)
10	gene	63.43010	65.00367	positive	MGI_C57BL6J_2661445	Ctnna3	NCBI_Gene:216033,ENSEMBL:ENSMUSG00000060843	MGI:2661445	protein coding gene	catenin (cadherin associated protein), alpha 3
10	gene	63.80087	63.80135	positive	MGI_C57BL6J_1922804	1700020K04Rik	NA	NA	unclassified gene	RIKEN cDNA 1700020K04 gene
10	gene	63.81372	63.81822	negative	MGI_C57BL6J_5589803	Gm30644	NCBI_Gene:102632617	MGI:5589803	lncRNA gene	predicted gene, 30644
10	gene	63.91002	63.91566	negative	MGI_C57BL6J_2442302	B230219N15Rik	NA	NA	unclassified gene	RIKEN cDNA B230219N15 gene
10	gene	63.92487	63.92743	negative	MGI_C57BL6J_3642340	Gm10118	ENSEMBL:ENSMUSG00000062561	MGI:3642340	protein coding gene	predicted gene 10118
10	gene	63.92847	64.09028	negative	MGI_C57BL6J_2389177	Lrrtm3	NCBI_Gene:216028,ENSEMBL:ENSMUSG00000042846	MGI:2389177	protein coding gene	leucine rich repeat transmembrane neuronal 3
10	gene	64.01775	64.02096	positive	MGI_C57BL6J_2443915	D630028G08Rik	NA	NA	unclassified gene	RIKEN cDNA D630028G08 gene
10	gene	64.04358	64.04491	negative	MGI_C57BL6J_1923376	5830490A04Rik	NA	NA	unclassified gene	RIKEN cDNA 5830490A04 gene
10	gene	64.06899	64.07290	positive	MGI_C57BL6J_2443846	4931432P07Rik	NA	NA	unclassified gene	RIKEN cDNA 4931432P07 gene
10	gene	64.18133	64.18244	positive	MGI_C57BL6J_5011571	Gm19386	NA	NA	unclassified gene	predicted gene%2c 19386
10	gene	64.30464	64.30474	negative	MGI_C57BL6J_5453631	Gm23854	ENSEMBL:ENSMUSG00000089003	MGI:5453631	snRNA gene	predicted gene, 23854
10	gene	65.11953	65.12039	negative	MGI_C57BL6J_5579587	Gm28881	NCBI_Gene:102632700,ENSEMBL:ENSMUSG00000100528	MGI:5579587	lncRNA gene	predicted gene 28881
10	pseudogene	65.41675	65.41767	positive	MGI_C57BL6J_3648279	Gm7540	NCBI_Gene:665206,ENSEMBL:ENSMUSG00000112114	MGI:3648279	pseudogene	predicted gene 7540
10	pseudogene	65.53465	65.53529	positive	MGI_C57BL6J_3645895	Gm4796	NCBI_Gene:216036,ENSEMBL:ENSMUSG00000112341	MGI:3645895	pseudogene	predicted gene 4796
10	pseudogene	65.76788	65.76857	positive	MGI_C57BL6J_97144	Marcksl1-ps1	NCBI_Gene:111005	MGI:97144	pseudogene	MARCKS-like 1, pseudogene 1
10	pseudogene	65.77156	65.77220	negative	MGI_C57BL6J_5011301	Gm19116	NCBI_Gene:100418282,ENSEMBL:ENSMUSG00000112720	MGI:5011301	pseudogene	predicted gene, 19116
10	gene	65.87560	65.90825	negative	MGI_C57BL6J_5590012	Gm30853	NCBI_Gene:102632897,ENSEMBL:ENSMUSG00000112913	MGI:5590012	lncRNA gene	predicted gene, 30853
10	gene	66.12060	66.25422	negative	MGI_C57BL6J_1916683	1700023F02Rik	NCBI_Gene:69433,ENSEMBL:ENSMUSG00000100000	MGI:1916683	lncRNA gene	RIKEN cDNA 1700023F02 gene
10	gene	66.14530	66.17951	positive	MGI_C57BL6J_1924448	4930407I19Rik	NCBI_Gene:77198,ENSEMBL:ENSMUSG00000112210	MGI:1924448	lncRNA gene	RIKEN cDNA 4930407I19 gene
10	gene	66.16376	66.20046	negative	MGI_C57BL6J_5590215	Gm31056	NCBI_Gene:102633158	MGI:5590215	lncRNA gene	predicted gene, 31056
10	gene	66.17040	66.17051	negative	MGI_C57BL6J_5452606	Gm22829	ENSEMBL:ENSMUSG00000065705	MGI:5452606	snRNA gene	predicted gene, 22829
10	pseudogene	66.25381	66.25473	negative	MGI_C57BL6J_5010694	Gm18509	NCBI_Gene:100417292	MGI:5010694	pseudogene	predicted gene, 18509
10	gene	66.29328	66.51251	negative	MGI_C57BL6J_5623562	Gm40677	NCBI_Gene:105245190	MGI:5623562	lncRNA gene	predicted gene, 40677
10	gene	66.48355	66.48368	positive	MGI_C57BL6J_5452371	Gm22594	ENSEMBL:ENSMUSG00000077439	MGI:5452371	snoRNA gene	predicted gene, 22594
10	gene	66.64092	66.64186	positive	MGI_C57BL6J_5578845	Gm28139	ENSEMBL:ENSMUSG00000101338	MGI:5578845	lncRNA gene	predicted gene 28139
10	pseudogene	66.69134	66.69161	negative	MGI_C57BL6J_6097127	Gm47894	ENSEMBL:ENSMUSG00000112247	MGI:6097127	pseudogene	predicted gene, 47894
10	gene	66.69824	66.70596	positive	MGI_C57BL6J_5590340	Gm31181	ENSEMBL:ENSMUSG00000112202	MGI:5590340	lncRNA gene	predicted gene, 31181
10	pseudogene	66.74029	66.74116	negative	MGI_C57BL6J_5010962	Gm18777	NCBI_Gene:100417714,ENSEMBL:ENSMUSG00000112159	MGI:5010962	pseudogene	predicted gene, 18777
10	gene	66.74093	66.74559	negative	MGI_C57BL6J_5590399	Gm31240	NCBI_Gene:102633406	MGI:5590399	lncRNA gene	predicted gene, 31240
10	gene	66.75945	66.76210	positive	MGI_C57BL6J_6097128	Gm47895	ENSEMBL:ENSMUSG00000112383	MGI:6097128	lncRNA gene	predicted gene, 47895
10	gene	66.80395	66.82967	negative	MGI_C57BL6J_5623563	Gm40678	NCBI_Gene:105245191	MGI:5623563	lncRNA gene	predicted gene, 40678
10	gene	66.80984	66.82235	positive	MGI_C57BL6J_6097130	Gm47896	ENSEMBL:ENSMUSG00000112425	MGI:6097130	lncRNA gene	predicted gene, 47896
10	gene	66.82417	66.82740	positive	MGI_C57BL6J_6097132	Gm47897	ENSEMBL:ENSMUSG00000112514	MGI:6097132	lncRNA gene	predicted gene, 47897
10	gene	66.83214	66.91156	negative	MGI_C57BL6J_5590575	Gm31416	NCBI_Gene:102633633	MGI:5590575	lncRNA gene	predicted gene, 31416
10	gene	66.83760	66.83950	positive	MGI_C57BL6J_6097137	Gm47900	ENSEMBL:ENSMUSG00000112379	MGI:6097137	lncRNA gene	predicted gene, 47900
10	gene	66.88967	66.89161	negative	MGI_C57BL6J_6097142	Gm47903	ENSEMBL:ENSMUSG00000112267	MGI:6097142	lncRNA gene	predicted gene, 47903
10	gene	66.91219	66.92062	negative	MGI_C57BL6J_1915738	1110002J07Rik	NCBI_Gene:68488,ENSEMBL:ENSMUSG00000097134	MGI:1915738	lncRNA gene	RIKEN cDNA 1110002J07 gene
10	gene	66.92030	66.92360	positive	MGI_C57BL6J_5477070	Gm26576	ENSEMBL:ENSMUSG00000097921	MGI:5477070	lncRNA gene	predicted gene, 26576
10	gene	67.00502	67.04133	positive	MGI_C57BL6J_5590922	Gm31763	NCBI_Gene:102634101,ENSEMBL:ENSMUSG00000112925	MGI:5590922	lncRNA gene	predicted gene, 31763
10	gene	67.00919	67.09699	negative	MGI_C57BL6J_88930	Reep3	NCBI_Gene:28193,ENSEMBL:ENSMUSG00000019873	MGI:88930	protein coding gene	receptor accessory protein 3
10	gene	67.09613	67.25633	positive	MGI_C57BL6J_1918614	Jmjd1c	NCBI_Gene:108829,ENSEMBL:ENSMUSG00000037876	MGI:1918614	protein coding gene	jumonji domain containing 1C
10	gene	67.12053	67.12478	negative	MGI_C57BL6J_5825865	Gm46228	NCBI_Gene:108167815	MGI:5825865	lncRNA gene	predicted gene, 46228
10	gene	67.17778	67.18395	positive	MGI_C57BL6J_2443021	A630074N13Rik	NA	NA	unclassified gene	RIKEN cDNA A630074N13 gene
10	gene	67.23586	67.23596	negative	MGI_C57BL6J_5456136	Gm26359	ENSEMBL:ENSMUSG00000089498	MGI:5456136	snRNA gene	predicted gene, 26359
10	gene	67.26669	67.28535	negative	MGI_C57BL6J_1354950	Nrbf2	NCBI_Gene:641340,ENSEMBL:ENSMUSG00000075000	MGI:1354950	protein coding gene	nuclear receptor binding factor 2
10	gene	67.28543	67.29316	positive	MGI_C57BL6J_5825837	Gm46200	NCBI_Gene:108167782	MGI:5825837	lncRNA gene	predicted gene, 46200
10	gene	67.29741	67.41893	positive	MGI_C57BL6J_6155108	Gm49454	ENSEMBL:ENSMUSG00000112314	MGI:6155108	lncRNA gene	predicted gene, 49454
10	gene	67.30440	67.31363	positive	MGI_C57BL6J_5825866	Gm46229	NCBI_Gene:108167816	MGI:5825866	lncRNA gene	predicted gene, 46229
10	pseudogene	67.34880	67.34896	negative	MGI_C57BL6J_6096511	Gm47516	ENSEMBL:ENSMUSG00000111908	MGI:6096511	pseudogene	predicted gene, 47516
10	gene	67.34998	67.39721	positive	MGI_C57BL6J_5825867	Gm46230	NCBI_Gene:108167817	MGI:5825867	lncRNA gene	predicted gene, 46230
10	gene	67.39968	67.41929	positive	MGI_C57BL6J_5591121	Gm31962	NCBI_Gene:102634362	MGI:5591121	lncRNA gene	predicted gene, 31962
10	gene	67.42005	67.42533	positive	MGI_C57BL6J_5591182	Gm32023	NCBI_Gene:102634442,ENSEMBL:ENSMUSG00000112848	MGI:5591182	lncRNA gene	predicted gene, 32023
10	gene	67.43609	67.44343	negative	MGI_C57BL6J_6096535	Gm47531	ENSEMBL:ENSMUSG00000112726	MGI:6096535	lncRNA gene	predicted gene, 47531
10	gene	67.48439	67.48605	negative	MGI_C57BL6J_1923024	4930403L11Rik	NA	NA	unclassified gene	RIKEN cDNA 4930403L11 gene
10	gene	67.49636	67.53534	negative	MGI_C57BL6J_5591414	Gm32255	NCBI_Gene:102634748,ENSEMBL:ENSMUSG00000112120	MGI:5591414	lncRNA gene	predicted gene, 32255
10	gene	67.50114	67.50314	negative	MGI_C57BL6J_5623564	Gm40679	NCBI_Gene:105245192	MGI:5623564	lncRNA gene	predicted gene, 40679
10	gene	67.50912	67.51154	positive	MGI_C57BL6J_5591335	Gm32176	NCBI_Gene:102634639	MGI:5591335	lncRNA gene	predicted gene, 32176
10	gene	67.53445	67.54749	positive	MGI_C57BL6J_95296	Egr2	NCBI_Gene:13654,ENSEMBL:ENSMUSG00000037868	MGI:95296	protein coding gene	early growth response 2
10	gene	67.54451	67.54896	negative	MGI_C57BL6J_2685083	Ado	NCBI_Gene:211488,ENSEMBL:ENSMUSG00000057134	MGI:2685083	protein coding gene	2-aminoethanethiol (cysteamine) dioxygenase
10	gene	67.56763	67.57199	negative	MGI_C57BL6J_1922576	4930563J15Rik	NCBI_Gene:105245193,ENSEMBL:ENSMUSG00000112141	MGI:1922576	lncRNA gene	RIKEN cDNA 4930563J15 gene
10	gene	67.57028	67.59659	positive	MGI_C57BL6J_5591523	Gm32364	NCBI_Gene:102634888,ENSEMBL:ENSMUSG00000112558	MGI:5591523	lncRNA gene	predicted gene, 32364
10	gene	67.57204	67.57426	positive	MGI_C57BL6J_3642860	Gm10797	ENSEMBL:ENSMUSG00000074999	MGI:3642860	protein coding gene	predicted gene 10797
10	gene	67.66463	67.66744	positive	MGI_C57BL6J_5591674	Gm32515	NCBI_Gene:102635092,ENSEMBL:ENSMUSG00000112097	MGI:5591674	lncRNA gene	predicted gene, 32515
10	gene	67.69352	67.70392	positive	MGI_C57BL6J_5591597	Gm32438	NCBI_Gene:102634989	MGI:5591597	lncRNA gene	predicted gene, 32438
10	gene	67.70523	67.71064	positive	MGI_C57BL6J_5623565	Gm40680	NCBI_Gene:105245194	MGI:5623565	lncRNA gene	predicted gene, 40680
10	gene	67.70784	67.70947	positive	MGI_C57BL6J_6096606	Gm47574	ENSEMBL:ENSMUSG00000112396	MGI:6096606	unclassified gene	predicted gene, 47574
10	gene	67.70859	67.71804	negative	MGI_C57BL6J_1916765	1700030E10Rik	ENSEMBL:ENSMUSG00000112619	MGI:1916765	lncRNA gene	RIKEN cDNA 1700030E10 gene
10	gene	67.74915	67.77838	negative	MGI_C57BL6J_5623566	Gm40681	NCBI_Gene:105245195	MGI:5623566	lncRNA gene	predicted gene, 40681
10	gene	67.78555	67.78883	positive	MGI_C57BL6J_1922475	4930543I11Rik	NCBI_Gene:102635169,ENSEMBL:ENSMUSG00000112537	MGI:1922475	lncRNA gene	RIKEN cDNA 4930543I11 gene
10	gene	67.78575	67.83640	positive	MGI_C57BL6J_6215275	Gm49766	ENSEMBL:ENSMUSG00000116971	MGI:6215275	lncRNA gene	predicted gene, 49766
10	pseudogene	67.79273	67.79326	negative	MGI_C57BL6J_5588933	Gm29774	NCBI_Gene:101056081,ENSEMBL:ENSMUSG00000111956	MGI:5588933	pseudogene	predicted gene, 29774
10	gene	67.88610	67.91266	negative	MGI_C57BL6J_2143676	Zfp365	NCBI_Gene:216049,ENSEMBL:ENSMUSG00000037855	MGI:2143676	protein coding gene	zinc finger protein 365
10	gene	67.96248	67.97371	negative	MGI_C57BL6J_1922317	4930521O17Rik	NCBI_Gene:75067,ENSEMBL:ENSMUSG00000112899	MGI:1922317	lncRNA gene	RIKEN cDNA 4930521O17 gene
10	gene	67.97957	68.05974	positive	MGI_C57BL6J_2158417	Rtkn2	NCBI_Gene:170799,ENSEMBL:ENSMUSG00000037846	MGI:2158417	protein coding gene	rhotekin 2
10	gene	68.02545	68.02663	negative	MGI_C57BL6J_3801951	Gm16212	ENSEMBL:ENSMUSG00000086838	MGI:3801951	lncRNA gene	predicted gene 16212
10	gene	68.09252	68.27874	negative	MGI_C57BL6J_2175912	Arid5b	NCBI_Gene:71371,ENSEMBL:ENSMUSG00000019947	MGI:2175912	protein coding gene	AT rich interactive domain 5B (MRF1-like)
10	gene	68.31301	68.32698	positive	MGI_C57BL6J_6095801	Gm47078	ENSEMBL:ENSMUSG00000112275	MGI:6095801	lncRNA gene	predicted gene, 47078
10	gene	68.31906	68.32114	negative	MGI_C57BL6J_1922398	4930545H06Rik	NCBI_Gene:75148,ENSEMBL:ENSMUSG00000112157	MGI:1922398	lncRNA gene	RIKEN cDNA 4930545H06 gene
10	gene	68.32564	68.34030	negative	MGI_C57BL6J_5591907	Gm32748	NCBI_Gene:102635395	MGI:5591907	lncRNA gene	predicted gene, 32748
10	gene	68.38659	68.43979	positive	MGI_C57BL6J_5623568	Gm40683	NCBI_Gene:105245197	MGI:5623568	lncRNA gene	predicted gene, 40683
10	gene	68.43095	68.54192	negative	MGI_C57BL6J_1920537	Cabcoco1	NCBI_Gene:73287,ENSEMBL:ENSMUSG00000019945	MGI:1920537	protein coding gene	ciliary associated calcium binding coiled-coil 1
10	gene	68.53009	68.53394	positive	MGI_C57BL6J_5592031	Gm32872	NCBI_Gene:102635578,ENSEMBL:ENSMUSG00000112793	MGI:5592031	lncRNA gene	predicted gene, 32872
10	pseudogene	68.69150	68.69237	negative	MGI_C57BL6J_3647263	Gm7594	NCBI_Gene:665342,ENSEMBL:ENSMUSG00000112434	MGI:3647263	pseudogene	predicted gene 7594
10	gene	68.72365	68.78266	positive	MGI_C57BL6J_2143537	Tmem26	NCBI_Gene:327766,ENSEMBL:ENSMUSG00000060044	MGI:2143537	protein coding gene	transmembrane protein 26
10	gene	68.79890	68.82282	negative	MGI_C57BL6J_5592090	Gm32931	NCBI_Gene:102635644	MGI:5592090	lncRNA gene	predicted gene, 32931
10	gene	68.90280	68.90450	negative	MGI_C57BL6J_1920605	1700048P04Rik	ENSEMBL:ENSMUSG00000112333	MGI:1920605	lncRNA gene	RIKEN cDNA 1700048P04 gene
10	gene	69.02026	69.04451	negative	MGI_C57BL6J_5592194	Gm33035	NCBI_Gene:102635787,ENSEMBL:ENSMUSG00000112331	MGI:5592194	lncRNA gene	predicted gene, 33035
10	gene	69.07235	69.08988	negative	MGI_C57BL6J_5592289	Gm33130	NCBI_Gene:102635915	MGI:5592289	lncRNA gene	predicted gene, 33130
10	gene	69.09666	69.09787	negative	MGI_C57BL6J_6095844	Gm47107	ENSEMBL:ENSMUSG00000112083	MGI:6095844	lncRNA gene	predicted gene, 47107
10	gene	69.11245	69.11744	positive	MGI_C57BL6J_5623569	Gm40684	NCBI_Gene:105245198	MGI:5623569	lncRNA gene	predicted gene, 40684
10	gene	69.13288	69.13300	positive	MGI_C57BL6J_5453949	Gm24172	ENSEMBL:ENSMUSG00000077315	MGI:5453949	snoRNA gene	predicted gene, 24172
10	gene	69.14775	69.15113	negative	MGI_C57BL6J_5592422	Gm33263	NCBI_Gene:102636096,ENSEMBL:ENSMUSG00000111941	MGI:5592422	lncRNA gene	predicted gene, 33263
10	gene	69.15128	69.29179	positive	MGI_C57BL6J_1916538	Rhobtb1	NCBI_Gene:69288,ENSEMBL:ENSMUSG00000019944	MGI:1916538	protein coding gene	Rho-related BTB domain containing 1
10	gene	69.20946	69.21316	negative	MGI_C57BL6J_2444562	A930033H14Rik	NCBI_Gene:320700,ENSEMBL:ENSMUSG00000090622	MGI:2444562	protein coding gene	RIKEN cDNA A930033H14 gene
10	gene	69.31204	69.31542	positive	MGI_C57BL6J_5623570	Gm40685	NCBI_Gene:105245199,ENSEMBL:ENSMUSG00000112798	MGI:5623570	lncRNA gene	predicted gene, 40685
10	pseudogene	69.32520	69.32567	positive	MGI_C57BL6J_3780816	Rpl30-ps7	NCBI_Gene:100040182	MGI:3780816	pseudogene	ribosomal protein L30, pseudogene 7
10	gene	69.32636	69.32821	negative	MGI_C57BL6J_1921141	4930423B08Rik	NCBI_Gene:102636160	MGI:1921141	lncRNA gene	RIKEN cDNA 4930423B08 gene
10	gene	69.33515	69.35294	negative	MGI_C57BL6J_88351	Cdk1	NCBI_Gene:12534,ENSEMBL:ENSMUSG00000019942	MGI:88351	protein coding gene	cyclin-dependent kinase 1
10	pseudogene	69.37269	69.37331	negative	MGI_C57BL6J_6096016	Gm47211	ENSEMBL:ENSMUSG00000112509	MGI:6096016	pseudogene	predicted gene, 47211
10	gene	69.39877	69.60214	positive	MGI_C57BL6J_3036232	4833431D13Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 4833431D13 gene
10	gene	69.39877	70.02744	positive	MGI_C57BL6J_88026	Ank3	NCBI_Gene:11735,ENSEMBL:ENSMUSG00000069601	MGI:88026	protein coding gene	ankyrin 3, epithelial
10	pseudogene	69.42268	69.42375	negative	MGI_C57BL6J_5010821	Gm18636	NCBI_Gene:100417479,ENSEMBL:ENSMUSG00000111899	MGI:5010821	pseudogene	predicted gene, 18636
10	gene	69.43900	69.43974	negative	MGI_C57BL6J_1925199	A930011B18Rik	NA	NA	unclassified gene	RIKEN cDNA A930011B18 gene
10	gene	69.54109	69.55651	negative	MGI_C57BL6J_5592623	Gm33464	NCBI_Gene:102636382	MGI:5592623	lncRNA gene	predicted gene, 33464
10	pseudogene	69.56567	69.56693	negative	MGI_C57BL6J_5825868	Gm46231	NCBI_Gene:108167818,ENSEMBL:ENSMUSG00000112729	MGI:5825868	pseudogene	predicted gene, 46231
10	gene	69.68908	69.69018	positive	MGI_C57BL6J_1924544	9430064K01Rik	NA	NA	unclassified gene	RIKEN cDNA 9430064K01 gene
10	gene	69.86268	69.86639	negative	MGI_C57BL6J_5592575	Gm33416	NCBI_Gene:102636314	MGI:5592575	lncRNA gene	predicted gene, 33416
10	gene	69.90705	69.90931	negative	MGI_C57BL6J_5592520	Gm33361	NCBI_Gene:102636238	MGI:5592520	lncRNA gene	predicted gene, 33361
10	gene	69.90718	69.90798	positive	MGI_C57BL6J_1920163	2900006A17Rik	NA	NA	unclassified gene	RIKEN cDNA 2900006A17 gene
10	gene	70.09688	70.19320	positive	MGI_C57BL6J_1923801	Ccdc6	NCBI_Gene:76551,ENSEMBL:ENSMUSG00000048701	MGI:1923801	protein coding gene	coiled-coil domain containing 6
10	gene	70.20466	70.21971	positive	MGI_C57BL6J_1916813	Mrln	NCBI_Gene:69563,ENSEMBL:ENSMUSG00000019933	MGI:1916813	protein coding gene	myoregulin
10	gene	70.24510	70.28597	positive	MGI_C57BL6J_1914109	Slc16a9	NCBI_Gene:66859,ENSEMBL:ENSMUSG00000037762	MGI:1914109	protein coding gene	solute carrier family 16 (monocarboxylic acid transporters), member 9
10	gene	70.28423	70.28495	negative	MGI_C57BL6J_3779671	Gm7097	ENSEMBL:ENSMUSG00000089835	MGI:3779671	lncRNA gene	predicted gene 7097
10	pseudogene	70.28555	70.28818	negative	MGI_C57BL6J_3708538	Gm9877	ENSEMBL:ENSMUSG00000052426	MGI:3708538	pseudogene	predicted gene 9877
10	gene	70.28977	70.30845	positive	MGI_C57BL6J_5623572	Gm40687	NCBI_Gene:105245201	MGI:5623572	lncRNA gene	predicted gene, 40687
10	gene	70.29340	70.29406	positive	MGI_C57BL6J_5592863	Gm33704	NCBI_Gene:102636706	MGI:5592863	lncRNA gene	predicted gene, 33704
10	pseudogene	70.33830	70.33847	positive	MGI_C57BL6J_5012293	Gm20108	NCBI_Gene:102636776,ENSEMBL:ENSMUSG00000112676	MGI:5012293	pseudogene	predicted gene, 20108
10	gene	70.41246	70.41558	negative	MGI_C57BL6J_6097213	Gm47946	ENSEMBL:ENSMUSG00000112884	MGI:6097213	lncRNA gene	predicted gene, 47946
10	gene	70.44008	70.55874	positive	MGI_C57BL6J_1918971	Fam13c	NCBI_Gene:71721,ENSEMBL:ENSMUSG00000043259	MGI:1918971	protein coding gene	family with sequence similarity 13, member C
10	gene	70.50119	70.50150	negative	MGI_C57BL6J_5452097	Gm22320	ENSEMBL:ENSMUSG00000087774	MGI:5452097	unclassified non-coding RNA gene	predicted gene, 22320
10	pseudogene	70.50477	70.50734	negative	MGI_C57BL6J_5588942	Gm29783	NCBI_Gene:101056119,ENSEMBL:ENSMUSG00000112273	MGI:5588942	pseudogene	predicted gene, 29783
10	gene	70.55768	70.65596	negative	MGI_C57BL6J_1918161	Phyhipl	NCBI_Gene:70911,ENSEMBL:ENSMUSG00000037747	MGI:1918161	protein coding gene	phytanoyl-CoA hydroxylase interacting protein-like
10	gene	70.59978	70.68021	positive	MGI_C57BL6J_5825869	Gm46232	NCBI_Gene:108167819	MGI:5825869	lncRNA gene	predicted gene, 46232
10	gene	70.59983	70.60048	positive	MGI_C57BL6J_2143903	BB187676	NA	NA	unclassified gene	expressed sequence BB187676
10	gene	70.60105	70.65596	negative	MGI_C57BL6J_2442462	D630013N20Rik	NCBI_Gene:319646	MGI:2442462	lncRNA gene	RIKEN cDNA D630013N20 gene
10	gene	70.62673	70.63526	positive	MGI_C57BL6J_5623573	Gm40688	NCBI_Gene:105245202	MGI:5623573	lncRNA gene	predicted gene, 40688
10	gene	70.71493	70.74045	negative	MGI_C57BL6J_5593138	Gm33979	NCBI_Gene:102637077,ENSEMBL:ENSMUSG00000112607	MGI:5593138	lncRNA gene	predicted gene, 33979
