QTL Analysis - binary [ICI vs PBS] (conditioning on eoi vs. ici peaks)

workflowr

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Last updated: 2022-07-11

Checks: 5 2

Knit directory: Serreze-T1D_Workflow/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

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Session information: recorded

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File paths: absolute

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/Users/corneb/Documents/MyJax/CS/Projects/Serreze/qc/workflowr/Serreze-T1D_Workflow	.

Repository version: a8c2d1a

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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008215_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008215_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008219_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008219_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008229_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008229_lod.drop-1.5_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008234_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008242_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008260_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008260_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008271_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008271_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008281_lod.drop-1.5_5.batches_mis.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008286_lod.drop-1.5_5.batches_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008338_lod.drop-1.5_5.batches_mis.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008363_lod.drop-1.5_5.batches_mis.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008379_lod.drop-1.5_5.batches_mis.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008409_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008432_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008511_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008511_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008609_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008613_lod.drop-1.5_5.batches_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008614_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008627_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008659_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008725_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008815_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008815_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008815_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009066_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009067_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009068_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009112_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009224_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009224_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009383_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009383_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009693_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS009821_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCJPD001170_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCJPD001170_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCJPD001198_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCJPD001198_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCJPD001276_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-sanger2496q_lod.drop-1.5_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-sanger2496q_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-4_peak.marker-UNC8250659_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-4_peak.marker-UNC8439633_lod.drop-1.5_snpsqc_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-4_peak.marker-UNC8439633_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-4_peak.marker-UNCHS012955_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-6_peak.marker-UNC11108920_lod.drop-1.5_snpsqc_5.batches.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-6_peak.marker-UNC11108920_lod.drop-1.5_snpsqc_5.batches_mis.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-7_peak.marker-UNCHS020066_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-7_peak.marker-UNCHS020066_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-7_peak.marker-UNCHS020066_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-7_peak.marker-UNCHS020066_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-8_peak.marker-UNC15524531_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-8_peak.marker-UNC15524531_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-8_peak.marker-UNC15524531_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-8_peak.marker-UNC15524531_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-9_peak.marker-UNC17203597_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-9_peak.marker-UNC17203597_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-X_peak.marker-UNCHS048314_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-X_peak.marker-UNCHS048314_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-X_peak.marker-UNCHS048314_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-X_peak.marker-UNCHS048314_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-JAX00020646_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-JAX00292499_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-JAX00292927_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-JAX00292927_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-JAX00294019_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18216614_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18240977_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18311938_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18311938_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18311938_lod.drop-1.5_snpsqc_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18311938_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18343181_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18363544_lod.drop-1.5_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18363544_lod.drop-1.5_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18363544_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNC18376338_lod.drop-1.5_snpsqc_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNCHS028236_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNCHS028236_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNCHS028536_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-10_peak.marker-UNCHS028536_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-11_peak.marker-UNC19970181_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-11_peak.marker-UNC19970181_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-11_peak.marker-UNC20090524_lod.drop-1.5_snpsqc_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-12_peak.marker-ICR499_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-12_peak.marker-ICR499_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-12_peak.marker-ICR499_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-13_peak.marker-UNCHS036773_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-13_peak.marker-UNCHS036773_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-14_peak.marker-UNC24056202_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-14_peak.marker-UNC24056202_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-15_peak.marker-UNC26070435_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-15_peak.marker-UNC26070435_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-17_peak.marker-UNCHS044241_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_genes_chr-17_peak.marker-UNCHS044241_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
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    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_genes_chr-X_peak.marker-UNCHS048314_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_sample.genos_marker.freq_low.geno.freq.removed.csv
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    Untracked:  data/mean.differences_group_ici.vs.pbs_sample.genos_marker.freq_low.geno.freq.removed_5.batches_mis.csv
    Untracked:  data/mean.differences_group_ici.vs.pbs_sample.genos_marker.freq_low.geno.freq.removed_sample.outliers.removed_5.batches.csv
    Untracked:  data/mean.differences_group_ici.vs.pbs_sample.genos_marker.freq_low.geno.freq.removed_sample.outliers.removed_5.batches_mis.csv
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    Untracked:  data/percent_missing_marker_5.batches.RData
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Unstaged changes:
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici-early.vs.pbs_5.batches.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici-early.vs.pbs_5.batches_mis.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici-early.vs.pbs_snpsqc_5.batches.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici-early.vs.pbs_snpsqc_5.batches_mis.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici-early.vs.pbs_snpsqc_dis_no-x_updated_5.batches.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici-early.vs.pbs_snpsqc_dis_no-x_updated_5.batches_mis.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici.vs.eoi_snpsqc_dis_no-x_updated.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici.vs.pbs_snpsqc_dis_no-x_updated.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/genotype.frequencies_ici.vs.eoi_5.batches.Rmd
    Modified:   analysis/genotype.frequencies_ici.vs.eoi_5.batches_mis.Rmd
    Modified:   analysis/genotype.frequencies_ici.vs.pbs_5.batches.Rmd
    Modified:   analysis/genotype.frequencies_ici.vs.pbs_5.batches_mis.Rmd
    Modified:   analysis/index_5.batches.Rmd
    Modified:   analysis/index_5.batches_additional.Rmd

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

---

There are no past versions. Publish this analysis with wflow_publish() to start tracking its development.

---

Loading Data

We will load the data and subset indivials out that are in the groups of interest. We will create a binary phenotype from this (PBS ==0, ICI == 1).

load("data/gm_allqc_5.batches_mis.RData")

#gm_allqc
gm=gm_allqc
gm

Object of class cross2 (crosstype "bc")

Total individuals               308
No. genotyped individuals       308
No. phenotyped individuals      308
No. with both geno & pheno      308

No. phenotypes                    1
No. covariates                    6
No. phenotype covariates          0

No. chromosomes                  20
Total markers                131356

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
9956 9987 7848 7586 7609 7736 7399 6458 6713 6385 7143 6110 6082 5966 5346 5015 
  17   18   19    X 
5080 4605 3562 4770 

#pr <- readRDS("data/serreze_probs_allqc_5.batches_mis.rds")
#pr <- readRDS("data/serreze_probs.rds")

##extracting animals with ici and pbs group status
miceinfo <- gm$covar[gm$covar$group == "PBS" | gm$covar$group == "ICI",]
table(miceinfo$group)

ICI PBS 
104  34 

mice.ids <- rownames(miceinfo)

gm <- gm[mice.ids]
gm

Object of class cross2 (crosstype "bc")

Total individuals               138
No. genotyped individuals       138
No. phenotyped individuals      138
No. with both geno & pheno      138

No. phenotypes                    1
No. covariates                    6
No. phenotype covariates          0

No. chromosomes                  20
Total markers                131356

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
9956 9987 7848 7586 7609 7736 7399 6458 6713 6385 7143 6110 6082 5966 5346 5015 
  17   18   19    X 
5080 4605 3562 4770 

#pr.qc <- pr
#for (i in 1:20){pr.qc[[i]] = pr.qc[[i]][mice.ids,,]}

#bin_pheno <- NULL
#bin_pheno$PBS <- ifelse(gm$covar$group == "PBS", 1, 0)
#bin_pheno$ICI <- ifelse(gm$covar$group == "ICI", 1, 0)
#bin_pheno <- as.data.frame(bin_pheno)
#rownames(bin_pheno) <- rownames(gm$covar)

gm$covar$ICI.vs.PBS <- ifelse(gm$covar$group == "PBS", 0, 1)
gm.full <- gm

g.covar <- read.csv("/Users/corneb/Documents/MyJax/CS/Projects/Serreze/haplotype.reconstruction/output_5.batches/sample_geno_AHB.csv")
colnames(g.covar) <- gsub("\\.","-", colnames(g.covar))
rownames(g.covar) <- g.covar$marker
#g.covar <- g.covar[-1]
mar.covar <- g.covar[g.covar$marker == "UNCHS008487"| g.covar$marker == "UNC8250659"| g.covar$marker == "UNC18240977",]
mar.covar <- mar.covar[-1]
mar.covar[mar.covar=='A'] <- 0
mar.covar[mar.covar=='H'] <- 1
mar.covar[mar.covar=='B'] <- 2
mar.covar[mar.covar=='-'] <- ''
#mar.covar <- pull_markers(gm, c("UNCHS008487", "UNC8250659", "UNC18240977"))
mar.covar.g <- t(mar.covar)
mar.covar.g <- as.data.frame(mar.covar.g)

covars <- merge(gm$covar, mar.covar.g, by='row.names', sort=F)
table(covars$group)

ICI PBS 
104  34 

rownames(covars) <- covars$Row.names
covars <- covars[-1]

##removing problmetic marker

gm <- drop_markers(gm, "UNCHS013106")

markers <- marker_names(gm)
gmapdf <- read.csv("/Users/corneb/Documents/MyJax/CS/Projects/Serreze/haplotype.reconstruction/output_5.batches/genetic_map.csv")
pmapdf <- read.csv("/Users/corneb/Documents/MyJax/CS/Projects/Serreze/haplotype.reconstruction/output_5.batches/physical_map.csv")
#mapdf <- merge(gmapdf,pmapdf, by=c("marker","chr"), all=T)
#rownames(mapdf) <- mapdf$marker
#mapdf <- mapdf[markers,]
#names(mapdf) <- c('marker','chr','gmapdf','pmapdf')
#mapdfnd <- mapdf[!duplicated(mapdf[c(2:3)]),]

pr.qc <- calc_genoprob(gm)

gm

Object of class cross2 (crosstype "bc")

Total individuals               138
No. genotyped individuals       138
No. phenotyped individuals      138
No. with both geno & pheno      138

No. phenotypes                    1
No. covariates                    7
No. phenotype covariates          0

No. chromosomes                  20
Total markers                131355

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
9956 9987 7848 7585 7609 7736 7399 6458 6713 6385 7143 6110 6082 5966 5346 5015 
  17   18   19    X 
5080 4605 3562 4770 

Conditionaing on eoi vs. ici chr 3 peak (UNCHS008487) & chr 4 peak (UNC8250659)

Genome-wide scan

Genome-wide scan

Xcovar <- get_x_covar(gm)
addcovar = model.matrix(~UNCHS008487+UNC8250659, data = covars)[,-1]

#K <- calc_kinship(pr.qc, type = "loco")
#heatmap(K[[1]])
#K.overall <- calc_kinship(pr.qc, type = "overall")
#heatmap(K.overall)
kinship <- calc_kinship(pr.qc)
heatmap(kinship)

#operm <- scan1perm(pr.qc, gm$covar$phenos, Xcovar=Xcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, addcovar = addcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, n_perm=2000)
operm <- scan1perm(pr.qc, gm$covar["ICI.vs.PBS"], model="binary", n_perm=10, perm_Xsp=TRUE, chr_lengths=chr_lengths(gm$gmap), addcovar = addcovar)

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))
names(summary_table) <- c("autosomes","X")
summary_table$significance.level <- rownames(summary_table)

rownames(summary_table) <- NULL

summary_table[c(3,1:2)] %>%
  kable(escape = F,align = c("ccc")) %>%
  kable_styling("striped", full_width = T) %>%
  column_spec(1, bold=TRUE)

significance.level	autosomes	X
0.01	4.560891	4.967104
0.05	4.090871	4.267473
0.1	3.501885	3.352574

The figures below show QTL maps for each phenotype

out <- scan1(pr.qc, gm$covar["ICI.vs.PBS"], Xcovar=Xcovar, model="binary", addcovar = addcovar)

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))

plot_lod<-function(out,map){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    ##legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- 14 # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    ##legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM] \n(using same scale as eoi  vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm, alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()
  }
}

plot_lod(out,gm$gmap)

LOD peaks

The table below shows QTL peaks associated with the phenotype. We use the 95% threshold from the permutations to find peaks.

Centimorgan (cM)

peaks <- find_peaks(out, gm$gmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)

if(nrow(peaks) >0){
peaks$marker <- find_marker(gm$gmap, chr=peaks$chr,pos=peaks$pos)
names(peaks)[2] <- c("phenotype")
peaks <- peaks[-1]

rownames(peaks) <- NULL
print(kable(peaks, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

#plot only peak chromosomes

plot_lod_chr<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    
    ymx <- 14
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]\n(using same scale as eoi vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

  }
}


for(i in unique(peaks$chr)){
#for (i in 1:nrow(peaks)){
  #plot_lod_chr(out,gm$gmap, peaks$chr[i])
  plot_lod_chr(out,gm$gmap, i)
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 4.09087045591796 [autosomes]/4.26747341521973 [x-chromosome]”

Megabase (MB)

print("peaks in MB positions")

[1] “peaks in MB positions”

peaks_mba <- find_peaks(out, gm$pmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)

if(nrow(peaks) >0){
peaks_mba$marker <- find_marker(gm$pmap, chr=peaks_mba$chr,pos=peaks_mba$pos)
names(peaks_mba)[2] <- c("phenotype")
peaks_mba <- peaks_mba[-1]

#peaks_mbl <- list()
##corresponding info in Mb
#for(i in 1:nrow(peaks)){
#  #lodindex <- peaks$lodindex[i]
#  phenotype <- peaks$phenotype[i]
#  chr <- as.character(peaks$chr[i])
#  lod <- peaks$lod[i]
#  mark <- peaks$marker[i]
#  pos <- mapdf[mapdf$marker==mark,]$pmapdf
#  ci_lo <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_lo[i] & mapdfnd$chr == peaks$chr[i])]
#  ci_hi <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_hi[i] & mapdfnd$chr == peaks$chr[i])]
#  peaks_mb=as.data.frame(cbind(phenotype, chr, pos, lod, ci_lo, ci_hi, mark))
#  names(peaks_mb)[7] <- c("marker")
#  peaks_mbl[[i]] <- peaks_mb
#}
#peaks_mba2 <- do.call(rbind, peaks_mbl)
#peaks_mba2 <- as.data.frame(peaks_mba)
#peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")] <- sapply(peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")], as.numeric)

rownames(peaks_mba) <- NULL
print(kable(peaks_mba, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

plot_lod_chr_mb<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    ymx <- 14
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]\n(using same scale as eoi vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')


  }
}

for(i in unique(peaks_mba$chr)){
#for (i in 1:nrow(peaks_mba)){
  #plot_lod_chr_mb(out,gm$pmap, peaks_mba$chr[i])
  plot_lod_chr_mb(out,gm$pmap,i)
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 4.09087045591796 [autosomes]/4.26747341521973 [x-chromosome]”

QTL effects

For each peak LOD location we give a list of gene

query_variants <- create_variant_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/cc_variants.sqlite")
query_genes <- create_gene_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/mouse_genes_mgi.sqlite")

if(nrow(peaks) >0){
for (i in 1:nrow(peaks)){
#for (i in 1:1){
  #Plot 1
  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], gm$covar[peaks$phenotype[i]], addcovar = addcovar)
  blup_sub <- scan1blup(pr_sub[,chr], gm$covar[peaks$phenotype[i]], addcovar = addcovar)

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.pbs_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_5.batches_mis_conditional_2-peaks-chr3-4.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM])")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i], "; pos: ", peaks$pos[i], "cM / ",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM])")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM])")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.pbs_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_5.batches_mis_conditional_2-peaks-chr3-4.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))

  #table
  

}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 4.09087045591796 [autosomes]/4.26747341521973 [x-chromosome]”

R/qtl

scanone

gm

Object of class cross2 (crosstype "bc")

Total individuals               138
No. genotyped individuals       138
No. phenotyped individuals      138
No. with both geno & pheno      138

No. phenotypes                    1
No. covariates                    7
No. phenotype covariates          0

No. chromosomes                  20
Total markers                131355

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
9956 9987 7848 7585 7609 7736 7399 6458 6713 6385 7143 6110 6082 5966 5346 5015 
  17   18   19    X 
5080 4605 3562 4770 

#detach("package:qtl2", unload=TRUE)
#library(qtl)

cross <- qtl::read.cross("csv", file = "data/ici.vs.pbs_gm_qtl_5.batches_mis_conditional_2-peaks-chr3-4.csv",alleles=c("A","B"))

 --Read the following data:
     138  individuals
     131355  markers
     5  phenotypes
 --Cross type: bc 

cross <- qtl::jittermap(cross)

summary(cross)

    Backcross

    No. individuals:    138 

    No. phenotypes:     5 
    Percent phenotyped: 100 100 100 99.3 98.6 

    No. chromosomes:    20 
        Autosomes:      1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 
        X chr:          X 

    Total markers:      131355 
    No. markers:        9956 9987 7848 7585 7609 7736 7399 6458 6713 6385 7143 
                        6110 6082 5966 5346 5015 5080 4605 3562 4770 
    Percent genotyped:  99.5 
    Genotypes (%):    
          Autosomes:    AA:88.1  AB:11.9 
       X chromosome:    AA:93.9  AB:6.1  

cross.probs <- qtl::calc.genoprob(cross)

print("method == hk")

[1] "method == hk"

add.covars = qtl::pull.pheno(cross.probs, c("UNCHS008487","UNC8250659"))

scanone.hk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.PBS" , model="binary", method="hk", addcovar = add.covars)
operm.hk <- qtl::scanone(cross.probs, method = "hk", pheno.col="ICI.vs.PBS", n.perm = 10, perm.Xsp = TRUE, model="binary", verbose=FALSE, addcovar = add.covars)
plot(operm.hk)

print(summary(operm.hk, alpha=c(0.01,  0.05, 0.1)))

Autosome LOD thresholds (10 permutations)
     lod
1%  4.21
5%  3.88
10% 3.47

X chromosome LOD thresholds (182 permutations)
     lod
1%  3.17
5%  3.17
10% 3.16

#plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- maxlod(out) # overall maximum LOD score
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]")) 
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- 14
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]\n(using same scale as ici vs. eoi for easier comparison)"))
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

print(as.data.frame(summary(scanone.hk, perms=operm.hk, pvalues=TRUE, format="allpeaks")))

            chr       pos      lod      pval
UNC1197721    1 47.673577 1.868502 1.0000000
UNCHS005266   2 40.908610 1.873368 1.0000000
UNC6045859    3 50.620447 1.870152 1.0000000
JAX00123711   4 53.542073 1.799165 1.0000000
JAX00574407   5  6.213413 3.388862 0.1052020
UNCHS017906   6 37.001766 1.868162 1.0000000
JAX00233659   7 87.998157 1.870072 1.0000000
JAX00667121   8 24.443849 2.382541 0.7192282
UNC17203329   9 68.519175 1.323467 1.0000000
JAX00302150  10 74.547218 2.532706 0.6196652
UNC20281687  11 67.380801 1.859331 1.0000000
UNCHS034188  12 38.836978 1.870151 1.0000000
JAX00350973  13  5.743505 1.378528 1.0000000
JAX00380911  14 30.154517 2.381660 0.7192282
UNC25275535  15 11.968141 1.402063 1.0000000
UNC26790882  16 30.832641 2.019242 0.8169482
UNCHS045288  17 60.699043 2.034920 0.8169482
JAX00450853  18  2.913076 2.621475 0.6196652
UNCHS047190  19  8.712408 1.804318 1.0000000
XiB2          X 45.699951 1.870087 0.9986399

print("all peaks with a p-value less or equal to 0.05 (suggestive)")

[1] "all peaks with a p-value less or equal to 0.05 (suggestive)"

print(as.data.frame(summary(scanone.hk, perms=operm.hk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

[1] chr pos lod
<0 rows> (or 0-length row.names)

#print("method == ehk")

#scanone.ehk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.PBS" , model="binary", method="ehk")
#operm.ehk <- qtl::scanone(cross.probs, method = "ehk", pheno.col="ICI.vs.PBS", n.perm = 10, perm.Xsp = TRUE, model="binary", verbose=FALSE)
#plot(operm.ehk)
#print(summary(operm.ehk, alpha=c(0.01,  0.05, 0.1)))

#plot(scanone.ehk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.1, col = 'purple')

#print(as.data.frame(summary(scanone.ehk)))
#print(as.data.frame(summary(scanone.ehk, perms=operm.ehk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

Conditionaing on eoi vs. ici chr 3 peak (UNCHS008487) & chr 10 peak (UNC18240977)

Genome-wide scan

Xcovar <- get_x_covar(gm)
addcovar = model.matrix(~UNCHS008487+UNC18240977, data = covars)[,-1]

#K <- calc_kinship(pr.qc, type = "loco")
#heatmap(K[[1]])
#K.overall <- calc_kinship(pr.qc, type = "overall")
#heatmap(K.overall)
kinship <- calc_kinship(pr.qc)
heatmap(kinship)

#operm <- scan1perm(pr.qc, gm$covar$phenos, Xcovar=Xcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, addcovar = addcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, n_perm=2000)
operm <- scan1perm(pr.qc, gm$covar["ICI.vs.PBS"], model="binary", n_perm=10, perm_Xsp=TRUE, chr_lengths=chr_lengths(gm$gmap), addcovar = addcovar)

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))
names(summary_table) <- c("autosomes","X")
summary_table$significance.level <- rownames(summary_table)

rownames(summary_table) <- NULL

summary_table[c(3,1:2)] %>%
  kable(escape = F,align = c("ccc")) %>%
  kable_styling("striped", full_width = T) %>%
  column_spec(1, bold=TRUE)

significance.level	autosomes	X
0.01	3.836258	3.570782
0.05	3.769605	3.530141
0.1	3.686082	3.476994

The figures below show QTL maps for each phenotype

out <- scan1(pr.qc, gm$covar["ICI.vs.PBS"], Xcovar=Xcovar, model="binary", addcovar = addcovar)

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))

plot_lod<-function(out,map){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    ##legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- 14 # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    ##legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM] \n(using same scale as eoi  vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm, alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()
  }
}

plot_lod(out,gm$gmap)

LOD peaks

The table below shows QTL peaks associated with the phenotype. We use the 95% threshold from the permutations to find peaks.