10	gene	70.80724	70.81382	positive	MGI_C57BL6J_6097330	Gm48021	ENSEMBL:ENSMUSG00000112752	MGI:6097330	lncRNA gene	predicted gene, 48021
10	gene	70.81385	70.81605	positive	MGI_C57BL6J_6097332	Gm48022	ENSEMBL:ENSMUSG00000112320	MGI:6097332	lncRNA gene	predicted gene, 48022
10	gene	70.83075	70.84294	positive	MGI_C57BL6J_5623574	Gm40689	NCBI_Gene:105245203,ENSEMBL:ENSMUSG00000112870	MGI:5623574	lncRNA gene	predicted gene, 40689
10	gene	70.84702	70.85373	positive	MGI_C57BL6J_6097334	Gm48023	ENSEMBL:ENSMUSG00000112883	MGI:6097334	lncRNA gene	predicted gene, 48023
10	gene	70.86340	70.86845	negative	MGI_C57BL6J_6097336	Gm48024	ENSEMBL:ENSMUSG00000112125	MGI:6097336	lncRNA gene	predicted gene, 48024
10	gene	70.86862	70.93432	positive	MGI_C57BL6J_1922439	4930533K18Rik	NCBI_Gene:75189,ENSEMBL:ENSMUSG00000047692	MGI:1922439	lncRNA gene	RIKEN cDNA 4930533K18 gene
10	gene	70.87000	70.87242	negative	MGI_C57BL6J_6097351	Gm48036	ENSEMBL:ENSMUSG00000112032	MGI:6097351	lncRNA gene	predicted gene, 48036
10	gene	70.88210	70.88221	positive	MGI_C57BL6J_5454263	Gm24486	ENSEMBL:ENSMUSG00000094703	MGI:5454263	snRNA gene	predicted gene, 24486
10	gene	70.92283	71.15970	negative	MGI_C57BL6J_1933388	Bicc1	NCBI_Gene:83675,ENSEMBL:ENSMUSG00000014329	MGI:1933388	protein coding gene	BicC family RNA binding protein 1
10	gene	70.97551	70.99304	negative	MGI_C57BL6J_6097338	Gm48025	ENSEMBL:ENSMUSG00000112745	MGI:6097338	lncRNA gene	predicted gene, 48025
10	gene	71.08288	71.08365	positive	MGI_C57BL6J_3783091	Gm15647	ENSEMBL:ENSMUSG00000090212	MGI:3783091	lncRNA gene	predicted gene 15647
10	gene	71.12566	71.14157	positive	MGI_C57BL6J_5593296	Gm34137	NCBI_Gene:102637280	MGI:5593296	lncRNA gene	predicted gene, 34137
10	pseudogene	71.14816	71.14981	positive	MGI_C57BL6J_5591184	Gm32025	NCBI_Gene:102634444,ENSEMBL:ENSMUSG00000112566	MGI:5591184	pseudogene	predicted gene, 32025
10	pseudogene	71.16291	71.16338	positive	MGI_C57BL6J_3643973	Gm6331	NCBI_Gene:622551,ENSEMBL:ENSMUSG00000112748	MGI:3643973	pseudogene	predicted gene 6331
10	gene	71.16874	71.18205	negative	MGI_C57BL6J_2442303	C730027H18Rik	NCBI_Gene:319572,ENSEMBL:ENSMUSG00000112189,ENSEMBL:ENSMUSG00000112366	MGI:2442303	lncRNA gene	RIKEN cDNA C730027H18 gene
10	gene	71.18104	71.20449	positive	MGI_C57BL6J_1925888	1700113B09Rik	NCBI_Gene:78638,ENSEMBL:ENSMUSG00000112028	MGI:1925888	lncRNA gene	RIKEN cDNA 1700113B09 gene
10	gene	71.18117	71.20114	positive	MGI_C57BL6J_5593487	Gm34328	NCBI_Gene:102637547	MGI:5593487	lncRNA gene	predicted gene, 34328
10	gene	71.22546	71.23833	negative	MGI_C57BL6J_107810	Tfam	NCBI_Gene:21780,ENSEMBL:ENSMUSG00000003923	MGI:107810	protein coding gene	transcription factor A, mitochondrial
10	gene	71.25498	71.28526	negative	MGI_C57BL6J_2384911	Ube2d1	NCBI_Gene:216080,ENSEMBL:ENSMUSG00000019927	MGI:2384911	protein coding gene	ubiquitin-conjugating enzyme E2D 1
10	gene	71.28773	71.29248	positive	MGI_C57BL6J_5593535	Gm34376	NCBI_Gene:102637612,ENSEMBL:ENSMUSG00000112813	MGI:5593535	lncRNA gene	predicted gene, 34376
10	gene	71.31074	71.31398	positive	MGI_C57BL6J_5313056	Gm20609	NCBI_Gene:102637684,ENSEMBL:ENSMUSG00000093732	MGI:5313056	lncRNA gene	predicted gene 20609
10	pseudogene	71.31873	71.31943	positive	MGI_C57BL6J_3643734	Rpl19-ps2	NCBI_Gene:665472,ENSEMBL:ENSMUSG00000112582	MGI:3643734	pseudogene	ribosomal protein L19, pseudogene 2
10	gene	71.33048	71.34495	negative	MGI_C57BL6J_1261855	Cisd1	NCBI_Gene:52637,ENSEMBL:ENSMUSG00000037710	MGI:1261855	protein coding gene	CDGSH iron sulfur domain 1
10	gene	71.33670	71.33962	negative	MGI_C57BL6J_2143791	4932439E07Rik	NA	NA	unclassified gene	RIKEN cDNA 4932439E07 gene
10	gene	71.34776	71.43333	positive	MGI_C57BL6J_1916968	Ipmk	NCBI_Gene:69718,ENSEMBL:ENSMUSG00000060733	MGI:1916968	protein coding gene	inositol polyphosphate multikinase
10	gene	71.47640	71.48552	negative	MGI_C57BL6J_1922563	4930551I15Rik	ENSEMBL:ENSMUSG00000112108	MGI:1922563	lncRNA gene	RIKEN cDNA 4930551I15 gene
10	pseudogene	71.48250	71.48364	positive	MGI_C57BL6J_5825870	Gm46233	NCBI_Gene:108167820,ENSEMBL:ENSMUSG00000112608	MGI:5825870	pseudogene	predicted gene, 46233
10	gene	71.52044	71.52230	negative	MGI_C57BL6J_6095721	Gm47028	ENSEMBL:ENSMUSG00000112416	MGI:6095721	lncRNA gene	predicted gene, 47028
10	gene	71.52727	71.56537	positive	MGI_C57BL6J_5593645	Gm34486	NCBI_Gene:102637756	MGI:5593645	lncRNA gene	predicted gene, 34486
10	gene	71.52728	71.67884	positive	MGI_C57BL6J_5593703	Gm34544	NCBI_Gene:102637834,ENSEMBL:ENSMUSG00000112126	MGI:5593703	lncRNA gene	predicted gene, 34544
10	pseudogene	71.59585	71.59713	negative	MGI_C57BL6J_3644095	Gm4797	NCBI_Gene:216081,ENSEMBL:ENSMUSG00000111965	MGI:3644095	pseudogene	predicted gene 4797
10	pseudogene	71.61165	71.61307	negative	MGI_C57BL6J_5011259	Gm19074	NCBI_Gene:100418206,ENSEMBL:ENSMUSG00000112624	MGI:5011259	pseudogene	predicted gene, 19074
10	pseudogene	71.70372	71.70417	positive	MGI_C57BL6J_6095749	Gm47045	ENSEMBL:ENSMUSG00000112152	MGI:6095749	pseudogene	predicted gene, 47045
10	pseudogene	71.70429	71.70786	positive	MGI_C57BL6J_3644096	Gm4798	NCBI_Gene:216082,ENSEMBL:ENSMUSG00000112714	MGI:3644096	pseudogene	predicted pseudogene 4798
10	pseudogene	71.71678	71.71802	negative	MGI_C57BL6J_3644102	Gm6362	NCBI_Gene:622812,ENSEMBL:ENSMUSG00000112717	MGI:3644102	pseudogene	predicted gene 6362
10	pseudogene	71.79895	71.79991	negative	MGI_C57BL6J_3648383	Gm5080	NCBI_Gene:327767,ENSEMBL:ENSMUSG00000111999	MGI:3648383	pseudogene	predicted gene 5080
10	gene	71.89804	71.89817	positive	MGI_C57BL6J_5452714	Gm22937	ENSEMBL:ENSMUSG00000077142	MGI:5452714	snoRNA gene	predicted gene, 22937
10	gene	71.96261	72.00535	positive	MGI_C57BL6J_5623575	Gm40690	NCBI_Gene:105245205	MGI:5623575	lncRNA gene	predicted gene, 40690
10	pseudogene	71.97988	71.98069	negative	MGI_C57BL6J_1920633	1700049L16Rik	NCBI_Gene:108950,ENSEMBL:ENSMUSG00000043859	MGI:1920633	pseudogene	RIKEN cDNA 1700049L16 gene
10	pseudogene	72.01921	72.01952	positive	MGI_C57BL6J_6095770	Gm47060	ENSEMBL:ENSMUSG00000112185	MGI:6095770	pseudogene	predicted gene, 47060
10	gene	72.02698	72.11244	positive	MGI_C57BL6J_5593768	Gm34609	NCBI_Gene:102637916,ENSEMBL:ENSMUSG00000112414	MGI:5593768	lncRNA gene	predicted gene, 34609
10	pseudogene	72.30920	72.31184	positive	MGI_C57BL6J_3704365	Gm9923	NCBI_Gene:100040505,ENSEMBL:ENSMUSG00000053830	MGI:3704365	pseudogene	predicted pseudogene 9923
10	gene	72.52755	72.52768	positive	MGI_C57BL6J_5454761	Gm24984	ENSEMBL:ENSMUSG00000077642	MGI:5454761	snoRNA gene	predicted gene, 24984
10	gene	72.62307	72.64304	negative	MGI_C57BL6J_5593818	Gm34659	NCBI_Gene:102637980	MGI:5593818	lncRNA gene	predicted gene, 34659
10	gene	72.65484	72.67496	positive	MGI_C57BL6J_1289227	Zwint	NCBI_Gene:52696,ENSEMBL:ENSMUSG00000019923	MGI:1289227	protein coding gene	ZW10 interactor
10	gene	72.65790	72.66177	positive	MGI_C57BL6J_1916486	2610034E01Rik	NA	NA	unclassified gene	RIKEN cDNA 2610034E01 gene
10	pseudogene	72.71793	72.71849	positive	MGI_C57BL6J_6095826	Gm47094	ENSEMBL:ENSMUSG00000112862	MGI:6095826	pseudogene	predicted gene, 47094
10	gene	72.93994	72.97316	negative	MGI_C57BL6J_5593935	Gm34776	NCBI_Gene:102638141,ENSEMBL:ENSMUSG00000112168	MGI:5593935	lncRNA gene	predicted gene, 34776
10	gene	72.97330	73.08670	negative	MGI_C57BL6J_3041175	A330049N07Rik	NCBI_Gene:327768,ENSEMBL:ENSMUSG00000111994	MGI:3041175	lncRNA gene	RIKEN cDNA A330049N07 gene
10	gene	73.09627	74.64983	positive	MGI_C57BL6J_1891428	Pcdh15	NCBI_Gene:11994,ENSEMBL:ENSMUSG00000052613	MGI:1891428	protein coding gene	protocadherin 15
10	gene	73.18293	73.18332	negative	MGI_C57BL6J_5610666	Gm37438	ENSEMBL:ENSMUSG00000102584	MGI:5610666	unclassified gene	predicted gene, 37438
10	gene	73.20140	73.32717	negative	MGI_C57BL6J_3705254	Gm15398	ENSEMBL:ENSMUSG00000085456	MGI:3705254	lncRNA gene	predicted gene 15398
10	pseudogene	73.20153	73.20277	positive	MGI_C57BL6J_3646275	Gm5778	NCBI_Gene:544705,ENSEMBL:ENSMUSG00000091825	MGI:3646275	pseudogene	predicted gene 5778
10	pseudogene	73.27574	73.27609	positive	MGI_C57BL6J_6095833	Gm47098	ENSEMBL:ENSMUSG00000112838	MGI:6095833	pseudogene	predicted gene, 47098
10	pseudogene	73.37233	73.37603	negative	MGI_C57BL6J_5011353	Gm19168	NCBI_Gene:100418377,ENSEMBL:ENSMUSG00000112427	MGI:5011353	pseudogene	predicted gene, 19168
10	gene	73.48997	73.51839	positive	MGI_C57BL6J_3705298	Gm15397	ENSEMBL:ENSMUSG00000085176	MGI:3705298	lncRNA gene	predicted gene 15397
10	pseudogene	73.69010	73.69101	negative	MGI_C57BL6J_3642965	Gm6407	NCBI_Gene:623191,ENSEMBL:ENSMUSG00000093548	MGI:3642965	pseudogene	predicted gene 6407
10	gene	73.88745	73.88812	positive	MGI_C57BL6J_1925054	A930019H14Rik	NA	NA	unclassified gene	RIKEN cDNA A930019H14 gene
10	gene	74.12754	74.13688	negative	MGI_C57BL6J_5623576	Gm40691	NCBI_Gene:105245206	MGI:5623576	lncRNA gene	predicted gene, 40691
10	pseudogene	74.82063	74.82149	positive	MGI_C57BL6J_3644650	Gm7034	NCBI_Gene:630453,ENSEMBL:ENSMUSG00000112686	MGI:3644650	pseudogene	predicted gene 7034
10	pseudogene	74.86286	74.86351	negative	MGI_C57BL6J_3647564	Gm6419	NCBI_Gene:623346,ENSEMBL:ENSMUSG00000072407	MGI:3647564	pseudogene	predicted gene 6419
10	gene	74.95748	75.03435	negative	MGI_C57BL6J_1918486	Rsph14	NCBI_Gene:71236,ENSEMBL:ENSMUSG00000009070	MGI:1918486	protein coding gene	radial spoke head homolog 14 (Chlamydomonas)
10	gene	74.96709	75.01691	positive	MGI_C57BL6J_95780	Gnaz	NCBI_Gene:14687,ENSEMBL:ENSMUSG00000040009	MGI:95780	protein coding gene	guanine nucleotide binding protein, alpha z subunit
10	gene	75.02537	75.03503	positive	MGI_C57BL6J_5623577	Gm40692	NCBI_Gene:105245207,ENSEMBL:ENSMUSG00000112136	MGI:5623577	lncRNA gene	predicted gene, 40692
10	gene	75.03690	75.05475	positive	MGI_C57BL6J_1924127	Rab36	NCBI_Gene:76877,ENSEMBL:ENSMUSG00000020175	MGI:1924127	protein coding gene	RAB36, member RAS oncogene family
10	gene	75.06059	75.18492	positive	MGI_C57BL6J_88141	Bcr	NCBI_Gene:110279,ENSEMBL:ENSMUSG00000009681	MGI:88141	protein coding gene	breakpoint cluster region
10	gene	75.21204	75.31274	positive	MGI_C57BL6J_1921642	Specc1l	NCBI_Gene:74392,ENSEMBL:ENSMUSG00000033444	MGI:1921642	protein coding gene	sperm antigen with calponin homology and coiled-coil domains 1-like
10	pseudogene	75.28135	75.28322	negative	MGI_C57BL6J_5825871	Gm46234	NCBI_Gene:108167821,ENSEMBL:ENSMUSG00000112116	MGI:5825871	pseudogene	predicted gene, 46234
10	gene	75.31686	75.33479	positive	MGI_C57BL6J_99402	Adora2a	NCBI_Gene:11540,ENSEMBL:ENSMUSG00000020178	MGI:99402	protein coding gene	adenosine A2a receptor
10	pseudogene	75.34447	75.35303	positive	MGI_C57BL6J_3645934	Gm5779	NCBI_Gene:544707,ENSEMBL:ENSMUSG00000112471	MGI:3645934	pseudogene	predicted gene 5779
10	gene	75.35111	75.51797	negative	MGI_C57BL6J_1916028	Gucd1	NCBI_Gene:68778,ENSEMBL:ENSMUSG00000033416	MGI:1916028	protein coding gene	guanylyl cyclase domain containing 1
10	gene	75.40075	75.40225	positive	MGI_C57BL6J_5623579	Gm40694	NCBI_Gene:105245209	MGI:5623579	lncRNA gene	predicted gene, 40694
10	gene	75.40112	75.44168	positive	MGI_C57BL6J_2143535	Upb1	NCBI_Gene:103149,ENSEMBL:ENSMUSG00000033427	MGI:2143535	protein coding gene	ureidopropionase, beta
10	gene	75.44262	75.44294	positive	MGI_C57BL6J_5455322	Gm25545	ENSEMBL:ENSMUSG00000084622	MGI:5455322	unclassified non-coding RNA gene	predicted gene, 25545
10	gene	75.44951	75.46310	positive	MGI_C57BL6J_1918375	4933407G14Rik	NCBI_Gene:71125	MGI:1918375	lncRNA gene	RIKEN cDNA 4933407G14 gene
10	pseudogene	75.48309	75.48339	negative	MGI_C57BL6J_6097527	Gm48158	ENSEMBL:ENSMUSG00000112764	MGI:6097527	pseudogene	predicted gene, 48158
10	pseudogene	75.49606	75.49616	positive	MGI_C57BL6J_6097516	Gm48148	ENSEMBL:ENSMUSG00000111955	MGI:6097516	pseudogene	predicted gene, 48148
10	gene	75.51755	75.53738	positive	MGI_C57BL6J_1914582	Snrpd3	NCBI_Gene:67332,ENSEMBL:ENSMUSG00000020180	MGI:1914582	protein coding gene	small nuclear ribonucleoprotein D3
10	pseudogene	75.52629	75.52694	negative	MGI_C57BL6J_5594220	Gm35061	NCBI_Gene:102638517	MGI:5594220	pseudogene	predicted gene, 35061
10	gene	75.55012	75.56092	negative	MGI_C57BL6J_2143657	Lrrc75b	NCBI_Gene:192734,ENSEMBL:ENSMUSG00000046807	MGI:2143657	protein coding gene	leucine rich repeat containing 75B
10	gene	75.56160	75.58620	positive	MGI_C57BL6J_95706	Ggt1	NCBI_Gene:14598,ENSEMBL:ENSMUSG00000006345	MGI:95706	protein coding gene	gamma-glutamyltransferase 1
10	gene	75.58932	75.61720	positive	MGI_C57BL6J_1346063	Ggt5	NCBI_Gene:23887,ENSEMBL:ENSMUSG00000006344	MGI:1346063	protein coding gene	gamma-glutamyltransferase 5
10	pseudogene	75.59014	75.59065	negative	MGI_C57BL6J_3708539	Gm9985	ENSEMBL:ENSMUSG00000055872	MGI:3708539	pseudogene	predicted gene 9985
10	gene	75.61316	75.61327	negative	MGI_C57BL6J_5456179	Gm26402	ENSEMBL:ENSMUSG00000089124	MGI:5456179	snRNA gene	predicted gene, 26402
10	pseudogene	75.61903	75.61977	negative	MGI_C57BL6J_5011873	Gm19688	NCBI_Gene:100503432,ENSEMBL:ENSMUSG00000112643	MGI:5011873	pseudogene	predicted gene, 19688
10	gene	75.63235	75.63640	negative	MGI_C57BL6J_5623580	Gm40695	NCBI_Gene:105245210	MGI:5623580	lncRNA gene	predicted gene, 40695
10	gene	75.63662	75.64401	negative	MGI_C57BL6J_1918983	Susd2	NCBI_Gene:71733,ENSEMBL:ENSMUSG00000006342	MGI:1918983	protein coding gene	sushi domain containing 2
10	gene	75.64611	75.76436	negative	MGI_C57BL6J_1298375	Cabin1	NCBI_Gene:104248,ENSEMBL:ENSMUSG00000020196	MGI:1298375	protein coding gene	calcineurin binding protein 1
10	gene	75.69505	75.70926	positive	MGI_C57BL6J_5623581	Gm40696	NCBI_Gene:105245211	MGI:5623581	lncRNA gene	predicted gene, 40696
10	pseudogene	75.76626	75.76791	positive	MGI_C57BL6J_5011511	Gm19326	NCBI_Gene:105245212,ENSEMBL:ENSMUSG00000112789	MGI:5011511	pseudogene	predicted gene, 19326
10	gene	75.77123	75.77341	negative	MGI_C57BL6J_1298381	Ddt	NCBI_Gene:13202,ENSEMBL:ENSMUSG00000001666	MGI:1298381	protein coding gene	D-dopachrome tautomerase
10	gene	75.77145	75.78095	negative	MGI_C57BL6J_5141906	Gm20441	ENSEMBL:ENSMUSG00000092360	MGI:5141906	protein coding gene	predicted gene 20441
10	gene	75.77411	75.78141	negative	MGI_C57BL6J_2143526	Gstt3	NCBI_Gene:103140,ENSEMBL:ENSMUSG00000001665	MGI:2143526	protein coding gene	glutathione S-transferase, theta 3
10	gene	75.78381	75.79858	negative	MGI_C57BL6J_107379	Gstt1	NCBI_Gene:14871,ENSEMBL:ENSMUSG00000001663	MGI:107379	protein coding gene	glutathione S-transferase, theta 1
10	gene	75.81494	75.82256	negative	MGI_C57BL6J_1923136	Gstt4	NCBI_Gene:75886,ENSEMBL:ENSMUSG00000009093	MGI:1923136	protein coding gene	glutathione S-transferase, theta 4
10	gene	75.83111	75.83742	negative	MGI_C57BL6J_106188	Gstt2	NCBI_Gene:14872,ENSEMBL:ENSMUSG00000033318	MGI:106188	protein coding gene	glutathione S-transferase, theta 2
10	gene	75.83598	75.83742	negative	MGI_C57BL6J_1918377	4933425E08Rik	NA	NA	unclassified gene	RIKEN cDNA 4933425E08 gene
10	gene	75.85935	75.86025	negative	MGI_C57BL6J_96982	Mif	NCBI_Gene:17319,ENSEMBL:ENSMUSG00000033307	MGI:96982	protein coding gene	macrophage migration inhibitory factor (glycosylation-inhibiting factor)
10	gene	75.86040	75.86170	positive	MGI_C57BL6J_5623582	Gm40697	NCBI_Gene:105245213	MGI:5623582	lncRNA gene	predicted gene, 40697
10	pseudogene	75.87543	75.87580	positive	MGI_C57BL6J_6096888	Gm47744	ENSEMBL:ENSMUSG00000112306	MGI:6096888	pseudogene	predicted gene, 47744
10	gene	75.89307	75.89594	positive	MGI_C57BL6J_1917627	Derl3	NCBI_Gene:70377,ENSEMBL:ENSMUSG00000009092	MGI:1917627	protein coding gene	Der1-like domain family, member 3
10	gene	75.89677	75.92162	negative	MGI_C57BL6J_1328366	Smarcb1	NCBI_Gene:20587,ENSEMBL:ENSMUSG00000000902	MGI:1328366	protein coding gene	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
10	gene	75.92322	75.93650	negative	MGI_C57BL6J_97008	Mmp11	NCBI_Gene:17385,ENSEMBL:ENSMUSG00000000901	MGI:97008	protein coding gene	matrix metallopeptidase 11
10	gene	75.93297	75.93775	positive	MGI_C57BL6J_2143558	Chchd10	NCBI_Gene:103172,ENSEMBL:ENSMUSG00000049422	MGI:2143558	protein coding gene	coiled-coil-helix-coiled-coil-helix domain containing 10
10	gene	75.93772	75.94069	negative	MGI_C57BL6J_2685713	Gm867	NCBI_Gene:333670,ENSEMBL:ENSMUSG00000050157	MGI:2685713	protein coding gene	predicted gene 867
10	gene	75.94306	75.94966	positive	MGI_C57BL6J_98938	Vpreb3	NCBI_Gene:22364,ENSEMBL:ENSMUSG00000000903	MGI:98938	protein coding gene	pre-B lymphocyte gene 3
10	pseudogene	75.94530	75.94652	negative	MGI_C57BL6J_3802147	Gm16221	NCBI_Gene:102638935,ENSEMBL:ENSMUSG00000082234	MGI:3802147	pseudogene	predicted gene 16221
10	gene	75.95385	75.95428	negative	MGI_C57BL6J_5623583	Gm40698	NCBI_Gene:105245214	MGI:5623583	lncRNA gene	predicted gene, 40698
10	gene	75.95438	76.00959	positive	MGI_C57BL6J_3646667	Gm5134	NCBI_Gene:333669,ENSEMBL:ENSMUSG00000033255	MGI:3646667	protein coding gene	predicted gene 5134
10	pseudogene	75.96990	75.97017	positive	MGI_C57BL6J_3802165	Gm16219	ENSEMBL:ENSMUSG00000082619	MGI:3802165	pseudogene	predicted gene 16219
10	gene	75.99269	75.99399	negative	MGI_C57BL6J_3802166	Gm16220	ENSEMBL:ENSMUSG00000085662	MGI:3802166	lncRNA gene	predicted gene 16220
10	gene	76.00893	76.00902	positive	MGI_C57BL6J_5531169	Mir6409	miRBase:MI0021946,NCBI_Gene:102466646,ENSEMBL:ENSMUSG00000098817	MGI:5531169	miRNA gene	microRNA 6409
10	gene	76.03240	76.04323	positive	MGI_C57BL6J_1927865	Zfp280b	NCBI_Gene:64453,ENSEMBL:ENSMUSG00000049764	MGI:1927865	protein coding gene	zinc finger protein 280B
10	gene	76.05749	76.11102	negative	MGI_C57BL6J_1890478	Slc5a4b	NCBI_Gene:64454,ENSEMBL:ENSMUSG00000020226	MGI:1890478	protein coding gene	solute carrier family 5 (neutral amino acid transporters, system A), member 4b
10	gene	76.07862	76.08050	positive	MGI_C57BL6J_3801901	Gm16222	NCBI_Gene:102639053,ENSEMBL:ENSMUSG00000086798	MGI:3801901	lncRNA gene	predicted gene 16222
10	pseudogene	76.13343	76.14030	positive	MGI_C57BL6J_5011402	Gm19217	NCBI_Gene:100418445,ENSEMBL:ENSMUSG00000112128	MGI:5011402	pseudogene	predicted gene, 19217
10	gene	76.14745	76.18927	positive	MGI_C57BL6J_1927848	Slc5a4a	NCBI_Gene:64452,ENSEMBL:ENSMUSG00000020229	MGI:1927848	protein coding gene	solute carrier family 5, member 4a
10	gene	76.19780	76.19786	negative	MGI_C57BL6J_3028030	C530045E16Rik	NA	NA	unclassified gene	RIKEN cDNA C530045E16 gene
10	pseudogene	76.19819	76.19898	negative	MGI_C57BL6J_3780796	Gm2628	NCBI_Gene:100040150,ENSEMBL:ENSMUSG00000112625	MGI:3780796	pseudogene	predicted gene 2628
10	gene	76.20722	76.23786	negative	MGI_C57BL6J_1316652	Prmt2	NCBI_Gene:15468,ENSEMBL:ENSMUSG00000020230	MGI:1316652	protein coding gene	protein arginine N-methyltransferase 2
10	gene	76.20733	76.20741	negative	MGI_C57BL6J_3629884	Mir678	miRBase:MI0004635,NCBI_Gene:751554,ENSEMBL:ENSMUSG00000076068	MGI:3629884	miRNA gene	microRNA 678
10	gene	76.25384	76.26132	positive	MGI_C57BL6J_98217	S100b	NCBI_Gene:20203,ENSEMBL:ENSMUSG00000033208	MGI:98217	protein coding gene	S100 protein, beta polypeptide, neural
10	gene	76.25943	76.34529	negative	MGI_C57BL6J_2385920	Dip2a	NCBI_Gene:64451,ENSEMBL:ENSMUSG00000020231	MGI:2385920	protein coding gene	disco interacting protein 2 homolog A
10	gene	76.29317	76.29486	positive	MGI_C57BL6J_3801994	Gm16240	ENSEMBL:ENSMUSG00000089711	MGI:3801994	lncRNA gene	predicted gene 16240
10	gene	76.34538	76.34726	positive	MGI_C57BL6J_5623584	Gm40699	NCBI_Gene:105245215	MGI:5623584	lncRNA gene	predicted gene, 40699
10	gene	76.35125	76.44291	negative	MGI_C57BL6J_102722	Pcnt	NCBI_Gene:18541,ENSEMBL:ENSMUSG00000001151	MGI:102722	protein coding gene	pericentrin (kendrin)
10	gene	76.38902	76.40151	positive	MGI_C57BL6J_1914773	1700094J05Rik	NCBI_Gene:67523,ENSEMBL:ENSMUSG00000101695	MGI:1914773	lncRNA gene	RIKEN cDNA 1700094J05 gene
10	gene	76.44237	76.44387	positive	MGI_C57BL6J_3642478	Gm9744	NA	NA	protein coding gene	predicted gene 9744
10	gene	76.44902	76.46122	positive	MGI_C57BL6J_1924214	2610028H24Rik	NCBI_Gene:76964,ENSEMBL:ENSMUSG00000009114	MGI:1924214	protein coding gene	RIKEN cDNA 2610028H24 gene
10	gene	76.45813	76.46911	negative	MGI_C57BL6J_2656825	Ybey	NCBI_Gene:216119,ENSEMBL:ENSMUSG00000033126	MGI:2656825	protein coding gene	ybeY metallopeptidase
10	gene	76.46893	76.51586	positive	MGI_C57BL6J_1930089	Mcm3ap	NCBI_Gene:54387,ENSEMBL:ENSMUSG00000001150	MGI:1930089	protein coding gene	minichromosome maintenance complex component 3 associated protein
10	gene	76.53157	76.55714	positive	MGI_C57BL6J_1336155	Lss	NCBI_Gene:16987,ENSEMBL:ENSMUSG00000033105	MGI:1336155	protein coding gene	lanosterol synthase
10	gene	76.54587	76.56223	negative	MGI_C57BL6J_1922203	4930483K19Rik	NCBI_Gene:74953,ENSEMBL:ENSMUSG00000086241	MGI:1922203	lncRNA gene	RIKEN cDNA 4930483K19 gene
10	gene	76.56216	76.57020	positive	MGI_C57BL6J_1923823	Spatc1l	NCBI_Gene:76573,ENSEMBL:ENSMUSG00000009115	MGI:1923823	protein coding gene	spermatogenesis and centriole associated 1 like
10	gene	76.56457	76.57053	negative	MGI_C57BL6J_3705126	Gm15343	NCBI_Gene:102639115,ENSEMBL:ENSMUSG00000085468	MGI:3705126	lncRNA gene	predicted gene 15343
10	gene	76.57565	76.59034	positive	MGI_C57BL6J_1339962	Ftcd	NCBI_Gene:14317,ENSEMBL:ENSMUSG00000001155	MGI:1339962	protein coding gene	formiminotransferase cyclodeaminase
10	gene	76.59576	76.62363	negative	MGI_C57BL6J_88460	Col6a2	NCBI_Gene:12834,ENSEMBL:ENSMUSG00000020241	MGI:88460	protein coding gene	collagen, type VI, alpha 2
10	gene	76.67772	76.68680	positive	MGI_C57BL6J_5594767	Gm35608	NCBI_Gene:102639255,ENSEMBL:ENSMUSG00000112721	MGI:5594767	lncRNA gene	predicted gene, 35608
10	gene	76.70879	76.72617	negative	MGI_C57BL6J_88459	Col6a1	NCBI_Gene:12833,ENSEMBL:ENSMUSG00000001119	MGI:88459	protein coding gene	collagen, type VI, alpha 1
10	gene	76.72658	76.73027	negative	MGI_C57BL6J_6097704	Gm48276	ENSEMBL:ENSMUSG00000112291	MGI:6097704	lncRNA gene	predicted gene, 48276
10	gene	76.76185	76.96196	negative	MGI_C57BL6J_1890470	Pcbp3	NCBI_Gene:59093,ENSEMBL:ENSMUSG00000001120	MGI:1890470	protein coding gene	poly(rC) binding protein 3
10	gene	76.96214	76.96260	positive	MGI_C57BL6J_5594823	Gm35664	NCBI_Gene:102639326	MGI:5594823	lncRNA gene	predicted gene, 35664
10	gene	76.96394	77.00857	negative	MGI_C57BL6J_5594880	Gm35721	NCBI_Gene:102639395,ENSEMBL:ENSMUSG00000112143	MGI:5594880	lncRNA gene	predicted gene, 35721
10	gene	76.98322	76.98390	negative	MGI_C57BL6J_5611010	Gm37782	ENSEMBL:ENSMUSG00000102522	MGI:5611010	unclassified gene	predicted gene, 37782
10	gene	77.00477	77.02957	negative	MGI_C57BL6J_3781316	Gm3137	NCBI_Gene:100041099,ENSEMBL:ENSMUSG00000112773	MGI:3781316	lncRNA gene	predicted gene, 3137
10	gene	77.01199	77.02221	positive	MGI_C57BL6J_3642150	Gm10787	NCBI_Gene:100038479,ENSEMBL:ENSMUSG00000074919	MGI:3642150	lncRNA gene	predicted gene 10787
10	gene	77.03224	77.06100	positive	MGI_C57BL6J_103182	Slc19a1	NCBI_Gene:20509,ENSEMBL:ENSMUSG00000001436	MGI:103182	protein coding gene	solute carrier family 19 (folate transporter), member 1
10	gene	77.05218	77.16655	negative	MGI_C57BL6J_88451	Col18a1	NCBI_Gene:12822,ENSEMBL:ENSMUSG00000001435	MGI:88451	protein coding gene	collagen, type XVIII, alpha 1
10	pseudogene	77.13706	77.13824	positive	MGI_C57BL6J_3646054	Gm7775	NCBI_Gene:665762,ENSEMBL:ENSMUSG00000112612	MGI:3646054	pseudogene	predicted gene 7775
10	gene	77.20639	77.24304	positive	MGI_C57BL6J_5594996	Gm35837	NCBI_Gene:102639550	MGI:5594996	lncRNA gene	predicted gene, 35837
10	gene	77.21102	77.21193	positive	MGI_C57BL6J_5623589	Gm40704	NCBI_Gene:105245220	MGI:5623589	lncRNA gene	predicted gene, 40704
10	gene	77.25086	77.25209	negative	MGI_C57BL6J_5623588	Gm40703	NCBI_Gene:105245219	MGI:5623588	lncRNA gene	predicted gene, 40703
10	gene	77.25777	77.25922	negative	MGI_C57BL6J_3779151	Gm10941	NCBI_Gene:100169878,ENSEMBL:ENSMUSG00000078444	MGI:3779151	lncRNA gene	predicted gene 10941
10	gene	77.25922	77.26959	positive	MGI_C57BL6J_1916863	Pofut2	NCBI_Gene:80294,ENSEMBL:ENSMUSG00000020260	MGI:1916863	protein coding gene	protein O-fucosyltransferase 2
10	gene	77.29073	77.41827	negative	MGI_C57BL6J_891999	Adarb1	NCBI_Gene:110532,ENSEMBL:ENSMUSG00000020262	MGI:891999	protein coding gene	adenosine deaminase, RNA-specific, B1
10	gene	77.41838	77.42094	positive	MGI_C57BL6J_5009933	Gm17769	NCBI_Gene:100045653	MGI:5009933	lncRNA gene	predicted gene, 17769
10	gene	77.45792	77.47163	positive	MGI_C57BL6J_5595079	Gm35920	NCBI_Gene:102639662,ENSEMBL:ENSMUSG00000112818	MGI:5595079	lncRNA gene	predicted gene, 35920
10	gene	77.47060	77.47246	positive	MGI_C57BL6J_5595142	Gm35983	NCBI_Gene:102639743	MGI:5595142	lncRNA gene	predicted gene, 35983
10	gene	77.48665	77.51692	negative	MGI_C57BL6J_1916334	Fam207a	NCBI_Gene:108707,ENSEMBL:ENSMUSG00000032977	MGI:1916334	protein coding gene	family with sequence similarity 207, member A
10	gene	77.48666	77.51643	positive	MGI_C57BL6J_1917222	2810425M01Rik	ENSEMBL:ENSMUSG00000097811	MGI:1917222	lncRNA gene	RIKEN cDNA 2810425M01 gene
10	gene	77.52139	77.52254	positive	MGI_C57BL6J_5595199	Gm36040	NCBI_Gene:102639818	MGI:5595199	lncRNA gene	predicted gene, 36040
10	gene	77.53025	77.56571	positive	MGI_C57BL6J_96611	Itgb2	NCBI_Gene:16414,ENSEMBL:ENSMUSG00000000290	MGI:96611	protein coding gene	integrin beta 2
10	gene	77.58172	77.59873	positive	MGI_C57BL6J_2652132	Pttg1ip	NCBI_Gene:108705,ENSEMBL:ENSMUSG00000009291	MGI:2652132	protein coding gene	pituitary tumor-transforming 1 interacting protein
10	gene	77.60610	77.61833	positive	MGI_C57BL6J_1336201	Sumo3	NCBI_Gene:20610,ENSEMBL:ENSMUSG00000020265	MGI:1336201	protein coding gene	small ubiquitin-like modifier 3
10	gene	77.60620	77.64154	positive	MGI_C57BL6J_6121509	Gm49325	ENSEMBL:ENSMUSG00000112241	MGI:6121509	protein coding gene	predicted gene, 49325
10	gene	77.62228	77.64599	positive	MGI_C57BL6J_1343188	Ube2g2	NCBI_Gene:22213,ENSEMBL:ENSMUSG00000009293	MGI:1343188	protein coding gene	ubiquitin-conjugating enzyme E2G 2
10	pseudogene	77.63851	77.64106	negative	MGI_C57BL6J_5825873	Gm46236	NCBI_Gene:108167823	MGI:5825873	pseudogene	predicted gene, 46236
10	gene	77.64122	77.64131	positive	MGI_C57BL6J_3836965	Mir1930	miRBase:MI0009919,NCBI_Gene:100316811,ENSEMBL:ENSMUSG00000089424	MGI:3836965	miRNA gene	microRNA 1930
10	pseudogene	77.65274	77.65336	negative	MGI_C57BL6J_5010304	Gm18119	NCBI_Gene:100416456,ENSEMBL:ENSMUSG00000112007	MGI:5010304	pseudogene	predicted gene, 18119
10	pseudogene	77.68060	77.68109	negative	MGI_C57BL6J_6097530	Gm48160	ENSEMBL:ENSMUSG00000112912	MGI:6097530	pseudogene	predicted gene, 48160
10	gene	77.68603	77.88702	positive	MGI_C57BL6J_2671932	Tspear	NCBI_Gene:252974,ENSEMBL:ENSMUSG00000069581	MGI:2671932	protein coding gene	thrombospondin type laminin G domain and EAR repeats
10	gene	77.68966	77.69129	negative	MGI_C57BL6J_5011587	Gm19402	NCBI_Gene:100502831,ENSEMBL:ENSMUSG00000095970	MGI:5011587	protein coding gene	predicted gene, 19402
10	gene	77.69627	77.69723	negative	MGI_C57BL6J_3779918	Gm9508	NCBI_Gene:670895,ENSEMBL:ENSMUSG00000112170	MGI:3779918	protein coding gene	predicted gene 9508
10	gene	77.70659	77.70699	positive	MGI_C57BL6J_3642183	Gm10272	NCBI_Gene:16697,ENSEMBL:ENSMUSG00000069584	MGI:3642183	protein coding gene	predicted gene 10272
10	gene	77.71145	77.71201	positive	MGI_C57BL6J_3641784	Gm10024	NCBI_Gene:100009614,ENSEMBL:ENSMUSG00000094012	MGI:3641784	protein coding gene	predicted gene 10024
10	gene	77.71581	77.71617	positive	MGI_C57BL6J_3641725	Gm10142	NCBI_Gene:100502921,ENSEMBL:ENSMUSG00000094146	MGI:3641725	protein coding gene	predicted gene 10142
10	pseudogene	77.71790	77.71842	negative	MGI_C57BL6J_6097555	Gm48179	ENSEMBL:ENSMUSG00000112037	MGI:6097555	pseudogene	predicted gene, 48179
10	gene	77.72059	77.72126	positive	MGI_C57BL6J_1328315	Krtap12-1	NCBI_Gene:16694,ENSEMBL:ENSMUSG00000069583	MGI:1328315	protein coding gene	keratin associated protein 12-1
10	gene	77.72649	77.72685	positive	MGI_C57BL6J_3642388	Gm10100	NCBI_Gene:100502953,ENSEMBL:ENSMUSG00000096421	MGI:3642388	protein coding gene	predicted gene 10100
10	pseudogene	77.73484	77.73516	negative	MGI_C57BL6J_6097556	Gm48180	ENSEMBL:ENSMUSG00000112236	MGI:6097556	pseudogene	predicted gene, 48180
10	gene	77.74180	77.74264	negative	MGI_C57BL6J_5010781	Gm18596	NCBI_Gene:100417409,ENSEMBL:ENSMUSG00000112864	MGI:5010781	protein coding gene	predicted gene, 18596
10	pseudogene	77.74949	77.74958	negative	MGI_C57BL6J_6097554	Gm48178	ENSEMBL:ENSMUSG00000111976	MGI:6097554	pseudogene	predicted gene, 48178
10	gene	77.75051	77.75142	negative	MGI_C57BL6J_3842085	Gm9736	NCBI_Gene:77763,ENSEMBL:ENSMUSG00000112380	MGI:3842085	protein coding gene	predicted gene 9736
10	gene	77.75897	77.75984	negative	MGI_C57BL6J_3781411	Gm3233	NCBI_Gene:100041250,ENSEMBL:ENSMUSG00000094120	MGI:3781411	protein coding gene	predicted gene 3233
10	gene	77.77063	77.77133	negative	MGI_C57BL6J_3781416	Gm3238	NCBI_Gene:100041261,ENSEMBL:ENSMUSG00000095817	MGI:3781416	protein coding gene	predicted gene 3238
10	gene	77.77622	77.77694	negative	MGI_C57BL6J_3779678	Gm7138	NCBI_Gene:102640500,ENSEMBL:ENSMUSG00000095593	MGI:3779678	protein coding gene	predicted gene 7138
10	gene	77.78173	77.78254	negative	MGI_C57BL6J_3781428	Gm3250	NCBI_Gene:100041281,ENSEMBL:ENSMUSG00000096481	MGI:3781428	protein coding gene	predicted gene 3250
10	gene	77.78742	77.78820	negative	MGI_C57BL6J_3779677	Gm7137	NCBI_Gene:634504,ENSEMBL:ENSMUSG00000095721	MGI:3779677	protein coding gene	predicted gene 7137
10	gene	77.79440	77.79508	negative	MGI_C57BL6J_3780046	Gm9639	NCBI_Gene:675294,ENSEMBL:ENSMUSG00000096131	MGI:3780046	protein coding gene	predicted gene 9639
10	gene	77.79839	77.79913	negative	MGI_C57BL6J_5011853	Gm19668	NCBI_Gene:100503388,ENSEMBL:ENSMUSG00000096380	MGI:5011853	protein coding gene	predicted gene, 19668
10	gene	77.81097	77.81210	negative	MGI_C57BL6J_3779917	Gm9507	NCBI_Gene:670880,ENSEMBL:ENSMUSG00000094913	MGI:3779917	protein coding gene	predicted gene 9507
10	gene	77.81468	77.81540	positive	MGI_C57BL6J_3780866	Gm2696	NCBI_Gene:100040299	MGI:3780866	protein coding gene	predicted gene 2696
10	gene	77.81468	77.83665	positive	MGI_C57BL6J_6270621	Gm49918	ENSEMBL:ENSMUSG00000112600	MGI:6270621	protein coding gene	predicted gene, 49918
10	gene	77.82612	77.82709	negative	MGI_C57BL6J_1925013	Krtap10-4	NCBI_Gene:100191037,ENSEMBL:ENSMUSG00000069582	MGI:1925013	protein coding gene	keratin associated protein 10-4
10	gene	77.83595	77.83725	positive	MGI_C57BL6J_3645300	Krtap10-10	NCBI_Gene:544710,ENSEMBL:ENSMUSG00000112223	MGI:3645300	protein coding gene	keratin associated protein 10-10
10	gene	77.84680	77.84738	positive	MGI_C57BL6J_5595335	Gm36176	NCBI_Gene:102639995,ENSEMBL:ENSMUSG00000112653	MGI:5595335	protein coding gene	predicted gene, 36176
10	gene	77.85286	77.85379	positive	MGI_C57BL6J_3704118	Gm10318	NCBI_Gene:622629,ENSEMBL:ENSMUSG00000071195	MGI:3704118	protein coding gene	predicted gene 10318
10	gene	77.86198	77.86288	positive	MGI_C57BL6J_3781463	Gm3285	NCBI_Gene:100041351,ENSEMBL:ENSMUSG00000111915	MGI:3781463	protein coding gene	predicted gene 3285
10	gene	77.89342	77.89611	positive	MGI_C57BL6J_1914938	1700009J07Rik	NCBI_Gene:75188,ENSEMBL:ENSMUSG00000096573	MGI:1914938	lncRNA gene	RIKEN cDNA 1700009J07 gene
10	gene	77.89758	77.90254	negative	MGI_C57BL6J_2447899	Lrrc3	NCBI_Gene:237387,ENSEMBL:ENSMUSG00000051652	MGI:2447899	protein coding gene	leucine rich repeat containing 3
10	gene	77.90772	77.97056	negative	MGI_C57BL6J_1351901	Trpm2	NCBI_Gene:28240,ENSEMBL:ENSMUSG00000009292	MGI:1351901	protein coding gene	transient receptor potential cation channel, subfamily M, member 2
10	gene	77.91264	77.91271	negative	MGI_C57BL6J_5452171	Gm22394	ENSEMBL:ENSMUSG00000093784	MGI:5452171	snoRNA gene	predicted gene, 22394
10	gene	77.91380	77.91385	negative	MGI_C57BL6J_5452648	Gm22871	ENSEMBL:ENSMUSG00000093443	MGI:5452648	snoRNA gene	predicted gene, 22871
10	gene	77.93906	77.94026	negative	MGI_C57BL6J_5623590	Gm40705	NCBI_Gene:105245221	MGI:5623590	lncRNA gene	predicted gene, 40705
10	gene	77.97852	77.98690	positive	MGI_C57BL6J_1915134	Cfap410	NCBI_Gene:67884,ENSEMBL:ENSMUSG00000020284	MGI:1915134	protein coding gene	cilia and flagella associated protein 410
10	gene	77.98695	78.01008	negative	MGI_C57BL6J_97547	Pfkl	NCBI_Gene:18641,ENSEMBL:ENSMUSG00000020277	MGI:97547	protein coding gene	phosphofructokinase, liver, B-type
10	gene	78.03002	78.04361	negative	MGI_C57BL6J_1338803	Aire	NCBI_Gene:11634,ENSEMBL:ENSMUSG00000000731	MGI:1338803	protein coding gene	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
10	gene	78.04195	78.06362	positive	MGI_C57BL6J_1859287	Dnmt3l	NCBI_Gene:54427,ENSEMBL:ENSMUSG00000000730	MGI:1859287	protein coding gene	DNA (cytosine-5-)-methyltransferase 3-like
10	gene	78.06930	78.08391	positive	MGI_C57BL6J_1354701	Icosl	NCBI_Gene:50723,ENSEMBL:ENSMUSG00000000732	MGI:1354701	protein coding gene	icos ligand
10	gene	78.09134	78.09296	negative	MGI_C57BL6J_5589198	Gm30039	NCBI_Gene:102631793	MGI:5589198	lncRNA gene	predicted gene, 30039
10	gene	78.12143	78.13810	negative	MGI_C57BL6J_6097178	Gm47922	ENSEMBL:ENSMUSG00000112662	MGI:6097178	lncRNA gene	predicted gene, 47922
10	gene	78.16207	78.16978	negative	MGI_C57BL6J_1351861	Gatd3a	NCBI_Gene:28295,ENSEMBL:ENSMUSG00000053329	MGI:1351861	protein coding gene	glutamine amidotransferase like class 1 domain containing 3A
10	gene	78.17091	78.18517	negative	MGI_C57BL6J_1341200	Pwp2	NCBI_Gene:110816,ENSEMBL:ENSMUSG00000032834	MGI:1341200	protein coding gene	PWP2 periodic tryptophan protein homolog (yeast)
10	gene	78.18672	78.24464	negative	MGI_C57BL6J_1336209	Trappc10	NCBI_Gene:216131,ENSEMBL:ENSMUSG00000000374	MGI:1336209	protein coding gene	trafficking protein particle complex 10
10	gene	78.24662	78.25543	positive	MGI_C57BL6J_5623593	Gm40708	NCBI_Gene:105245224	MGI:5623593	lncRNA gene	predicted gene, 40708
10	gene	78.24888	78.26414	negative	MGI_C57BL6J_5589281	Gm30122	NCBI_Gene:102631905,ENSEMBL:ENSMUSG00000112433	MGI:5589281	lncRNA gene	predicted gene, 30122
10	gene	78.26453	78.26608	negative	MGI_C57BL6J_6097260	Gm47976	ENSEMBL:ENSMUSG00000112300	MGI:6097260	unclassified gene	predicted gene, 47976
10	gene	78.26917	78.35249	negative	MGI_C57BL6J_1336186	Agpat3	NCBI_Gene:28169,ENSEMBL:ENSMUSG00000001211	MGI:1336186	protein coding gene	1-acylglycerol-3-phosphate O-acyltransferase 3
10	gene	78.29832	78.30030	positive	MGI_C57BL6J_6097287	Gm47992	ENSEMBL:ENSMUSG00000112442	MGI:6097287	unclassified gene	predicted gene, 47992
10	gene	78.31417	78.31428	positive	MGI_C57BL6J_4421925	n-R5s77	ENSEMBL:ENSMUSG00000065691	MGI:4421925	rRNA gene	nuclear encoded rRNA 5S 77
10	gene	78.34015	78.34021	negative	MGI_C57BL6J_5530815	Mir7659	miRBase:MI0024999,NCBI_Gene:102465765,ENSEMBL:ENSMUSG00000098885	MGI:5530815	miRNA gene	microRNA 7659
10	gene	78.35247	78.35571	positive	MGI_C57BL6J_5623594	Gm40709	NCBI_Gene:105245225,ENSEMBL:ENSMUSG00000112641	MGI:5623594	lncRNA gene	predicted gene, 40709
10	gene	78.37001	78.37032	negative	MGI_C57BL6J_5452291	Gm22514	ENSEMBL:ENSMUSG00000084496	MGI:5452291	unclassified non-coding RNA gene	predicted gene, 22514
10	pseudogene	78.39330	78.39376	positive	MGI_C57BL6J_3704367	Gm10146	NCBI_Gene:100041500,ENSEMBL:ENSMUSG00000064317	MGI:3704367	pseudogene	predicted gene 10146
10	gene	78.40036	78.41304	negative	MGI_C57BL6J_1203500	Rrp1	NCBI_Gene:18114,ENSEMBL:ENSMUSG00000061032	MGI:1203500	protein coding gene	ribosomal RNA processing 1 homolog (S. cerevisiae)
10	gene	78.40847	78.40855	negative	MGI_C57BL6J_5530733	Mir6907	miRBase:MI0022754,NCBI_Gene:102465547,ENSEMBL:ENSMUSG00000098376	MGI:5530733	miRNA gene	microRNA 6907
10	gene	78.42567	78.42762	positive	MGI_C57BL6J_109514	Cstb	NCBI_Gene:13014,ENSEMBL:ENSMUSG00000005054	MGI:109514	protein coding gene	cystatin B
10	gene	78.42827	78.43885	positive	MGI_C57BL6J_3696861	4921516A02Rik	ENSEMBL:ENSMUSG00000112652	MGI:3696861	lncRNA gene	RIKEN cDNA 4921516A02 gene
10	gene	78.43480	78.43490	positive	MGI_C57BL6J_5531298	Mir6410	miRBase:MI0021947,NCBI_Gene:102465221,ENSEMBL:ENSMUSG00000098932	MGI:5531298	miRNA gene	microRNA 6410
10	gene	78.43674	78.46497	negative	MGI_C57BL6J_1351869	Pdxk	NCBI_Gene:216134,ENSEMBL:ENSMUSG00000032788	MGI:1351869	protein coding gene	pyridoxal (pyridoxine, vitamin B6) kinase
10	gene	78.44509	78.44516	negative	MGI_C57BL6J_5531209	Mir6908	miRBase:MI0022755,NCBI_Gene:102466762,ENSEMBL:ENSMUSG00000098279	MGI:5531209	miRNA gene	microRNA 6908
10	gene	78.46981	78.47126	negative	MGI_C57BL6J_1918516	4933436P19Rik	ENSEMBL:ENSMUSG00000112623	MGI:1918516	unclassified gene	RIKEN cDNA 4933436P19 gene
10	gene	78.48457	78.48784	negative	MGI_C57BL6J_3641806	Gm9978	ENSEMBL:ENSMUSG00000055704	MGI:3641806	protein coding gene	predicted gene 9978
10	gene	78.48706	78.49835	positive	MGI_C57BL6J_5589391	Gm30232	NCBI_Gene:102632059,ENSEMBL:ENSMUSG00000112842	MGI:5589391	lncRNA gene	predicted gene, 30232
10	gene	78.49805	78.52057	positive	MGI_C57BL6J_3031192	Olfr1358	NCBI_Gene:258224,ENSEMBL:ENSMUSG00000107822	MGI:3031192	protein coding gene	olfactory receptor 1358
10	gene	78.50192	78.52022	negative	MGI_C57BL6J_6097210	Gm47944	ENSEMBL:ENSMUSG00000112224	MGI:6097210	lncRNA gene	predicted gene, 47944