Centimorgan (cM)

peaks <- find_peaks(out, gm$gmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)

if(nrow(peaks) >0){
peaks$marker <- find_marker(gm$gmap, chr=peaks$chr,pos=peaks$pos)
names(peaks)[2] <- c("phenotype")
peaks <- peaks[-1]

rownames(peaks) <- NULL
print(kable(peaks, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

#plot only peak chromosomes

plot_lod_chr<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    
    ymx <- 14
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]\n(using same scale as eoi vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

  }
}


for(i in unique(peaks$chr)){
#for (i in 1:nrow(peaks)){
  #plot_lod_chr(out,gm$gmap, peaks$chr[i])
  plot_lod_chr(out,gm$gmap, i)
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 3.76960547977009 [autosomes]/3.53014070295545 [x-chromosome]”

Megabase (MB)

print("peaks in MB positions")

[1] “peaks in MB positions”

peaks_mba <- find_peaks(out, gm$pmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)

if(nrow(peaks) >0){
peaks_mba$marker <- find_marker(gm$pmap, chr=peaks_mba$chr,pos=peaks_mba$pos)
names(peaks_mba)[2] <- c("phenotype")
peaks_mba <- peaks_mba[-1]

#peaks_mbl <- list()
##corresponding info in Mb
#for(i in 1:nrow(peaks)){
#  #lodindex <- peaks$lodindex[i]
#  phenotype <- peaks$phenotype[i]
#  chr <- as.character(peaks$chr[i])
#  lod <- peaks$lod[i]
#  mark <- peaks$marker[i]
#  pos <- mapdf[mapdf$marker==mark,]$pmapdf
#  ci_lo <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_lo[i] & mapdfnd$chr == peaks$chr[i])]
#  ci_hi <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_hi[i] & mapdfnd$chr == peaks$chr[i])]
#  peaks_mb=as.data.frame(cbind(phenotype, chr, pos, lod, ci_lo, ci_hi, mark))
#  names(peaks_mb)[7] <- c("marker")
#  peaks_mbl[[i]] <- peaks_mb
#}
#peaks_mba2 <- do.call(rbind, peaks_mbl)
#peaks_mba2 <- as.data.frame(peaks_mba)
#peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")] <- sapply(peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")], as.numeric)

rownames(peaks_mba) <- NULL
print(kable(peaks_mba, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

plot_lod_chr_mb<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    ymx <- 14
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]\n(using same scale as eoi vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')


  }
}

for(i in unique(peaks_mba$chr)){
#for (i in 1:nrow(peaks_mba)){
  #plot_lod_chr_mb(out,gm$pmap, peaks_mba$chr[i])
  plot_lod_chr_mb(out,gm$pmap,i)
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 3.76960547977009 [autosomes]/3.53014070295545 [x-chromosome]”

QTL effects

For each peak LOD location we give a list of gene

query_variants <- create_variant_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/cc_variants.sqlite")
query_genes <- create_gene_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/mouse_genes_mgi.sqlite")

if(nrow(peaks) >0){
for (i in 1:nrow(peaks)){
#for (i in 1:1){
  #Plot 1
  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], gm$covar[peaks$phenotype[i]], addcovar = addcovar)
  blup_sub <- scan1blup(pr_sub[,chr], gm$covar[peaks$phenotype[i]], addcovar = addcovar)

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.pbs_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_5.batches_mis_conditional_2-peaks-chr3-10.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM])")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i], "; pos: ", peaks$pos[i], "cM / ",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM])")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM])")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.pbs_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_5.batches_mis_conditional_2-peaks-chr3-10.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))

  #table
  

}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 3.76960547977009 [autosomes]/3.53014070295545 [x-chromosome]”

R/qtl

scanone

gm

Object of class cross2 (crosstype "bc")

Total individuals               138
No. genotyped individuals       138
No. phenotyped individuals      138
No. with both geno & pheno      138

No. phenotypes                    1
No. covariates                    7
No. phenotype covariates          0

No. chromosomes                  20
Total markers                131355

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
9956 9987 7848 7585 7609 7736 7399 6458 6713 6385 7143 6110 6082 5966 5346 5015 
  17   18   19    X 
5080 4605 3562 4770 

#detach("package:qtl2", unload=TRUE)
#library(qtl)

cross <- qtl::read.cross("csv", file = "data/ici.vs.pbs_gm_qtl_5.batches_mis_conditional_2-peaks-chr3-10.csv",alleles=c("A","B"))

 --Read the following data:
     138  individuals
     131355  markers
     5  phenotypes
 --Cross type: bc 

cross <- qtl::jittermap(cross)

summary(cross)

    Backcross

    No. individuals:    138 

    No. phenotypes:     5 
    Percent phenotyped: 100 100 100 99.3 98.6 

    No. chromosomes:    20 
        Autosomes:      1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 
        X chr:          X 

    Total markers:      131355 
    No. markers:        9956 9987 7848 7585 7609 7736 7399 6458 6713 6385 7143 
                        6110 6082 5966 5346 5015 5080 4605 3562 4770 
    Percent genotyped:  99.5 
    Genotypes (%):    
          Autosomes:    AA:88.1  AB:11.9 
       X chromosome:    AA:93.9  AB:6.1  

cross.probs <- qtl::calc.genoprob(cross)

print("method == hk")

[1] "method == hk"

add.covars = qtl::pull.pheno(cross.probs, c("UNCHS008487","UNC18240977"))

scanone.hk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.PBS" , model="binary", method="hk", addcovar = add.covars)
operm.hk <- qtl::scanone(cross.probs, method = "hk", pheno.col="ICI.vs.PBS", n.perm = 10, perm.Xsp = TRUE, model="binary", verbose=FALSE, addcovar = add.covars)
plot(operm.hk)

print(summary(operm.hk, alpha=c(0.01,  0.05, 0.1)))

Autosome LOD thresholds (10 permutations)
     lod
1%  3.87
5%  3.76
10% 3.62

X chromosome LOD thresholds (182 permutations)
     lod
1%  3.64
5%  3.56
10% 3.45

#plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- maxlod(out) # overall maximum LOD score
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]")) 
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- 14
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]\n(using same scale as ici vs. eoi for easier comparison)"))
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

print(as.data.frame(summary(scanone.hk, perms=operm.hk, pvalues=TRUE, format="allpeaks")))

            chr       pos      lod      pval
UNC1197721    1 47.673577 1.868502 1.0000000
UNCHS005266   2 40.908610 1.873368 1.0000000
UNC6045859    3 50.620447 1.870152 1.0000000
JAX00123711   4 53.542073 1.799165 1.0000000
JAX00574407   5  6.213413 3.388862 0.2097615
UNCHS017906   6 37.001766 1.868162 1.0000000
JAX00233659   7 87.998157 1.870072 1.0000000
JAX00667121   8 24.443849 2.382541 0.9118988
UNC17203329   9 68.519175 1.323467 1.0000000
JAX00302150  10 74.547218 2.532706 0.7192282
UNC20281687  11 67.380801 1.859331 1.0000000
UNCHS034188  12 38.836978 1.870151 1.0000000
JAX00350973  13  5.743505 1.378528 1.0000000
JAX00380911  14 30.154517 2.381660 0.9118988
UNC25275535  15 11.968141 1.402063 1.0000000
UNC26790882  16 30.832641 2.019242 1.0000000
UNCHS045288  17 60.699043 2.034920 1.0000000
JAX00450853  18  2.913076 2.621475 0.7192282
UNCHS047190  19  8.712408 1.804318 1.0000000
XiB2          X 45.699951 1.870087 0.9992566

print("all peaks with a p-value less or equal to 0.05 (suggestive)")

[1] "all peaks with a p-value less or equal to 0.05 (suggestive)"

print(as.data.frame(summary(scanone.hk, perms=operm.hk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

[1] chr pos lod
<0 rows> (or 0-length row.names)

#print("method == ehk")

#scanone.ehk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.PBS" , model="binary", method="ehk")
#operm.ehk <- qtl::scanone(cross.probs, method = "ehk", pheno.col="ICI.vs.PBS", n.perm = 10, perm.Xsp = TRUE, model="binary", verbose=FALSE)
#plot(operm.ehk)
#print(summary(operm.ehk, alpha=c(0.01,  0.05, 0.1)))

#plot(scanone.ehk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.1, col = 'purple')

#print(as.data.frame(summary(scanone.ehk)))
#print(as.data.frame(summary(scanone.ehk, perms=operm.ehk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

Conditionaing on eoi vs. ici chr 4 peak (UNCHS008487) & chr 10 peak (UNC18240977)

Genome-wide scan

Xcovar <- get_x_covar(gm)
addcovar = model.matrix(~UNC8250659+UNC18240977, data = covars)[,-1]

#K <- calc_kinship(pr.qc, type = "loco")
#heatmap(K[[1]])
#K.overall <- calc_kinship(pr.qc, type = "overall")
#heatmap(K.overall)
kinship <- calc_kinship(pr.qc)
heatmap(kinship)

#operm <- scan1perm(pr.qc, gm$covar$phenos, Xcovar=Xcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, addcovar = addcovar, n_perm=2000)
#operm <- scan1perm(pr.qc, gm$covar$phenos, n_perm=2000)
operm <- scan1perm(pr.qc, gm$covar["ICI.vs.PBS"], model="binary", n_perm=10, perm_Xsp=TRUE, chr_lengths=chr_lengths(gm$gmap), addcovar = addcovar)

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))
names(summary_table) <- c("autosomes","X")
summary_table$significance.level <- rownames(summary_table)

rownames(summary_table) <- NULL

summary_table[c(3,1:2)] %>%
  kable(escape = F,align = c("ccc")) %>%
  kable_styling("striped", full_width = T) %>%
  column_spec(1, bold=TRUE)

significance.level	autosomes	X
0.01	3.356177	4.091918
0.05	3.268316	3.753006
0.1	3.158217	3.309814

The figures below show QTL maps for each phenotype

out <- scan1(pr.qc, gm$covar["ICI.vs.PBS"], Xcovar=Xcovar, model="binary", addcovar = addcovar)

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))

plot_lod<-function(out,map){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    ##legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- 14 # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    ##legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " [positions in cM] \n(using same scale as eoi  vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm, alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()
  }
}

plot_lod(out,gm$gmap)

LOD peaks

The table below shows QTL peaks associated with the phenotype. We use the 95% threshold from the permutations to find peaks.

Centimorgan (cM)

peaks <- find_peaks(out, gm$gmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)

if(nrow(peaks) >0){
peaks$marker <- find_marker(gm$gmap, chr=peaks$chr,pos=peaks$pos)
names(peaks)[2] <- c("phenotype")
peaks <- peaks[-1]

rownames(peaks) <- NULL
print(kable(peaks, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

#plot only peak chromosomes

plot_lod_chr<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    
    ymx <- 14
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in cM]\n(using same scale as eoi vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

  }
}


for(i in unique(peaks$chr)){
#for (i in 1:nrow(peaks)){
  #plot_lod_chr(out,gm$gmap, peaks$chr[i])
  plot_lod_chr(out,gm$gmap, i)
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

phenotype	chr	pos	lod	ci_lo	ci_hi	marker
ICI.vs.PBS	5	6.205	3.306708	6.19	85.153	UNCJPD008862

Megabase (MB)

print("peaks in MB positions")

[1] “peaks in MB positions”

peaks_mba <- find_peaks(out, gm$pmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)

if(nrow(peaks) >0){
peaks_mba$marker <- find_marker(gm$pmap, chr=peaks_mba$chr,pos=peaks_mba$pos)
names(peaks_mba)[2] <- c("phenotype")
peaks_mba <- peaks_mba[-1]

#peaks_mbl <- list()
##corresponding info in Mb
#for(i in 1:nrow(peaks)){
#  #lodindex <- peaks$lodindex[i]
#  phenotype <- peaks$phenotype[i]
#  chr <- as.character(peaks$chr[i])
#  lod <- peaks$lod[i]
#  mark <- peaks$marker[i]
#  pos <- mapdf[mapdf$marker==mark,]$pmapdf
#  ci_lo <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_lo[i] & mapdfnd$chr == peaks$chr[i])]
#  ci_hi <- mapdfnd$pmapdf[which(mapdfnd$gmapdf == peaks$ci_hi[i] & mapdfnd$chr == peaks$chr[i])]
#  peaks_mb=as.data.frame(cbind(phenotype, chr, pos, lod, ci_lo, ci_hi, mark))
#  names(peaks_mb)[7] <- c("marker")
#  peaks_mbl[[i]] <- peaks_mb
#}
#peaks_mba2 <- do.call(rbind, peaks_mbl)
#peaks_mba2 <- as.data.frame(peaks_mba)
#peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")] <- sapply(peaks_mba[,c("chr", "pos", "lod", "ci_lo", "ci_hi")], as.numeric)

rownames(peaks_mba) <- NULL
print(kable(peaks_mba, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

plot_lod_chr_mb<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

    ymx <- 14
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " [positions in MB]\n(using same scale as eoi vs. ici for easier comparison)"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')


  }
}

for(i in unique(peaks_mba$chr)){
#for (i in 1:nrow(peaks_mba)){
  #plot_lod_chr_mb(out,gm$pmap, peaks_mba$chr[i])
  plot_lod_chr_mb(out,gm$pmap,i)
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

phenotype	chr	pos	lod	ci_lo	ci_hi	marker
ICI.vs.PBS	5	14.40964	3.306708	14.38688	145.608	UNCJPD008862

QTL effects

For each peak LOD location we give a list of gene

query_variants <- create_variant_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/cc_variants.sqlite")
query_genes <- create_gene_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/mouse_genes_mgi.sqlite")

if(nrow(peaks) >0){
for (i in 1:nrow(peaks)){
#for (i in 1:1){
  #Plot 1
  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, gm$covar[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], gm$covar[peaks$phenotype[i]], addcovar = addcovar)
  blup_sub <- scan1blup(pr_sub[,chr], gm$covar[peaks$phenotype[i]], addcovar = addcovar)

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.pbs_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_5.batches_mis_conditional_2-peaks-chr4-10.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM])")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i], "; pos: ", peaks$pos[i], "cM / ",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM])")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM])")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.pbs_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_5.batches_mis_conditional_2-peaks-chr4-10.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))