10	gene	78.51862	78.51874	positive	MGI_C57BL6J_5454941	Gm25164	ENSEMBL:ENSMUSG00000089533	MGI:5454941	rRNA gene	predicted gene, 25164
10	gene	78.52599	78.52611	positive	MGI_C57BL6J_5530923	Gm27541	ENSEMBL:ENSMUSG00000099247	MGI:5530923	miRNA gene	predicted gene, 27541
10	pseudogene	78.54327	78.54378	positive	MGI_C57BL6J_3647256	Gm5951	NCBI_Gene:546482,ENSEMBL:ENSMUSG00000112313	MGI:3647256	pseudogene	predicted gene 5951
10	pseudogene	78.55402	78.55442	positive	MGI_C57BL6J_3761345	Vmn2r-ps92	NCBI_Gene:100124575,ENSEMBL:ENSMUSG00000111881	MGI:3761345	pseudogene	vomeronasal 2, receptor, pseudogene 92
10	gene	78.57434	78.58450	positive	MGI_C57BL6J_1351911	Ilvbl	NCBI_Gene:216136,ENSEMBL:ENSMUSG00000032763	MGI:1351911	protein coding gene	ilvB (bacterial acetolactate synthase)-like
10	gene	78.58450	78.59196	negative	MGI_C57BL6J_1918959	Syde1	NCBI_Gene:71709,ENSEMBL:ENSMUSG00000032714	MGI:1918959	protein coding gene	synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
10	gene	78.59171	78.59728	positive	MGI_C57BL6J_5589505	Gm30346	NCBI_Gene:102632206,ENSEMBL:ENSMUSG00000112021	MGI:5589505	lncRNA gene	predicted gene, 30346
10	gene	78.59912	78.60187	negative	MGI_C57BL6J_5610742	Gm37514	ENSEMBL:ENSMUSG00000104370	MGI:5610742	unclassified gene	predicted gene, 37514
10	gene	78.61100	78.61807	negative	MGI_C57BL6J_3031191	Olfr1357	NCBI_Gene:257883,ENSEMBL:ENSMUSG00000071185	MGI:3031191	protein coding gene	olfactory receptor 1357
10	pseudogene	78.62892	78.63030	negative	MGI_C57BL6J_3646991	Gm7842	NCBI_Gene:665890,ENSEMBL:ENSMUSG00000112017	MGI:3646991	pseudogene	predicted gene 7842
10	gene	78.62955	78.63262	positive	MGI_C57BL6J_6096421	Gm47459	ENSEMBL:ENSMUSG00000112674	MGI:6096421	lncRNA gene	predicted gene, 47459
10	pseudogene	78.69497	78.69881	negative	MGI_C57BL6J_6096448	Gm47476	ENSEMBL:ENSMUSG00000112689	MGI:6096448	pseudogene	predicted gene, 47476
10	pseudogene	78.69961	78.69987	positive	MGI_C57BL6J_6096478	Gm47495	ENSEMBL:ENSMUSG00000111946	MGI:6096478	pseudogene	predicted gene, 47495
10	gene	78.71199	78.71835	negative	MGI_C57BL6J_1335092	Casp14	NCBI_Gene:12365,ENSEMBL:ENSMUSG00000005355	MGI:1335092	protein coding gene	caspase 14
10	gene	78.74692	78.75307	negative	MGI_C57BL6J_1918226	Ccdc105	NCBI_Gene:70976,ENSEMBL:ENSMUSG00000078442	MGI:1918226	protein coding gene	coiled-coil domain containing 105
10	gene	78.74713	78.77236	positive	MGI_C57BL6J_5589559	Gm30400	NCBI_Gene:102632284,ENSEMBL:ENSMUSG00000109776	MGI:5589559	lncRNA gene	predicted gene, 30400
10	gene	78.77950	78.78782	negative	MGI_C57BL6J_5623595	Gm40710	NCBI_Gene:105245226	MGI:5623595	lncRNA gene	predicted gene, 40710
10	gene	78.78050	78.81482	positive	MGI_C57BL6J_1096331	Slc1a6	NCBI_Gene:20513,ENSEMBL:ENSMUSG00000005357	MGI:1096331	protein coding gene	solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
10	gene	78.84505	78.85217	negative	MGI_C57BL6J_3031190	Olfr1356	NCBI_Gene:258305,ENSEMBL:ENSMUSG00000051190	MGI:3031190	protein coding gene	olfactory receptor 1356
10	gene	78.87554	78.88227	positive	MGI_C57BL6J_3031189	Olfr1355	NCBI_Gene:257734,ENSEMBL:ENSMUSG00000062873	MGI:3031189	protein coding gene	olfactory receptor 1355
10	gene	78.91317	78.92040	positive	MGI_C57BL6J_3031188	Olfr1354	NCBI_Gene:259163,ENSEMBL:ENSMUSG00000094673	MGI:3031188	protein coding gene	olfactory receptor 1354
10	gene	78.95064	78.95838	positive	MGI_C57BL6J_107174	Olfr8	NCBI_Gene:18372,ENSEMBL:ENSMUSG00000094080	MGI:107174	protein coding gene	olfactory receptor 8
10	gene	78.96331	78.97134	positive	MGI_C57BL6J_3031187	Olfr1353	NCBI_Gene:259044,ENSEMBL:ENSMUSG00000042774	MGI:3031187	protein coding gene	olfactory receptor 1353
10	gene	78.97210	79.01289	negative	MGI_C57BL6J_6096238	Gm47343	ENSEMBL:ENSMUSG00000112732	MGI:6096238	lncRNA gene	predicted gene, 47343
10	gene	78.98105	78.98790	positive	MGI_C57BL6J_3031186	Olfr1352	NCBI_Gene:259074,ENSEMBL:ENSMUSG00000046493	MGI:3031186	protein coding gene	olfactory receptor 1352
10	gene	79.01247	79.01964	positive	MGI_C57BL6J_3031185	Olfr1351	NCBI_Gene:259042,ENSEMBL:ENSMUSG00000063216	MGI:3031185	protein coding gene	olfactory receptor 1351
10	gene	79.02781	79.03603	positive	MGI_C57BL6J_5623597	Gm40712	NCBI_Gene:105245228	MGI:5623597	lncRNA gene	predicted gene, 40712
10	gene	79.02874	79.03627	positive	MGI_C57BL6J_1333808	Olfr57	NCBI_Gene:18357,ENSEMBL:ENSMUSG00000060205	MGI:1333808	protein coding gene	olfactory receptor 57
10	gene	79.06437	79.09762	negative	MGI_C57BL6J_1919378	2610008E11Rik	NCBI_Gene:72128,ENSEMBL:ENSMUSG00000060301	MGI:1919378	protein coding gene	RIKEN cDNA 2610008E11 gene
10	gene	79.14877	79.19501	positive	MGI_C57BL6J_3646321	Vmn2r80	NCBI_Gene:624765,ENSEMBL:ENSMUSG00000091888	MGI:3646321	protein coding gene	vomeronasal 2, receptor 80
10	gene	79.24769	79.29453	positive	MGI_C57BL6J_2684056	Vmn2r81	NCBI_Gene:216144,ENSEMBL:ENSMUSG00000055515	MGI:2684056	protein coding gene	vomeronasal 2, receptor 81
10	gene	79.35652	79.39785	positive	MGI_C57BL6J_3646522	Vmn2r82	NCBI_Gene:624845,ENSEMBL:ENSMUSG00000091468	MGI:3646522	protein coding gene	vomeronasal 2, receptor 82
10	gene	79.41296	79.41791	negative	MGI_C57BL6J_6095697	Gm47015	ENSEMBL:ENSMUSG00000112907	MGI:6095697	lncRNA gene	predicted gene, 47015
10	gene	79.46873	79.49358	positive	MGI_C57BL6J_3644559	Vmn2r83	NCBI_Gene:625029,ENSEMBL:ENSMUSG00000091381	MGI:3644559	protein coding gene	vomeronasal 2, receptor 83
10	gene	79.52642	79.53380	negative	MGI_C57BL6J_1354945	Plpp2	NCBI_Gene:50784,ENSEMBL:ENSMUSG00000052151	MGI:1354945	protein coding gene	phospholipid phosphatase 2
10	gene	79.53103	79.53109	negative	MGI_C57BL6J_5531109	Mir6909	miRBase:MI0022756,NCBI_Gene:102465548,ENSEMBL:ENSMUSG00000098414	MGI:5531109	miRNA gene	microRNA 6909
10	gene	79.54024	79.55890	negative	MGI_C57BL6J_1917677	Mier2	NCBI_Gene:70427,ENSEMBL:ENSMUSG00000042570	MGI:1917677	protein coding gene	MIER family member 2
10	gene	79.57638	79.58733	negative	MGI_C57BL6J_1338756	Theg	NCBI_Gene:21830,ENSEMBL:ENSMUSG00000020317	MGI:1338756	protein coding gene	testicular haploid expressed gene
10	gene	79.60685	79.61402	negative	MGI_C57BL6J_2685084	C2cd4c	NCBI_Gene:237397,ENSEMBL:ENSMUSG00000045912	MGI:2685084	protein coding gene	C2 calcium-dependent domain containing 4C
10	gene	79.61793	79.63792	negative	MGI_C57BL6J_106180	Shc2	NCBI_Gene:216148,ENSEMBL:ENSMUSG00000020312	MGI:106180	protein coding gene	SHC (Src homology 2 domain containing) transforming protein 2
10	gene	79.63786	79.63952	positive	MGI_C57BL6J_6095939	Gm47163	ENSEMBL:ENSMUSG00000111977	MGI:6095939	lncRNA gene	predicted gene, 47163
10	gene	79.63953	79.64574	negative	MGI_C57BL6J_2686003	Odf3l2	NCBI_Gene:382384,ENSEMBL:ENSMUSG00000035963	MGI:2686003	protein coding gene	outer dense fiber of sperm tails 3-like 2
10	gene	79.66439	79.66854	positive	MGI_C57BL6J_103579	Madcam1	NCBI_Gene:17123,ENSEMBL:ENSMUSG00000020310	MGI:103579	protein coding gene	mucosal vascular addressin cell adhesion molecule 1
10	gene	79.66937	79.67613	positive	MGI_C57BL6J_106618	Tpgs1	NCBI_Gene:110012,ENSEMBL:ENSMUSG00000020308	MGI:106618	protein coding gene	tubulin polyglutamylase complex subunit 1
10	gene	79.68219	79.68840	positive	MGI_C57BL6J_102657	Cdc34	NCBI_Gene:216150,ENSEMBL:ENSMUSG00000020307	MGI:102657	protein coding gene	cell division cycle 34
10	gene	79.68902	79.69526	positive	MGI_C57BL6J_99549	Gzmm	NCBI_Gene:16904,ENSEMBL:ENSMUSG00000054206	MGI:99549	protein coding gene	granzyme M (lymphocyte met-ase 1)
10	gene	79.70348	79.70359	negative	MGI_C57BL6J_5455571	Gm25794	ENSEMBL:ENSMUSG00000065220	MGI:5455571	snRNA gene	predicted gene, 25794
10	gene	79.70436	79.71198	positive	MGI_C57BL6J_88208	Bsg	NCBI_Gene:12215,ENSEMBL:ENSMUSG00000023175	MGI:88208	protein coding gene	basigin
10	gene	79.71619	79.71691	negative	MGI_C57BL6J_5589639	Gm30480	NCBI_Gene:102632396	MGI:5589639	lncRNA gene	predicted gene, 30480
10	gene	79.71663	79.73611	positive	MGI_C57BL6J_1298210	Hcn2	NCBI_Gene:15166,ENSEMBL:ENSMUSG00000020331	MGI:1298210	protein coding gene	hyperpolarization-activated, cyclic nucleotide-gated K+ 2
10	gene	79.73612	79.74659	negative	MGI_C57BL6J_1915843	Polrmt	NCBI_Gene:216151,ENSEMBL:ENSMUSG00000020329	MGI:1915843	protein coding gene	polymerase (RNA) mitochondrial (DNA directed)
10	gene	79.75458	79.75860	positive	MGI_C57BL6J_1914362	Fgf22	NCBI_Gene:67112,ENSEMBL:ENSMUSG00000020327	MGI:1914362	protein coding gene	fibroblast growth factor 22
10	gene	79.75852	79.76701	negative	MGI_C57BL6J_1917544	Rnf126	NCBI_Gene:70294,ENSEMBL:ENSMUSG00000035890	MGI:1917544	protein coding gene	ring finger protein 126
10	gene	79.77727	79.78263	positive	MGI_C57BL6J_1890391	Fstl3	NCBI_Gene:83554,ENSEMBL:ENSMUSG00000020325	MGI:1890391	protein coding gene	follistatin-like 3
10	gene	79.78147	79.79474	negative	MGI_C57BL6J_1920356	Prss57	NCBI_Gene:73106,ENSEMBL:ENSMUSG00000020323	MGI:1920356	protein coding gene	protease, serine 57
10	gene	79.79357	79.82091	positive	MGI_C57BL6J_1261814	Palm	NCBI_Gene:18483,ENSEMBL:ENSMUSG00000035863	MGI:1261814	protein coding gene	paralemmin
10	gene	79.79378	79.79466	negative	MGI_C57BL6J_6098020	Gm48495	ENSEMBL:ENSMUSG00000112828	MGI:6098020	lncRNA gene	predicted gene, 48495
10	gene	79.80068	79.80702	negative	MGI_C57BL6J_5623598	Gm40713	NCBI_Gene:105245229	MGI:5623598	lncRNA gene	predicted gene, 40713
10	gene	79.82099	79.83049	positive	MGI_C57BL6J_1926156	Misp	NCBI_Gene:78906,ENSEMBL:ENSMUSG00000035852	MGI:1926156	protein coding gene	mitotic spindle positioning
10	gene	79.85138	79.85497	negative	MGI_C57BL6J_3041202	E130317F20Rik	NCBI_Gene:414101,ENSEMBL:ENSMUSG00000091994	MGI:3041202	lncRNA gene	RIKEN cDNA E130317F20 gene
10	gene	79.85443	79.86477	positive	MGI_C57BL6J_97791	Ptbp1	NCBI_Gene:19205,ENSEMBL:ENSMUSG00000006498	MGI:97791	protein coding gene	polypyrimidine tract binding protein 1
10	gene	79.86047	79.87463	negative	MGI_C57BL6J_2388640	Plppr3	NCBI_Gene:216152,ENSEMBL:ENSMUSG00000035835	MGI:2388640	protein coding gene	phospholipid phosphatase related 3
10	gene	79.86259	79.86265	positive	MGI_C57BL6J_5531145	Mir6910	miRBase:MI0022757,NCBI_Gene:102465549,ENSEMBL:ENSMUSG00000098562	MGI:5531145	miRNA gene	microRNA 6910
10	gene	79.86394	79.86443	negative	MGI_C57BL6J_4937961	Gm17134	ENSEMBL:ENSMUSG00000090860	MGI:4937961	lncRNA gene	predicted gene 17134
10	gene	79.87448	79.88317	positive	MGI_C57BL6J_893580	Prtn3	NCBI_Gene:19152,ENSEMBL:ENSMUSG00000057729	MGI:893580	protein coding gene	proteinase 3
10	gene	79.88625	79.88822	positive	MGI_C57BL6J_2679229	Elane	NCBI_Gene:50701,ENSEMBL:ENSMUSG00000020125	MGI:2679229	protein coding gene	elastase, neutrophil expressed
10	pseudogene	79.88866	79.88901	positive	MGI_C57BL6J_5011995	Gm19810	NCBI_Gene:102632476,ENSEMBL:ENSMUSG00000111897	MGI:5011995	pseudogene	predicted gene, 19810
10	gene	79.89085	79.89266	positive	MGI_C57BL6J_87931	Cfd	NCBI_Gene:11537,ENSEMBL:ENSMUSG00000061780	MGI:87931	protein coding gene	complement factor D (adipsin)
10	gene	79.89471	79.90894	negative	MGI_C57BL6J_2158394	Med16	NCBI_Gene:216154,ENSEMBL:ENSMUSG00000013833	MGI:2158394	protein coding gene	mediator complex subunit 16
10	gene	79.90919	79.90930	positive	MGI_C57BL6J_5453796	Gm24019	ENSEMBL:ENSMUSG00000095023	MGI:5453796	snRNA gene	predicted gene, 24019
10	gene	79.91005	79.92121	negative	MGI_C57BL6J_1924814	R3hdm4	NCBI_Gene:109284,ENSEMBL:ENSMUSG00000035781	MGI:1924814	protein coding gene	R3H domain containing 4
10	gene	79.91086	79.91114	positive	MGI_C57BL6J_5477096	Gm26602	ENSEMBL:ENSMUSG00000097854	MGI:5477096	protein coding gene	predicted gene, 26602
10	gene	79.91696	79.92409	positive	MGI_C57BL6J_2148793	Kiss1r	NCBI_Gene:114229,ENSEMBL:ENSMUSG00000035773	MGI:2148793	protein coding gene	KISS1 receptor
10	gene	79.92469	79.92693	negative	MGI_C57BL6J_5623600	Gm40715	NCBI_Gene:105245231	MGI:5623600	lncRNA gene	predicted gene, 40715
10	gene	79.92704	79.95502	positive	MGI_C57BL6J_1328360	Arid3a	NCBI_Gene:13496,ENSEMBL:ENSMUSG00000019564	MGI:1328360	protein coding gene	AT rich interactive domain 3A (BRIGHT-like)
10	gene	79.95999	79.97020	positive	MGI_C57BL6J_2158400	Wdr18	NCBI_Gene:216156,ENSEMBL:ENSMUSG00000035754	MGI:2158400	protein coding gene	WD repeat domain 18
10	gene	79.97040	79.97719	positive	MGI_C57BL6J_2150393	Grin3b	NCBI_Gene:170483,ENSEMBL:ENSMUSG00000035745	MGI:2150393	protein coding gene	glutamate receptor, ionotropic, NMDA3B
10	gene	79.97495	79.98433	negative	MGI_C57BL6J_2177957	Tmem259	NCBI_Gene:216157,ENSEMBL:ENSMUSG00000013858	MGI:2177957	protein coding gene	transmembrane protein 259
10	gene	79.98551	79.98561	positive	MGI_C57BL6J_5456020	Gm26243	ENSEMBL:ENSMUSG00000095615	MGI:5456020	snRNA gene	predicted gene, 26243
10	gene	79.98858	79.99606	positive	MGI_C57BL6J_105093	Cnn2	NCBI_Gene:12798,ENSEMBL:ENSMUSG00000004665	MGI:105093	protein coding gene	calponin 2
10	gene	79.99645	80.01557	positive	MGI_C57BL6J_1351646	Abca7	NCBI_Gene:27403,ENSEMBL:ENSMUSG00000035722	MGI:1351646	protein coding gene	ATP-binding cassette, sub-family A (ABC1), member 7
10	gene	80.01665	80.03147	positive	MGI_C57BL6J_1917969	Arhgap45	NCBI_Gene:70719,ENSEMBL:ENSMUSG00000035697	MGI:1917969	protein coding gene	Rho GTPase activating protein 45
10	gene	80.03595	80.03979	negative	MGI_C57BL6J_1913670	Polr2e	NCBI_Gene:66420,ENSEMBL:ENSMUSG00000004667	MGI:1913670	protein coding gene	polymerase (RNA) II (DNA directed) polypeptide E
10	gene	80.04717	80.05644	positive	MGI_C57BL6J_104767	Gpx4	NCBI_Gene:625249,ENSEMBL:ENSMUSG00000075706	MGI:104767	protein coding gene	glutathione peroxidase 4
10	gene	80.05699	80.10611	negative	MGI_C57BL6J_2448490	Sbno2	NCBI_Gene:216161,ENSEMBL:ENSMUSG00000035673	MGI:2448490	protein coding gene	strawberry notch 2
10	gene	80.07389	80.08172	positive	MGI_C57BL6J_5825874	Gm46237	NCBI_Gene:108167824	MGI:5825874	lncRNA gene	predicted gene, 46237
10	gene	80.11569	80.13068	positive	MGI_C57BL6J_1341870	Stk11	NCBI_Gene:20869,ENSEMBL:ENSMUSG00000003068	MGI:1341870	protein coding gene	serine/threonine kinase 11
10	gene	80.13043	80.14083	negative	MGI_C57BL6J_1354170	Cbarp	NCBI_Gene:100503659,ENSEMBL:ENSMUSG00000035640	MGI:1354170	protein coding gene	calcium channel, voltage-dependent, beta subunit associated regulatory protein
10	gene	80.13863	80.14582	positive	MGI_C57BL6J_1913293	Atp5d	NCBI_Gene:66043,ENSEMBL:ENSMUSG00000003072	MGI:1913293	protein coding gene	ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
10	gene	80.14824	80.15837	positive	MGI_C57BL6J_1890222	Midn	NCBI_Gene:59090,ENSEMBL:ENSMUSG00000035621	MGI:1890222	protein coding gene	midnolin
10	gene	80.16599	80.17279	positive	MGI_C57BL6J_893588	Cirbp	NCBI_Gene:12696,ENSEMBL:ENSMUSG00000045193	MGI:893588	protein coding gene	cold inducible RNA binding protein
10	gene	80.17294	80.17515	positive	MGI_C57BL6J_1917020	1600002K03Rik	NCBI_Gene:69770,ENSEMBL:ENSMUSG00000035595	MGI:1917020	protein coding gene	RIKEN cDNA 1600002K03 gene
10	gene	80.17948	80.19001	positive	MGI_C57BL6J_102707	Efna2	NCBI_Gene:13637,ENSEMBL:ENSMUSG00000003070	MGI:102707	protein coding gene	ephrin A2
10	gene	80.22643	80.24514	positive	MGI_C57BL6J_1915364	Pwwp3a	NCBI_Gene:68114,ENSEMBL:ENSMUSG00000020156	MGI:1915364	protein coding gene	PWWP domain containing 3A, DNA repair factor
10	gene	80.24896	80.24904	negative	MGI_C57BL6J_4413998	n-TFgaa3	NCBI_Gene:102467582	MGI:4413998	tRNA gene	nuclear encoded tRNA pheylalanine 3 (anticodon GAA)
10	gene	80.24912	80.25679	positive	MGI_C57BL6J_1922656	Ndufs7	NCBI_Gene:75406,ENSEMBL:ENSMUSG00000020153	MGI:1922656	protein coding gene	NADH:ubiquinone oxidoreductase core subunit S7
10	gene	80.24916	80.24923	positive	MGI_C57BL6J_4413744	n-TNgtt7	NCBI_Gene:102467422	MGI:4413744	tRNA gene	nuclear encoded tRNA asparagine 7 (anticodon GTT)
10	gene	80.25815	80.26103	negative	MGI_C57BL6J_1098221	Gamt	NCBI_Gene:14431,ENSEMBL:ENSMUSG00000020150	MGI:1098221	protein coding gene	guanidinoacetate methyltransferase
10	gene	80.26147	80.28841	positive	MGI_C57BL6J_1917498	Dazap1	NCBI_Gene:70248,ENSEMBL:ENSMUSG00000069565	MGI:1917498	protein coding gene	DAZ associated protein 1
10	gene	80.27816	80.27823	positive	MGI_C57BL6J_5531204	Mir6911	miRBase:MI0022758,NCBI_Gene:102466207,ENSEMBL:ENSMUSG00000098672	MGI:5531204	miRNA gene	microRNA 6911
10	gene	80.28244	80.28301	negative	MGI_C57BL6J_3705268	Gm15122	ENSEMBL:ENSMUSG00000087672	MGI:3705268	lncRNA gene	predicted gene 15122
10	gene	80.29243	80.29411	positive	MGI_C57BL6J_98117	Rps15	NCBI_Gene:20054,ENSEMBL:ENSMUSG00000063457	MGI:98117	protein coding gene	ribosomal protein S15
10	gene	80.29420	80.29640	negative	MGI_C57BL6J_5589841	Gm30682	NCBI_Gene:102632666	MGI:5589841	lncRNA gene	predicted gene, 30682
10	gene	80.29596	80.31826	positive	MGI_C57BL6J_1346052	Apc2	NCBI_Gene:23805,ENSEMBL:ENSMUSG00000020135	MGI:1346052	protein coding gene	adenomatosis polyposis coli 2
10	gene	80.31825	80.32055	negative	MGI_C57BL6J_1913624	2310011J03Rik	NCBI_Gene:66374,ENSEMBL:ENSMUSG00000020133	MGI:1913624	protein coding gene	RIKEN cDNA 2310011J03 gene
10	gene	80.32128	80.32991	negative	MGI_C57BL6J_97514	Pcsk4	NCBI_Gene:18551,ENSEMBL:ENSMUSG00000020131	MGI:97514	protein coding gene	proprotein convertase subtilisin/kexin type 4
10	gene	80.32995	80.33644	positive	MGI_C57BL6J_1917585	Reep6	NCBI_Gene:70335,ENSEMBL:ENSMUSG00000035504	MGI:1917585	protein coding gene	receptor accessory protein 6
10	gene	80.33911	80.34904	negative	MGI_C57BL6J_1913798	Adamtsl5	NCBI_Gene:66548,ENSEMBL:ENSMUSG00000043822	MGI:1913798	protein coding gene	ADAMTS-like 5
10	gene	80.35646	80.36549	positive	MGI_C57BL6J_3026984	Plk5	NCBI_Gene:216166,ENSEMBL:ENSMUSG00000035486	MGI:3026984	protein coding gene	polo like kinase 5
10	gene	80.37190	80.37243	positive	MGI_C57BL6J_3705256	Gm15123	ENSEMBL:ENSMUSG00000087432	MGI:3705256	lncRNA gene	predicted gene 15123
10	gene	80.37195	80.37322	positive	MGI_C57BL6J_3705261	Gm15124	ENSEMBL:ENSMUSG00000085712	MGI:3705261	lncRNA gene	predicted gene 15124
10	pseudogene	80.37717	80.37755	negative	MGI_C57BL6J_6096965	Gm47793	ENSEMBL:ENSMUSG00000112648	MGI:6096965	pseudogene	predicted gene, 47793
10	gene	80.38035	80.38766	negative	MGI_C57BL6J_2681847	Mex3d	NCBI_Gene:237400,ENSEMBL:ENSMUSG00000048696	MGI:2681847	protein coding gene	mex3 RNA binding family member D
10	gene	80.38230	80.38238	positive	MGI_C57BL6J_5452498	Gm22721	ENSEMBL:ENSMUSG00000084658	MGI:5452498	miRNA gene	predicted gene, 22721
10	gene	80.38776	80.39507	positive	MGI_C57BL6J_5589982	Gm30823	NCBI_Gene:102632860	MGI:5589982	lncRNA gene	predicted gene, 30823
10	gene	80.39254	80.39955	negative	MGI_C57BL6J_1333812	Mbd3	NCBI_Gene:17192,ENSEMBL:ENSMUSG00000035478	MGI:1333812	protein coding gene	methyl-CpG binding domain protein 3
10	gene	80.40131	80.40167	negative	MGI_C57BL6J_1917496	3300002P09Rik	NA	NA	unclassified gene	RIKEN cDNA 3300002P09 gene
10	gene	80.40300	80.40683	negative	MGI_C57BL6J_1913844	Uqcr11	NCBI_Gene:66594,ENSEMBL:ENSMUSG00000020163	MGI:1913844	protein coding gene	ubiquinol-cytochrome c reductase, complex III subunit XI
10	gene	80.40917	80.43396	negative	MGI_C57BL6J_98510	Tcf3	NCBI_Gene:21423,ENSEMBL:ENSMUSG00000020167	MGI:98510	protein coding gene	transcription factor 3
10	gene	80.47141	80.47538	negative	MGI_C57BL6J_5623601	Gm40716	NCBI_Gene:105245232	MGI:5623601	lncRNA gene	predicted gene, 40716
10	gene	80.47635	80.47646	positive	MGI_C57BL6J_5454821	Gm25044	ENSEMBL:ENSMUSG00000089228	MGI:5454821	snRNA gene	predicted gene, 25044
10	gene	80.49483	80.51728	positive	MGI_C57BL6J_1891409	Onecut3	NCBI_Gene:246086,ENSEMBL:ENSMUSG00000045518	MGI:1891409	protein coding gene	one cut domain, family member 3
10	gene	80.50877	80.50962	positive	MGI_C57BL6J_1923612	2610034O05Rik	ENSEMBL:ENSMUSG00000104429	MGI:1923612	unclassified gene	RIKEN cDNA 2610034O05 gene
10	gene	80.51958	80.53915	negative	MGI_C57BL6J_1914581	Atp8b3	NCBI_Gene:67331,ENSEMBL:ENSMUSG00000003341	MGI:1914581	protein coding gene	ATPase, class I, type 8B, member 3
10	gene	80.54092	80.56227	negative	MGI_C57BL6J_1914182	Rexo1	NCBI_Gene:66932,ENSEMBL:ENSMUSG00000047417	MGI:1914182	protein coding gene	REX1, RNA exonuclease 1
10	gene	80.54749	80.55530	positive	MGI_C57BL6J_5590216	Gm31057	NCBI_Gene:102633159	MGI:5590216	lncRNA gene	predicted gene, 31057
10	gene	80.56712	80.57732	negative	MGI_C57BL6J_2153049	Klf16	NCBI_Gene:118445,ENSEMBL:ENSMUSG00000035397	MGI:2153049	protein coding gene	Kruppel-like factor 16
10	gene	80.56992	80.58068	positive	MGI_C57BL6J_5477204	Gm26710	NCBI_Gene:102633244,ENSEMBL:ENSMUSG00000097013	MGI:5477204	lncRNA gene	predicted gene, 26710
10	gene	80.58365	80.59034	negative	MGI_C57BL6J_106388	Abhd17a	NCBI_Gene:216169,ENSEMBL:ENSMUSG00000003346	MGI:106388	protein coding gene	abhydrolase domain containing 17A
10	gene	80.58796	80.58979	negative	MGI_C57BL6J_5579799	Gm29093	ENSEMBL:ENSMUSG00000100201	MGI:5579799	lncRNA gene	predicted gene 29093
10	gene	80.60287	80.61578	positive	MGI_C57BL6J_1928947	Scamp4	NCBI_Gene:56214,ENSEMBL:ENSMUSG00000113949	MGI:1928947	protein coding gene	secretory carrier membrane protein 4
10	gene	80.60288	80.60765	positive	MGI_C57BL6J_1924344	Adat3	NCBI_Gene:100113398,ENSEMBL:ENSMUSG00000113640	MGI:1924344	protein coding gene	adenosine deaminase, tRNA-specific 3
10	gene	80.60602	80.61578	positive	MGI_C57BL6J_6121503	Gm49322	ENSEMBL:ENSMUSG00000035370	MGI:6121503	protein coding gene	predicted gene, 49322
10	gene	80.60926	80.60933	positive	MGI_C57BL6J_5531372	Mir6912	miRBase:MI0022759,NCBI_Gene:102465550,ENSEMBL:ENSMUSG00000099283	MGI:5531372	miRNA gene	microRNA 6912
10	gene	80.61296	80.62261	negative	MGI_C57BL6J_5590457	Gm31298	NCBI_Gene:102633484	MGI:5590457	lncRNA gene	predicted gene, 31298
10	gene	80.62270	80.64077	positive	MGI_C57BL6J_1920014	Csnk1g2	NCBI_Gene:103236,ENSEMBL:ENSMUSG00000003345	MGI:1920014	protein coding gene	casein kinase 1, gamma 2
10	gene	80.64262	80.65712	negative	MGI_C57BL6J_1933831	Btbd2	NCBI_Gene:208198,ENSEMBL:ENSMUSG00000003344	MGI:1933831	protein coding gene	BTB (POZ) domain containing 2
10	gene	80.66532	80.67811	negative	MGI_C57BL6J_894279	Mknk2	NCBI_Gene:17347,ENSEMBL:ENSMUSG00000020190	MGI:894279	protein coding gene	MAP kinase-interacting serine/threonine kinase 2
10	gene	80.68184	80.68718	positive	MGI_C57BL6J_5477035	Gm26541	ENSEMBL:ENSMUSG00000097889	MGI:5477035	lncRNA gene	predicted gene, 26541
10	gene	80.68525	80.70198	negative	MGI_C57BL6J_3050117	Mob3a	NCBI_Gene:208228,ENSEMBL:ENSMUSG00000003348	MGI:3050117	protein coding gene	MOB kinase activator 3A
10	gene	80.70201	80.70538	positive	MGI_C57BL6J_1918814	Izumo4	NCBI_Gene:71564,ENSEMBL:ENSMUSG00000055862	MGI:1918814	protein coding gene	IZUMO family member 4
10	gene	80.70696	80.74228	negative	MGI_C57BL6J_107734	Ap3d1	NCBI_Gene:11776,ENSEMBL:ENSMUSG00000020198	MGI:107734	protein coding gene	adaptor-related protein complex 3, delta 1 subunit
10	gene	80.75513	80.79546	positive	MGI_C57BL6J_2143886	Dot1l	NCBI_Gene:208266,ENSEMBL:ENSMUSG00000061589	MGI:2143886	protein coding gene	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
10	gene	80.76686	80.76899	negative	MGI_C57BL6J_4937978	Gm17151	ENSEMBL:ENSMUSG00000075558	MGI:4937978	lncRNA gene	predicted gene 17151
10	gene	80.79610	80.79863	negative	MGI_C57BL6J_1925920	Plekhj1	NCBI_Gene:78670,ENSEMBL:ENSMUSG00000035278	MGI:1925920	protein coding gene	pleckstrin homology domain containing, family J member 1
10	gene	80.79820	80.80492	positive	MGI_C57BL6J_104912	Sf3a2	NCBI_Gene:20222,ENSEMBL:ENSMUSG00000020211	MGI:104912	protein coding gene	splicing factor 3a, subunit 2
10	gene	80.80503	80.80768	positive	MGI_C57BL6J_88006	Amh	NCBI_Gene:11705,ENSEMBL:ENSMUSG00000035262	MGI:88006	protein coding gene	anti-Mullerian hormone
10	gene	80.80849	80.81373	negative	MGI_C57BL6J_1916700	Jsrp1	NCBI_Gene:71912,ENSEMBL:ENSMUSG00000020216	MGI:1916700	protein coding gene	junctional sarcoplasmic reticulum protein 1
10	gene	80.82666	80.82929	positive	MGI_C57BL6J_109433	Oaz1	NCBI_Gene:18245,ENSEMBL:ENSMUSG00000035242	MGI:109433	protein coding gene	ornithine decarboxylase antizyme 1
10	gene	80.82880	80.82887	positive	MGI_C57BL6J_3837227	Mir1982	miRBase:MI0009993,NCBI_Gene:100316778,ENSEMBL:ENSMUSG00000087993	MGI:3837227	miRNA gene	microRNA 1982
10	gene	80.83280	80.84404	negative	MGI_C57BL6J_3609246	Lingo3	NCBI_Gene:237403,ENSEMBL:ENSMUSG00000051067	MGI:3609246	protein coding gene	leucine rich repeat and Ig domain containing 3
10	gene	80.85282	80.85525	negative	MGI_C57BL6J_1913344	Lsm7	NCBI_Gene:66094,ENSEMBL:ENSMUSG00000035215	MGI:1913344	protein coding gene	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
10	gene	80.85525	80.86871	positive	MGI_C57BL6J_1920468	Sppl2b	NCBI_Gene:73218,ENSEMBL:ENSMUSG00000035206	MGI:1920468	protein coding gene	signal peptide peptidase like 2B
10	gene	80.87112	80.89950	positive	MGI_C57BL6J_3612246	Tmprss9	NCBI_Gene:432478,ENSEMBL:ENSMUSG00000059406	MGI:3612246	protein coding gene	transmembrane protease, serine 9
10	gene	80.89945	80.90097	negative	MGI_C57BL6J_1353432	Timm13	NCBI_Gene:30055,ENSEMBL:ENSMUSG00000020219	MGI:1353432	protein coding gene	translocase of inner mitochondrial membrane 13
10	gene	80.90120	80.91824	negative	MGI_C57BL6J_96796	Lmnb2	NCBI_Gene:16907,ENSEMBL:ENSMUSG00000062075	MGI:96796	protein coding gene	lamin B2
10	gene	80.93007	80.93220	positive	MGI_C57BL6J_107776	Gadd45b	NCBI_Gene:17873,ENSEMBL:ENSMUSG00000015312	MGI:107776	protein coding gene	growth arrest and DNA-damage-inducible 45 beta
10	gene	80.94862	81.01494	negative	MGI_C57BL6J_95787	Gng7	NCBI_Gene:14708,ENSEMBL:ENSMUSG00000048240	MGI:95787	protein coding gene	guanine nucleotide binding protein (G protein), gamma 7
10	pseudogene	80.95425	80.95561	negative	MGI_C57BL6J_3782000	Gm3828	NCBI_Gene:102633671,ENSEMBL:ENSMUSG00000083808	MGI:3782000	pseudogene	predicted gene 3828
10	gene	81.01959	81.02582	negative	MGI_C57BL6J_2183442	Diras1	NCBI_Gene:208666,ENSEMBL:ENSMUSG00000043670	MGI:2183442	protein coding gene	DIRAS family, GTP-binding RAS-like 1
10	gene	81.02481	81.02657	positive	MGI_C57BL6J_3802061	Gm16099	ENSEMBL:ENSMUSG00000087114	MGI:3802061	lncRNA gene	predicted gene 16099
10	gene	81.02854	81.03743	negative	MGI_C57BL6J_2147269	Slc39a3	NCBI_Gene:106947,ENSEMBL:ENSMUSG00000046822	MGI:2147269	protein coding gene	solute carrier family 39 (zinc transporter), member 3
10	gene	81.04407	81.06023	negative	MGI_C57BL6J_1098703	Sgta	NCBI_Gene:52551,ENSEMBL:ENSMUSG00000004937	MGI:1098703	protein coding gene	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
10	gene	81.07004	81.08256	positive	MGI_C57BL6J_1354165	Thop1	NCBI_Gene:50492,ENSEMBL:ENSMUSG00000004929	MGI:1354165	protein coding gene	thimet oligopeptidase 1
10	gene	81.08432	81.09887	negative	MGI_C57BL6J_2384786	Creb3l3	NCBI_Gene:208677,ENSEMBL:ENSMUSG00000035041	MGI:2384786	protein coding gene	cAMP responsive element binding protein 3-like 3
10	gene	81.10461	81.10467	negative	MGI_C57BL6J_5562727	Mir5615-1	miRBase:MI0019181,NCBI_Gene:100885825,ENSEMBL:ENSMUSG00000106347	MGI:5562727	miRNA gene	microRNA 5615-1
10	gene	81.10462	81.10468	positive	MGI_C57BL6J_5453144	Mir5615-2	miRBase:MI0019182,NCBI_Gene:100885826,ENSEMBL:ENSMUSG00000093498	MGI:5453144	miRNA gene	microRNA 5615-2
10	gene	81.10591	81.13398	positive	MGI_C57BL6J_1346867	Map2k2	NCBI_Gene:26396,ENSEMBL:ENSMUSG00000035027	MGI:1346867	protein coding gene	mitogen-activated protein kinase kinase 2
10	gene	81.12898	81.13069	positive	MGI_C57BL6J_5590696	Gm31537	NA	NA	unclassified non-coding RNA gene	predicted gene%2c 31537
10	gene	81.13522	81.15300	positive	MGI_C57BL6J_1335091	Zbtb7a	NCBI_Gene:16969,ENSEMBL:ENSMUSG00000035011	MGI:1335091	protein coding gene	zinc finger and BTB domain containing 7a
10	gene	81.15327	81.16792	negative	MGI_C57BL6J_2136940	Pias4	NCBI_Gene:59004,ENSEMBL:ENSMUSG00000004934	MGI:2136940	protein coding gene	protein inhibitor of activated STAT 4
10	gene	81.17663	81.18251	positive	MGI_C57BL6J_95288	Eef2	NCBI_Gene:13629,ENSEMBL:ENSMUSG00000034994	MGI:95288	protein coding gene	eukaryotic translation elongation factor 2
10	gene	81.17895	81.17901	positive	MGI_C57BL6J_3819530	Snord37	NCBI_Gene:100217454,ENSEMBL:ENSMUSG00000064441	MGI:3819530	snoRNA gene	small nucleolar RNA, C/D box 37
10	gene	81.18260	81.18385	negative	MGI_C57BL6J_1922144	4930442H23Rik	ENSEMBL:ENSMUSG00000053603	MGI:1922144	lncRNA gene	RIKEN cDNA 4930442H23 gene
10	gene	81.18299	81.19320	positive	MGI_C57BL6J_1203520	Dapk3	NCBI_Gene:13144,ENSEMBL:ENSMUSG00000034974	MGI:1203520	protein coding gene	death-associated protein kinase 3
10	gene	81.19461	81.21088	positive	MGI_C57BL6J_1916928	Atcayos	NCBI_Gene:69678,ENSEMBL:ENSMUSG00000085779	MGI:1916928	antisense lncRNA gene	ataxia, cerebellar, Cayman type, opposite strand
10	gene	81.19817	81.20221	negative	MGI_C57BL6J_1916814	Nmrk2	NCBI_Gene:69564,ENSEMBL:ENSMUSG00000004939	MGI:1916814	protein coding gene	nicotinamide riboside kinase 2
10	gene	81.20451	81.23083	negative	MGI_C57BL6J_2448730	Atcay	NCBI_Gene:16467,ENSEMBL:ENSMUSG00000034958	MGI:2448730	protein coding gene	ataxia, cerebellar, Cayman type
10	gene	81.23314	81.25212	positive	MGI_C57BL6J_2143792	Zfr2	NCBI_Gene:103406,ENSEMBL:ENSMUSG00000034949	MGI:2143792	protein coding gene	zinc finger RNA binding protein 2
10	gene	81.25280	81.26336	positive	MGI_C57BL6J_99259	Matk	NCBI_Gene:17179,ENSEMBL:ENSMUSG00000004933	MGI:99259	protein coding gene	megakaryocyte-associated tyrosine kinase
10	gene	81.26471	81.26693	negative	MGI_C57BL6J_1913297	Mrpl54	NCBI_Gene:66047,ENSEMBL:ENSMUSG00000034932	MGI:1913297	protein coding gene	mitochondrial ribosomal protein L54
10	gene	81.26696	81.27325	positive	MGI_C57BL6J_1888527	Apba3	NCBI_Gene:57267,ENSEMBL:ENSMUSG00000004931	MGI:1888527	protein coding gene	amyloid beta (A4) precursor protein-binding, family A, member 3
10	gene	81.27160	81.27169	positive	MGI_C57BL6J_4834230	Mir3057	miRBase:MI0014020,NCBI_Gene:100526465,ENSEMBL:ENSMUSG00000092781	MGI:4834230	miRNA gene	microRNA 3057
10	gene	81.27319	81.29158	negative	MGI_C57BL6J_1351650	Tjp3	NCBI_Gene:27375,ENSEMBL:ENSMUSG00000034917	MGI:1351650	protein coding gene	tight junction protein 3
10	gene	81.29296	81.31997	positive	MGI_C57BL6J_1298224	Pip5k1c	NCBI_Gene:18717,ENSEMBL:ENSMUSG00000034902	MGI:1298224	protein coding gene	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
10	gene	81.30170	81.30294	negative	MGI_C57BL6J_3826564	Gm16315	NCBI_Gene:108167825,ENSEMBL:ENSMUSG00000090230	MGI:3826564	lncRNA gene	predicted gene 16315
10	gene	81.32110	81.32625	positive	MGI_C57BL6J_1917562	Cactin	NCBI_Gene:70312,ENSEMBL:ENSMUSG00000034889	MGI:1917562	protein coding gene	cactin, spliceosome C complex subunit
10	gene	81.32826	81.33518	positive	MGI_C57BL6J_98496	Tbxa2r	NCBI_Gene:21390,ENSEMBL:ENSMUSG00000034881	MGI:98496	protein coding gene	thromboxane A2 receptor
10	gene	81.33527	81.34374	negative	MGI_C57BL6J_2387006	Gipc3	NCBI_Gene:209047,ENSEMBL:ENSMUSG00000034872	MGI:2387006	protein coding gene	GIPC PDZ domain containing family, member 3
10	gene	81.34605	81.35051	negative	MGI_C57BL6J_1341190	Hmg20b	NCBI_Gene:15353,ENSEMBL:ENSMUSG00000020232	MGI:1341190	protein coding gene	high mobility group 20B
10	gene	81.35747	81.36623	positive	MGI_C57BL6J_3604804	Mfsd12	NCBI_Gene:73822,ENSEMBL:ENSMUSG00000034854	MGI:3604804	protein coding gene	major facilitator superfamily domain containing 12
10	gene	81.36307	81.36582	negative	MGI_C57BL6J_1921072	4930404N11Rik	NCBI_Gene:432479,ENSEMBL:ENSMUSG00000020234	MGI:1921072	protein coding gene	RIKEN cDNA 4930404N11 gene
10	gene	81.36622	81.37852	negative	MGI_C57BL6J_1926790	Fzr1	NCBI_Gene:56371,ENSEMBL:ENSMUSG00000020235	MGI:1926790	protein coding gene	fizzy and cell division cycle 20 related 1
10	gene	81.38443	81.38835	positive	MGI_C57BL6J_1915964	Dohh	NCBI_Gene:102115,ENSEMBL:ENSMUSG00000078440	MGI:1915964	protein coding gene	deoxyhypusine hydroxylase/monooxygenase
10	gene	81.38447	81.39156	positive	MGI_C57BL6J_6098103	Gm48551	ENSEMBL:ENSMUSG00000113262	MGI:6098103	protein coding gene	predicted gene, 48551
10	gene	81.38635	81.38641	positive	MGI_C57BL6J_5531170	Mir6913	miRBase:MI0022760,NCBI_Gene:102466763,ENSEMBL:ENSMUSG00000098811	MGI:5531170	miRNA gene	microRNA 6913
10	gene	81.38900	81.39127	positive	MGI_C57BL6J_6098105	Gm48552	ENSEMBL:ENSMUSG00000114004	MGI:6098105	protein coding gene	predicted gene, 48552
10	gene	81.39305	81.39539	positive	MGI_C57BL6J_1919523	Smim24	NCBI_Gene:72273,ENSEMBL:ENSMUSG00000078439	MGI:1919523	protein coding gene	small integral membrane protein 24
10	gene	81.39619	81.45564	negative	MGI_C57BL6J_109591	Nfic	NCBI_Gene:18029,ENSEMBL:ENSMUSG00000055053	MGI:109591	protein coding gene	nuclear factor I/C
10	gene	81.40958	81.41160	positive	MGI_C57BL6J_3801749	Gm16104	NCBI_Gene:102634174,ENSEMBL:ENSMUSG00000085327	MGI:3801749	lncRNA gene	predicted gene 16104
10	gene	81.41624	81.41630	negative	MGI_C57BL6J_5562728	Mir1191b	miRBase:MI0025021,NCBI_Gene:102465778,ENSEMBL:ENSMUSG00000105379	MGI:5562728	miRNA gene	microRNA 1191b
10	gene	81.43147	81.43192	positive	MGI_C57BL6J_5590923	Gm31764	NCBI_Gene:102634102	MGI:5590923	lncRNA gene	predicted gene, 31764
10	gene	81.45923	81.48272	negative	MGI_C57BL6J_2442333	Celf5	NCBI_Gene:319586,ENSEMBL:ENSMUSG00000034818	MGI:2442333	protein coding gene	CUGBP, Elav-like family member 5
10	gene	81.46116	81.46297	positive	MGI_C57BL6J_3801737	Gm16105	ENSEMBL:ENSMUSG00000084849	MGI:3801737	lncRNA gene	predicted gene 16105
10	gene	81.48625	81.49669	negative	MGI_C57BL6J_1926081	Ncln	NCBI_Gene:103425,ENSEMBL:ENSMUSG00000020238	MGI:1926081	protein coding gene	nicalin
10	gene	81.49774	81.50014	negative	MGI_C57BL6J_1333809	S1pr4	NCBI_Gene:13611,ENSEMBL:ENSMUSG00000044199	MGI:1333809	protein coding gene	sphingosine-1-phosphate receptor 4
10	gene	81.50231	81.52448	negative	MGI_C57BL6J_95770	Gna15	NCBI_Gene:14676,ENSEMBL:ENSMUSG00000034792	MGI:95770	protein coding gene	guanine nucleotide binding protein, alpha 15
10	pseudogene	81.50447	81.50477	positive	MGI_C57BL6J_3801781	Gm16106	ENSEMBL:ENSMUSG00000082828	MGI:3801781	pseudogene	predicted gene 16106
10	gene	81.50462	81.50472	positive	MGI_C57BL6J_5455372	Gm25595	ENSEMBL:ENSMUSG00000076228	MGI:5455372	miRNA gene	predicted gene, 25595
10	gene	81.52541	81.52699	positive	MGI_C57BL6J_6096808	Gm47697	ENSEMBL:ENSMUSG00000112350	MGI:6096808	lncRNA gene	predicted gene, 47697
10	gene	81.52872	81.54519	negative	MGI_C57BL6J_95766	Gna11	NCBI_Gene:14672,ENSEMBL:ENSMUSG00000034781	MGI:95766	protein coding gene	guanine nucleotide binding protein, alpha 11
10	gene	81.55944	81.56637	positive	MGI_C57BL6J_95806	Tle5	NCBI_Gene:14797,ENSEMBL:ENSMUSG00000054452	MGI:95806	protein coding gene	TLE family member 5, transcriptional modulator
10	gene	81.56905	81.57179	positive	MGI_C57BL6J_5591095	Gm31936	NCBI_Gene:102634328	MGI:5591095	lncRNA gene	predicted gene, 31936
10	gene	81.57261	81.57594	negative	MGI_C57BL6J_3801972	Gm15917	ENSEMBL:ENSMUSG00000090034	MGI:3801972	lncRNA gene	predicted gene 15917
10	gene	81.57456	81.59258	positive	MGI_C57BL6J_104635	Tle2	NCBI_Gene:21886,ENSEMBL:ENSMUSG00000034771	MGI:104635	protein coding gene	transducin-like enhancer of split 2
10	gene	81.59090	81.60119	negative	MGI_C57BL6J_2149593	Tle6	NCBI_Gene:114606,ENSEMBL:ENSMUSG00000034758	MGI:2149593	protein coding gene	transducin-like enhancer of split 6
10	gene	81.59451	81.59910	positive	MGI_C57BL6J_5591183	Gm32024	NCBI_Gene:102634443	MGI:5591183	lncRNA gene	predicted gene, 32024
10	gene	81.60627	81.62070	positive	MGI_C57BL6J_2670983	BC025920	NCBI_Gene:268319,ENSEMBL:ENSMUSG00000074862	MGI:2670983	protein coding gene	cDNA sequence BC025920
10	gene	81.60637	81.60979	negative	MGI_C57BL6J_5477390	Gm26896	ENSEMBL:ENSMUSG00000097718	MGI:5477390	lncRNA gene	predicted gene, 26896
10	gene	81.62179	81.62780	negative	MGI_C57BL6J_1354161	Sirt6	NCBI_Gene:50721,ENSEMBL:ENSMUSG00000034748	MGI:1354161	protein coding gene	sirtuin 6
10	gene	81.62769	81.64761	positive	MGI_C57BL6J_1890394	Ankrd24	NCBI_Gene:70615,ENSEMBL:ENSMUSG00000054708	MGI:1890394	protein coding gene	ankyrin repeat domain 24
10	gene	81.64906	81.66736	positive	MGI_C57BL6J_3809656	Gm10778	NCBI_Gene:100233208,ENSEMBL:ENSMUSG00000096856	MGI:3809656	protein coding gene	predicted gene 10778
10	pseudogene	81.67912	81.68051	positive	MGI_C57BL6J_6096529	Gm47527	ENSEMBL:ENSMUSG00000112585	MGI:6096529	pseudogene	predicted gene, 47527
10	pseudogene	81.69368	81.69524	negative	MGI_C57BL6J_3645531	Gm8112	NCBI_Gene:108167775,ENSEMBL:ENSMUSG00000112001	MGI:3645531	pseudogene	predicted gene 8112
10	gene	81.70419	81.72669	positive	MGI_C57BL6J_1920860	Zfp433	NCBI_Gene:73610,ENSEMBL:ENSMUSG00000096795	MGI:1920860	protein coding gene	zinc finger protein 433
10	pseudogene	81.71460	81.71650	positive	MGI_C57BL6J_3647617	Gm8249	NCBI_Gene:105245234,ENSEMBL:ENSMUSG00000112061	MGI:3647617	pseudogene	predicted gene 8249
10	pseudogene	81.71704	81.71756	negative	MGI_C57BL6J_6096532	Gm47529	ENSEMBL:ENSMUSG00000112339	MGI:6096532	pseudogene	predicted gene, 47529
10	pseudogene	81.72790	81.72909	positive	MGI_C57BL6J_3642939	Gm5173	NCBI_Gene:382388,ENSEMBL:ENSMUSG00000112621	MGI:3642939	pseudogene	predicted gene 5173