  #table
  

}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

chr	type	start	stop	strand	ID	Name	Dbxref	gene_id	mgi_type	description
5	gene	14.51492	14.86346	positive	MGI_C57BL6J_1349390	Pclo	NCBI_Gene:26875,ENSEMBL:ENSMUSG00000061601	MGI:1349390	protein coding gene	piccolo (presynaptic cytomatrix protein)
5	gene	14.52067	14.53985	negative	MGI_C57BL6J_5504033	Gm26918	ENSEMBL:ENSMUSG00000097976	MGI:5504033	lncRNA gene	predicted gene, 26918
5	gene	14.56334	14.56662	positive	MGI_C57BL6J_5662583	Gm42446	ENSEMBL:ENSMUSG00000106491	MGI:5662583	unclassified gene	predicted gene 42446
5	gene	14.59686	14.59977	positive	MGI_C57BL6J_5662584	Gm42447	ENSEMBL:ENSMUSG00000105485	MGI:5662584	unclassified gene	predicted gene 42447
5	gene	14.59992	14.60256	positive	MGI_C57BL6J_5662585	Gm42448	ENSEMBL:ENSMUSG00000104625	MGI:5662585	unclassified gene	predicted gene 42448
5	gene	14.60405	14.60861	positive	MGI_C57BL6J_5662581	Gm42444	ENSEMBL:ENSMUSG00000106048	MGI:5662581	unclassified gene	predicted gene 42444
5	gene	14.61165	14.61454	positive	MGI_C57BL6J_5662582	Gm42445	ENSEMBL:ENSMUSG00000106411	MGI:5662582	unclassified gene	predicted gene 42445
5	gene	14.66565	14.66715	positive	MGI_C57BL6J_5663800	Gm43663	ENSEMBL:ENSMUSG00000105578	MGI:5663800	unclassified gene	predicted gene 43663
5	gene	14.69698	14.72366	negative	MGI_C57BL6J_5504069	Gm26954	ENSEMBL:ENSMUSG00000098233	MGI:5504069	lncRNA gene	predicted gene, 26954
5	gene	14.77893	14.78120	positive	MGI_C57BL6J_5663799	Gm43662	ENSEMBL:ENSMUSG00000105571	MGI:5663799	unclassified gene	predicted gene 43662
5	pseudogene	14.78323	14.78438	positive	MGI_C57BL6J_5010853	Gm18668	NCBI_Gene:100417529	MGI:5010853	pseudogene	predicted gene, 18668
5	gene	14.80490	14.80656	positive	MGI_C57BL6J_5663802	Gm43665	ENSEMBL:ENSMUSG00000104672	MGI:5663802	unclassified gene	predicted gene 43665
5	gene	14.91012	14.91515	negative	MGI_C57BL6J_3704245	Gm9758	NCBI_Gene:381714,ENSEMBL:ENSMUSG00000033219	MGI:3704245	protein coding gene	predicted gene 9758
5	gene	14.93322	14.93848	negative	MGI_C57BL6J_2668871	Speer4e	NCBI_Gene:624245,ENSEMBL:ENSMUSG00000091255	MGI:2668871	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4e
5	pseudogene	14.94529	14.97854	positive	MGI_C57BL6J_1921312	Speer8-ps1	NCBI_Gene:74062	MGI:1921312	pseudogene	spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1
5	gene	14.97411	14.97948	negative	MGI_C57BL6J_3809109	Gm10354	NCBI_Gene:100503549,ENSEMBL:ENSMUSG00000072188	MGI:3809109	protein coding gene	predicted gene 10354
5	gene	15.02895	15.03353	negative	MGI_C57BL6J_4868370	Gm17019	NCBI_Gene:66773,ENSEMBL:ENSMUSG00000091897	MGI:4868370	protein coding gene	predicted gene 17019
5	gene	15.46417	15.47888	positive	MGI_C57BL6J_5663528	Gm43391	ENSEMBL:ENSMUSG00000106004	MGI:5663528	lncRNA gene	predicted gene 43391
5	gene	15.47170	15.47703	negative	MGI_C57BL6J_5434504	Gm21149	NCBI_Gene:100861702,ENSEMBL:ENSMUSG00000099762	MGI:5434504	protein coding gene	predicted gene, 21149
5	gene	15.51156	15.65668	positive	MGI_C57BL6J_5434011	Gm21847	NCBI_Gene:105242428,ENSEMBL:ENSMUSG00000094230	MGI:5434011	lncRNA gene	predicted gene, 21847
5	gene	15.52446	15.52922	negative	MGI_C57BL6J_5434545	Gm21190	NCBI_Gene:100861755,ENSEMBL:ENSMUSG00000106445	MGI:5434545	protein coding gene	predicted gene, 21190
5	gene	15.53800	15.60512	negative	MGI_C57BL6J_5589772	Gm30613	NCBI_Gene:108168719,ENSEMBL:ENSMUSG00000105300	MGI:5589772	lncRNA gene	predicted gene, 30613
5	gene	15.57695	15.58210	positive	MGI_C57BL6J_5434438	Gm21083	NCBI_Gene:105242399,ENSEMBL:ENSMUSG00000096878	MGI:5434438	protein coding gene	predicted gene, 21083
5	gene	15.60997	15.63411	negative	MGI_C57BL6J_5589576	Gm30417	NCBI_Gene:102632308	MGI:5589576	lncRNA gene	predicted gene, 30417
5	gene	15.61906	15.62386	positive	MGI_C57BL6J_2668869	Speer4d	NCBI_Gene:360220,ENSEMBL:ENSMUSG00000070933	MGI:2668869	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4D
5	gene	15.65229	15.65706	negative	MGI_C57BL6J_2441686	4930572O03Rik	NCBI_Gene:381715,ENSEMBL:ENSMUSG00000069720	MGI:2441686	protein coding gene	RIKEN cDNA 4930572O03 gene
5	gene	15.68071	15.71460	positive	MGI_C57BL6J_1923108	Speer4cos	NCBI_Gene:75858,ENSEMBL:ENSMUSG00000089871	MGI:1923108	antisense lncRNA gene	spermatogenesis associated glutamate (E)-rich protein 4C, opposite strand transcript
5	gene	15.70950	15.71467	negative	MGI_C57BL6J_1914023	Speer4c	NCBI_Gene:100502967,ENSEMBL:ENSMUSG00000073208	MGI:1914023	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4C
5	pseudogene	15.79800	15.79903	positive	MGI_C57BL6J_5662589	Gm42452	ENSEMBL:ENSMUSG00000106083	MGI:5662589	pseudogene	predicted gene 42452
5	gene	15.80556	15.80674	positive	MGI_C57BL6J_5662591	Gm42454	ENSEMBL:ENSMUSG00000105515	MGI:5662591	unclassified gene	predicted gene 42454
5	gene	15.86393	15.88383	negative	MGI_C57BL6J_1922308	4930519H02Rik	NCBI_Gene:75058,ENSEMBL:ENSMUSG00000105185	MGI:1922308	lncRNA gene	RIKEN cDNA 4930519H02 gene
5	pseudogene	15.87025	15.87065	positive	MGI_C57BL6J_5662590	Gm42453	ENSEMBL:ENSMUSG00000105916	MGI:5662590	pseudogene	predicted gene 42453
5	pseudogene	15.90024	15.90049	negative	MGI_C57BL6J_5662588	Gm42451	ENSEMBL:ENSMUSG00000105310	MGI:5662588	pseudogene	predicted gene 42451
5	gene	15.92375	15.93407	negative	MGI_C57BL6J_3781687	Gm3510	NCBI_Gene:100041781,ENSEMBL:ENSMUSG00000096936	MGI:3781687	lncRNA gene	predicted gene 3510
5	gene	15.93469	16.37451	positive	MGI_C57BL6J_88295	Cacna2d1	NCBI_Gene:12293,ENSEMBL:ENSMUSG00000040118	MGI:88295	protein coding gene	calcium channel, voltage-dependent, alpha2/delta subunit 1
5	gene	15.96994	15.97105	positive	MGI_C57BL6J_1924322	6720420G18Rik	NA	NA	unclassified gene	RIKEN cDNA 6720420G18 gene
5	gene	15.99396	15.99784	negative	MGI_C57BL6J_5663137	Gm43000	ENSEMBL:ENSMUSG00000104886	MGI:5663137	lncRNA gene	predicted gene 43000
5	gene	15.99541	15.99906	positive	MGI_C57BL6J_2442323	9630055L06Rik	NA	NA	lncRNA gene	RIKEN cDNA 9630055L06 gene
5	gene	16.10713	16.10978	positive	MGI_C57BL6J_5663627	Gm43490	ENSEMBL:ENSMUSG00000105526	MGI:5663627	unclassified gene	predicted gene 43490
5	pseudogene	16.34340	16.34418	negative	MGI_C57BL6J_5663628	Gm43491	ENSEMBL:ENSMUSG00000106177	MGI:5663628	pseudogene	predicted gene 43491
5	pseudogene	16.50800	16.50920	negative	MGI_C57BL6J_3647416	Gm8984	NCBI_Gene:668121,ENSEMBL:ENSMUSG00000097941	MGI:3647416	pseudogene	predicted gene 8984
5	gene	16.55350	16.62015	positive	MGI_C57BL6J_96079	Hgf	NCBI_Gene:15234,ENSEMBL:ENSMUSG00000028864	MGI:96079	protein coding gene	hepatocyte growth factor
5	gene	16.55403	16.56948	negative	MGI_C57BL6J_5590272	Gm31113	NCBI_Gene:102633235	MGI:5590272	lncRNA gene	predicted gene, 31113
5	gene	16.57295	16.57394	positive	MGI_C57BL6J_5663626	Gm43489	ENSEMBL:ENSMUSG00000106339	MGI:5663626	unclassified gene	predicted gene 43489
5	gene	16.60572	16.60721	positive	MGI_C57BL6J_5663112	Gm42975	ENSEMBL:ENSMUSG00000105660	MGI:5663112	unclassified gene	predicted gene 42975
5	pseudogene	16.72961	16.73111	negative	MGI_C57BL6J_3644227	Gm8991	NCBI_Gene:108169028,ENSEMBL:ENSMUSG00000059179	MGI:3644227	pseudogene	predicted pseudogene 8991
5	gene	16.79181	16.88205	positive	MGI_C57BL6J_5579416	Gm28710	NCBI_Gene:102640594,ENSEMBL:ENSMUSG00000099854,ENSEMBL:ENSMUSG00000109903	MGI:5579416	lncRNA gene	predicted gene 28710
5	pseudogene	16.98104	16.98129	positive	MGI_C57BL6J_5662992	Gm42855	ENSEMBL:ENSMUSG00000105706	MGI:5662992	pseudogene	predicted gene 42855
5	pseudogene	17.22338	17.22793	negative	MGI_C57BL6J_3645556	Gm6673	NCBI_Gene:626390,ENSEMBL:ENSMUSG00000091273	MGI:3645556	pseudogene	predicted gene 6673
5	gene	17.37317	17.37803	positive	MGI_C57BL6J_3781672	Speer4f2	NCBI_Gene:100041749,ENSEMBL:ENSMUSG00000091827	MGI:3781672	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4f2
5	pseudogene	17.38057	17.38170	positive	MGI_C57BL6J_5440234	Gm21999	ENSEMBL:ENSMUSG00000090750	MGI:5440234	pseudogene	predicted gene 21999
5	gene	17.47610	17.48094	positive	MGI_C57BL6J_1918185	Speer4f1	NCBI_Gene:70935,ENSEMBL:ENSMUSG00000058643	MGI:1918185	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4F1
5	pseudogene	17.49322	17.49429	positive	MGI_C57BL6J_3643011	Gm7047	NCBI_Gene:630927,ENSEMBL:ENSMUSG00000106358	MGI:3643011	pseudogene	predicted gene 7047
5	gene	17.57079	17.57168	negative	MGI_C57BL6J_5590714	Gm31555	NCBI_Gene:102633823	MGI:5590714	lncRNA gene	predicted gene, 31555
5	gene	17.57428	17.73027	positive	MGI_C57BL6J_107557	Sema3c	NCBI_Gene:20348,ENSEMBL:ENSMUSG00000028780	MGI:107557	protein coding gene	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
5	gene	17.78169	17.88896	negative	MGI_C57BL6J_107899	Cd36	NCBI_Gene:12491,ENSEMBL:ENSMUSG00000002944	MGI:107899	protein coding gene	CD36 molecule
5	gene	17.93219	17.95490	positive	MGI_C57BL6J_5590771	Gm31612	NCBI_Gene:102633896	MGI:5590771	lncRNA gene	predicted gene, 31612
5	gene	17.96255	18.01983	positive	MGI_C57BL6J_3588268	Gnat3	NCBI_Gene:242851,ENSEMBL:ENSMUSG00000028777	MGI:3588268	protein coding gene	guanine nucleotide binding protein, alpha transducing 3
5	gene	18.26514	18.36041	negative	MGI_C57BL6J_95771	Gnai1	NCBI_Gene:14677,ENSEMBL:ENSMUSG00000057614	MGI:95771	protein coding gene	guanine nucleotide binding protein (G protein), alpha inhibiting 1
5	pseudogene	18.35012	18.35345	positive	MGI_C57BL6J_3781704	Gm3527	NCBI_Gene:100041818,ENSEMBL:ENSMUSG00000104540	MGI:3781704	pseudogene	predicted gene 3527
5	gene	18.48169	18.49526	negative	MGI_C57BL6J_5590911	Gm31752	NCBI_Gene:102634084,ENSEMBL:ENSMUSG00000104718	MGI:5590911	lncRNA gene	predicted gene, 31752
5	pseudogene	18.81420	18.81480	positive	MGI_C57BL6J_5010074	Gm17889	NCBI_Gene:100416044,ENSEMBL:ENSMUSG00000105930	MGI:5010074	pseudogene	predicted gene, 17889
5	gene	18.86458	18.86470	positive	MGI_C57BL6J_5453599	Gm23822	ENSEMBL:ENSMUSG00000089364	MGI:5453599	snoRNA gene	predicted gene, 23822
5	gene	19.19848	19.20161	negative	MGI_C57BL6J_5663169	Gm43032	ENSEMBL:ENSMUSG00000106498	MGI:5663169	unclassified gene	predicted gene 43032
5	gene	19.20237	19.22656	negative	MGI_C57BL6J_1918082	4921504A21Rik	NCBI_Gene:70832,ENSEMBL:ENSMUSG00000097626	MGI:1918082	lncRNA gene	RIKEN cDNA 4921504A21 gene
5	pseudogene	19.20367	19.20393	positive	MGI_C57BL6J_5591261	Gm32102	NCBI_Gene:102634548,ENSEMBL:ENSMUSG00000106433	MGI:5591261	pseudogene	predicted gene, 32102
5	gene	19.22661	20.70479	positive	MGI_C57BL6J_1354953	Magi2	NCBI_Gene:50791,ENSEMBL:ENSMUSG00000040003	MGI:1354953	protein coding gene	membrane associated guanylate kinase, WW and PDZ domain containing 2
5	pseudogene	19.50445	19.50621	negative	MGI_C57BL6J_5434364	Gm21009	NCBI_Gene:100534271,ENSEMBL:ENSMUSG00000106204	MGI:5434364	pseudogene	predicted gene, 21009
5	gene	19.51541	19.51551	negative	MGI_C57BL6J_5455112	Gm25335	ENSEMBL:ENSMUSG00000088668	MGI:5455112	snRNA gene	predicted gene, 25335
5	gene	20.09261	20.09272	positive	MGI_C57BL6J_5453347	Gm23570	ENSEMBL:ENSMUSG00000096882	MGI:5453347	snRNA gene	predicted gene, 23570
5	gene	20.11432	20.11445	negative	MGI_C57BL6J_5455538	Gm25761	ENSEMBL:ENSMUSG00000077171	MGI:5455538	snoRNA gene	predicted gene, 25761
5	pseudogene	20.26062	20.26096	negative	MGI_C57BL6J_5663817	Gm43680	ENSEMBL:ENSMUSG00000106559	MGI:5663817	pseudogene	predicted gene 43680
5	gene	20.26434	20.26444	positive	MGI_C57BL6J_5452532	Gm22755	ENSEMBL:ENSMUSG00000087768	MGI:5452532	snRNA gene	predicted gene, 22755
5	pseudogene	20.58859	20.58922	positive	MGI_C57BL6J_3781721	Gm3544	NCBI_Gene:100041850,ENSEMBL:ENSMUSG00000106240	MGI:3781721	pseudogene	predicted gene 3544
5	gene	20.70228	20.70605	positive	MGI_C57BL6J_5579960	Gm29254	ENSEMBL:ENSMUSG00000073174	MGI:5579960	lncRNA gene	predicted gene 29254
5	gene	20.72839	20.72889	positive	MGI_C57BL6J_1916064	1110060G06Rik	ENSEMBL:ENSMUSG00000105036	MGI:1916064	unclassified gene	RIKEN cDNA 1110060G06 gene
5	gene	20.75866	20.88212	negative	MGI_C57BL6J_1916020	Phtf2	NCBI_Gene:68770,ENSEMBL:ENSMUSG00000039987	MGI:1916020	protein coding gene	putative homeodomain transcription factor 2
5	pseudogene	20.80607	20.80650	positive	MGI_C57BL6J_3648926	Rpl31-ps5	NCBI_Gene:622367,ENSEMBL:ENSMUSG00000082716	MGI:3648926	pseudogene	ribosomal protein L31, pseudogene 5
5	gene	20.80748	20.81293	positive	MGI_C57BL6J_5625104	Gm42219	NCBI_Gene:105247041	MGI:5625104	lncRNA gene	predicted gene, 42219
5	gene	20.88219	20.88687	positive	MGI_C57BL6J_2673965	Tmem60	NCBI_Gene:212090,ENSEMBL:ENSMUSG00000045435	MGI:2673965	protein coding gene	transmembrane protein 60
5	gene	20.89229	20.95640	negative	MGI_C57BL6J_3036237	Rsbn1l	NCBI_Gene:242860,ENSEMBL:ENSMUSG00000039968	MGI:3036237	protein coding gene	round spermatid basic protein 1-like
5	gene	20.95099	20.95640	positive	MGI_C57BL6J_2444702	A630072M18Rik	NCBI_Gene:320770,ENSEMBL:ENSMUSG00000101013	MGI:2444702	lncRNA gene	RIKEN cDNA A630072M18 gene
5	gene	20.98664	21.05599	negative	MGI_C57BL6J_104673	Ptpn12	NCBI_Gene:19248,ENSEMBL:ENSMUSG00000028771	MGI:104673	protein coding gene	protein tyrosine phosphatase, non-receptor type 12
5	gene	21.03175	21.03308	positive	MGI_C57BL6J_5663353	Gm43216	ENSEMBL:ENSMUSG00000106158	MGI:5663353	unclassified gene	predicted gene 43216
5	gene	21.05599	21.09645	positive	MGI_C57BL6J_5625106	Gm42221	NCBI_Gene:105247043	MGI:5625106	lncRNA gene	predicted gene, 42221
5	gene	21.11708	21.11720	negative	MGI_C57BL6J_5452267	Gm22490	ENSEMBL:ENSMUSG00000087813	MGI:5452267	snoRNA gene	predicted gene, 22490
5	pseudogene	21.11912	21.11952	negative	MGI_C57BL6J_3644652	Rpl31-ps21	NCBI_Gene:626903,ENSEMBL:ENSMUSG00000096269	MGI:3644652	pseudogene	ribosomal protein L31, pseudogene 21
5	pseudogene	21.12400	21.12541	positive	MGI_C57BL6J_5011015	Gm18830	NCBI_Gene:100417793,ENSEMBL:ENSMUSG00000106116	MGI:5011015	pseudogene	predicted gene, 18830
5	gene	21.13108	21.13202	positive	MGI_C57BL6J_5662797	Gm42660	ENSEMBL:ENSMUSG00000106104	MGI:5662797	unclassified gene	predicted gene 42660
5	gene	21.13810	21.14496	positive	MGI_C57BL6J_5625107	Gm42222	NCBI_Gene:105247044	MGI:5625107	lncRNA gene	predicted gene, 42222
5	gene	21.17628	21.31513	positive	MGI_C57BL6J_2442259	Gsap	NCBI_Gene:212167,ENSEMBL:ENSMUSG00000039934	MGI:2442259	protein coding gene	gamma-secretase activating protein
5	pseudogene	21.21401	21.21426	positive	MGI_C57BL6J_5663352	Gm43215	ENSEMBL:ENSMUSG00000104920	MGI:5663352	pseudogene	predicted gene 43215
5	pseudogene	21.27927	21.27962	negative	MGI_C57BL6J_5663351	Gm43214	ENSEMBL:ENSMUSG00000105275	MGI:5663351	pseudogene	predicted gene 43214
5	gene	21.29184	21.42468	negative	MGI_C57BL6J_1922422	Ccdc146	NCBI_Gene:75172,ENSEMBL:ENSMUSG00000064280	MGI:1922422	protein coding gene	coiled-coil domain containing 146
5	gene	21.37264	21.37839	positive	MGI_C57BL6J_103266	Fgl2	NCBI_Gene:14190,ENSEMBL:ENSMUSG00000039899	MGI:103266	protein coding gene	fibrinogen-like protein 2
5	gene	21.42486	21.48827	positive	MGI_C57BL6J_2140983	Fam185a	NCBI_Gene:330050,ENSEMBL:ENSMUSG00000047221	MGI:2140983	protein coding gene	family with sequence similarity 185, member A
5	gene	21.48385	21.64570	negative	MGI_C57BL6J_2443416	Fbxl13	NCBI_Gene:320118,ENSEMBL:ENSMUSG00000048520	MGI:2443416	protein coding gene	F-box and leucine-rich repeat protein 13
5	gene	21.54353	21.57591	positive	MGI_C57BL6J_1921761	Lrrc17	NCBI_Gene:74511,ENSEMBL:ENSMUSG00000039883	MGI:1921761	protein coding gene	leucine rich repeat containing 17
5	pseudogene	21.59874	21.59956	positive	MGI_C57BL6J_3644322	Gm6543	NCBI_Gene:625004,ENSEMBL:ENSMUSG00000106135	MGI:3644322	pseudogene	predicted gene 6543
5	pseudogene	21.61397	21.61454	negative	MGI_C57BL6J_3779802	Gm8539	NCBI_Gene:105247045,ENSEMBL:ENSMUSG00000106294	MGI:3779802	pseudogene	predicted gene 8539
5	gene	21.64581	21.66269	positive	MGI_C57BL6J_1914461	Armc10	NCBI_Gene:67211,ENSEMBL:ENSMUSG00000038525	MGI:1914461	protein coding gene	armadillo repeat containing 10
5	gene	21.66290	21.70215	negative	MGI_C57BL6J_2140885	Napepld	NCBI_Gene:242864,ENSEMBL:ENSMUSG00000044968	MGI:2140885	protein coding gene	N-acyl phosphatidylethanolamine phospholipase D
5	pseudogene	21.68954	21.69017	positive	MGI_C57BL6J_3783161	Gm15719	NCBI_Gene:100417713,ENSEMBL:ENSMUSG00000081242	MGI:3783161	pseudogene	predicted gene 15719
5	gene	21.69628	21.69759	negative	MGI_C57BL6J_1925807	9530071P10Rik	NA	NA	unclassified gene	RIKEN cDNA 9530071P10 gene
5	gene	21.73714	21.75715	positive	MGI_C57BL6J_1920328	Pmpcb	NCBI_Gene:73078,ENSEMBL:ENSMUSG00000029017	MGI:1920328	protein coding gene	peptidase (mitochondrial processing) beta
5	pseudogene	21.74713	21.74874	negative	MGI_C57BL6J_3783157	Gm15715	NCBI_Gene:102634879,ENSEMBL:ENSMUSG00000083006	MGI:3783157	pseudogene	predicted gene 15715
5	gene	21.75727	21.78525	negative	MGI_C57BL6J_99470	Dnajc2	NCBI_Gene:22791,ENSEMBL:ENSMUSG00000029014	MGI:99470	protein coding gene	DnaJ heat shock protein family (Hsp40) member C2
5	gene	21.78528	21.80379	positive	MGI_C57BL6J_109555	Psmc2	NCBI_Gene:19181,ENSEMBL:ENSMUSG00000028932	MGI:109555	protein coding gene	proteasome (prosome, macropain) 26S subunit, ATPase 2
5	gene	21.80900	21.86560	negative	MGI_C57BL6J_1933154	Slc26a5	NCBI_Gene:80979,ENSEMBL:ENSMUSG00000029015	MGI:1933154	protein coding gene	solute carrier family 26, member 5
5	gene	21.88445	22.34471	negative	MGI_C57BL6J_103022	Reln	NCBI_Gene:19699,ENSEMBL:ENSMUSG00000042453	MGI:103022	protein coding gene	reelin
5	pseudogene	21.88949	21.89019	positive	MGI_C57BL6J_3801919	Gm16111	NCBI_Gene:100416321,ENSEMBL:ENSMUSG00000090008	MGI:3801919	pseudogene	predicted gene 16111
5	gene	21.91093	21.95401	positive	MGI_C57BL6J_3642283	Gm10475	ENSEMBL:ENSMUSG00000073152	MGI:3642283	lncRNA gene	predicted gene 10475
5	pseudogene	21.95105	21.95312	negative	MGI_C57BL6J_1270127	Dnaja1-ps	NCBI_Gene:111256,ENSEMBL:ENSMUSG00000090197	MGI:1270127	pseudogene	DnaJ heat shock protein family (Hsp40) member A1, pseudogene
5	gene	21.95609	21.95799	negative	MGI_C57BL6J_5011851	Gm19666	ENSEMBL:ENSMUSG00000105766	MGI:5011851	unclassified non-coding RNA gene	predicted gene, 19666
5	pseudogene	22.28121	22.28158	negative	MGI_C57BL6J_3801918	Gm16113	ENSEMBL:ENSMUSG00000089910	MGI:3801918	pseudogene	predicted gene 16113
5	pseudogene	22.29279	22.29317	positive	MGI_C57BL6J_3801973	Gm16112	ENSEMBL:ENSMUSG00000089793	MGI:3801973	pseudogene	predicted gene 16112
5	gene	22.33444	22.33612	positive	MGI_C57BL6J_3801975	Gm16110	ENSEMBL:ENSMUSG00000090226	MGI:3801975	lncRNA gene	predicted gene 16110
5	gene	22.35731	22.37853	positive	MGI_C57BL6J_5625108	Gm42223	NCBI_Gene:105247046	MGI:5625108	lncRNA gene	predicted gene, 42223
5	gene	22.35916	22.35928	negative	MGI_C57BL6J_5455236	Gm25459	ENSEMBL:ENSMUSG00000088578	MGI:5455236	snoRNA gene	predicted gene, 25459
5	gene	22.40089	22.40472	negative	MGI_C57BL6J_5663794	Gm43657	ENSEMBL:ENSMUSG00000105106	MGI:5663794	lncRNA gene	predicted gene 43657
5	gene	22.43033	22.43044	negative	MGI_C57BL6J_4422035	n-R5s170	ENSEMBL:ENSMUSG00000065660	MGI:4422035	rRNA gene	nuclear encoded rRNA 5S 170
5	pseudogene	22.47277	22.47299	negative	MGI_C57BL6J_5663247	Gm43110	ENSEMBL:ENSMUSG00000105081	MGI:5663247	pseudogene	predicted gene 43110
5	gene	22.48648	22.55043	negative	MGI_C57BL6J_1347044	Orc5	NCBI_Gene:26429,ENSEMBL:ENSMUSG00000029012	MGI:1347044	protein coding gene	origin recognition complex, subunit 5
5	pseudogene	22.52822	22.52924	negative	MGI_C57BL6J_3705475	Gm15421	NCBI_Gene:100042049,ENSEMBL:ENSMUSG00000084235	MGI:3705475	pseudogene	predicted gene 15421
5	gene	22.53474	22.53484	negative	MGI_C57BL6J_5452664	Gm22887	ENSEMBL:ENSMUSG00000096346	MGI:5452664	snRNA gene	predicted gene, 22887
5	gene	22.55041	22.80785	positive	MGI_C57BL6J_2444595	6030443J06Rik	NCBI_Gene:320719,ENSEMBL:ENSMUSG00000097207	MGI:2444595	lncRNA gene	RIKEN cDNA 6030443J06 gene
5	gene	22.56141	22.59004	negative	MGI_C57BL6J_5625110	Gm42225	NCBI_Gene:105247049	MGI:5625110	lncRNA gene	predicted gene, 42225
5	pseudogene	22.56347	22.56446	positive	MGI_C57BL6J_3643991	Gm9057	NCBI_Gene:105247048,ENSEMBL:ENSMUSG00000105156	MGI:3643991	pseudogene	predicted gene 9057
5	pseudogene	22.61259	22.61325	negative	MGI_C57BL6J_3704246	Rpl17-ps5	NCBI_Gene:100042067,ENSEMBL:ENSMUSG00000081855	MGI:3704246	pseudogene	ribosomal protein L17, pseudogene 5
5	gene	22.64512	22.64518	negative	MGI_C57BL6J_5454289	Gm24512	ENSEMBL:ENSMUSG00000092704	MGI:5454289	snRNA gene	predicted gene, 24512
5	pseudogene	22.69356	22.69475	negative	MGI_C57BL6J_3779932	Gm9523	NCBI_Gene:671222,ENSEMBL:ENSMUSG00000106181	MGI:3779932	pseudogene	predicted gene 9523
5	pseudogene	22.72285	22.72396	negative	MGI_C57BL6J_5591870	Gm32711	NCBI_Gene:102635348	MGI:5591870	pseudogene	predicted gene, 32711
5	pseudogene	22.72408	22.72626	negative	MGI_C57BL6J_3646204	Gm6560	NCBI_Gene:625174,ENSEMBL:ENSMUSG00000104913	MGI:3646204	pseudogene	predicted gene 6560
5	gene	22.73891	22.74691	negative	MGI_C57BL6J_3612704	A930003O13Rik	NCBI_Gene:330052,ENSEMBL:ENSMUSG00000105076	MGI:3612704	lncRNA gene	RIKEN cDNA A930003O13 gene
5	gene	22.73902	22.73911	positive	MGI_C57BL6J_5690755	Gm44363	ENSEMBL:ENSMUSG00000105029	MGI:5690755	miRNA gene	predicted gene, 44363
5	gene	22.74602	23.27560	positive	MGI_C57BL6J_1925076	Lhfpl3	NCBI_Gene:269629,ENSEMBL:ENSMUSG00000106379	MGI:1925076	protein coding gene	lipoma HMGIC fusion partner-like 3
5	gene	22.77563	22.77870	positive	MGI_C57BL6J_5434010	Gm21846	ENSEMBL:ENSMUSG00000094832	MGI:5434010	lincRNA gene	predicted gene, 21846
5	gene	22.78134	22.78225	positive	MGI_C57BL6J_1925222	A930037G07Rik	NA	NA	unclassified gene	RIKEN cDNA A930037G07 gene
5	gene	22.86381	22.86855	negative	MGI_C57BL6J_5663306	Gm43169	ENSEMBL:ENSMUSG00000105543	MGI:5663306	unclassified gene	predicted gene 43169
5	pseudogene	22.93132	22.93208	negative	MGI_C57BL6J_3647928	Gm6564	NCBI_Gene:625219,ENSEMBL:ENSMUSG00000060879	MGI:3647928	pseudogene	predicted pseudogene 6564
5	gene	23.05250	23.05813	positive	MGI_C57BL6J_3779411	Gm11159	NA	NA	unclassified gene	predicted gene 11159
5	pseudogene	23.14340	23.14593	positive	MGI_C57BL6J_3781844	Gm3668	NCBI_Gene:102635161	MGI:3781844	pseudogene	predicted gene 3668
5	gene	23.20092	23.22380	negative	MGI_C57BL6J_5663085	Gm42948	ENSEMBL:ENSMUSG00000104866	MGI:5663085	lncRNA gene	predicted gene 42948
5	gene	23.27987	23.27991	negative	MGI_C57BL6J_5531404	Gm28022	ENSEMBL:ENSMUSG00000098903	MGI:5531404	miRNA gene	predicted gene, 28022
5	gene	23.33037	23.34727	negative	MGI_C57BL6J_5663088	Gm42951	ENSEMBL:ENSMUSG00000105254	MGI:5663088	lncRNA gene	predicted gene 42951
5	gene	23.33064	23.33965	positive	MGI_C57BL6J_4937068	Gm17434	NCBI_Gene:102635566	MGI:4937068	protein coding gene	predicted gene, 17434
5	gene	23.35265	23.43427	negative	MGI_C57BL6J_1923227	5031425E22Rik	NCBI_Gene:102635844,ENSEMBL:ENSMUSG00000073147	MGI:1923227	lncRNA gene	RIKEN cDNA 5031425E22 gene
5	pseudogene	23.37650	23.37662	positive	MGI_C57BL6J_5663859	Gm43722	ENSEMBL:ENSMUSG00000105091	MGI:5663859	pseudogene	predicted gene 43722
5	gene	23.38711	23.38860	positive	MGI_C57BL6J_1923106	4930580E04Rik	ENSEMBL:ENSMUSG00000106269	MGI:1923106	lncRNA gene	RIKEN cDNA 4930580E04 gene
5	pseudogene	23.38762	23.38824	negative	MGI_C57BL6J_5663195	Gm43058	ENSEMBL:ENSMUSG00000104765	MGI:5663195	pseudogene	predicted gene 43058
5	gene	23.39610	23.39688	positive	MGI_C57BL6J_5662646	Gm42509	ENSEMBL:ENSMUSG00000105042	MGI:5662646	unclassified gene	predicted gene 42509
5	gene	23.39928	23.40233	negative	MGI_C57BL6J_5826539	Gm46902	NCBI_Gene:108169030	MGI:5826539	lncRNA gene	predicted gene, 46902
5	gene	23.40428	23.40507	negative	MGI_C57BL6J_1920118	2900022P04Rik	NA	NA	unclassified gene	RIKEN cDNA 2900022P04 gene
5	gene	23.43313	23.50424	positive	MGI_C57BL6J_1924825	Kmt2e	NCBI_Gene:69188,ENSEMBL:ENSMUSG00000029004	MGI:1924825	protein coding gene	lysine (K)-specific methyltransferase 2E
5	gene	23.48739	23.48772	negative	MGI_C57BL6J_5454996	Gm25219	ENSEMBL:ENSMUSG00000088170	MGI:5454996	unclassified non-coding RNA gene	predicted gene, 25219
5	gene	23.50326	23.68464	negative	MGI_C57BL6J_1201408	Srpk2	NCBI_Gene:20817,ENSEMBL:ENSMUSG00000062604	MGI:1201408	protein coding gene	serine/arginine-rich protein specific kinase 2
5	gene	23.67429	23.67438	negative	MGI_C57BL6J_5453786	Gm24009	ENSEMBL:ENSMUSG00000088359	MGI:5453786	rRNA gene	predicted gene, 24009
5	gene	23.67474	23.67555	negative	MGI_C57BL6J_5663703	Gm43566	ENSEMBL:ENSMUSG00000105565	MGI:5663703	lncRNA gene	predicted gene 43566
5	gene	23.69226	23.71267	negative	MGI_C57BL6J_2140929	AI506816	NCBI_Gene:433855,ENSEMBL:ENSMUSG00000105987	MGI:2140929	lncRNA gene	expressed sequence AI506816
5	gene	23.70113	23.70311	negative	MGI_C57BL6J_5588938	Gm29779	NCBI_Gene:101056102	MGI:5588938	protein coding gene	predicted gene, 29779
5	gene	23.70322	23.70566	negative	MGI_C57BL6J_5625111	Gm42226	NCBI_Gene:105247050	MGI:5625111	protein coding gene	predicted gene, 42226
5	gene	23.71099	23.71106	negative	MGI_C57BL6J_6305329	Gm50451	ENSEMBL:ENSMUSG00000096832	MGI:6305329	snoRNA gene	predicted gene, 50451
5	gene	23.74017	23.78371	negative	MGI_C57BL6J_1925947	Pus7	NCBI_Gene:78697,ENSEMBL:ENSMUSG00000057541	MGI:1925947	protein coding gene	pseudouridylate synthase 7
5	gene	23.78767	23.82037	positive	MGI_C57BL6J_1916233	Rint1	NCBI_Gene:72772,ENSEMBL:ENSMUSG00000028999	MGI:1916233	protein coding gene	RAD50 interactor 1
5	gene	23.79070	23.79159	positive	MGI_C57BL6J_5663191	Gm43054	ENSEMBL:ENSMUSG00000104569	MGI:5663191	unclassified gene	predicted gene 43054
5	pseudogene	23.81562	23.83244	negative	MGI_C57BL6J_3036235	4933427G23Rik	NCBI_Gene:330053,ENSEMBL:ENSMUSG00000086697	MGI:3036235	pseudogene	RIKEN cDNA 4933427G23 gene
5	gene	23.83617	23.83632	negative	MGI_C57BL6J_5451831	Gm22054	ENSEMBL:ENSMUSG00000065329	MGI:5451831	snRNA gene	predicted gene, 22054
5	gene	23.83894	23.84416	negative	MGI_C57BL6J_1913419	Tomm7	NCBI_Gene:66169,ENSEMBL:ENSMUSG00000028998	MGI:1913419	protein coding gene	translocase of outer mitochondrial membrane 7
5	gene	23.84945	23.85277	negative	MGI_C57BL6J_5625113	Gm42228	NCBI_Gene:105247052	MGI:5625113	lncRNA gene	predicted gene, 42228
5	gene	23.85060	23.85504	positive	MGI_C57BL6J_1914444	2700038G22Rik	NCBI_Gene:67194,ENSEMBL:ENSMUSG00000097180	MGI:1914444	lncRNA gene	RIKEN cDNA 2700038G22 gene
5	gene	23.85221	23.85228	positive	MGI_C57BL6J_3819566	Snord93	NCBI_Gene:100217436,ENSEMBL:ENSMUSG00000095205	MGI:3819566	snoRNA gene	small nucleolar RNA, C/D box 93
5	gene	23.85808	23.86579	negative	MGI_C57BL6J_1920621	1700052K07Rik	NA	NA	unclassified gene	RIKEN cDNA 1700052K07 gene
5	pseudogene	23.86325	23.89265	negative	MGI_C57BL6J_3779943	Gm9534	NCBI_Gene:671410	MGI:3779943	pseudogene	predicted gene 9534
5	gene	23.91528	24.03078	negative	MGI_C57BL6J_2149839	Fam126a	NCBI_Gene:84652,ENSEMBL:ENSMUSG00000028995	MGI:2149839	protein coding gene	family with sequence similarity 126, member A
5	pseudogene	24.00963	24.01563	negative	MGI_C57BL6J_3648302	Gm6745	NCBI_Gene:627317,ENSEMBL:ENSMUSG00000105866	MGI:3648302	pseudogene	predicted gene 6745
5	pseudogene	24.08524	24.08575	positive	MGI_C57BL6J_5010223	Gm18038	NCBI_Gene:100416322,ENSEMBL:ENSMUSG00000106118	MGI:5010223	pseudogene	predicted gene, 18038
5	gene	24.10058	24.16336	positive	MGI_C57BL6J_1196453	Klhl7	NCBI_Gene:52323,ENSEMBL:ENSMUSG00000028986	MGI:1196453	protein coding gene	kelch-like 7
5	pseudogene	24.11779	24.11873	negative	MGI_C57BL6J_3804937	Gm3724	NCBI_Gene:100042211,ENSEMBL:ENSMUSG00000106133	MGI:3804937	pseudogene	predicted gene 3724
5	gene	24.15329	24.15589	positive	MGI_C57BL6J_5663526	Gm43389	ENSEMBL:ENSMUSG00000106665	MGI:5663526	unclassified gene	predicted gene 43389
5	gene	24.16462	24.18401	positive	MGI_C57BL6J_2387631	Nupl2	NCBI_Gene:231042,ENSEMBL:ENSMUSG00000048439	MGI:2387631	protein coding gene	nucleoporin like 2
5	pseudogene	24.20932	24.20972	negative	MGI_C57BL6J_3647974	Gm5575	NCBI_Gene:434047,ENSEMBL:ENSMUSG00000099891	MGI:3647974	pseudogene	predicted gene 5575
5	pseudogene	24.21788	24.23305	positive	MGI_C57BL6J_5663965	Gm43828	NCBI_Gene:108169093,ENSEMBL:ENSMUSG00000105141	MGI:5663965	pseudogene	predicted gene 43828
5	pseudogene	24.24051	24.24190	positive	MGI_C57BL6J_5663964	Gm43827	ENSEMBL:ENSMUSG00000105713	MGI:5663964	pseudogene	predicted gene 43827
5	pseudogene	24.25669	24.25766	positive	MGI_C57BL6J_3642194	Gm9836	NCBI_Gene:102636299,ENSEMBL:ENSMUSG00000081071	MGI:3642194	pseudogene	predicted pseudogene 9836
5	gene	24.30126	24.30648	positive	MGI_C57BL6J_5592635	Gm33476	NCBI_Gene:102636401	MGI:5592635	lncRNA gene	predicted gene, 33476
5	gene	24.31959	24.35168	negative	MGI_C57BL6J_1341722	Kcnh2	NCBI_Gene:16511,ENSEMBL:ENSMUSG00000038319	MGI:1341722	protein coding gene	potassium voltage-gated channel, subfamily H (eag-related), member 2
5	gene	24.33392	24.33722	positive	MGI_C57BL6J_3783037	Gm15589	ENSEMBL:ENSMUSG00000086729	MGI:3783037	lncRNA gene	predicted gene 15589
5	gene	24.36481	24.38447	positive	MGI_C57BL6J_97362	Nos3	NCBI_Gene:18127,ENSEMBL:ENSMUSG00000028978	MGI:97362	protein coding gene	nitric oxide synthase 3, endothelial cell
5	gene	24.36619	24.38361	negative	MGI_C57BL6J_3783035	Gm15587	ENSEMBL:ENSMUSG00000086769	MGI:3783035	lncRNA gene	predicted gene 15587
5	gene	24.38418	24.39214	negative	MGI_C57BL6J_2685420	Atg9b	NCBI_Gene:213948,ENSEMBL:ENSMUSG00000038295	MGI:2685420	protein coding gene	autophagy related 9B
5	gene	24.39366	24.41005	positive	MGI_C57BL6J_1351667	Abcb8	NCBI_Gene:74610,ENSEMBL:ENSMUSG00000028973	MGI:1351667	protein coding gene	ATP-binding cassette, sub-family B (MDR/TAP), member 8
5	gene	24.40760	24.42359	negative	MGI_C57BL6J_101765	Cdk5	NCBI_Gene:12568,ENSEMBL:ENSMUSG00000028969	MGI:101765	protein coding gene	cyclin-dependent kinase 5