10	gene	81.74282	81.77116	negative	MGI_C57BL6J_3809197	Gm3055	NCBI_Gene:100040944,ENSEMBL:ENSMUSG00000094622	MGI:3809197	protein coding gene	predicted gene 3055
10	pseudogene	81.80443	81.80570	positive	MGI_C57BL6J_6096545	Gm47537	ENSEMBL:ENSMUSG00000112877	MGI:6096545	pseudogene	predicted gene, 47537
10	gene	81.81194	81.82649	positive	MGI_C57BL6J_3644409	Gm4767	NCBI_Gene:210583,ENSEMBL:ENSMUSG00000094076	MGI:3644409	protein coding gene	predicted gene 4767
10	pseudogene	81.81843	81.81898	negative	MGI_C57BL6J_3647363	Gm8264	NCBI_Gene:666738,ENSEMBL:ENSMUSG00000112740	MGI:3647363	pseudogene	predicted gene 8264
10	pseudogene	81.85277	81.85332	negative	MGI_C57BL6J_3647467	Gm8137	NCBI_Gene:666501,ENSEMBL:ENSMUSG00000112697	MGI:3647467	pseudogene	predicted gene 8137
10	gene	81.86344	81.88291	positive	MGI_C57BL6J_5591846	Gm32687	NCBI_Gene:102635315,ENSEMBL:ENSMUSG00000112640	MGI:5591846	protein coding gene	predicted gene, 32687
10	pseudogene	81.87371	81.87557	positive	MGI_C57BL6J_3648016	Gm8274	NCBI_Gene:105245237,ENSEMBL:ENSMUSG00000112196	MGI:3648016	pseudogene	predicted gene 8274
10	pseudogene	81.87615	81.87667	negative	MGI_C57BL6J_6096547	Gm47539	ENSEMBL:ENSMUSG00000112760	MGI:6096547	pseudogene	predicted gene, 47539
10	pseudogene	81.88699	81.88818	positive	MGI_C57BL6J_3644502	Gm8153	NCBI_Gene:666537,ENSEMBL:ENSMUSG00000112311	MGI:3644502	pseudogene	predicted gene 8153
10	gene	81.90191	81.93127	negative	MGI_C57BL6J_3696710	Zfp781	NCBI_Gene:331188,ENSEMBL:ENSMUSG00000096718	MGI:3696710	protein coding gene	zinc finger protein 781
10	pseudogene	81.96380	81.96509	positive	MGI_C57BL6J_6096560	Gm47546	ENSEMBL:ENSMUSG00000112205	MGI:6096560	pseudogene	predicted gene, 47546
10	gene	81.97809	81.99536	positive	MGI_C57BL6J_5011987	Gm19802	NCBI_Gene:105245236	MGI:5011987	protein coding gene	predicted gene, 19802
10	pseudogene	81.98590	81.98645	negative	MGI_C57BL6J_3647883	Gm8158	NCBI_Gene:666548,ENSEMBL:ENSMUSG00000112051	MGI:3647883	pseudogene	predicted gene 8158
10	gene	81.99597	82.01164	positive	MGI_C57BL6J_3642231	Gm10777	NCBI_Gene:102635133	MGI:3642231	lncRNA gene	predicted gene 10777
10	pseudogene	82.00829	82.00981	positive	MGI_C57BL6J_3648461	Gm8290	NCBI_Gene:666790,ENSEMBL:ENSMUSG00000111985	MGI:3648461	pseudogene	predicted gene 8290
10	pseudogene	82.00948	82.00980	negative	MGI_C57BL6J_5825831	Gm46194	NCBI_Gene:108167776,ENSEMBL:ENSMUSG00000112502	MGI:5825831	pseudogene	predicted gene, 46194
10	gene	82.01170	82.01723	positive	MGI_C57BL6J_5592537	Gm33378	NCBI_Gene:102636264,ENSEMBL:ENSMUSG00000112790	MGI:5592537	protein coding gene	predicted gene, 33378
10	pseudogene	82.02053	82.02171	positive	MGI_C57BL6J_3644928	Gm8170	NCBI_Gene:666571,ENSEMBL:ENSMUSG00000112381	MGI:3644928	pseudogene	predicted gene 8170
10	gene	82.04464	82.04804	negative	MGI_C57BL6J_3034336	AL117821	NA	NA	unclassified gene	expressed sequence AL117821
10	gene	82.04645	82.04805	negative	MGI_C57BL6J_5825832	Gm46195	NCBI_Gene:108167777	MGI:5825832	lncRNA gene	predicted gene, 46195
10	gene	82.04809	82.07773	positive	MGI_C57BL6J_3040689	Zfp873	NCBI_Gene:408062,ENSEMBL:ENSMUSG00000061371	MGI:3040689	protein coding gene	zinc finger protein 873
10	pseudogene	82.05611	82.05724	negative	MGI_C57BL6J_5010741	Gm18556	NCBI_Gene:100417356,ENSEMBL:ENSMUSG00000112373	MGI:5010741	pseudogene	predicted gene, 18556
10	gene	82.08301	82.08362	negative	MGI_C57BL6J_3041223	D430050E20Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA D430050E20 gene
10	gene	82.08332	82.11122	positive	MGI_C57BL6J_2670978	BC024063	NCBI_Gene:666584,ENSEMBL:ENSMUSG00000112160	MGI:2670978	protein coding gene	cDNA sequence BC024063
10	gene	82.08341	82.08567	positive	MGI_C57BL6J_3041160	4933439G19Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 4933439G19 gene
10	gene	82.12668	82.12829	negative	MGI_C57BL6J_1918064	4921506L19Rik	NA	NA	unclassified gene	RIKEN cDNA 4921506L19 gene
10	gene	82.12801	82.15306	positive	MGI_C57BL6J_2143755	AU041133	NCBI_Gene:216177,ENSEMBL:ENSMUSG00000078435	MGI:2143755	protein coding gene	expressed sequence AU041133
10	gene	82.15710	82.16046	positive	MGI_C57BL6J_6096602	Gm47572	ENSEMBL:ENSMUSG00000112922	MGI:6096602	unclassified gene	predicted gene, 47572
10	gene	82.16425	82.16678	positive	MGI_C57BL6J_6096604	Gm47573	ENSEMBL:ENSMUSG00000112847	MGI:6096604	unclassified gene	predicted gene, 47573
10	gene	82.17763	82.19129	positive	MGI_C57BL6J_5623605	Gm40720	NCBI_Gene:105245239	MGI:5623605	lncRNA gene	predicted gene, 40720
10	gene	82.17824	82.20149	positive	MGI_C57BL6J_3801804	Gm15608	NCBI_Gene:105245241,ENSEMBL:ENSMUSG00000112110	MGI:3801804	lncRNA gene	predicted gene 15608
10	gene	82.17842	82.18109	positive	MGI_C57BL6J_3642233	Gm10776	NA	NA	unclassified gene	predicted gene 10776
10	pseudogene	82.21905	82.22446	positive	MGI_C57BL6J_3782155	Gm3982	NCBI_Gene:105245240	MGI:3782155	pseudogene	predicted gene 3982
10	gene	82.22457	82.24128	negative	MGI_C57BL6J_3621440	Zfp938	NCBI_Gene:237411,ENSEMBL:ENSMUSG00000062931	MGI:3621440	protein coding gene	zinc finger protein 938
10	pseudogene	82.26645	82.26687	negative	MGI_C57BL6J_6096302	Gm47382	ENSEMBL:ENSMUSG00000111930	MGI:6096302	pseudogene	predicted gene, 47382
10	gene	82.28211	82.31658	negative	MGI_C57BL6J_3045298	4932415D10Rik	NCBI_Gene:102635990,ENSEMBL:ENSMUSG00000044581	MGI:3045298	protein coding gene	RIKEN cDNA 4932415D10 gene
10	gene	82.31538	82.31656	negative	MGI_C57BL6J_1918439	4933426I03Rik	NA	NA	unclassified gene	RIKEN cDNA 4933426I03 gene
10	gene	82.35422	82.42288	positive	MGI_C57BL6J_3643133	Gm4924	NCBI_Gene:237412,ENSEMBL:ENSMUSG00000073427	MGI:3643133	protein coding gene	predicted gene 4924
10	pseudogene	82.43070	82.43239	positive	MGI_C57BL6J_3646272	Gm8188	NCBI_Gene:666611,ENSEMBL:ENSMUSG00000112163	MGI:3646272	pseudogene	predicted gene 8188
10	pseudogene	82.44262	82.44294	positive	MGI_C57BL6J_6096993	Gm47809	ENSEMBL:ENSMUSG00000112070	MGI:6096993	pseudogene	predicted gene, 47809
10	gene	82.48653	82.49262	negative	MGI_C57BL6J_2686399	Gm1553	NCBI_Gene:432480,ENSEMBL:ENSMUSG00000094186	MGI:2686399	protein coding gene	predicted gene 1553
10	pseudogene	82.56677	82.56751	positive	MGI_C57BL6J_5011371	Gm19186	NCBI_Gene:100418403,ENSEMBL:ENSMUSG00000112560	MGI:5011371	pseudogene	predicted gene, 19186
10	pseudogene	82.58538	82.58754	positive	MGI_C57BL6J_3645307	Ap3m1-ps	NCBI_Gene:544716,ENSEMBL:ENSMUSG00000094683	MGI:3645307	pseudogene	adaptor-related protein complex 3, mu 1 subunit, pseudogene
10	gene	82.61326	82.61895	negative	MGI_C57BL6J_5623606	Gm40721	NCBI_Gene:105245242	MGI:5623606	lncRNA gene	predicted gene, 40721
10	gene	82.61985	82.62323	negative	MGI_C57BL6J_3698433	1190007I07Rik	NCBI_Gene:544717,ENSEMBL:ENSMUSG00000063320	MGI:3698433	protein coding gene	RIKEN cDNA 1190007I07 gene
10	gene	82.62982	82.65080	positive	MGI_C57BL6J_108247	Tdg	NCBI_Gene:21665,ENSEMBL:ENSMUSG00000034674	MGI:108247	protein coding gene	thymine DNA glycosylase
10	gene	82.65043	82.69412	negative	MGI_C57BL6J_1922032	Glt8d2	NCBI_Gene:74782,ENSEMBL:ENSMUSG00000020251	MGI:1922032	protein coding gene	glycosyltransferase 8 domain containing 2
10	gene	82.69616	82.79587	positive	MGI_C57BL6J_1915183	Hcfc2	NCBI_Gene:67933,ENSEMBL:ENSMUSG00000020246	MGI:1915183	protein coding gene	host cell factor C2
10	gene	82.74870	82.76414	negative	MGI_C57BL6J_97317	Nfyb	NCBI_Gene:18045,ENSEMBL:ENSMUSG00000020248	MGI:97317	protein coding gene	nuclear transcription factor-Y beta
10	pseudogene	82.76974	82.76990	negative	MGI_C57BL6J_6096583	Gm47560	ENSEMBL:ENSMUSG00000112107	MGI:6096583	pseudogene	predicted gene, 47560
10	gene	82.77132	82.77778	positive	MGI_C57BL6J_6096584	Gm47561	ENSEMBL:ENSMUSG00000112286	MGI:6096584	lncRNA gene	predicted gene, 47561
10	gene	82.81212	82.82424	positive	MGI_C57BL6J_1917253	1700028I16Rik	NCBI_Gene:70003,ENSEMBL:ENSMUSG00000056821	MGI:1917253	lncRNA gene	RIKEN cDNA 1700028I16 gene
10	gene	82.83395	82.89772	positive	MGI_C57BL6J_1354175	Txnrd1	NCBI_Gene:50493,ENSEMBL:ENSMUSG00000020250	MGI:1354175	protein coding gene	thioredoxin reductase 1
10	gene	82.84534	82.85921	negative	MGI_C57BL6J_5621445	Gm38560	NCBI_Gene:102641476,ENSEMBL:ENSMUSG00000112375	MGI:5621445	lncRNA gene	predicted gene, 38560
10	gene	82.85125	82.85265	negative	MGI_C57BL6J_6095792	Gm47073	ENSEMBL:ENSMUSG00000112889	MGI:6095792	unclassified gene	predicted gene, 47073
10	gene	82.86663	82.86793	positive	MGI_C57BL6J_1913591	Eid3	NCBI_Gene:66341,ENSEMBL:ENSMUSG00000109864	MGI:1913591	protein coding gene	EP300 interacting inhibitor of differentiation 3
10	gene	82.89138	82.89502	positive	MGI_C57BL6J_2442548	9130221J17Rik	NA	NA	unclassified gene	RIKEN cDNA 9130221J17 gene
10	gene	82.92700	82.93464	negative	MGI_C57BL6J_5592940	Gm33781	NCBI_Gene:102636812	MGI:5592940	lncRNA gene	predicted gene, 33781
10	pseudogene	82.95433	82.95508	positive	MGI_C57BL6J_3648850	Gm4799	NCBI_Gene:216185,ENSEMBL:ENSMUSG00000071151	MGI:3648850	pseudogene	predicted gene 4799
10	gene	82.98538	83.19590	positive	MGI_C57BL6J_1927166	Chst11	NCBI_Gene:58250,ENSEMBL:ENSMUSG00000034612	MGI:1927166	protein coding gene	carbohydrate sulfotransferase 11
10	gene	83.02776	83.03169	negative	MGI_C57BL6J_3641797	Gm10773	ENSEMBL:ENSMUSG00000112084	MGI:3641797	protein coding gene	predicted gene 10773
10	gene	83.13915	83.14204	negative	MGI_C57BL6J_1916665	1700025N21Rik	ENSEMBL:ENSMUSG00000090200	MGI:1916665	lncRNA gene	RIKEN cDNA 1700025N21 gene
10	gene	83.15802	83.15813	negative	MGI_C57BL6J_5452899	Gm23122	ENSEMBL:ENSMUSG00000088270	MGI:5452899	snRNA gene	predicted gene, 23122
10	gene	83.23085	83.33833	negative	MGI_C57BL6J_2442940	Slc41a2	NCBI_Gene:338365,ENSEMBL:ENSMUSG00000034591	MGI:2442940	protein coding gene	solute carrier family 41, member 2
10	pseudogene	83.33272	83.33336	positive	MGI_C57BL6J_6095950	Gm47170	ENSEMBL:ENSMUSG00000112577	MGI:6095950	pseudogene	predicted gene, 47170
10	gene	83.33870	83.33963	positive	MGI_C57BL6J_5623607	Gm40722	NCBI_Gene:105245243	MGI:5623607	lncRNA gene	predicted gene, 40722
10	gene	83.34395	83.35139	positive	MGI_C57BL6J_5623608	Gm40723	NCBI_Gene:105245244,ENSEMBL:ENSMUSG00000112134	MGI:5623608	lncRNA gene	predicted gene, 40723
10	gene	83.36022	83.48851	positive	MGI_C57BL6J_106381	D10Wsu102e	NCBI_Gene:28109,ENSEMBL:ENSMUSG00000020255	MGI:106381	protein coding gene	DNA segment, Chr 10, Wayne State University 102, expressed
10	pseudogene	83.47800	83.48125	negative	MGI_C57BL6J_3648990	Gm8270	NCBI_Gene:102636894	MGI:3648990	pseudogene	predicted gene 8270
10	gene	83.48745	83.53415	negative	MGI_C57BL6J_2444680	Aldh1l2	NCBI_Gene:216188,ENSEMBL:ENSMUSG00000020256	MGI:2444680	protein coding gene	aldehyde dehydrogenase 1 family, member L2
10	gene	83.54375	83.59647	positive	MGI_C57BL6J_2441787	Washc4	NCBI_Gene:319277,ENSEMBL:ENSMUSG00000034560	MGI:2441787	protein coding gene	WASH complex subunit 4
10	gene	83.60003	83.64886	negative	MGI_C57BL6J_2384914	Appl2	NCBI_Gene:216190,ENSEMBL:ENSMUSG00000020263	MGI:2384914	protein coding gene	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
10	pseudogene	83.65927	83.66062	positive	MGI_C57BL6J_6096068	Gm47244	ENSEMBL:ENSMUSG00000112072	MGI:6096068	pseudogene	predicted gene, 47244
10	gene	83.72266	83.76276	positive	MGI_C57BL6J_1917034	1500009L16Rik	NCBI_Gene:69784,ENSEMBL:ENSMUSG00000087651	MGI:1917034	protein coding gene	RIKEN cDNA 1500009L16 gene
10	pseudogene	83.81016	83.81157	negative	MGI_C57BL6J_6096069	Gm47245	ENSEMBL:ENSMUSG00000112077	MGI:6096069	pseudogene	predicted gene, 47245
10	pseudogene	83.90185	83.90213	positive	MGI_C57BL6J_6096072	Gm47247	ENSEMBL:ENSMUSG00000112133	MGI:6096072	pseudogene	predicted gene, 47247
10	gene	83.92682	83.93072	positive	MGI_C57BL6J_5593078	Gm33919	NCBI_Gene:102637003	MGI:5593078	lncRNA gene	predicted gene, 33919
10	gene	83.93077	83.93353	negative	MGI_C57BL6J_5593139	Gm33980	NCBI_Gene:102637078	MGI:5593139	lncRNA gene	predicted gene, 33980
10	gene	83.93662	83.96372	negative	MGI_C57BL6J_5593202	Gm34043	NCBI_Gene:102637159	MGI:5593202	lncRNA gene	predicted gene, 34043
10	gene	83.97161	83.98720	positive	MGI_C57BL6J_5623610	Gm40725	NCBI_Gene:105245246	MGI:5623610	lncRNA gene	predicted gene, 40725
10	gene	83.99273	84.00486	negative	MGI_C57BL6J_2443595	C230099D08Rik	ENSEMBL:ENSMUSG00000111699	MGI:2443595	lncRNA gene	RIKEN cDNA C230099D08 gene
10	gene	84.02846	84.03116	positive	MGI_C57BL6J_5623611	Gm40726	NCBI_Gene:105245247	MGI:5623611	lncRNA gene	predicted gene, 40726
10	gene	84.03656	84.10088	negative	MGI_C57BL6J_5593343	Gm34184	NCBI_Gene:102637349,ENSEMBL:ENSMUSG00000111049	MGI:5593343	lncRNA gene	predicted gene, 34184
10	gene	84.06176	84.06223	positive	MGI_C57BL6J_5611136	Gm37908	ENSEMBL:ENSMUSG00000104317	MGI:5611136	unclassified gene	predicted gene, 37908
10	gene	84.08463	84.09625	positive	MGI_C57BL6J_5593272	Gm34113	NCBI_Gene:102637247,ENSEMBL:ENSMUSG00000111524	MGI:5593272	lncRNA gene	predicted gene, 34113
10	gene	84.10438	84.11042	negative	MGI_C57BL6J_5623612	Gm40727	NCBI_Gene:105245248	MGI:5623612	lncRNA gene	predicted gene, 40727
10	gene	84.19182	84.22206	negative	MGI_C57BL6J_6096082	Gm47253	ENSEMBL:ENSMUSG00000111062	MGI:6096082	lncRNA gene	predicted gene, 47253
10	pseudogene	84.30887	84.30936	positive	MGI_C57BL6J_3643901	Gm5425	NCBI_Gene:432482,ENSEMBL:ENSMUSG00000111875	MGI:3643901	pseudogene	predicted gene 5425
10	gene	84.31732	84.33575	negative	MGI_C57BL6J_5825838	Gm46201	NCBI_Gene:108167783	MGI:5825838	lncRNA gene	predicted gene, 46201
10	gene	84.37090	84.44060	negative	MGI_C57BL6J_1925226	Nuak1	NCBI_Gene:77976,ENSEMBL:ENSMUSG00000020032	MGI:1925226	protein coding gene	NUAK family, SNF1-like kinase, 1
10	gene	84.44083	84.46701	positive	MGI_C57BL6J_6097239	Gm47962	ENSEMBL:ENSMUSG00000111583	MGI:6097239	lncRNA gene	predicted gene, 47962
10	gene	84.48829	84.49768	positive	MGI_C57BL6J_1923054	4930463O16Rik	NCBI_Gene:75804,ENSEMBL:ENSMUSG00000020033	MGI:1923054	lncRNA gene	RIKEN cDNA 4930463O16 gene
10	gene	84.49887	84.49963	positive	MGI_C57BL6J_1921541	1700092E16Rik	ENSEMBL:ENSMUSG00000111487	MGI:1921541	unclassified non-coding RNA gene	RIKEN cDNA 1700092E16 gene
10	gene	84.50004	84.51710	negative	MGI_C57BL6J_5593564	Gm34405	NCBI_Gene:102637645	MGI:5593564	lncRNA gene	predicted gene, 34405
10	pseudogene	84.50203	84.50256	negative	MGI_C57BL6J_5010436	Gm18251	NCBI_Gene:100416788,ENSEMBL:ENSMUSG00000111478	MGI:5010436	pseudogene	predicted gene, 18251
10	gene	84.51805	84.52327	positive	MGI_C57BL6J_3045388	E230014E18Rik	ENSEMBL:ENSMUSG00000111514	MGI:3045388	lncRNA gene	RIKEN cDNA E230014E18 gene
10	gene	84.52630	84.53406	negative	MGI_C57BL6J_2444926	Ckap4	NCBI_Gene:216197,ENSEMBL:ENSMUSG00000046841	MGI:2444926	protein coding gene	cytoskeleton-associated protein 4
10	gene	84.54742	84.55334	negative	MGI_C57BL6J_3045387	Platr7	NCBI_Gene:442847,ENSEMBL:ENSMUSG00000097076	MGI:3045387	lncRNA gene	pluripotency associated transcript 7
10	gene	84.57232	84.57507	positive	MGI_C57BL6J_5593674	Gm34515	NCBI_Gene:102637793	MGI:5593674	lncRNA gene	predicted gene, 34515
10	gene	84.57663	84.61436	positive	MGI_C57BL6J_2444679	Tcp11l2	NCBI_Gene:216198,ENSEMBL:ENSMUSG00000020034	MGI:2444679	protein coding gene	t-complex 11 (mouse) like 2
10	gene	84.61472	84.61481	positive	MGI_C57BL6J_5455434	Gm25657	ENSEMBL:ENSMUSG00000089096	MGI:5455434	snRNA gene	predicted gene, 25657
10	gene	84.61834	84.62753	negative	MGI_C57BL6J_4936883	Gm17249	NCBI_Gene:102637873,ENSEMBL:ENSMUSG00000097309	MGI:4936883	lncRNA gene	predicted gene, 17249
10	gene	84.62229	84.72718	positive	MGI_C57BL6J_1917678	Polr3b	NCBI_Gene:70428,ENSEMBL:ENSMUSG00000034453	MGI:1917678	protein coding gene	polymerase (RNA) III (DNA directed) polypeptide B
10	gene	84.75605	84.90654	positive	MGI_C57BL6J_1918387	Rfx4	NCBI_Gene:71137,ENSEMBL:ENSMUSG00000020037	MGI:1918387	protein coding gene	regulatory factor X, 4 (influences HLA class II expression)
10	gene	84.79795	84.86329	negative	MGI_C57BL6J_5623613	Gm40728	NCBI_Gene:105245249	MGI:5623613	lncRNA gene	predicted gene, 40728
10	gene	84.81109	84.81118	negative	MGI_C57BL6J_5454003	Gm24226	ENSEMBL:ENSMUSG00000089451	MGI:5454003	snRNA gene	predicted gene, 24226
10	gene	84.91725	85.01834	positive	MGI_C57BL6J_2682307	Ric8b	NCBI_Gene:237422,ENSEMBL:ENSMUSG00000035620	MGI:2682307	protein coding gene	RIC8 guanine nucleotide exchange factor B
10	gene	84.98771	85.00365	negative	MGI_C57BL6J_5593792	Gm34633	NCBI_Gene:102637948	MGI:5593792	lncRNA gene	predicted gene, 34633
10	gene	85.09629	85.10250	negative	MGI_C57BL6J_1338765	Fhl4	NCBI_Gene:14202,ENSEMBL:ENSMUSG00000050035	MGI:1338765	protein coding gene	four and a half LIM domains 4
10	gene	85.10263	85.12062	positive	MGI_C57BL6J_2143652	Tmem263	NCBI_Gene:103266,ENSEMBL:ENSMUSG00000060935	MGI:2143652	protein coding gene	transmembrane protein 263
10	gene	85.11943	85.12807	negative	MGI_C57BL6J_1921488	Mterf2	NCBI_Gene:74238,ENSEMBL:ENSMUSG00000049038	MGI:1921488	protein coding gene	mitochondrial transcription termination factor 2
10	gene	85.13170	85.18506	negative	MGI_C57BL6J_1270841	Cry1	NCBI_Gene:12952,ENSEMBL:ENSMUSG00000020038	MGI:1270841	protein coding gene	cryptochrome 1 (photolyase-like)
10	gene	85.22094	85.26639	negative	MGI_C57BL6J_5621460	Gm38575	ENSEMBL:ENSMUSG00000111752	MGI:5621460	lncRNA gene	predicted gene, 38575
10	gene	85.28423	85.28433	negative	MGI_C57BL6J_5530774	Gm27392	ENSEMBL:ENSMUSG00000098852	MGI:5530774	miRNA gene	predicted gene, 27392
10	pseudogene	85.31347	85.31444	positive	MGI_C57BL6J_3647964	Gm8394	NCBI_Gene:666974,ENSEMBL:ENSMUSG00000050490	MGI:3647964	pseudogene	predicted gene 8394
10	gene	85.33269	85.34757	negative	MGI_C57BL6J_5593871	Gm34712	NCBI_Gene:102638057	MGI:5593871	lncRNA gene	predicted gene, 34712
10	gene	85.33390	85.33400	positive	MGI_C57BL6J_5455058	Gm25281	ENSEMBL:ENSMUSG00000087895	MGI:5455058	miRNA gene	predicted gene, 25281
10	gene	85.33901	85.33995	positive	MGI_C57BL6J_5623615	Gm40730	NCBI_Gene:105245251	MGI:5623615	lncRNA gene	predicted gene, 40730
10	gene	85.38677	85.66029	positive	MGI_C57BL6J_1921257	Btbd11	NCBI_Gene:74007,ENSEMBL:ENSMUSG00000020042	MGI:1921257	protein coding gene	BTB (POZ) domain containing 11
10	gene	85.57888	85.58399	negative	MGI_C57BL6J_5623616	Gm40731	NCBI_Gene:105245252	MGI:5623616	lncRNA gene	predicted gene, 40731
10	gene	85.69438	85.71125	negative	MGI_C57BL6J_3645890	Gm6713	NCBI_Gene:626858,ENSEMBL:ENSMUSG00000111609	MGI:3645890	protein coding gene	predicted gene 6713
10	gene	85.70768	85.71237	positive	MGI_C57BL6J_6096264	Gm47358	ENSEMBL:ENSMUSG00000111435	MGI:6096264	lncRNA gene	predicted gene, 47358