5	gene	24.41029	24.41784	positive	MGI_C57BL6J_2159339	Asic3	NCBI_Gene:171209,ENSEMBL:ENSMUSG00000038276	MGI:2159339	protein coding gene	acid-sensing (proton-gated) ion channel 3
5	gene	24.42376	24.44095	positive	MGI_C57BL6J_109351	Slc4a2	NCBI_Gene:20535,ENSEMBL:ENSMUSG00000028962	MGI:109351	protein coding gene	solute carrier family 4 (anion exchanger), member 2
5	gene	24.43844	24.44529	negative	MGI_C57BL6J_1913837	Fastk	NCBI_Gene:66587,ENSEMBL:ENSMUSG00000028959	MGI:1913837	protein coding gene	Fas-activated serine/threonine kinase
5	gene	24.43849	24.43859	negative	MGI_C57BL6J_5452110	Gm22333	ENSEMBL:ENSMUSG00000088696	MGI:5452110	snRNA gene	predicted gene, 22333
5	gene	24.44546	24.44848	negative	MGI_C57BL6J_1923764	Tmub1	NCBI_Gene:64295,ENSEMBL:ENSMUSG00000028958	MGI:1923764	protein coding gene	transmembrane and ubiquitin-like domain containing 1
5	gene	24.44791	24.44849	positive	MGI_C57BL6J_1922838	2310074N15Rik	ENSEMBL:ENSMUSG00000105858	MGI:1922838	lncRNA gene	RIKEN cDNA 2310074N15 gene
5	gene	24.44961	24.45171	negative	MGI_C57BL6J_3642883	Gm10472	ENSEMBL:ENSMUSG00000104190	MGI:3642883	protein coding gene	predicted gene 10472
5	gene	24.45189	24.50205	positive	MGI_C57BL6J_2183446	Agap3	NCBI_Gene:213990,ENSEMBL:ENSMUSG00000023353	MGI:2183446	protein coding gene	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
5	gene	24.50276	24.52720	negative	MGI_C57BL6J_95667	Gbx1	NCBI_Gene:231044,ENSEMBL:ENSMUSG00000067724	MGI:95667	protein coding gene	gastrulation brain homeobox 1
5	gene	24.53270	24.54098	negative	MGI_C57BL6J_2152836	Asb10	NCBI_Gene:117590,ENSEMBL:ENSMUSG00000038204	MGI:2152836	protein coding gene	ankyrin repeat and SOCS box-containing 10
5	gene	24.54343	24.55681	negative	MGI_C57BL6J_3045319	Iqca1l	NCBI_Gene:231045,ENSEMBL:ENSMUSG00000038199	MGI:3045319	protein coding gene	IQ motif containing with AAA domain 1 like
5	gene	24.56534	24.57747	negative	MGI_C57BL6J_1351657	Abcf2	NCBI_Gene:27407,ENSEMBL:ENSMUSG00000028953	MGI:1351657	protein coding gene	ATP-binding cassette, sub-family F (GCN20), member 2
5	pseudogene	24.58145	24.58190	negative	MGI_C57BL6J_3708709	Gm10221	NCBI_Gene:100042348,ENSEMBL:ENSMUSG00000067719	MGI:3708709	pseudogene	predicted gene 10221
5	gene	24.58599	24.59456	positive	MGI_C57BL6J_1917522	Chpf2	NCBI_Gene:100910,ENSEMBL:ENSMUSG00000038181	MGI:1917522	protein coding gene	chondroitin polymerizing factor 2
5	gene	24.59082	24.62446	negative	MGI_C57BL6J_1914243	Smarcd3	NCBI_Gene:66993,ENSEMBL:ENSMUSG00000028949	MGI:1914243	protein coding gene	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
5	gene	24.59211	24.59221	positive	MGI_C57BL6J_3629656	Mir671	miRBase:MI0004133,NCBI_Gene:735264,ENSEMBL:ENSMUSG00000076387	MGI:3629656	miRNA gene	microRNA 671
5	pseudogene	24.64545	24.64886	positive	MGI_C57BL6J_1919502	1700022A21Rik	NCBI_Gene:72252,ENSEMBL:ENSMUSG00000038165	MGI:1919502	pseudogene	RIKEN cDNA 1700022A21 gene
5	gene	24.68553	24.71038	positive	MGI_C57BL6J_1889001	Nub1	NCBI_Gene:53312,ENSEMBL:ENSMUSG00000028954	MGI:1889001	protein coding gene	negative regulator of ubiquitin-like proteins 1
5	gene	24.69690	24.70469	negative	MGI_C57BL6J_5477142	Gm26648	ENSEMBL:ENSMUSG00000097275	MGI:5477142	lncRNA gene	predicted gene, 26648
5	gene	24.69952	24.73095	negative	MGI_C57BL6J_1915466	Wdr86	NCBI_Gene:269633,ENSEMBL:ENSMUSG00000055235	MGI:1915466	protein coding gene	WD repeat domain 86
5	gene	24.73095	24.74082	positive	MGI_C57BL6J_5625116	Gm42231	NCBI_Gene:105247056	MGI:5625116	lncRNA gene	predicted gene, 42231
5	gene	24.75100	24.75801	negative	MGI_C57BL6J_2449167	Crygn	NCBI_Gene:214301,ENSEMBL:ENSMUSG00000038135	MGI:2449167	protein coding gene	crystallin, gamma N
5	gene	24.75704	24.75881	positive	MGI_C57BL6J_5592750	Gm33591	NCBI_Gene:102636557	MGI:5592750	lncRNA gene	predicted gene, 33591
5	gene	24.80282	24.84262	negative	MGI_C57BL6J_97912	Rheb	NCBI_Gene:19744,ENSEMBL:ENSMUSG00000028945	MGI:97912	protein coding gene	Ras homolog enriched in brain
5	gene	24.82059	24.82084	negative	MGI_C57BL6J_5455140	Gm25363	ENSEMBL:ENSMUSG00000089475	MGI:5455140	unclassified non-coding RNA gene	predicted gene, 25363
5	gene	24.86274	25.10104	negative	MGI_C57BL6J_1336153	Prkag2	NCBI_Gene:108099,ENSEMBL:ENSMUSG00000028944	MGI:1336153	protein coding gene	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
5	gene	24.87354	24.87593	positive	MGI_C57BL6J_3783001	Prkag2os2	ENSEMBL:ENSMUSG00000087314	MGI:3783001	antisense lncRNA gene	protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 2
5	gene	24.90257	24.90685	positive	MGI_C57BL6J_1918411	Prkag2os1	NCBI_Gene:71161,ENSEMBL:ENSMUSG00000086446	MGI:1918411	antisense lncRNA gene	protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1
5	gene	24.90337	24.90416	negative	MGI_C57BL6J_1920169	2900019A20Rik	NA	NA	unclassified gene	RIKEN cDNA 2900019A20 gene
5	gene	24.98455	24.99817	positive	MGI_C57BL6J_1917508	1500035N22Rik	NCBI_Gene:70258,ENSEMBL:ENSMUSG00000059631	MGI:1917508	lncRNA gene	RIKEN cDNA 1500035N22 gene
5	gene	25.09775	25.10000	negative	MGI_C57BL6J_5625117	Gm42232	NCBI_Gene:105247057	MGI:5625117	lncRNA gene	predicted gene, 42232
5	gene	25.10097	25.11011	positive	MGI_C57BL6J_1914511	2900005J15Rik	NCBI_Gene:67261,ENSEMBL:ENSMUSG00000043833	MGI:1914511	lncRNA gene	RIKEN cDNA 2900005J15 gene
5	gene	25.11937	25.12832	positive	MGI_C57BL6J_5625118	Gm42233	NCBI_Gene:105247058	MGI:5625118	lncRNA gene	predicted gene, 42233
5	pseudogene	25.12614	25.12671	positive	MGI_C57BL6J_5011273	Gm19088	NCBI_Gene:100418232,ENSEMBL:ENSMUSG00000105763	MGI:5011273	pseudogene	predicted gene, 19088
5	gene	25.16783	25.17541	positive	MGI_C57BL6J_5592995	Gm33836	NCBI_Gene:102636886	MGI:5592995	lncRNA gene	predicted gene, 33836
5	gene	25.16837	25.16846	negative	MGI_C57BL6J_5455828	Gm26051	ENSEMBL:ENSMUSG00000077832	MGI:5455828	miRNA gene	predicted gene, 26051
5	gene	25.18144	25.22030	positive	MGI_C57BL6J_1915159	Galntl5	NCBI_Gene:67909,ENSEMBL:ENSMUSG00000028938	MGI:1915159	protein coding gene	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5
5	gene	25.18836	25.18864	negative	MGI_C57BL6J_5456133	Gm26356	ENSEMBL:ENSMUSG00000088842	MGI:5456133	unclassified non-coding RNA gene	predicted gene, 26356
5	gene	25.22190	25.26592	positive	MGI_C57BL6J_2444392	Galnt11	NCBI_Gene:231050,ENSEMBL:ENSMUSG00000038072	MGI:2444392	protein coding gene	polypeptide N-acetylgalactosaminyltransferase 11
5	gene	25.22285	25.22315	negative	MGI_C57BL6J_1925120	E130116L18Rik	ENSEMBL:ENSMUSG00000054116	MGI:1925120	protein coding gene	RIKEN cDNA E130116L18 gene
5	gene	25.27179	25.49882	negative	MGI_C57BL6J_2444959	Kmt2c	NCBI_Gene:231051,ENSEMBL:ENSMUSG00000038056	MGI:2444959	protein coding gene	lysine (K)-specific methyltransferase 2C
5	gene	25.36902	25.37304	positive	MGI_C57BL6J_5662722	Gm42585	ENSEMBL:ENSMUSG00000106457	MGI:5662722	unclassified gene	predicted gene 42585
5	pseudogene	25.39157	25.39201	positive	MGI_C57BL6J_1935163	Hspe1-ps3	NCBI_Gene:102640385,ENSEMBL:ENSMUSG00000092344	MGI:1935163	pseudogene	heat shock protein 1 (chaperonin 10), pseudogene 3
5	pseudogene	25.43304	25.43329	negative	MGI_C57BL6J_5141897	Gm20432	ENSEMBL:ENSMUSG00000092181	MGI:5141897	pseudogene	predicted gene 20432
5	pseudogene	25.45030	25.45091	positive	MGI_C57BL6J_5010528	Gm18343	NCBI_Gene:100416974,ENSEMBL:ENSMUSG00000092510	MGI:5010528	pseudogene	predicted gene, 18343
5	gene	25.49907	25.50447	positive	MGI_C57BL6J_2445144	4831440E17Rik	NCBI_Gene:320965,ENSEMBL:ENSMUSG00000097236	MGI:2445144	lncRNA gene	RIKEN cDNA 4831440E17 gene
5	gene	25.51086	25.51103	positive	MGI_C57BL6J_5452433	Gm22656	ENSEMBL:ENSMUSG00000077387	MGI:5452433	snRNA gene	predicted gene, 22656
5	gene	25.51607	25.51803	positive	MGI_C57BL6J_2685289	Cct8l1	NCBI_Gene:242891,ENSEMBL:ENSMUSG00000038044	MGI:2685289	protein coding gene	chaperonin containing TCP1, subunit 8 (theta)-like 1
5	gene	25.53001	25.53147	positive	MGI_C57BL6J_1920821	1700096K18Rik	NCBI_Gene:73571,ENSEMBL:ENSMUSG00000101856	MGI:1920821	lncRNA gene	RIKEN cDNA 1700096K18 gene
5	pseudogene	25.53216	25.53243	negative	MGI_C57BL6J_5663278	Gm43141	ENSEMBL:ENSMUSG00000105744	MGI:5663278	pseudogene	predicted gene 43141
5	gene	25.60737	25.63144	negative	MGI_C57BL6J_5826540	Gm46903	NCBI_Gene:108169031	MGI:5826540	lncRNA gene	predicted gene, 46903
5	gene	25.61446	25.62694	positive	MGI_C57BL6J_5625120	Gm42235	NCBI_Gene:105247060	MGI:5625120	lncRNA gene	predicted gene, 42235
5	gene	25.63985	25.64832	positive	MGI_C57BL6J_5625119	Gm42234	NCBI_Gene:105247059	MGI:5625119	lncRNA gene	predicted gene, 42234
5	gene	25.65981	25.66128	negative	MGI_C57BL6J_3641967	Gm10062	NCBI_Gene:100038373,ENSEMBL:ENSMUSG00000059244	MGI:3641967	lncRNA gene	predicted gene 10062
5	gene	25.65981	25.66127	positive	MGI_C57BL6J_5690364	Gm43972	ENSEMBL:ENSMUSG00000106144	MGI:5690364	lncRNA gene	predicted gene, 43972
5	gene	25.67773	25.68120	negative	MGI_C57BL6J_2443385	A630024J24Rik	NA	NA	unclassified gene	RIKEN cDNA A630024J24 gene
5	gene	25.68737	25.68940	negative	MGI_C57BL6J_5663280	Gm43143	ENSEMBL:ENSMUSG00000106241	MGI:5663280	unclassified gene	predicted gene 43143
5	gene	25.68981	25.70583	negative	MGI_C57BL6J_1927345	Xrcc2	NCBI_Gene:57434,ENSEMBL:ENSMUSG00000028933	MGI:1927345	protein coding gene	X-ray repair complementing defective repair in Chinese hamster cells 2
5	pseudogene	25.71023	25.71059	positive	MGI_C57BL6J_5663279	Gm43142	ENSEMBL:ENSMUSG00000104549	MGI:5663279	pseudogene	predicted gene 43142
5	gene	25.75997	25.85069	positive	MGI_C57BL6J_2661120	Actr3b	NCBI_Gene:242894,ENSEMBL:ENSMUSG00000056367	MGI:2661120	protein coding gene	ARP3 actin-related protein 3B
5	gene	25.76770	25.77731	positive	MGI_C57BL6J_5625122	Gm42237	NCBI_Gene:105247062	MGI:5625122	lncRNA gene	predicted gene, 42237
5	gene	25.91963	25.92629	negative	MGI_C57BL6J_5435010	Gm21655	NCBI_Gene:100862339,ENSEMBL:ENSMUSG00000105052	MGI:5435010	lncRNA gene	predicted gene, 21655
5	gene	25.93579	25.94253	negative	MGI_C57BL6J_5435018	Gm21663	NCBI_Gene:100862349,ENSEMBL:ENSMUSG00000104824	MGI:5435018	protein coding gene	predicted gene, 21663
5	gene	25.94825	25.95442	negative	MGI_C57BL6J_5435026	Gm21671	NCBI_Gene:100862359,ENSEMBL:ENSMUSG00000095550	MGI:5435026	protein coding gene	predicted gene, 21671
5	pseudogene	25.95542	25.95929	positive	MGI_C57BL6J_5434523	Gm21168	NCBI_Gene:100861728,ENSEMBL:ENSMUSG00000104651	MGI:5434523	pseudogene	predicted gene, 21168
5	gene	25.96263	25.97266	negative	MGI_C57BL6J_5435035	Gm21680	NCBI_Gene:100862368,ENSEMBL:ENSMUSG00000106627	MGI:5435035	protein coding gene	predicted gene, 21680
5	gene	25.96385	26.09836	positive	MGI_C57BL6J_2442705	E330037M01Rik	NA	NA	unclassified gene	RIKEN cDNA E330037M01 gene
5	gene	25.96909	25.97459	positive	MGI_C57BL6J_5826541	Gm46904	NCBI_Gene:108169032	MGI:5826541	lncRNA gene	predicted gene, 46904
5	gene	25.98203	25.98865	negative	MGI_C57BL6J_5435053	Gm21698	NCBI_Gene:100862388,ENSEMBL:ENSMUSG00000096045	MGI:5435053	protein coding gene	predicted gene, 21698
5	gene	25.99902	26.00480	negative	MGI_C57BL6J_3780148	Gm1979	NCBI_Gene:100038949,ENSEMBL:ENSMUSG00000091049	MGI:3780148	protein coding gene	predicted gene 1979
5	pseudogene	26.00701	26.01177	positive	MGI_C57BL6J_3644982	Gm5067	NCBI_Gene:272714,ENSEMBL:ENSMUSG00000090671	MGI:3644982	pseudogene	predicted gene 5067
5	gene	26.01728	26.02292	negative	MGI_C57BL6J_3645135	Gm5862	NCBI_Gene:545739,ENSEMBL:ENSMUSG00000067700	MGI:3645135	protein coding gene	predicted gene 5862
5	gene	26.03285	26.03956	negative	MGI_C57BL6J_1922907	Speer4a	NCBI_Gene:75657,ENSEMBL:ENSMUSG00000073119	MGI:1922907	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4A
5	gene	26.05188	26.05858	negative	MGI_C57BL6J_3645983	Gm7347	NCBI_Gene:664804,ENSEMBL:ENSMUSG00000073117	MGI:3645983	protein coding gene	predicted gene 7347
5	pseudogene	26.07044	26.07147	positive	MGI_C57BL6J_3647070	Gm6089	NCBI_Gene:619645,ENSEMBL:ENSMUSG00000105422	MGI:3647070	pseudogene	predicted gene 6089
5	gene	26.08217	26.08929	negative	MGI_C57BL6J_3641900	Gm10471	NCBI_Gene:100039045,ENSEMBL:ENSMUSG00000073116	MGI:3641900	protein coding gene	predicted gene 10471
5	gene	26.09867	26.10536	negative	MGI_C57BL6J_3036277	5031410I06Rik	NCBI_Gene:381622,ENSEMBL:ENSMUSG00000051940	MGI:3036277	protein coding gene	RIKEN cDNA 5031410I06 gene
5	gene	26.10416	26.10964	positive	MGI_C57BL6J_5826542	Gm46905	NCBI_Gene:108169033	MGI:5826542	lncRNA gene	predicted gene, 46905
5	gene	26.11476	26.12142	negative	MGI_C57BL6J_3798181	Gm10220	NCBI_Gene:434689,ENSEMBL:ENSMUSG00000067698	MGI:3798181	protein coding gene	predicted gene 10220
5	gene	26.12014	26.12427	positive	MGI_C57BL6J_5826543	Gm46906	NCBI_Gene:108169034	MGI:5826543	lncRNA gene	predicted gene, 46906
5	gene	26.14287	26.16684	positive	MGI_C57BL6J_5593226	Gm34067	NCBI_Gene:102637190	MGI:5593226	lncRNA gene	predicted gene, 34067
5	gene	26.17819	26.26431	positive	MGI_C57BL6J_3805965	Gm7361	NCBI_Gene:664837,ENSEMBL:ENSMUSG00000059645	MGI:3805965	protein coding gene	predicted gene 7361
5	pseudogene	26.35529	26.35887	positive	MGI_C57BL6J_5011142	Gm18957	NCBI_Gene:100418033,ENSEMBL:ENSMUSG00000105786	MGI:5011142	pseudogene	predicted gene, 18957
5	gene	26.38928	26.40386	positive	MGI_C57BL6J_5593695	Gm34536	NCBI_Gene:102637823	MGI:5593695	lncRNA gene	predicted gene, 34536
5	gene	26.46007	26.49331	negative	MGI_C57BL6J_1923192	4930584F24Rik	NCBI_Gene:75942,ENSEMBL:ENSMUSG00000029044	MGI:1923192	lncRNA gene	RIKEN cDNA 4930584F24 gene
5	pseudogene	26.59944	26.59955	positive	MGI_C57BL6J_5662981	Gm42844	ENSEMBL:ENSMUSG00000105491	MGI:5662981	pseudogene	predicted gene 42844
5	gene	26.81720	27.72751	positive	MGI_C57BL6J_94921	Dpp6	NCBI_Gene:13483,ENSEMBL:ENSMUSG00000061576	MGI:94921	protein coding gene	dipeptidylpeptidase 6
5	pseudogene	26.82214	26.90513	negative	MGI_C57BL6J_5588943	Gm29784	NCBI_Gene:105247067,ENSEMBL:ENSMUSG00000104733	MGI:5588943	pseudogene	predicted gene, 29784
5	pseudogene	26.85997	26.86010	negative	MGI_C57BL6J_3802028	Gm16056	ENSEMBL:ENSMUSG00000080941	MGI:3802028	pseudogene	predicted gene 16056
5	gene	26.95115	26.96788	negative	MGI_C57BL6J_5826581	Gm46944	NCBI_Gene:108169119	MGI:5826581	lncRNA gene	predicted gene, 46944
5	pseudogene	27.00594	27.00762	negative	MGI_C57BL6J_3802027	Gm16057	ENSEMBL:ENSMUSG00000081970	MGI:3802027	pseudogene	predicted gene 16057
5	gene	27.19596	27.19887	positive	MGI_C57BL6J_5663913	Gm43776	ENSEMBL:ENSMUSG00000105946	MGI:5663913	unclassified gene	predicted gene 43776
5	gene	27.21818	27.22078	positive	MGI_C57BL6J_5663639	Gm43502	ENSEMBL:ENSMUSG00000106537	MGI:5663639	unclassified gene	predicted gene 43502
5	gene	27.28144	27.28436	negative	MGI_C57BL6J_5593759	Gm34600	NCBI_Gene:102637904	MGI:5593759	lncRNA gene	predicted gene, 34600
5	gene	27.49564	27.50144	negative	MGI_C57BL6J_1920776	Speer4b	NCBI_Gene:73526,ENSEMBL:ENSMUSG00000048703	MGI:1920776	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4B
5	gene	27.55255	27.55564	negative	MGI_C57BL6J_3802026	Gm16058	NCBI_Gene:105247065,ENSEMBL:ENSMUSG00000086505	MGI:3802026	lncRNA gene	predicted gene 16058
5	gene	27.74008	27.79181	negative	MGI_C57BL6J_1890430	Paxip1	NCBI_Gene:55982,ENSEMBL:ENSMUSG00000002221	MGI:1890430	protein coding gene	PAX interacting (with transcription-activation domain) protein 1
5	pseudogene	27.81749	27.81797	positive	MGI_C57BL6J_5663570	Gm43433	ENSEMBL:ENSMUSG00000105223	MGI:5663570	pseudogene	predicted gene 43433
5	pseudogene	27.81752	27.82195	positive	MGI_C57BL6J_5012424	Gm20239	NCBI_Gene:100504465,ENSEMBL:ENSMUSG00000105375	MGI:5012424	pseudogene	predicted gene, 20239
5	gene	27.84170	27.85509	positive	MGI_C57BL6J_96283	Htr5a	NCBI_Gene:15563,ENSEMBL:ENSMUSG00000039106	MGI:96283	protein coding gene	5-hydroxytryptamine (serotonin) receptor 5A
5	pseudogene	27.86002	27.86044	negative	MGI_C57BL6J_5663233	Gm43096	ENSEMBL:ENSMUSG00000104882	MGI:5663233	pseudogene	predicted gene 43096
5	pseudogene	27.86045	27.86122	positive	MGI_C57BL6J_3642937	Gm5551	NCBI_Gene:433862,ENSEMBL:ENSMUSG00000106390	MGI:3642937	pseudogene	predicted gene 5551
5	gene	27.95198	27.97734	positive	MGI_C57BL6J_4937329	Gm17695	NCBI_Gene:102638085	MGI:4937329	protein coding gene	predicted gene, 17695
5	pseudogene	27.99983	28.00141	negative	MGI_C57BL6J_3647137	Gm4865	NCBI_Gene:231069,ENSEMBL:ENSMUSG00000104777	MGI:3647137	pseudogene	predicted gene 4865
5	gene	28.00594	28.12393	negative	MGI_C57BL6J_5594382	Gm35223	NCBI_Gene:102638729	MGI:5594382	lncRNA gene	predicted gene, 35223
5	gene	28.01947	28.07110	negative	MGI_C57BL6J_5477102	Gm26608	NCBI_Gene:102638633,ENSEMBL:ENSMUSG00000097673	MGI:5477102	lncRNA gene	predicted gene, 26608
5	gene	28.03205	28.03641	negative	MGI_C57BL6J_5663748	Gm43611	ENSEMBL:ENSMUSG00000106030	MGI:5663748	unclassified gene	predicted gene 43611
5	gene	28.07136	28.07866	positive	MGI_C57BL6J_1916289	Insig1	NCBI_Gene:231070,ENSEMBL:ENSMUSG00000045294	MGI:1916289	protein coding gene	insulin induced gene 1
5	gene	28.11678	28.12165	positive	MGI_C57BL6J_5594214	Gm35055	NCBI_Gene:102638509	MGI:5594214	lncRNA gene	predicted gene, 35055
5	gene	28.16569	28.17217	positive	MGI_C57BL6J_95390	En2	NCBI_Gene:13799,ENSEMBL:ENSMUSG00000039095	MGI:95390	protein coding gene	engrailed 2
5	gene	28.16848	28.16884	positive	MGI_C57BL6J_1891058	Mym	NA	NA	unclassified gene	myocyte maintenance
5	gene	28.16848	28.16884	negative	MGI_C57BL6J_5663747	Gm43610	ENSEMBL:ENSMUSG00000106160	MGI:5663747	unclassified gene	predicted gene 43610
5	gene	28.17821	28.18795	positive	MGI_C57BL6J_5625127	Gm42242	NCBI_Gene:105247069	MGI:5625127	lncRNA gene	predicted gene, 42242
5	gene	28.18957	28.20074	positive	MGI_C57BL6J_5594554	Gm35395	NCBI_Gene:102638961	MGI:5594554	lncRNA gene	predicted gene, 35395
5	gene	28.20082	28.24581	negative	MGI_C57BL6J_2442451	Cnpy1	NCBI_Gene:269637,ENSEMBL:ENSMUSG00000044681	MGI:2442451	protein coding gene	canopy FGF signaling regulator 1
5	gene	28.28969	28.29335	negative	MGI_C57BL6J_5594683	Gm35524	NCBI_Gene:102639141	MGI:5594683	lncRNA gene	predicted gene, 35524
5	gene	28.29737	28.31673	negative	MGI_C57BL6J_5594761	Gm35602	NCBI_Gene:102639248	MGI:5594761	lncRNA gene	predicted gene, 35602
5	gene	28.31689	28.41924	positive	MGI_C57BL6J_1919670	Rbm33	NCBI_Gene:381626,ENSEMBL:ENSMUSG00000048271	MGI:1919670	protein coding gene	RNA binding motif protein 33
5	gene	28.32247	28.32702	positive	MGI_C57BL6J_2444653	B930032E21Rik	NA	NA	unclassified gene	RIKEN cDNA B930032E21 gene
5	gene	28.45681	28.46726	negative	MGI_C57BL6J_98297	Shh	NCBI_Gene:20423,ENSEMBL:ENSMUSG00000002633	MGI:98297	protein coding gene	sonic hedgehog
5	gene	28.45827	28.93399	positive	MGI_C57BL6J_2444607	9530036O11Rik	NCBI_Gene:654796,ENSEMBL:ENSMUSG00000097726	MGI:2444607	lncRNA gene	RIKEN cDNA 9530036O11Rik
5	gene	28.46637	28.48097	positive	MGI_C57BL6J_5477388	Gm26894	ENSEMBL:ENSMUSG00000097453	MGI:5477388	lncRNA gene	predicted gene, 26894
5	pseudogene	28.53855	28.53978	positive	MGI_C57BL6J_3642597	Gm10290	NCBI_Gene:100039258,ENSEMBL:ENSMUSG00000105775	MGI:3642597	pseudogene	predicted pseudogene 10290
5	gene	28.57727	28.57896	positive	MGI_C57BL6J_5663298	Gm43161	ENSEMBL:ENSMUSG00000104587	MGI:5663298	unclassified gene	predicted gene 43161
5	gene	28.84066	28.85843	positive	MGI_C57BL6J_5625128	Gm42243	NCBI_Gene:105247070	MGI:5625128	lncRNA gene	predicted gene, 42243
5	gene	28.89038	29.00472	negative	MGI_C57BL6J_5594847	Gm35688	NCBI_Gene:102639355	MGI:5594847	lncRNA gene	predicted gene, 35688
5	gene	29.00845	29.01053	positive	MGI_C57BL6J_5595040	Gm35881	NCBI_Gene:102639611	MGI:5595040	lncRNA gene	predicted gene, 35881
5	gene	29.19518	29.22846	positive	MGI_C57BL6J_1861747	Rnf32	NCBI_Gene:56874,ENSEMBL:ENSMUSG00000029130	MGI:1861747	protein coding gene	ring finger protein 32
5	pseudogene	29.21763	29.21880	positive	MGI_C57BL6J_3647909	Gm7420	NCBI_Gene:664949,ENSEMBL:ENSMUSG00000089975	MGI:3647909	pseudogene	predicted gene 7420
5	gene	29.22629	29.22695	negative	MGI_C57BL6J_1918181	4921534E14Rik	NA	NA	unclassified gene	RIKEN cDNA 4921534E14 gene
5	gene	29.22980	29.37840	negative	MGI_C57BL6J_1861746	Lmbr1	NCBI_Gene:56873,ENSEMBL:ENSMUSG00000010721	MGI:1861746	protein coding gene	limb region 1
5	gene	29.27176	29.27413	negative	MGI_C57BL6J_5625129	Gm42244	NCBI_Gene:105247071	MGI:5625129	lncRNA gene	predicted gene, 42244
5	gene	29.27600	29.28030	negative	MGI_C57BL6J_2141307	C79130	ENSEMBL:ENSMUSG00000105741	MGI:2141307	protein coding gene	expressed sequence C79130
5	gene	29.33678	29.33685	negative	MGI_C57BL6J_5453578	Gm23801	ENSEMBL:ENSMUSG00000093302	MGI:5453578	miRNA gene	predicted gene, 23801
5	gene	29.37870	29.39049	positive	MGI_C57BL6J_1925513	4632411P08Rik	ENSEMBL:ENSMUSG00000097561	MGI:1925513	lncRNA gene	RIKEN cDNA 4632411P08 gene
5	gene	29.38686	29.38830	negative	MGI_C57BL6J_5595245	Gm36086	NCBI_Gene:102639878	MGI:5595245	lncRNA gene	predicted gene, 36086
5	gene	29.43466	29.45784	positive	MGI_C57BL6J_1861749	Nom1	NCBI_Gene:433864,ENSEMBL:ENSMUSG00000001569	MGI:1861749	protein coding gene	nucleolar protein with MIF4G domain 1
5	gene	29.47303	29.47847	negative	MGI_C57BL6J_109160	Mnx1	NCBI_Gene:15285,ENSEMBL:ENSMUSG00000001566	MGI:109160	protein coding gene	motor neuron and pancreas homeobox 1
5	gene	29.48153	29.48163	negative	MGI_C57BL6J_5454315	Gm24538	ENSEMBL:ENSMUSG00000093875	MGI:5454315	snRNA gene	predicted gene, 24538
5	pseudogene	29.53795	29.53862	positive	MGI_C57BL6J_3779550	Gm6083	NCBI_Gene:619355,ENSEMBL:ENSMUSG00000078182	MGI:3779550	pseudogene	predicted gene 6083
5	gene	29.56924	29.67609	positive	MGI_C57BL6J_2140998	Ube3c	NCBI_Gene:100763,ENSEMBL:ENSMUSG00000039000	MGI:2140998	protein coding gene	ubiquitin protein ligase E3C
5	gene	29.68478	29.69999	negative	MGI_C57BL6J_5625130	Gm42245	NCBI_Gene:105247072	MGI:5625130	lncRNA gene	predicted gene, 42245
5	pseudogene	29.69142	29.69171	positive	MGI_C57BL6J_5662707	Gm42570	ENSEMBL:ENSMUSG00000104648	MGI:5662707	pseudogene	predicted gene 42570
5	gene	29.70963	29.70996	positive	MGI_C57BL6J_5456123	Gm26346	ENSEMBL:ENSMUSG00000088150	MGI:5456123	unclassified non-coding RNA gene	predicted gene, 26346
5	pseudogene	29.71923	29.71979	negative	MGI_C57BL6J_5663254	Gm43117	NCBI_Gene:108169106,ENSEMBL:ENSMUSG00000105032	MGI:5663254	pseudogene	predicted gene 43117
5	gene	29.73533	29.73594	negative	MGI_C57BL6J_3648499	Gm5129	NCBI_Gene:332993,ENSEMBL:ENSMUSG00000053121	MGI:3648499	lncRNA gene	predicted gene 5129
5	gene	29.73569	29.81813	positive	MGI_C57BL6J_1344381	Dnajb6	NCBI_Gene:23950,ENSEMBL:ENSMUSG00000029131	MGI:1344381	protein coding gene	DnaJ heat shock protein family (Hsp40) member B6
5	gene	29.75440	29.75567	positive	MGI_C57BL6J_5595310	Gm36151	NA	NA	lncRNA gene	predicted gene%2c 36151
5	gene	29.78769	29.78938	positive	MGI_C57BL6J_2442227	C130031E09Rik	NA	NA	unclassified gene	RIKEN cDNA C130031E09 gene
5	pseudogene	29.79419	29.79552	negative	MGI_C57BL6J_3643001	Gm5552	NCBI_Gene:102640024,ENSEMBL:ENSMUSG00000106558	MGI:3643001	pseudogene	predicted gene 5552
5	pseudogene	29.80646	29.80816	negative	MGI_C57BL6J_3780383	Gm2213	NCBI_Gene:100039405,ENSEMBL:ENSMUSG00000105999	MGI:3780383	pseudogene	predicted gene 2213
5	pseudogene	29.83173	29.83342	negative	MGI_C57BL6J_3780138	Gm1969	NCBI_Gene:100034662,ENSEMBL:ENSMUSG00000106551	MGI:3780138	pseudogene	predicted gene 1969
5	gene	29.88673	29.89196	negative	MGI_C57BL6J_5662587	Gm42450	ENSEMBL:ENSMUSG00000105437	MGI:5662587	lncRNA gene	predicted gene 42450
5	gene	29.94672	29.95072	negative	MGI_C57BL6J_5663523	Gm43386	ENSEMBL:ENSMUSG00000105926	MGI:5663523	unclassified gene	predicted gene 43386
5	gene	29.94672	29.95072	positive	MGI_C57BL6J_3641993	Gm10469	NA	NA	protein coding gene	predicted gene 10469
5	gene	29.99614	30.03099	negative	MGI_C57BL6J_2141280	A230098N10Rik	NCBI_Gene:97209,ENSEMBL:ENSMUSG00000105439	MGI:2141280	lncRNA gene	RIKEN cDNA A230098N10 gene
5	gene	30.01311	30.01998	positive	MGI_C57BL6J_96559	Il6	NCBI_Gene:16193,ENSEMBL:ENSMUSG00000025746	MGI:96559	protein coding gene	interleukin 6
5	gene	30.03847	30.03928	negative	MGI_C57BL6J_1925948	C330025O08Rik	NA	NA	unclassified gene	RIKEN cDNA C330025O08 gene
5	gene	30.03855	30.07362	negative	MGI_C57BL6J_98878	Tyms	NCBI_Gene:22171,ENSEMBL:ENSMUSG00000025747	MGI:98878	protein coding gene	thymidylate synthase
5	pseudogene	30.09294	30.09769	positive	MGI_C57BL6J_3645260	Gm4961	NCBI_Gene:242914,ENSEMBL:ENSMUSG00000104667	MGI:3645260	pseudogene	predicted pseudogene 4961
5	pseudogene	30.09604	30.09726	negative	MGI_C57BL6J_5434374	Gm21019	NCBI_Gene:100534297	MGI:5434374	pseudogene	predicted gene, 21019
5	gene	30.10358	30.10609	negative	MGI_C57BL6J_3641994	3110082J24Rik	NCBI_Gene:433868,ENSEMBL:ENSMUSG00000086815	MGI:3641994	protein coding gene	RIKEN cDNA 3110082J24 gene
5	gene	30.10516	30.11838	positive	MGI_C57BL6J_2685290	Garem2	NCBI_Gene:242915,ENSEMBL:ENSMUSG00000044576	MGI:2685290	protein coding gene	GRB2 associated regulator of MAPK1 subtype 2
5	gene	30.11830	30.15516	negative	MGI_C57BL6J_2135593	Hadha	NCBI_Gene:97212,ENSEMBL:ENSMUSG00000025745	MGI:2135593	protein coding gene	hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit
5	gene	30.15525	30.18459	positive	MGI_C57BL6J_2136381	Hadhb	NCBI_Gene:231086,ENSEMBL:ENSMUSG00000059447	MGI:2136381	protein coding gene	hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
5	gene	30.17074	30.17082	positive	MGI_C57BL6J_3837202	Mir1960	miRBase:MI0009957,NCBI_Gene:100316709,ENSEMBL:ENSMUSG00000088113	MGI:3837202	miRNA gene	microRNA 1960
5	gene	30.19271	30.20575	negative	MGI_C57BL6J_2685887	Adgrf3	NCBI_Gene:381628,ENSEMBL:ENSMUSG00000067642	MGI:2685887	protein coding gene	adhesion G protein-coupled receptor F3
5	gene	30.20667	30.20734	positive	MGI_C57BL6J_1925826	D730001M18Rik	NA	NA	unclassified gene	RIKEN cDNA D730001M18 gene
5	gene	30.23258	30.27243	positive	MGI_C57BL6J_107898	Selenoi	NCBI_Gene:28042,ENSEMBL:ENSMUSG00000075703	MGI:107898	protein coding gene	selenoprotein I
5	pseudogene	30.24003	30.24064	negative	MGI_C57BL6J_3826608	Gm16288	NCBI_Gene:108169035,ENSEMBL:ENSMUSG00000085099	MGI:3826608	pseudogene	predicted gene 16288
5	gene	30.28114	30.36671	positive	MGI_C57BL6J_2685906	Drc1	NCBI_Gene:381738,ENSEMBL:ENSMUSG00000073102	MGI:2685906	protein coding gene	dynein regulatory complex subunit 1
5	gene	30.36605	30.36649	positive	MGI_C57BL6J_5663892	Gm43755	ENSEMBL:ENSMUSG00000106311	MGI:5663892	lncRNA gene	predicted gene 43755
5	gene	30.36706	30.46273	negative	MGI_C57BL6J_1891247	Otof	NCBI_Gene:83762,ENSEMBL:ENSMUSG00000062372	MGI:1891247	protein coding gene	otoferlin
5	gene	30.46603	30.48409	positive	MGI_C57BL6J_1922684	1700001C02Rik	NCBI_Gene:75434,ENSEMBL:ENSMUSG00000029182	MGI:1922684	protein coding gene	RIKEN cDNA 1700001C02 gene
5	gene	30.48558	30.54584	negative	MGI_C57BL6J_1920509	Cib4	NCBI_Gene:73259,ENSEMBL:ENSMUSG00000053194	MGI:1920509	protein coding gene	calcium and integrin binding family member 4
5	gene	30.51458	30.51468	negative	MGI_C57BL6J_5455443	Gm25666	ENSEMBL:ENSMUSG00000088327	MGI:5455443	snRNA gene	predicted gene, 25666
5	gene	30.52946	30.54383	positive	MGI_C57BL6J_5662902	Gm42765	ENSEMBL:ENSMUSG00000106300	MGI:5662902	lncRNA gene	predicted gene 42765
5	gene	30.54625	30.55275	positive	MGI_C57BL6J_5623157	Gm40272	NCBI_Gene:105244714	MGI:5623157	lncRNA gene	predicted gene, 40272
5	gene	30.57399	30.58862	negative	MGI_C57BL6J_3708711	Gm9899	NCBI_Gene:100502829,ENSEMBL:ENSMUSG00000053214	MGI:3708711	lncRNA gene	predicted gene 9899
5	gene	30.58817	30.62527	positive	MGI_C57BL6J_1100509	Kcnk3	NCBI_Gene:16527,ENSEMBL:ENSMUSG00000049265	MGI:1100509	protein coding gene	potassium channel, subfamily K, member 3
5	gene	30.64793	30.65973	positive	MGI_C57BL6J_1922169	Slc35f6	NCBI_Gene:74919,ENSEMBL:ENSMUSG00000029175	MGI:1922169	protein coding gene	solute carrier family 35, member F6
5	gene	30.64794	30.64802	positive	MGI_C57BL6J_5453707	Mir5625	miRBase:MI0019194,NCBI_Gene:100885838,ENSEMBL:ENSMUSG00000093710	MGI:5453707	miRNA gene	microRNA 5625
5	gene	30.66678	30.67484	positive	MGI_C57BL6J_88375	Cenpa	NCBI_Gene:12615,ENSEMBL:ENSMUSG00000029177	MGI:88375	protein coding gene	centromere protein A
5	pseudogene	30.68760	30.68817	positive	MGI_C57BL6J_5010574	Gm18389	NCBI_Gene:100417058	MGI:5010574	pseudogene	predicted gene, 18389
5	gene	30.71156	30.79938	positive	MGI_C57BL6J_1929772	Dpysl5	NCBI_Gene:65254,ENSEMBL:ENSMUSG00000029168	MGI:1929772	protein coding gene	dihydropyrimidinase-like 5
5	gene	30.75903	30.76048	positive	MGI_C57BL6J_5662901	Gm42764	ENSEMBL:ENSMUSG00000106173	MGI:5662901	lncRNA gene	predicted gene 42764
5	gene	30.79923	30.81459	negative	MGI_C57BL6J_5826544	Gm46907	NCBI_Gene:108169036	MGI:5826544	lncRNA gene	predicted gene, 46907
5	gene	30.81461	30.86611	positive	MGI_C57BL6J_2140967	Mapre3	NCBI_Gene:100732,ENSEMBL:ENSMUSG00000029166	MGI:2140967	protein coding gene	microtubule-associated protein, RP/EB family, member 3
5	gene	30.81562	30.81848	positive	MGI_C57BL6J_5011594	Gm19409	ENSEMBL:ENSMUSG00000106229	MGI:5011594	lncRNA gene	predicted gene, 19409
5	gene	30.81798	30.82261	negative	MGI_C57BL6J_3705274	Gm15461	ENSEMBL:ENSMUSG00000087258	MGI:3705274	lncRNA gene	predicted gene 15461
5	gene	30.86801	30.87918	positive	MGI_C57BL6J_1916046	Tmem214	NCBI_Gene:68796,ENSEMBL:ENSMUSG00000038828	MGI:1916046	protein coding gene	transmembrane protein 214
5	gene	30.86876	30.87083	negative	MGI_C57BL6J_5663945	Gm43808	ENSEMBL:ENSMUSG00000107086	MGI:5663945	unclassified gene	predicted gene 43808
5	gene	30.88616	30.88889	negative	MGI_C57BL6J_5594954	Gm35795	NCBI_Gene:102639492	MGI:5594954	lncRNA gene	predicted gene, 35795