10	pseudogene	85.72661	85.73307	negative	MGI_C57BL6J_3645675	Gm6714	NCBI_Gene:626878,ENSEMBL:ENSMUSG00000112451	MGI:3645675	pseudogene	predicted gene 6714
10	pseudogene	85.73075	85.73210	negative	MGI_C57BL6J_5434381	Gm21026	NCBI_Gene:100534313,ENSEMBL:ENSMUSG00000112479	MGI:5434381	pseudogene	predicted gene, 21026
10	gene	85.73970	85.74034	negative	MGI_C57BL6J_5623617	Gm40732	NCBI_Gene:105245253	MGI:5623617	lncRNA gene	predicted gene, 40732
10	pseudogene	85.74417	85.74507	negative	MGI_C57BL6J_6096271	Gm47362	ENSEMBL:ENSMUSG00000112119	MGI:6096271	pseudogene	predicted gene, 47362
10	pseudogene	85.74540	85.74595	negative	MGI_C57BL6J_6096272	Gm47363	ENSEMBL:ENSMUSG00000112568	MGI:6096272	pseudogene	predicted gene, 47363
10	pseudogene	85.76426	85.76576	negative	MGI_C57BL6J_6096275	Gm47366	ENSEMBL:ENSMUSG00000111891	MGI:6096275	pseudogene	predicted gene, 47366
10	pseudogene	85.76459	85.76576	negative	MGI_C57BL6J_6096274	Gm47365	ENSEMBL:ENSMUSG00000111996	MGI:6096274	pseudogene	predicted gene, 47365
10	pseudogene	85.76590	85.76758	negative	MGI_C57BL6J_6096276	Gm47367	ENSEMBL:ENSMUSG00000112504	MGI:6096276	pseudogene	predicted gene, 47367
10	pseudogene	85.78530	85.79208	positive	MGI_C57BL6J_3779876	Gm9466	NCBI_Gene:669723,ENSEMBL:ENSMUSG00000112418	MGI:3779876	pseudogene	predicted gene 9466
10	pseudogene	85.78621	85.78744	positive	MGI_C57BL6J_5011797	Gm19612	NCBI_Gene:100503252,ENSEMBL:ENSMUSG00000111884	MGI:5011797	pseudogene	predicted gene, 19612
10	gene	85.80621	85.81089	negative	MGI_C57BL6J_2686405	Gm1559	ENSEMBL:ENSMUSG00000112826	MGI:2686405	lncRNA gene	predicted gene 1559
10	pseudogene	85.80767	85.82274	positive	MGI_C57BL6J_3645077	Gm6721	NCBI_Gene:626940,ENSEMBL:ENSMUSG00000112318	MGI:3645077	pseudogene	predicted gene 6721
10	gene	85.82949	85.88910	positive	MGI_C57BL6J_1914735	Pwp1	NCBI_Gene:103136,ENSEMBL:ENSMUSG00000001785	MGI:1914735	protein coding gene	PWP1 homolog, endonuclein
10	pseudogene	85.82959	85.83340	positive	MGI_C57BL6J_5011809	Gm19624	NCBI_Gene:102639184,ENSEMBL:ENSMUSG00000112326	MGI:5011809	pseudogene	predicted gene, 19624
10	pseudogene	85.84914	85.85087	positive	MGI_C57BL6J_6095684	Gm47006	ENSEMBL:ENSMUSG00000112836	MGI:6095684	pseudogene	predicted gene, 47006
10	gene	85.89196	85.91715	negative	MGI_C57BL6J_1920093	Prdm4	NCBI_Gene:72843,ENSEMBL:ENSMUSG00000035529	MGI:1920093	protein coding gene	PR domain containing 4
10	gene	85.92768	85.94621	positive	MGI_C57BL6J_1914591	Ascl4	NCBI_Gene:67341,ENSEMBL:ENSMUSG00000085111	MGI:1914591	protein coding gene	achaete-scute family bHLH transcription factor 4
10	gene	85.93864	85.95782	negative	MGI_C57BL6J_106379	Rtcb	NCBI_Gene:28088,ENSEMBL:ENSMUSG00000001783	MGI:106379	protein coding gene	RNA 2’,3’-cyclic phosphate and 5’-OH ligase
10	pseudogene	85.95496	85.95514	positive	MGI_C57BL6J_6097551	Gm48175	ENSEMBL:ENSMUSG00000112613	MGI:6097551	pseudogene	predicted gene, 48175
10	gene	85.95934	86.01189	negative	MGI_C57BL6J_3026884	Bpifc	NCBI_Gene:270757,ENSEMBL:ENSMUSG00000050108	MGI:3026884	protein coding gene	BPI fold containing family C
10	gene	86.02044	86.02233	negative	MGI_C57BL6J_3642156	A230060F14Rik	ENSEMBL:ENSMUSG00000097692	MGI:3642156	lncRNA gene	RIKEN cDNA A230060F14 gene
10	gene	86.02187	86.05187	positive	MGI_C57BL6J_1917004	Fbxo7	NCBI_Gene:69754,ENSEMBL:ENSMUSG00000001786	MGI:1917004	protein coding gene	F-box protein 7
10	gene	86.03869	86.03879	negative	MGI_C57BL6J_5454207	Gm24430	ENSEMBL:ENSMUSG00000077265	MGI:5454207	snRNA gene	predicted gene, 24430
10	gene	86.04875	86.49903	negative	MGI_C57BL6J_1351334	Syn3	NCBI_Gene:27204,ENSEMBL:ENSMUSG00000059602	MGI:1351334	protein coding gene	synapsin III
10	gene	86.09585	86.11359	positive	MGI_C57BL6J_1925420	4930486F22Rik	NCBI_Gene:78170,ENSEMBL:ENSMUSG00000112493	MGI:1925420	lncRNA gene	RIKEN cDNA 4930486F22 gene
10	gene	86.12583	86.12985	positive	MGI_C57BL6J_3801993	Gm15990	ENSEMBL:ENSMUSG00000087256	MGI:3801993	lncRNA gene	predicted gene 15990
10	gene	86.15613	86.18954	positive	MGI_C57BL6J_5594795	Gm35636	NCBI_Gene:102639289	MGI:5594795	lncRNA gene	predicted gene, 35636
10	gene	86.30037	86.34951	positive	MGI_C57BL6J_98754	Timp3	NCBI_Gene:21859,ENSEMBL:ENSMUSG00000020044	MGI:98754	protein coding gene	tissue inhibitor of metalloproteinase 3
10	gene	86.32703	86.32930	positive	MGI_C57BL6J_2443425	B930095M22Rik	NA	NA	unclassified gene	RIKEN cDNA B930095M22 gene
10	gene	86.52630	86.54187	negative	MGI_C57BL6J_3646339	Gm6729	NCBI_Gene:627035,ENSEMBL:ENSMUSG00000090816,ENSEMBL:ENSMUSG00000112586	MGI:3646339	protein coding gene	predicted gene 6729
10	pseudogene	86.55081	86.55266	negative	MGI_C57BL6J_3779991	Gm9583	NCBI_Gene:672902,ENSEMBL:ENSMUSG00000112893	MGI:3779991	pseudogene	predicted gene 9583
10	pseudogene	86.55495	86.55618	negative	MGI_C57BL6J_5434382	Gm21027	NCBI_Gene:100534314,ENSEMBL:ENSMUSG00000112115	MGI:5434382	pseudogene	predicted gene, 21027
10	pseudogene	86.56993	86.57168	positive	MGI_C57BL6J_6097960	Gm48448	ENSEMBL:ENSMUSG00000112207	MGI:6097960	pseudogene	predicted gene, 48448
10	pseudogene	86.57176	86.57297	positive	MGI_C57BL6J_6097963	Gm48450	ENSEMBL:ENSMUSG00000112579	MGI:6097963	pseudogene	predicted gene, 48450
10	pseudogene	86.57304	86.57425	positive	MGI_C57BL6J_6097964	Gm48451	ENSEMBL:ENSMUSG00000112562	MGI:6097964	pseudogene	predicted gene, 48451
10	pseudogene	86.57432	86.57553	positive	MGI_C57BL6J_6097968	Gm48454	ENSEMBL:ENSMUSG00000112325	MGI:6097968	pseudogene	predicted gene, 48454
10	pseudogene	86.57562	86.57585	positive	MGI_C57BL6J_6097974	Gm48460	ENSEMBL:ENSMUSG00000112268	MGI:6097974	pseudogene	predicted gene, 48460
10	pseudogene	86.59235	86.59366	positive	MGI_C57BL6J_5825828	Gm46191	NCBI_Gene:108167772,ENSEMBL:ENSMUSG00000112735	MGI:5825828	pseudogene	predicted gene, 46191
10	pseudogene	86.60092	86.60144	positive	MGI_C57BL6J_6097975	Gm48461	ENSEMBL:ENSMUSG00000112010	MGI:6097975	pseudogene	predicted gene, 48461
10	pseudogene	86.60157	86.60174	positive	MGI_C57BL6J_6097978	Gm48463	ENSEMBL:ENSMUSG00000112638	MGI:6097978	pseudogene	predicted gene, 48463
10	pseudogene	86.60178	86.60293	positive	MGI_C57BL6J_6097979	Gm48464	ENSEMBL:ENSMUSG00000112834	MGI:6097979	pseudogene	predicted gene, 48464
10	pseudogene	86.60301	86.60420	positive	MGI_C57BL6J_6097980	Gm48465	ENSEMBL:ENSMUSG00000111998	MGI:6097980	pseudogene	predicted gene, 48465
10	pseudogene	86.60429	86.60476	positive	MGI_C57BL6J_6097981	Gm48466	ENSEMBL:ENSMUSG00000112078	MGI:6097981	pseudogene	predicted gene, 48466
10	pseudogene	86.62065	86.62093	negative	MGI_C57BL6J_6097988	Gm48473	ENSEMBL:ENSMUSG00000112565	MGI:6097988	pseudogene	predicted gene, 48473
10	pseudogene	86.62098	86.62213	negative	MGI_C57BL6J_6097989	Gm48474	ENSEMBL:ENSMUSG00000112699	MGI:6097989	pseudogene	predicted gene, 48474
10	pseudogene	86.62226	86.62400	negative	MGI_C57BL6J_6097990	Gm48475	ENSEMBL:ENSMUSG00000112359	MGI:6097990	pseudogene	predicted gene, 48475
10	pseudogene	86.63714	86.63839	positive	MGI_C57BL6J_5012174	Gm19989	NCBI_Gene:100534315,ENSEMBL:ENSMUSG00000112282	MGI:5012174	pseudogene	predicted gene, 19989
10	pseudogene	86.64068	86.64253	positive	MGI_C57BL6J_5011061	Gm18876	NCBI_Gene:100417881,ENSEMBL:ENSMUSG00000112098	MGI:5011061	pseudogene	predicted gene, 18876
10	gene	86.65543	86.67102	positive	MGI_C57BL6J_3646116	Gm5174	NCBI_Gene:382395,ENSEMBL:ENSMUSG00000090308	MGI:3646116	protein coding gene	predicted gene 5174
10	gene	86.65740	86.67102	positive	MGI_C57BL6J_6098005	Gm48485	ENSEMBL:ENSMUSG00000112666	MGI:6098005	lncRNA gene	predicted gene, 48485
10	pseudogene	86.68552	86.69481	positive	MGI_C57BL6J_1913513	1810014B01Rik	NCBI_Gene:66263,ENSEMBL:ENSMUSG00000097412	MGI:1913513	pseudogene	RIKEN cDNA 1810014B01 gene
10	gene	86.69021	86.70551	negative	MGI_C57BL6J_98817	Hsp90b1	NCBI_Gene:22027,ENSEMBL:ENSMUSG00000020048	MGI:98817	protein coding gene	heat shock protein 90, beta (Grp94), member 1
10	gene	86.69212	86.69309	negative	MGI_C57BL6J_3708098	Gm15344	ENSEMBL:ENSMUSG00000084899	MGI:3708098	lncRNA gene	predicted gene 15344
10	gene	86.70532	86.70545	negative	MGI_C57BL6J_5455522	Gm25745	ENSEMBL:ENSMUSG00000092686	MGI:5455522	miRNA gene	predicted gene, 25745
10	gene	86.70562	86.77684	positive	MGI_C57BL6J_2387653	Ttc41	NCBI_Gene:103220,ENSEMBL:ENSMUSG00000044937	MGI:2387653	protein coding gene	tetratricopeptide repeat domain 41
10	pseudogene	86.73175	86.73239	negative	MGI_C57BL6J_101929	Fabp3-ps1	NCBI_Gene:14074,ENSEMBL:ENSMUSG00000056366	MGI:101929	pseudogene	fatty acid binding protein 3, muscle and heart, pseudogene 1
10	gene	86.76397	86.83397	positive	MGI_C57BL6J_6121566	Gm49358	ENSEMBL:ENSMUSG00000112743	MGI:6121566	protein coding gene	predicted gene, 49358
10	gene	86.77899	86.83839	positive	MGI_C57BL6J_3513266	Nt5dc3	NCBI_Gene:103466,ENSEMBL:ENSMUSG00000054027	MGI:3513266	protein coding gene	5’-nucleotidase domain containing 3
10	gene	86.83909	86.87495	positive	MGI_C57BL6J_3826557	Gm16268	ENSEMBL:ENSMUSG00000089959	MGI:3826557	lncRNA gene	predicted gene 16268
10	gene	86.84120	87.00803	negative	MGI_C57BL6J_2178743	Stab2	NCBI_Gene:192188,ENSEMBL:ENSMUSG00000035459	MGI:2178743	protein coding gene	stabilin 2
10	gene	86.90876	86.91001	positive	MGI_C57BL6J_3809105	Gm16280	ENSEMBL:ENSMUSG00000089881	MGI:3809105	lncRNA gene	predicted gene 16280
10	pseudogene	86.90948	86.91272	positive	MGI_C57BL6J_3841260	Gm16270	NCBI_Gene:100416105,ENSEMBL:ENSMUSG00000089775	MGI:3841260	pseudogene	predicted gene 16270
10	gene	86.91350	86.91468	positive	MGI_C57BL6J_1890547	Tex18	NA	NA	unclassified non-coding RNA gene	testis expressed gene 18
10	gene	86.97222	87.02801	positive	MGI_C57BL6J_3826610	Gm16271	ENSEMBL:ENSMUSG00000089656	MGI:3826610	lncRNA gene	predicted gene 16271
10	pseudogene	86.99996	87.00073	positive	MGI_C57BL6J_3826558	Gm16269	NCBI_Gene:108167826,ENSEMBL:ENSMUSG00000089666	MGI:3826558	pseudogene	predicted gene 16269
10	gene	87.01893	87.05883	negative	MGI_C57BL6J_5595966	Gm36807	NCBI_Gene:102640833	MGI:5595966	protein coding gene	predicted gene, 36807
10	gene	87.05805	87.23060	positive	MGI_C57BL6J_1923890	1700113H08Rik	NCBI_Gene:76640,ENSEMBL:ENSMUSG00000047129	MGI:1923890	protein coding gene	RIKEN cDNA 1700113H08 gene
10	gene	87.23076	87.29756	positive	MGI_C57BL6J_1922532	4930555G07Rik	ENSEMBL:ENSMUSG00000112213	MGI:1922532	lncRNA gene	RIKEN cDNA 4930555G07 gene
10	gene	87.28949	87.29183	positive	MGI_C57BL6J_3641850	Gm10764	ENSEMBL:ENSMUSG00000103862	MGI:3641850	unclassified gene	predicted gene 10764
10	gene	87.36404	87.36415	negative	MGI_C57BL6J_5452968	Gm23191	ENSEMBL:ENSMUSG00000096692	MGI:5452968	snRNA gene	predicted gene, 23191
10	gene	87.49082	87.49366	negative	MGI_C57BL6J_96919	Ascl1	NCBI_Gene:17172,ENSEMBL:ENSMUSG00000020052	MGI:96919	protein coding gene	achaete-scute family bHLH transcription factor 1
10	gene	87.50283	87.50862	negative	MGI_C57BL6J_5589074	Gm29915	NCBI_Gene:102631620	MGI:5589074	lncRNA gene	predicted gene, 29915
10	pseudogene	87.50786	87.50848	positive	MGI_C57BL6J_6097476	Gm48120	ENSEMBL:ENSMUSG00000112460	MGI:6097476	pseudogene	predicted gene, 48120
10	gene	87.52179	87.58414	positive	MGI_C57BL6J_97473	Pah	NCBI_Gene:18478,ENSEMBL:ENSMUSG00000020051	MGI:97473	protein coding gene	phenylalanine hydroxylase
10	gene	87.57144	87.57175	positive	MGI_C57BL6J_1925634	2210420L05Rik	NA	NA	unclassified gene	RIKEN cDNA 2210420L05 gene
10	pseudogene	87.68858	87.68903	positive	MGI_C57BL6J_6097580	Gm48195	ENSEMBL:ENSMUSG00000112536	MGI:6097580	pseudogene	predicted gene, 48195
10	pseudogene	87.75914	87.75957	positive	MGI_C57BL6J_5012191	Gm20006	NCBI_Gene:100504000	MGI:5012191	pseudogene	predicted gene, 20006
10	gene	87.77724	87.79837	negative	MGI_C57BL6J_5589232	Gm30073	NCBI_Gene:102631839	MGI:5589232	lncRNA gene	predicted gene, 30073
10	gene	87.82638	87.86472	negative	MGI_C57BL6J_3841250	Igf1os	NCBI_Gene:627270,ENSEMBL:ENSMUSG00000058934	MGI:3841250	antisense lncRNA gene	insulin-like growth factor 1, opposite strand
10	gene	87.82989	87.82996	negative	MGI_C57BL6J_4413968	n-TKctt21	NCBI_Gene:102467349	MGI:4413968	tRNA gene	nuclear encoded tRNA lysine 21 (anticodon TTT)
10	gene	87.85827	87.93705	positive	MGI_C57BL6J_96432	Igf1	NCBI_Gene:16000,ENSEMBL:ENSMUSG00000020053	MGI:96432	protein coding gene	insulin-like growth factor 1
10	pseudogene	87.96667	87.96802	positive	MGI_C57BL6J_98879	Tyms-ps	NCBI_Gene:22172,ENSEMBL:ENSMUSG00000112222	MGI:98879	pseudogene	thymidylate synthase, pseudogene
10	gene	87.98046	87.98422	positive	MGI_C57BL6J_6097752	Gm48306	ENSEMBL:ENSMUSG00000112183	MGI:6097752	lncRNA gene	predicted gene, 48306
10	gene	88.03822	88.03968	positive	MGI_C57BL6J_6097754	Gm48307	ENSEMBL:ENSMUSG00000112235	MGI:6097754	unclassified gene	predicted gene, 48307
10	gene	88.03822	88.03968	negative	MGI_C57BL6J_3641951	Gm10763	NA	NA	unclassified gene	predicted gene 10763
10	gene	88.06807	88.09035	negative	MGI_C57BL6J_5589392	Gm30233	NCBI_Gene:102632060	MGI:5589392	lncRNA gene	predicted gene, 30233
10	gene	88.08820	88.08982	positive	MGI_C57BL6J_6097756	Gm48308	ENSEMBL:ENSMUSG00000112932	MGI:6097756	unclassified gene	predicted gene, 48308
10	gene	88.09107	88.09238	positive	MGI_C57BL6J_97629	Pmch	NCBI_Gene:110312,ENSEMBL:ENSMUSG00000035383	MGI:97629	protein coding gene	pro-melanin-concentrating hormone
10	gene	88.09140	88.14695	negative	MGI_C57BL6J_1922567	Parpbp	NCBI_Gene:75317,ENSEMBL:ENSMUSG00000035365	MGI:1922567	protein coding gene	PARP1 binding protein
10	gene	88.13438	88.13758	negative	MGI_C57BL6J_3647484	Gm6653	NCBI_Gene:626115,ENSEMBL:ENSMUSG00000112026	MGI:3647484	unclassified gene	predicted gene 6653
10	gene	88.13592	88.13753	positive	MGI_C57BL6J_1918118	4921515L22Rik	ENSEMBL:ENSMUSG00000112406	MGI:1918118	lncRNA gene	RIKEN cDNA 4921515L22 gene
10	gene	88.14697	88.17839	positive	MGI_C57BL6J_1919964	Nup37	NCBI_Gene:69736,ENSEMBL:ENSMUSG00000035351	MGI:1919964	protein coding gene	nucleoporin 37
10	gene	88.16496	88.16507	negative	MGI_C57BL6J_5456134	Gm26357	ENSEMBL:ENSMUSG00000088843	MGI:5456134	snRNA gene	predicted gene, 26357
10	gene	88.20109	88.26082	positive	MGI_C57BL6J_1914532	Washc3	NCBI_Gene:67282,ENSEMBL:ENSMUSG00000020056	MGI:1914532	protein coding gene	WASH complex subunit 3
10	pseudogene	88.24742	88.24863	positive	MGI_C57BL6J_3648865	Gm8415	NCBI_Gene:667000	MGI:3648865	pseudogene	predicted gene 8415
10	pseudogene	88.27079	88.27325	negative	MGI_C57BL6J_5010165	Gm17980	NCBI_Gene:100416224,ENSEMBL:ENSMUSG00000112259	MGI:5010165	pseudogene	predicted gene, 17980
10	pseudogene	88.30981	88.31013	negative	MGI_C57BL6J_6097991	Gm48476	ENSEMBL:ENSMUSG00000112715	MGI:6097991	pseudogene	predicted gene, 48476
10	gene	88.32280	88.37908	negative	MGI_C57BL6J_1918962	Dram1	NCBI_Gene:71712,ENSEMBL:ENSMUSG00000020057	MGI:1918962	protein coding gene	DNA-damage regulated autophagy modulator 1
10	gene	88.35732	88.37164	positive	MGI_C57BL6J_5623619	Gm40734	NCBI_Gene:105245256	MGI:5623619	lncRNA gene	predicted gene, 40734
10	gene	88.36805	88.37913	negative	MGI_C57BL6J_5623618	Gm40733	NCBI_Gene:105245255	MGI:5623618	lncRNA gene	predicted gene, 40733
10	gene	88.37913	88.44733	positive	MGI_C57BL6J_3643902	Gnptab	NCBI_Gene:432486,ENSEMBL:ENSMUSG00000035311	MGI:3643902	protein coding gene	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
10	gene	88.37924	88.38371	negative	MGI_C57BL6J_5477040	Gm26546	ENSEMBL:ENSMUSG00000096945	MGI:5477040	lncRNA gene	predicted gene, 26546
10	gene	88.41550	88.41589	positive	MGI_C57BL6J_1925854	B430006N09Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA B430006N09 gene
10	gene	88.44424	88.44989	negative	MGI_C57BL6J_3801878	Gm16235	ENSEMBL:ENSMUSG00000087429	MGI:3801878	lncRNA gene	predicted gene 16235
10	gene	88.45274	88.50407	negative	MGI_C57BL6J_2384841	Chpt1	NCBI_Gene:212862,ENSEMBL:ENSMUSG00000060002	MGI:2384841	protein coding gene	choline phosphotransferase 1
10	gene	88.45957	88.47324	positive	MGI_C57BL6J_109542	Sycp3	NCBI_Gene:20962,ENSEMBL:ENSMUSG00000020059	MGI:109542	protein coding gene	synaptonemal complex protein 3
10	gene	88.51828	88.60524	negative	MGI_C57BL6J_1336213	Mybpc1	NCBI_Gene:109272,ENSEMBL:ENSMUSG00000020061	MGI:1336213	protein coding gene	myosin binding protein C, slow-type
10	gene	88.60247	88.60534	positive	MGI_C57BL6J_6098429	Gm48752	ENSEMBL:ENSMUSG00000112841	MGI:6098429	unclassified gene	predicted gene, 48752
10	pseudogene	88.64136	88.64221	positive	MGI_C57BL6J_3643053	Gm8435	NCBI_Gene:667046,ENSEMBL:ENSMUSG00000112231	MGI:3643053	pseudogene	predicted gene 8435
10	pseudogene	88.65011	88.65823	negative	MGI_C57BL6J_6097458	Gm48106	ENSEMBL:ENSMUSG00000112428	MGI:6097458	pseudogene	predicted gene, 48106
10	pseudogene	88.67050	88.67127	negative	MGI_C57BL6J_6097461	Gm48108	ENSEMBL:ENSMUSG00000112869	MGI:6097461	pseudogene	predicted gene, 48108
10	pseudogene	88.67302	88.67339	positive	MGI_C57BL6J_5588966	Gm29807	NCBI_Gene:101056238,ENSEMBL:ENSMUSG00000112885	MGI:5588966	pseudogene	predicted gene, 29807
10	gene	88.67477	88.68502	negative	MGI_C57BL6J_1341168	Spic	NCBI_Gene:20728,ENSEMBL:ENSMUSG00000004359	MGI:1341168	protein coding gene	Spi-C transcription factor (Spi-1/PU.1 related)
10	pseudogene	88.69101	88.70511	positive	MGI_C57BL6J_5825829	Gm46192	NCBI_Gene:108167773,ENSEMBL:ENSMUSG00000111919	MGI:5825829	pseudogene	predicted gene, 46192
10	gene	88.71001	88.71013	negative	MGI_C57BL6J_4421927	n-R5s79	ENSEMBL:ENSMUSG00000065005	MGI:4421927	rRNA gene	nuclear encoded rRNA 5S 79
10	pseudogene	88.71565	88.71609	negative	MGI_C57BL6J_6097511	Gm48144	ENSEMBL:ENSMUSG00000112467	MGI:6097511	pseudogene	predicted gene, 48144
10	pseudogene	88.72954	88.73110	negative	MGI_C57BL6J_3643371	Gm4925	NCBI_Gene:237433,ENSEMBL:ENSMUSG00000069540	MGI:3643371	pseudogene	predicted gene 4925
10	gene	88.73086	88.74409	positive	MGI_C57BL6J_99436	Arl1	NCBI_Gene:104303,ENSEMBL:ENSMUSG00000060904	MGI:99436	protein coding gene	ADP-ribosylation factor-like 1
10	gene	88.74661	88.82681	negative	MGI_C57BL6J_1917933	Utp20	NCBI_Gene:70683,ENSEMBL:ENSMUSG00000004356	MGI:1917933	protein coding gene	UTP20 small subunit processome component
10	gene	88.87460	88.87580	negative	MGI_C57BL6J_1924528	9430024C03Rik	NA	NA	unclassified gene	RIKEN cDNA 9430024C03 gene
10	gene	88.88599	88.92951	positive	MGI_C57BL6J_2384916	Slc5a8	NCBI_Gene:216225,ENSEMBL:ENSMUSG00000020062	MGI:2384916	protein coding gene	solute carrier family 5 (iodide transporter), member 8
10	gene	88.94893	89.34508	negative	MGI_C57BL6J_2443344	Ano4	NCBI_Gene:320091,ENSEMBL:ENSMUSG00000035189	MGI:2443344	protein coding gene	anoctamin 4