5	gene	30.88808	30.88817	positive	MGI_C57BL6J_4414082	n-TYgta9	NCBI_Gene:102467398	MGI:4414082	tRNA gene	nuclear encoded tRNA tyrosine 9 (anticodon GTA)
5	gene	30.88849	30.90696	positive	MGI_C57BL6J_2441745	Agbl5	NCBI_Gene:231093,ENSEMBL:ENSMUSG00000029165	MGI:2441745	protein coding gene	ATP/GTP binding protein-like 5
5	gene	30.88852	30.88859	positive	MGI_C57BL6J_4413688	n-TAagc15	NCBI_Gene:102467453	MGI:4413688	tRNA gene	nuclear encoded tRNA alanine 15 (anticodon AGC)
5	gene	30.89730	30.89958	positive	MGI_C57BL6J_2441703	5930420M18Rik	ENSEMBL:ENSMUSG00000107201	MGI:2441703	unclassified gene	RIKEN cDNA 5930420M18 gene
5	gene	30.90589	30.90781	negative	MGI_C57BL6J_1914945	Ost4	NCBI_Gene:67695,ENSEMBL:ENSMUSG00000038803	MGI:1914945	protein coding gene	oligosaccharyltransferase complex subunit 4 (non-catalytic)
5	gene	30.91338	30.92128	positive	MGI_C57BL6J_1926189	Emilin1	NCBI_Gene:100952,ENSEMBL:ENSMUSG00000029163	MGI:1926189	protein coding gene	elastin microfibril interfacer 1
5	gene	30.92143	30.93125	positive	MGI_C57BL6J_1096353	Khk	NCBI_Gene:16548,ENSEMBL:ENSMUSG00000029162	MGI:1096353	protein coding gene	ketohexokinase
5	gene	30.93314	30.94559	negative	MGI_C57BL6J_1915817	Cgref1	NCBI_Gene:68567,ENSEMBL:ENSMUSG00000029161	MGI:1915817	protein coding gene	cell growth regulator with EF hand domain 1
5	pseudogene	30.95007	30.95510	positive	MGI_C57BL6J_1931013	Abhd1	NCBI_Gene:57742,ENSEMBL:ENSMUSG00000006638	MGI:1931013	polymorphic pseudogene	abhydrolase domain containing 1
5	gene	30.95085	30.96036	negative	MGI_C57BL6J_1355326	Preb	NCBI_Gene:50907,ENSEMBL:ENSMUSG00000045302	MGI:1355326	protein coding gene	prolactin regulatory element binding
5	gene	30.96860	30.98806	positive	MGI_C57BL6J_1934960	Tcf23	NCBI_Gene:69852,ENSEMBL:ENSMUSG00000006642	MGI:1934960	protein coding gene	transcription factor 23
5	gene	31.03604	31.04892	negative	MGI_C57BL6J_2660847	Slc5a6	NCBI_Gene:330064,ENSEMBL:ENSMUSG00000006641	MGI:2660847	protein coding gene	solute carrier family 5 (sodium-dependent vitamin transporter), member 6
5	gene	31.04831	31.05463	positive	MGI_C57BL6J_1918918	Atraid	NCBI_Gene:381629,ENSEMBL:ENSMUSG00000013622	MGI:1918918	protein coding gene	all-trans retinoic acid induced differentiation factor
5	gene	31.05470	31.07848	positive	MGI_C57BL6J_1916969	Cad	NCBI_Gene:69719,ENSEMBL:ENSMUSG00000013629	MGI:1916969	protein coding gene	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
5	gene	31.08043	31.08385	negative	MGI_C57BL6J_5621486	Gm38601	NCBI_Gene:102642244	MGI:5621486	lncRNA gene	predicted gene, 38601
5	gene	31.08611	31.10824	negative	MGI_C57BL6J_1345280	Slc30a3	NCBI_Gene:22784,ENSEMBL:ENSMUSG00000029151	MGI:1345280	protein coding gene	solute carrier family 30 (zinc transporter), member 3
5	gene	31.09498	31.09729	positive	MGI_C57BL6J_3642216	Gm9924	ENSEMBL:ENSMUSG00000104299	MGI:3642216	unclassified gene	predicted gene 9924
5	gene	31.10628	31.11253	positive	MGI_C57BL6J_3045263	Dnajc5g	NCBI_Gene:231098,ENSEMBL:ENSMUSG00000053856	MGI:3045263	protein coding gene	DnaJ heat shock protein family (Hsp40) member C5 gamma
5	gene	31.11661	31.13763	positive	MGI_C57BL6J_1889623	Trim54	NCBI_Gene:58522,ENSEMBL:ENSMUSG00000062077	MGI:1889623	protein coding gene	tripartite motif-containing 54
5	gene	31.11841	31.11942	negative	MGI_C57BL6J_5623158	Gm40273	NCBI_Gene:105244715	MGI:5623158	lncRNA gene	predicted gene, 40273
5	gene	31.13575	31.13734	negative	MGI_C57BL6J_3705154	Gm15469	ENSEMBL:ENSMUSG00000107265	MGI:3705154	lncRNA gene	predicted gene 15469
5	gene	31.13799	31.13890	negative	MGI_C57BL6J_1276123	Ucn	NCBI_Gene:22226,ENSEMBL:ENSMUSG00000038676	MGI:1276123	protein coding gene	urocortin
5	gene	31.14065	31.15425	negative	MGI_C57BL6J_97138	Mpv17	NCBI_Gene:17527,ENSEMBL:ENSMUSG00000107283	MGI:97138	protein coding gene	MpV17 mitochondrial inner membrane protein
5	gene	31.14474	31.17991	negative	MGI_C57BL6J_5580315	Gm29609	ENSEMBL:ENSMUSG00000101678	MGI:5580315	protein coding gene	predicted gene 29609
5	gene	31.15601	31.18014	negative	MGI_C57BL6J_1919002	Gtf3c2	NCBI_Gene:71752,ENSEMBL:ENSMUSG00000106864	MGI:1919002	protein coding gene	general transcription factor IIIC, polypeptide 2, beta
5	gene	31.18756	31.19343	negative	MGI_C57BL6J_95300	Eif2b4	NCBI_Gene:13667,ENSEMBL:ENSMUSG00000029145	MGI:95300	protein coding gene	eukaryotic translation initiation factor 2B, subunit 4 delta
5	gene	31.19323	31.19914	positive	MGI_C57BL6J_2387801	Snx17	NCBI_Gene:266781,ENSEMBL:ENSMUSG00000029146	MGI:2387801	protein coding gene	sorting nexin 17
5	gene	31.19898	31.20230	negative	MGI_C57BL6J_2141255	Zfp513	NCBI_Gene:101023,ENSEMBL:ENSMUSG00000043059	MGI:2141255	protein coding gene	zinc finger protein 513
5	gene	31.20178	31.20280	positive	MGI_C57BL6J_5826545	Gm46908	NCBI_Gene:108169037	MGI:5826545	lncRNA gene	predicted gene, 46908
5	gene	31.20266	31.22069	negative	MGI_C57BL6J_106065	Ppm1g	NCBI_Gene:14208,ENSEMBL:ENSMUSG00000029147	MGI:106065	protein coding gene	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
5	gene	31.21034	31.21431	negative	MGI_C57BL6J_5662935	Gm42798	ENSEMBL:ENSMUSG00000106717	MGI:5662935	unclassified gene	predicted gene 42798
5	gene	31.24046	31.24193	negative	MGI_C57BL6J_3642876	Gm9970	NCBI_Gene:621407,ENSEMBL:ENSMUSG00000055424	MGI:3642876	protein coding gene	predicted gene 9970
5	gene	31.24086	31.25157	positive	MGI_C57BL6J_2183436	Nrbp1	NCBI_Gene:192292,ENSEMBL:ENSMUSG00000029148	MGI:2183436	protein coding gene	nuclear receptor binding protein 1
5	gene	31.25067	31.25200	negative	MGI_C57BL6J_5826546	Gm46909	NCBI_Gene:108169038	MGI:5826546	lncRNA gene	predicted gene, 46909
5	gene	31.25169	31.25320	positive	MGI_C57BL6J_1917065	Krtcap3	NCBI_Gene:69815,ENSEMBL:ENSMUSG00000029149	MGI:1917065	protein coding gene	keratinocyte associated protein 3
5	gene	31.25328	31.29112	negative	MGI_C57BL6J_2682064	Ift172	NCBI_Gene:67661,ENSEMBL:ENSMUSG00000038564	MGI:2682064	protein coding gene	intraflagellar transport 172
5	gene	31.29224	31.29608	negative	MGI_C57BL6J_1917195	Fndc4	NCBI_Gene:64339,ENSEMBL:ENSMUSG00000038552	MGI:1917195	protein coding gene	fibronectin type III domain containing 4
5	gene	31.29724	31.32731	positive	MGI_C57BL6J_1096345	Gckr	NCBI_Gene:231103,ENSEMBL:ENSMUSG00000059434	MGI:1096345	protein coding gene	glucokinase regulatory protein
5	pseudogene	31.35631	31.35680	negative	MGI_C57BL6J_5011642	Gm19457	NCBI_Gene:100502926,ENSEMBL:ENSMUSG00000106935	MGI:5011642	pseudogene	predicted gene, 19457
5	gene	31.40255	31.40424	negative	MGI_C57BL6J_5623160	Gm40275	NCBI_Gene:105244717	MGI:5623160	protein coding gene	predicted gene, 40275
5	gene	31.40587	31.40831	negative	MGI_C57BL6J_5825581	Gm45944	NCBI_Gene:108167333	MGI:5825581	protein coding gene	predicted gene, 45944
5	gene	31.41219	31.41559	negative	MGI_C57BL6J_5595341	Gm36182	NCBI_Gene:102640003	MGI:5595341	lncRNA gene	predicted gene, 36182
5	pseudogene	31.45082	31.45145	positive	MGI_C57BL6J_5663796	Gm43659	ENSEMBL:ENSMUSG00000106866	MGI:5663796	pseudogene	predicted gene 43659
5	gene	31.45122	31.45233	negative	MGI_C57BL6J_1922156	4930478M09Rik	ENSEMBL:ENSMUSG00000106950	MGI:1922156	unclassified gene	RIKEN cDNA 4930478M09 gene
5	gene	31.45241	31.48175	positive	MGI_C57BL6J_1917345	Zfp512	NCBI_Gene:269639,ENSEMBL:ENSMUSG00000062761	MGI:1917345	protein coding gene	zinc finger protein 512
5	gene	31.46102	31.46241	positive	MGI_C57BL6J_5663196	Gm43059	ENSEMBL:ENSMUSG00000107120	MGI:5663196	unclassified gene	predicted gene 43059
5	gene	31.48574	31.48848	positive	MGI_C57BL6J_1914906	4930548H24Rik	NCBI_Gene:67656,ENSEMBL:ENSMUSG00000029138	MGI:1914906	protein coding gene	RIKEN cDNA 4930548H24 gene
5	gene	31.48663	31.49518	negative	MGI_C57BL6J_1923094	4930566F21Rik	ENSEMBL:ENSMUSG00000107142	MGI:1923094	lncRNA gene	RIKEN cDNA 4930566F21 gene
5	gene	31.49474	31.51290	positive	MGI_C57BL6J_1921504	Gpn1	NCBI_Gene:74254,ENSEMBL:ENSMUSG00000064037	MGI:1921504	protein coding gene	GPN-loop GTPase 1
5	gene	31.51456	31.52781	negative	MGI_C57BL6J_1919445	Supt7l	NCBI_Gene:72195,ENSEMBL:ENSMUSG00000053134	MGI:1919445	protein coding gene	SPT7-like, STAGA complex gamma subunit
5	gene	31.52685	31.55864	positive	MGI_C57BL6J_1196608	Slc4a1ap	NCBI_Gene:20534,ENSEMBL:ENSMUSG00000029141	MGI:1196608	protein coding gene	solute carrier family 4 (anion exchanger), member 1, adaptor protein
5	gene	31.56081	31.56907	negative	MGI_C57BL6J_5663797	Gm43660	ENSEMBL:ENSMUSG00000107352	MGI:5663797	lncRNA gene	predicted gene 43660
5	gene	31.56722	31.57309	positive	MGI_C57BL6J_1925803	E130118H10Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA E130118H10 gene
5	gene	31.56959	31.57140	negative	MGI_C57BL6J_2140975	AI839979	NCBI_Gene:100740,ENSEMBL:ENSMUSG00000107355	MGI:2140975	lncRNA gene	expressed sequence AI839979
5	gene	31.58108	31.58171	positive	MGI_C57BL6J_1920302	2900076G11Rik	ENSEMBL:ENSMUSG00000107015	MGI:1920302	unclassified gene	RIKEN cDNA 2900076G11 gene
5	gene	31.59575	31.66343	positive	MGI_C57BL6J_5621309	Gm38424	NCBI_Gene:100503002	MGI:5621309	lncRNA gene	predicted gene, 38424
5	gene	31.59693	31.66438	positive	MGI_C57BL6J_2137225	Mrpl33	NCBI_Gene:66845,ENSEMBL:ENSMUSG00000106918	MGI:2137225	protein coding gene	mitochondrial ribosomal protein L33
5	gene	31.59694	31.70197	positive	MGI_C57BL6J_5663946	Gm43809	ENSEMBL:ENSMUSG00000105617	MGI:5663946	lncRNA gene	predicted gene 43809
5	gene	31.62444	31.69770	negative	MGI_C57BL6J_1918586	Rbks	NCBI_Gene:71336,ENSEMBL:ENSMUSG00000029136	MGI:1918586	protein coding gene	ribokinase
5	gene	31.64500	31.64635	positive	MGI_C57BL6J_3780713	Gm2545	NA	NA	unclassified gene	predicted gene 2545
5	gene	31.66723	31.66734	negative	MGI_C57BL6J_5530804	Mir3473e	miRBase:MI0022357,NCBI_Gene:102466677,ENSEMBL:ENSMUSG00000099301	MGI:5530804	miRNA gene	microRNA 3473e
5	gene	31.69768	32.08496	positive	MGI_C57BL6J_1333875	Babam2	NCBI_Gene:107976,ENSEMBL:ENSMUSG00000052139	MGI:1333875	protein coding gene	BRISC and BRCA1 A complex member 2
5	gene	31.70840	31.70863	positive	MGI_C57BL6J_5663947	Gm43810	ENSEMBL:ENSMUSG00000107151	MGI:5663947	unclassified gene	predicted gene 43810
5	gene	31.87005	31.87035	positive	MGI_C57BL6J_5454213	Gm24436	ENSEMBL:ENSMUSG00000088514	MGI:5454213	unclassified non-coding RNA gene	predicted gene, 24436
5	gene	31.92670	31.92739	positive	MGI_C57BL6J_5663948	Gm43811	ENSEMBL:ENSMUSG00000107140	MGI:5663948	unclassified gene	predicted gene 43811
5	gene	31.95707	31.95795	positive	MGI_C57BL6J_1925673	9530049O05Rik	NA	NA	unclassified gene	RIKEN cDNA 9530049O05 gene
5	gene	32.00598	32.01086	negative	MGI_C57BL6J_4937957	Gm17130	ENSEMBL:ENSMUSG00000106894	MGI:4937957	lncRNA gene	predicted gene 17130
5	gene	32.09042	32.09913	positive	MGI_C57BL6J_5623162	Gm40277	NCBI_Gene:105244719	MGI:5623162	lncRNA gene	predicted gene, 40277
5	gene	32.11982	32.12339	positive	MGI_C57BL6J_5595824	Gm36665	NCBI_Gene:102640651	MGI:5595824	lncRNA gene	predicted gene, 36665
5	gene	32.13028	32.13317	negative	MGI_C57BL6J_3642170	Gm10463	ENSEMBL:ENSMUSG00000102759	MGI:3642170	unclassified gene	predicted gene 10463
5	gene	32.13580	32.15784	positive	MGI_C57BL6J_102858	Fosl2	NCBI_Gene:14284,ENSEMBL:ENSMUSG00000029135	MGI:102858	protein coding gene	fos-like antigen 2
5	gene	32.17510	32.17520	positive	MGI_C57BL6J_5456112	Gm26335	ENSEMBL:ENSMUSG00000096091	MGI:5456112	snRNA gene	predicted gene, 26335
5	gene	32.18220	32.18502	negative	MGI_C57BL6J_5595891	Gm36732	NCBI_Gene:102640735	MGI:5595891	lncRNA gene	predicted gene, 36732
5	pseudogene	32.18550	32.18651	positive	MGI_C57BL6J_3779965	Gm9555	NCBI_Gene:672217,ENSEMBL:ENSMUSG00000107220	MGI:3779965	pseudogene	predicted gene 9555
5	gene	32.22570	32.23258	negative	MGI_C57BL6J_5595942	Gm36783	NCBI_Gene:102640801	MGI:5595942	lncRNA gene	predicted gene, 36783
5	gene	32.23269	32.36652	positive	MGI_C57BL6J_1922406	Plb1	NCBI_Gene:665270,ENSEMBL:ENSMUSG00000029134	MGI:1922406	protein coding gene	phospholipase B1
5	pseudogene	32.31192	32.31212	negative	MGI_C57BL6J_3783060	Gm15615	ENSEMBL:ENSMUSG00000081200	MGI:3783060	pseudogene	predicted gene 15615
5	gene	32.31853	32.35488	negative	MGI_C57BL6J_5595999	Gm36840	NCBI_Gene:102640881,ENSEMBL:ENSMUSG00000107078	MGI:5595999	lncRNA gene	predicted gene, 36840
5	gene	32.39005	32.39791	negative	MGI_C57BL6J_3644314	Gm7596	ENSEMBL:ENSMUSG00000107036	MGI:3644314	lncRNA gene	predicted gene 7596
5	pseudogene	32.41993	32.42117	positive	MGI_C57BL6J_3648579	Gm5864	NCBI_Gene:545743,ENSEMBL:ENSMUSG00000107211	MGI:3648579	pseudogene	predicted gene 5864
5	gene	32.45884	32.51743	positive	MGI_C57BL6J_104871	Ppp1cb	NCBI_Gene:19046,ENSEMBL:ENSMUSG00000014956	MGI:104871	protein coding gene	protein phosphatase 1 catalytic subunit beta
5	gene	32.45983	32.46229	positive	MGI_C57BL6J_5663449	Gm43312	ENSEMBL:ENSMUSG00000107197	MGI:5663449	unclassified gene	predicted gene 43312
5	gene	32.46719	32.46943	positive	MGI_C57BL6J_5663450	Gm43313	ENSEMBL:ENSMUSG00000107083	MGI:5663450	unclassified gene	predicted gene 43313
5	gene	32.47081	32.47428	positive	MGI_C57BL6J_2442870	E230008O15Rik	NA	NA	unclassified gene	RIKEN cDNA E230008O15 gene
5	pseudogene	32.47956	32.47989	negative	MGI_C57BL6J_3783058	Gm15613	ENSEMBL:ENSMUSG00000080753	MGI:3783058	pseudogene	predicted gene 15613
5	gene	32.50718	32.65107	negative	MGI_C57BL6J_3783059	Gm15614	NCBI_Gene:102640951,ENSEMBL:ENSMUSG00000085234	MGI:3783059	lncRNA gene	predicted gene 15614
5	pseudogene	32.54794	32.54832	negative	MGI_C57BL6J_5663101	Gm42964	ENSEMBL:ENSMUSG00000107316	MGI:5663101	pseudogene	predicted gene 42964
5	pseudogene	32.55066	32.55746	positive	MGI_C57BL6J_5663949	Gm43812	ENSEMBL:ENSMUSG00000106835	MGI:5663949	pseudogene	predicted gene 43812
5	gene	32.60702	32.61180	negative	MGI_C57BL6J_3642164	Gm10461	ENSEMBL:ENSMUSG00000107277	MGI:3642164	unclassified gene	predicted gene 10461
5	gene	32.61117	32.68707	positive	MGI_C57BL6J_99147	Yes1	NCBI_Gene:22612,ENSEMBL:ENSMUSG00000014932	MGI:99147	protein coding gene	YES proto-oncogene 1, Src family tyrosine kinase
5	gene	32.62984	32.63096	positive	MGI_C57BL6J_5663831	Gm43694	ENSEMBL:ENSMUSG00000107018	MGI:5663831	unclassified gene	predicted gene 43694
5	pseudogene	32.69575	32.71302	positive	MGI_C57BL6J_6324755	Gm50482	ENSEMBL:ENSMUSG00000118435	MGI:6324755	pseudogene	predicted gene, 50482
5	gene	32.71307	32.71399	negative	MGI_C57BL6J_5622448	Gm39563	NA	NA	lncRNA gene	predicted gene%2c 39563
5	gene	32.71307	32.71399	negative	MGI_C57BL6J_5663989	Gm43852	ENSEMBL:ENSMUSG00000106680	MGI:5663989	unclassified gene	predicted gene 43852
5	pseudogene	32.72033	32.73640	positive	MGI_C57BL6J_3780587	Gm2420	NCBI_Gene:100039775,ENSEMBL:ENSMUSG00000082305	MGI:3780587	pseudogene	predicted gene 2420
5	gene	32.73630	32.78565	negative	MGI_C57BL6J_2445114	Pisd	NCBI_Gene:320951,ENSEMBL:ENSMUSG00000023452	MGI:2445114	protein coding gene	phosphatidylserine decarboxylase