#} else {
#  print(paste0("There are too many peaks (",nrow(peaks)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
#}

R/qtl

scanone

gm

Object of class cross2 (crosstype "bc")

Total individuals              268
No. genotyped individuals      268
No. phenotyped individuals     268
No. with both geno & pheno     268

No. phenotypes                   1
No. covariates                   7
No. phenotype covariates         0

No. chromosomes                 20
Total markers                26139

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2336 2342 1589 1661 1535 1681 1450 1438 1654  947 1651 1107 1359 1396  945  728 
  17   18   19    X 
 303  747  903  367 

#detach("package:qtl2", unload=TRUE)
#library(qtl)

cross <- qtl::read.cross("csv", file = "data/ici.vs.eoi_gm_qtl_snpsqc_5.batches.csv",alleles=c("A","B"))

 --Read the following data:
     268  individuals
     26139  markers
     3  phenotypes
 --Cross type: bc 

cross <- qtl::jittermap(cross)

summary(cross)

    Backcross

    No. individuals:    268 

    No. phenotypes:     3 
    Percent phenotyped: 100 100 100 

    No. chromosomes:    20 
        Autosomes:      1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 
        X chr:          X 

    Total markers:      26139 
    No. markers:        2336 2342 1589 1661 1535 1681 1450 1438 1654 947 1651 
                        1107 1359 1396 945 728 303 747 903 367 
    Percent genotyped:  99.6 
    Genotypes (%):    
          Autosomes:    AA:50.7  AB:49.3 
       X chromosome:    AA:53.4  AB:46.6 

cross.probs <- qtl::calc.genoprob(cross)

print("method == hk")

[1] "method == hk"

scanone.hk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.EOI" , model="binary", method="hk")
operm.hk <- qtl::scanone(cross.probs, method = "hk", pheno.col="ICI.vs.EOI", n.perm = 1000, perm.Xsp = TRUE, model="binary", verbose=FALSE)
plot(operm.hk)

print(summary(operm.hk, alpha=c(0.01,  0.05, 0.1)))

Autosome LOD thresholds (1000 permutations)
     lod
1%  3.71
5%  3.15
10% 2.85

X chromosome LOD thresholds (18072 permutations)
     lod
1%  3.75
5%  3.10
10% 2.70

#plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- maxlod(out) # overall maximum LOD score
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]"))  
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- 11
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]\n(using same scale as pbs vs ici for easier comparison)"))
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

print(as.data.frame(summary(scanone.hk, perms=operm.hk, pvalues=TRUE, format="allpeaks")))

            chr       pos        lod       pval
UNC228500     1  6.331092  2.4664717 0.20773236
UNCHS006679   2 62.544508  1.0546110 0.99306507
UNCHS008487   3 18.749257 10.5377800 0.00000000
UNCHS013118   4 73.316266  3.6349477 0.01476893
UNCHS015701   5 62.314167  0.4411179 1.00000000
UNCHS017627   6 31.742474  0.8630814 1.00000000
JAX00633185   7  9.963095  1.2670299 0.95853145
UNC14996716   8 35.278790  0.6836459 1.00000000
UNCHS025371   9 25.669456  1.8531144 0.60169633
JAX00292927  10 38.425403  3.5211926 0.01687784
UNC20107061  11 55.108249  1.4360027 0.89609786
UNC20614824  12  5.227034  0.4068684 1.00000000
UNCHS036289  13 34.372674  0.5889933 1.00000000
JAX00054074  14 34.625639  1.6936808 0.72624184
JAX00063707  15 34.257390  0.4243336 1.00000000
UNC27106521  16 41.370466  0.9985213 0.99627056
JAX00445197  17 41.372029  1.4505137 0.89234558
UNCHS046337  18 29.400344  0.5695553 1.00000000
UNC29996617  19 13.259147  0.4989614 1.00000000
JAX00186893   X 76.646358  0.6278730 0.99999298

print("all peaks with a p-value less or equal to 0.05 (suggestive)")

[1] "all peaks with a p-value less or equal to 0.05 (suggestive)"

print(as.data.frame(summary(scanone.hk, perms=operm.hk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

            chr      pos       lod       pval
UNCHS008487   3 18.74926 10.537780 0.00000000
UNCHS013118   4 73.31627  3.634948 0.01476893
JAX00292927  10 38.42540  3.521193 0.01687784

#print("method == ehk")

#scanone.ehk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.EOI" , model="binary", method="ehk")
#operm.ehk <- qtl::scanone(cross.probs, method = "ehk", pheno.col="ICI.vs.EOI", n.perm = 1000, perm.Xsp = TRUE, model="binary", verbose=FALSE)
#plot(operm.ehk)
#print(summary(operm.ehk, alpha=c(0.01,  0.05, 0.1)))

#plot(scanone.ehk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.1, col = 'purple')

#print(as.data.frame(summary(scanone.ehk)))
#print(as.data.frame(summary(scanone.ehk, perms=operm.ehk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

Multi-qtl (genoprobs, haley knott regression method)

gm

Object of class cross2 (crosstype "bc")

Total individuals              268
No. genotyped individuals      268
No. phenotyped individuals     268
No. with both geno & pheno     268

No. phenotypes                   1
No. covariates                   7
No. phenotype covariates         0

No. chromosomes                 20
Total markers                26139

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2336 2342 1589 1661 1535 1681 1450 1438 1654  947 1651 1107 1359 1396  945  728 
  17   18   19    X 
 303  747  903  367 

detach("package:qtl2", unload=TRUE)
library(qtl)

cross <- qtl::read.cross("csv", file = "data/ici.vs.eoi_gm_qtl_snpsqc_5.batches.csv",alleles=c("A","B"))

 --Read the following data:
     268  individuals
     26139  markers
     3  phenotypes
 --Cross type: bc 

cross <- qtl::jittermap(cross)

fitqtl.d1 = cross

#qc <- c(3, 4)
#qp <- c(29.03815, 69.1085558)

qc <- c(peaks$chr[1], peaks$chr[2], peaks$chr[3])
qp <- c(peaks$pos[1], peaks$pos[2], peaks$pos[3])

#fitqtl.d1 <- subset(fitqtl.d1, chr=qc)
  
fitqtl.d1 <- qtl::calc.genoprob(fitqtl.d1)
  
qtl <- qtl::makeqtl(fitqtl.d1, qc, qp, what="prob")

# fit an additive QTL model
lod.add.1 <- qtl::fitqtl(fitqtl.d1, pheno.col="ICI.vs.EOI", qtl, formula=y~Q1+Q2+Q3,method="hk", model="binary", get.ests=FALSE)
print(summary(lod.add.1))

        fitqtl summary

Method: Haley-Knott regression 
Model:  binary phenotype
Number of observations : 268 

Full model result
----------------------------------  
Model formula: y ~ Q1 + Q2 + Q3 

      df      LOD     %var Pvalue(Chi2)
Model  3 16.85989 25.15205 1.110223e-16


Drop one QTL at a time ANOVA table: 
----------------------------------  
        df    LOD   %var Pvalue(Chi2)    
3@18.7   1 10.282 14.465     5.93e-12 ***
4@73.3   1  2.452  3.221     0.000779 ***
10@38.4  1  3.490  4.626     6.09e-05 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

capture.output(summary(lod.add.1),file="data/ici.vs.eoi_fitqtl_peaks_additive_snpsqc_5.batches.txt", quote=F)

# fit model with 2 interacting QTLs interacting
lod.1 <- qtl::fitqtl(fitqtl.d1, pheno.col="ICI.vs.EOI", qtl, formula=y~Q1*Q2*Q3, method="hk", model="binary", get.ests=FALSE)
print(summary(lod.1))

        fitqtl summary

Method: Haley-Knott regression 
Model:  binary phenotype
Number of observations : 268 

Full model result
----------------------------------  
Model formula: y ~ Q1 + Q2 + Q3 + Q1:Q2 + Q1:Q3 + Q2:Q3 + Q1:Q2:Q3 

      df      LOD     %var Pvalue(Chi2)
Model  7 18.11078 26.74371 2.775558e-15


Drop one QTL at a time ANOVA table: 
----------------------------------  
                      df      LOD   %var Pvalue(Chi2)    
3@18.7                 4 10.24010 14.094     1.41e-09 ***
4@73.3                 4  3.29025  4.261     0.004396 ** 
10@38.4                4  4.70292  6.166     0.000234 ***
3@18.7:4@73.3          2  0.09654  0.122     0.800681    
3@18.7:10@38.4         2  0.37515  0.474     0.421547    
4@73.3:10@38.4         2  0.98799  1.254     0.102803    
3@18.7:4@73.3:10@38.4  1  0.02854  0.036     0.716959    
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

capture.output(summary(lod.1),file="data/ici.vs.eoi_fitqtl_peaks_interacting_snpsqc_5.batches.txt", quote=F)


# fit the model including sex as an interacting covariate
Sex <- data.frame(Sex=qtl::pull.pheno(fitqtl.d1, "sex"))

# additive model
lod.sex.add.1 <- qtl::fitqtl(fitqtl.d1, pheno.col="ICI.vs.EOI", qtl, formula=y~Q1+Q2+Q3+Sex, cov=Sex, method="hk", model="binary", get.ests=FALSE)
print(summary(lod.sex.add.1))

        fitqtl summary

Method: Haley-Knott regression 
Model:  binary phenotype
Number of observations : 268 

Full model result
----------------------------------  
Model formula: y ~ Q1 + Q2 + Q3 + Sex 

      df      LOD     %var Pvalue(Chi2)
Model  4 16.85989 25.15205 5.551115e-16


Drop one QTL at a time ANOVA table: 
----------------------------------  
        df    LOD   %var Pvalue(Chi2)    
3@18.7   1 10.282 14.465     5.93e-12 ***
4@73.3   1  2.452  3.221     0.000779 ***
10@38.4  1  3.490  4.626     6.09e-05 ***
Sex      1  0.000  0.000     1.000000    
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

capture.output(summary(lod.sex.add.1),file="data/ici.vs.eoi_fitqtl_peaks_sex_additive_snpsqc_5.batches.txt", quote=F)

#interactive model

lod.sex.1 <- qtl::fitqtl(fitqtl.d1, pheno.col="ICI.vs.EOI", qtl, formula=y~Q1*Q2*Q3*Sex, cov=Sex, method="hk", model="binary", get.ests=FALSE)
print(summary(lod.sex.1))

        fitqtl summary

Method: Haley-Knott regression 
Model:  binary phenotype
Number of observations : 268 

Full model result
----------------------------------  
Model formula: y ~ Q1 + Q2 + Q3 + Sex + Q1:Q2 + Q1:Q3 + Q1:Sex + Q2:Q3 + Q2:Sex 
                    + Q3:Sex + Q1:Q2:Q3 + Q1:Q2:Sex + Q1:Q3:Sex + Q2:Q3:Sex + 
                    Q1:Q2:Q3:Sex 

      df      LOD     %var Pvalue(Chi2)
Model 15 18.11078 26.74371 1.657829e-11


Drop one QTL at a time ANOVA table: 
----------------------------------  
                          df      LOD   %var Pvalue(Chi2)    
3@18.7                     8 10.24010 14.094     1.43e-07 ***
4@73.3                     8  3.29025  4.261      0.05625 .  
10@38.4                    8  4.70292  6.166      0.00559 ** 
Sex                        8  0.00000  0.000      1.00000    
3@18.7:4@73.3              4  0.09654  0.122      0.97867    
3@18.7:10@38.4             4  0.37515  0.474      0.78569    
3@18.7:Sex                 4  0.00000  0.000      1.00000    
4@73.3:10@38.4             4  0.98799  1.254      0.33667    
4@73.3:Sex                 4  0.00000  0.000      1.00000    
10@38.4:Sex                4  0.00000  0.000      1.00000    
3@18.7:4@73.3:10@38.4      2  0.02854  0.036      0.93640    
3@18.7:4@73.3:Sex          2  0.00000  0.000      1.00000    
3@18.7:10@38.4:Sex         2  0.00000  0.000      1.00000    
4@73.3:10@38.4:Sex         2  0.00000  0.000      1.00000    
3@18.7:4@73.3:10@38.4:Sex  1  0.00000  0.000      1.00000    
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

capture.output(summary(lod.sex.1),file="data/ici.vs.eoi_fitqtl_peaks_sex_interacting_snpsqc_5.batches.txt", quote=F)

#detach("package:qtl", unload=TRUE)
#library(qtl2)

Session information

R version 3.6.2 (2019-12-12)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Catalina 10.15.7

Matrix products: default
BLAS:   /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib

locale:
[1] en_AU.UTF-8/en_AU.UTF-8/en_AU.UTF-8/C/en_AU.UTF-8/en_AU.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] qtl_1.46-2        abind_1.4-5       reshape2_1.4.4    ggplot2_3.3.5    
 [5] tibble_3.1.2      psych_2.0.7       readxl_1.3.1      cluster_2.1.0    
 [9] dplyr_1.0.8       optparse_1.6.6    rhdf5_2.28.1      mclust_5.4.6     
[13] tidyr_1.0.2       data.table_1.14.0 knitr_1.33        kableExtra_1.1.0 
[17] workflowr_1.6.2  

loaded via a namespace (and not attached):
 [1] httr_1.4.1        bit64_4.0.5       viridisLite_0.4.0 assertthat_0.2.1 
 [5] highr_0.9         blob_1.2.1        cellranger_1.1.0  yaml_2.2.1       
 [9] pillar_1.6.1      RSQLite_2.2.7     backports_1.2.1   lattice_0.20-38  
[13] glue_1.4.2        digest_0.6.27     promises_1.1.0    rvest_0.3.5      
[17] colorspace_2.0-2  htmltools_0.5.1.1 httpuv_1.5.2      plyr_1.8.6       
[21] pkgconfig_2.0.3   purrr_0.3.4       scales_1.1.1      webshot_0.5.2    
[25] getopt_1.20.3     later_1.0.0       git2r_0.26.1      generics_0.0.2   
[29] ellipsis_0.3.2    cachem_1.0.5      withr_2.4.2       cli_3.0.0        
[33] mnormt_1.5-7      magrittr_2.0.1    crayon_1.4.1      memoise_2.0.0    
[37] evaluate_0.14     fs_1.4.1          fansi_0.5.0       nlme_3.1-142     
[41] xml2_1.3.1        tools_3.6.2       hms_0.5.3         lifecycle_1.0.1  
[45] stringr_1.4.0     Rhdf5lib_1.6.3    munsell_0.5.0     compiler_3.6.2   
[49] rlang_1.0.2       grid_3.6.2        rstudioapi_0.13   rmarkdown_2.1    
[53] gtable_0.3.0      DBI_1.1.1         R6_2.5.0          fastmap_1.1.0    
[57] bit_4.0.4         utf8_1.2.1        rprojroot_1.3-2   readr_1.3.1      
[61] stringi_1.7.2     parallel_3.6.2    Rcpp_1.0.7        vctrs_0.3.8      
[65] tidyselect_1.1.2  xfun_0.24