5	gene	32.73723	32.82711	negative	MGI_C57BL6J_5313118	Gm20671	ENSEMBL:ENSMUSG00000093574	MGI:5313118	protein coding gene	predicted gene 20671
5	gene	32.73906	32.73933	negative	MGI_C57BL6J_5663832	Gm43695	ENSEMBL:ENSMUSG00000105647	MGI:5663832	lncRNA gene	predicted gene 43695
5	gene	32.78921	32.85434	negative	MGI_C57BL6J_2443658	Prr14l	NCBI_Gene:215476,ENSEMBL:ENSMUSG00000054280	MGI:2443658	protein coding gene	proline rich 14-like
5	gene	32.79990	32.80096	negative	MGI_C57BL6J_5663829	Gm43692	ENSEMBL:ENSMUSG00000105429	MGI:5663829	unclassified gene	predicted gene 43692
5	pseudogene	32.83810	32.83846	positive	MGI_C57BL6J_3780791	Gm2623	NCBI_Gene:100040141,ENSEMBL:ENSMUSG00000106654	MGI:3780791	pseudogene	predicted gene 2623
5	gene	32.86364	32.99424	positive	MGI_C57BL6J_2141101	Depdc5	NCBI_Gene:277854,ENSEMBL:ENSMUSG00000037426	MGI:2141101	protein coding gene	DEP domain containing 5
5	gene	32.91363	32.91373	positive	MGI_C57BL6J_5453780	Gm24003	ENSEMBL:ENSMUSG00000089080	MGI:5453780	snRNA gene	predicted gene, 24003
5	gene	32.98457	32.98582	positive	MGI_C57BL6J_5663830	Gm43693	ENSEMBL:ENSMUSG00000105929	MGI:5663830	unclassified gene	predicted gene 43693
5	gene	33.01882	33.02797	positive	MGI_C57BL6J_109194	Ywhah	NCBI_Gene:22629,ENSEMBL:ENSMUSG00000018965	MGI:109194	protein coding gene	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
5	gene	33.03118	33.04002	positive	MGI_C57BL6J_5589051	Gm29892	NCBI_Gene:102631595	MGI:5589051	lncRNA gene	predicted gene, 29892
5	gene	33.04044	33.04333	positive	MGI_C57BL6J_5623163	Gm40278	NCBI_Gene:105244720	MGI:5623163	lncRNA gene	predicted gene, 40278
5	pseudogene	33.04998	33.05020	positive	MGI_C57BL6J_5663986	Gm43849	ENSEMBL:ENSMUSG00000107046	MGI:5663986	pseudogene	predicted gene 43849
5	pseudogene	33.07598	33.07641	positive	MGI_C57BL6J_3704247	Rpl35a-ps5	NCBI_Gene:100040169,ENSEMBL:ENSMUSG00000093885	MGI:3704247	pseudogene	ribosomal protein L35A, pseudogene 5
5	gene	33.10422	33.16287	positive	MGI_C57BL6J_107678	Slc5a1	NCBI_Gene:20537,ENSEMBL:ENSMUSG00000011034	MGI:107678	protein coding gene	solute carrier family 5 (sodium/glucose cotransporter), member 1
5	pseudogene	33.12680	33.12726	positive	MGI_C57BL6J_3802030	Gm15936	ENSEMBL:ENSMUSG00000081022	MGI:3802030	pseudogene	predicted gene 15936
5	pseudogene	33.14095	33.14242	negative	MGI_C57BL6J_1923233	5033423K11Rik	ENSEMBL:ENSMUSG00000081618	MGI:1923233	pseudogene	RIKEN cDNA 5033423K11 gene
5	gene	33.19818	33.21845	negative	MGI_C57BL6J_1923724	Spon2	NCBI_Gene:100689,ENSEMBL:ENSMUSG00000037379	MGI:1923724	protein coding gene	spondin 2, extracellular matrix protein
5	gene	33.24772	33.27500	negative	MGI_C57BL6J_1201685	Ctbp1	NCBI_Gene:13016,ENSEMBL:ENSMUSG00000037373	MGI:1201685	protein coding gene	C-terminal binding protein 1
5	pseudogene	33.25532	33.25636	positive	MGI_C57BL6J_5663987	Gm43850	ENSEMBL:ENSMUSG00000107161	MGI:5663987	pseudogene	predicted gene 43850
5	gene	33.29361	33.31115	negative	MGI_C57BL6J_5141930	Gm20465	NCBI_Gene:102632070,ENSEMBL:ENSMUSG00000092275	MGI:5141930	lncRNA gene	predicted gene 20465
5	gene	33.33551	33.37330	positive	MGI_C57BL6J_1891748	Maea	NCBI_Gene:59003,ENSEMBL:ENSMUSG00000079562	MGI:1891748	protein coding gene	macrophage erythroblast attacher
5	gene	33.37852	33.41975	positive	MGI_C57BL6J_1918351	Uvssa	NCBI_Gene:71101,ENSEMBL:ENSMUSG00000037355	MGI:1918351	protein coding gene	UV stimulated scaffold protein A
5	gene	33.43073	33.43409	negative	MGI_C57BL6J_109346	Nkx1-1	NCBI_Gene:672284,ENSEMBL:ENSMUSG00000029112	MGI:109346	protein coding gene	NK1 homeobox 1
5	gene	33.43662	33.43746	negative	MGI_C57BL6J_5663988	Gm43851	ENSEMBL:ENSMUSG00000107248	MGI:5663988	lncRNA gene	predicted gene 43851
5	gene	33.60035	33.62964	negative	MGI_C57BL6J_1919225	Fam53a	NCBI_Gene:74504,ENSEMBL:ENSMUSG00000037339	MGI:1919225	protein coding gene	family with sequence similarity 53, member A
5	gene	33.62978	33.63209	positive	MGI_C57BL6J_3646113	Gm9903	NCBI_Gene:433873,ENSEMBL:ENSMUSG00000097271	MGI:3646113	protein coding gene	predicted gene 9903
5	gene	33.63227	33.63304	positive	MGI_C57BL6J_5623164	Gm40279	NCBI_Gene:105244721	MGI:5623164	lncRNA gene	predicted gene, 40279
5	gene	33.63495	33.65257	negative	MGI_C57BL6J_108402	Slbp	NCBI_Gene:20492,ENSEMBL:ENSMUSG00000004642	MGI:108402	protein coding gene	stem-loop binding protein
5	gene	33.65210	33.65326	positive	MGI_C57BL6J_3642067	Gm10459	ENSEMBL:ENSMUSG00000106834	MGI:3642067	unclassified gene	predicted gene 10459
5	gene	33.65322	33.65842	negative	MGI_C57BL6J_1915616	Tmem129	NCBI_Gene:68366,ENSEMBL:ENSMUSG00000019295	MGI:1915616	protein coding gene	transmembrane protein 129
5	gene	33.65813	33.67900	positive	MGI_C57BL6J_1341163	Tacc3	NCBI_Gene:21335,ENSEMBL:ENSMUSG00000037313	MGI:1341163	protein coding gene	transforming, acidic coiled-coil containing protein 3
5	pseudogene	33.68272	33.68297	negative	MGI_C57BL6J_5663102	Gm42965	ENSEMBL:ENSMUSG00000106971	MGI:5663102	pseudogene	predicted gene 42965
5	gene	33.72004	33.72367	negative	MGI_C57BL6J_3704248	G630022F23Rik	ENSEMBL:ENSMUSG00000106896	MGI:3704248	unclassified gene	RIKEN cDNA G630022F23 gene
5	gene	33.72167	33.73707	positive	MGI_C57BL6J_95524	Fgfr3	NCBI_Gene:14184,ENSEMBL:ENSMUSG00000054252	MGI:95524	protein coding gene	fibroblast growth factor receptor 3
5	gene	33.73967	33.78282	negative	MGI_C57BL6J_1932557	Letm1	NCBI_Gene:56384,ENSEMBL:ENSMUSG00000005299	MGI:1932557	protein coding gene	leucine zipper-EF-hand containing transmembrane protein 1
5	pseudogene	33.75934	33.75964	positive	MGI_C57BL6J_3642158	Gm10059	NCBI_Gene:100503585,ENSEMBL:ENSMUSG00000059064	MGI:3642158	pseudogene	predicted pseudogene 10059
5	pseudogene	33.77426	33.77588	positive	MGI_C57BL6J_5589867	Gm30708	NCBI_Gene:102632710,ENSEMBL:ENSMUSG00000107149	MGI:5589867	pseudogene	predicted gene, 30708
5	gene	33.82073	33.89798	positive	MGI_C57BL6J_1276574	Nsd2	NCBI_Gene:107823,ENSEMBL:ENSMUSG00000057406	MGI:1276574	protein coding gene	nuclear receptor binding SET domain protein 2
5	gene	33.89792	33.93641	negative	MGI_C57BL6J_1346098	Nelfa	NCBI_Gene:24116,ENSEMBL:ENSMUSG00000029111	MGI:1346098	protein coding gene	negative elongation factor complex member A, Whsc2
5	gene	33.89891	33.89897	negative	MGI_C57BL6J_5530941	Mir7024	miRBase:MI0022873,NCBI_Gene:102466789,ENSEMBL:ENSMUSG00000098830	MGI:5530941	miRNA gene	microRNA 7024
5	gene	33.94703	33.94883	positive	MGI_C57BL6J_5662986	Gm42849	ENSEMBL:ENSMUSG00000107043	MGI:5662986	lncRNA gene	predicted gene 42849
5	gene	33.94758	33.94899	negative	MGI_C57BL6J_5662988	Gm42851	ENSEMBL:ENSMUSG00000106688	MGI:5662988	lncRNA gene	predicted gene 42851
5	gene	33.98210	33.98315	negative	MGI_C57BL6J_5589961	Gm30802	NCBI_Gene:102632833	MGI:5589961	lncRNA gene	predicted gene, 30802
5	gene	33.98343	33.98501	positive	MGI_C57BL6J_2686519	Gm1673	NCBI_Gene:381633,ENSEMBL:ENSMUSG00000070858	MGI:2686519	protein coding gene	predicted gene 1673
5	gene	33.99051	33.99306	negative	MGI_C57BL6J_5662984	Gm42847	ENSEMBL:ENSMUSG00000106743	MGI:5662984	unclassified gene	predicted gene 42847
5	gene	33.99598	34.00592	positive	MGI_C57BL6J_2447776	Nat8l	NCBI_Gene:269642,ENSEMBL:ENSMUSG00000048142	MGI:2447776	protein coding gene	N-acetyltransferase 8-like
5	gene	34.00718	34.16953	negative	MGI_C57BL6J_2675617	Poln	NCBI_Gene:272158,ENSEMBL:ENSMUSG00000045102	MGI:2675617	protein coding gene	DNA polymerase N
5	pseudogene	34.06076	34.06122	negative	MGI_C57BL6J_5011983	Gm19798	ENSEMBL:ENSMUSG00000106868	MGI:5011983	pseudogene	predicted gene, 19798
5	pseudogene	34.09670	34.09703	positive	MGI_C57BL6J_5663596	Gm43459	ENSEMBL:ENSMUSG00000106771	MGI:5663596	pseudogene	predicted gene 43459
5	gene	34.11874	34.13534	positive	MGI_C57BL6J_1922607	4930557J02Rik	NCBI_Gene:75357,ENSEMBL:ENSMUSG00000106902	MGI:1922607	lncRNA gene	RIKEN cDNA 4930557J02 gene
5	gene	34.15388	34.16953	negative	MGI_C57BL6J_2387633	Haus3	NCBI_Gene:231123,ENSEMBL:ENSMUSG00000079555	MGI:2387633	protein coding gene	HAUS augmin-like complex, subunit 3
5	gene	34.16232	34.16243	positive	MGI_C57BL6J_5455695	Gm25918	ENSEMBL:ENSMUSG00000077454	MGI:5455695	snRNA gene	predicted gene, 25918
5	gene	34.17388	34.18772	negative	MGI_C57BL6J_104991	Mxd4	NCBI_Gene:17122,ENSEMBL:ENSMUSG00000037235	MGI:104991	protein coding gene	Max dimerization protein 4
5	gene	34.17389	34.17489	positive	MGI_C57BL6J_5662983	Gm42846	ENSEMBL:ENSMUSG00000106702	MGI:5662983	lncRNA gene	predicted gene 42846
5	gene	34.19489	34.28847	negative	MGI_C57BL6J_2684992	Zfyve28	NCBI_Gene:231125,ENSEMBL:ENSMUSG00000037224	MGI:2684992	protein coding gene	zinc finger, FYVE domain containing 28
5	gene	34.21181	34.21380	negative	MGI_C57BL6J_3782961	Gm15513	ENSEMBL:ENSMUSG00000086291	MGI:3782961	lncRNA gene	predicted gene 15513
5	gene	34.22116	34.22598	positive	MGI_C57BL6J_5662985	Gm42848	ENSEMBL:ENSMUSG00000106888	MGI:5662985	lncRNA gene	predicted gene 42848
5	gene	34.28695	34.32886	positive	MGI_C57BL6J_5434801	Cfap99	NCBI_Gene:100862066,ENSEMBL:ENSMUSG00000109572	MGI:5434801	protein coding gene	cilia and flagella associated protein 99
5	pseudogene	34.30634	34.30787	negative	MGI_C57BL6J_3646114	Gm5553	NCBI_Gene:433874	MGI:3646114	pseudogene	predicted gene 5553
5	pseudogene	34.30672	34.30718	negative	MGI_C57BL6J_5663242	Gm43105	ENSEMBL:ENSMUSG00000107006	MGI:5663242	pseudogene	predicted gene 43105
5	gene	34.30921	34.32753	negative	MGI_C57BL6J_5663595	Gm43458	ENSEMBL:ENSMUSG00000107287	MGI:5663595	lncRNA gene	predicted gene 43458
5	gene	34.33512	34.33718	negative	MGI_C57BL6J_2442971	A830049F12Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA A830049F12 gene
5	gene	34.33625	34.35563	positive	MGI_C57BL6J_1201691	Rnf4	NCBI_Gene:19822,ENSEMBL:ENSMUSG00000029110	MGI:1201691	protein coding gene	ring finger protein 4
5	gene	34.36993	34.48646	positive	MGI_C57BL6J_2447768	Fam193a	NCBI_Gene:231128,ENSEMBL:ENSMUSG00000037210	MGI:2447768	protein coding gene	family with sequence homology 193, member A
5	gene	34.46966	34.47319	positive	MGI_C57BL6J_5662696	Gm42559	ENSEMBL:ENSMUSG00000107227	MGI:5662696	unclassified gene	predicted gene 42559
5	pseudogene	34.48191	34.48252	negative	MGI_C57BL6J_5504046	Gm26931	ENSEMBL:ENSMUSG00000098062	MGI:5504046	pseudogene	predicted gene, 26931
5	gene	34.48731	34.48972	positive	MGI_C57BL6J_5663594	Gm43457	ENSEMBL:ENSMUSG00000106678	MGI:5663594	unclassified gene	predicted gene 43457
5	gene	34.49609	34.51399	negative	MGI_C57BL6J_2386643	Tnip2	NCBI_Gene:231130,ENSEMBL:ENSMUSG00000059866	MGI:2386643	protein coding gene	TNFAIP3 interacting protein 2
5	gene	34.52578	34.56364	positive	MGI_C57BL6J_1346349	Sh3bp2	NCBI_Gene:24055,ENSEMBL:ENSMUSG00000054520	MGI:1346349	protein coding gene	SH3-domain binding protein 2
5	gene	34.53065	34.53075	positive	MGI_C57BL6J_5452624	Gm22847	ENSEMBL:ENSMUSG00000088332	MGI:5452624	snRNA gene	predicted gene, 22847
5	gene	34.57366	34.63231	positive	MGI_C57BL6J_87918	Add1	NCBI_Gene:11518,ENSEMBL:ENSMUSG00000029106	MGI:87918	protein coding gene	adducin 1 (alpha)
5	gene	34.57415	34.57421	positive	MGI_C57BL6J_5531007	Mir7036b	miRBase:MI0024991,NCBI_Gene:102466999,ENSEMBL:ENSMUSG00000099082	MGI:5531007	miRNA gene	microRNA 7036b
5	gene	34.57509	34.57556	positive	MGI_C57BL6J_5663004	Gm42867	ENSEMBL:ENSMUSG00000107128	MGI:5663004	unclassified gene	predicted gene 42867
5	gene	34.63364	34.63721	negative	MGI_C57BL6J_1915544	Mfsd10	NCBI_Gene:68294,ENSEMBL:ENSMUSG00000001082	MGI:1915544	protein coding gene	major facilitator superfamily domain containing 10
5	gene	34.63854	34.66015	negative	MGI_C57BL6J_1922666	Nop14	NCBI_Gene:75416,ENSEMBL:ENSMUSG00000036693	MGI:1922666	protein coding gene	NOP14 nucleolar protein
5	gene	34.65063	34.65248	positive	MGI_C57BL6J_3782969	Gm15522	NCBI_Gene:108169039,ENSEMBL:ENSMUSG00000085166	MGI:3782969	lncRNA gene	predicted gene 15522
5	gene	34.66038	34.75530	positive	MGI_C57BL6J_95801	Grk4	NCBI_Gene:14772,ENSEMBL:ENSMUSG00000052783	MGI:95801	protein coding gene	G protein-coupled receptor kinase 4
5	gene	34.67952	34.70683	negative	MGI_C57BL6J_5662697	Gm42560	ENSEMBL:ENSMUSG00000107246	MGI:5662697	lncRNA gene	predicted gene 42560
5	gene	34.73285	34.73297	negative	MGI_C57BL6J_3783380	Mir467g	miRBase:MI0006301,NCBI_Gene:100316674,ENSEMBL:ENSMUSG00000080556	MGI:3783380	miRNA gene	microRNA 467g
5	gene	34.76174	34.91253	positive	MGI_C57BL6J_96067	Htt	NCBI_Gene:15194,ENSEMBL:ENSMUSG00000029104	MGI:96067	protein coding gene	huntingtin
5	gene	34.76935	34.76942	negative	MGI_C57BL6J_1923450	6430501K19Rik	NA	NA	unclassified gene	RIKEN cDNA 6430501K19 gene
5	gene	34.90801	34.92699	positive	MGI_C57BL6J_2684990	Msantd1	NCBI_Gene:403174,ENSEMBL:ENSMUSG00000051246	MGI:2684990	protein coding gene	Myb/SANT-like DNA-binding domain containing 1
5	gene	34.94939	35.03964	positive	MGI_C57BL6J_1918979	Rgs12	NCBI_Gene:71729,ENSEMBL:ENSMUSG00000029101	MGI:1918979	protein coding gene	regulator of G-protein signaling 12
5	gene	35.02105	35.02112	positive	MGI_C57BL6J_4834312	Mir3097	miRBase:MI0014090,NCBI_Gene:100526557,ENSEMBL:ENSMUSG00000093097	MGI:4834312	miRNA gene	microRNA 3097
5	gene	35.03187	35.03345	negative	MGI_C57BL6J_5663928	Gm43791	ENSEMBL:ENSMUSG00000107040	MGI:5663928	lncRNA gene	predicted gene 43791
5	gene	35.04151	35.04846	positive	MGI_C57BL6J_1859281	Hgfac	NCBI_Gene:54426,ENSEMBL:ENSMUSG00000029102	MGI:1859281	protein coding gene	hepatocyte growth factor activator
5	gene	35.05656	35.08784	positive	MGI_C57BL6J_3584043	Dok7	NCBI_Gene:231134,ENSEMBL:ENSMUSG00000044716	MGI:3584043	protein coding gene	docking protein 7
5	gene	35.09150	35.10577	negative	MGI_C57BL6J_96829	Lrpap1	NCBI_Gene:16976,ENSEMBL:ENSMUSG00000029103	MGI:96829	protein coding gene	low density lipoprotein receptor-related protein associated protein 1
5	gene	35.15990	35.16134	negative	MGI_C57BL6J_5590760	Gm31601	NCBI_Gene:102633879	MGI:5590760	lncRNA gene	predicted gene, 31601
5	gene	35.22967	35.26623	positive	MGI_C57BL6J_5623166	Gm40281	NCBI_Gene:105244723	MGI:5623166	lncRNA gene	predicted gene, 40281
5	gene	35.27832	35.28176	positive	MGI_C57BL6J_87936	Adra2c	NCBI_Gene:11553,ENSEMBL:ENSMUSG00000045318	MGI:87936	protein coding gene	adrenergic receptor, alpha 2c
5	gene	35.31397	35.34177	positive	MGI_C57BL6J_5590815	Gm31656	NCBI_Gene:102633959	MGI:5590815	lncRNA gene	predicted gene, 31656
5	gene	35.36154	35.36768	positive	MGI_C57BL6J_1922154	4930478P22Rik	NCBI_Gene:74429,ENSEMBL:ENSMUSG00000106762	MGI:1922154	lncRNA gene	RIKEN cDNA 4930478P22 gene
5	gene	35.37915	35.38848	negative	MGI_C57BL6J_3045238	E130018O15Rik	NCBI_Gene:442795,ENSEMBL:ENSMUSG00000055944	MGI:3045238	lncRNA gene	RIKEN cDNA E130018O15 gene
5	gene	35.38849	35.40046	positive	MGI_C57BL6J_107178	Hmx1	NCBI_Gene:15371,ENSEMBL:ENSMUSG00000067438	MGI:107178	protein coding gene	H6 homeobox 1
5	gene	35.39067	35.39191	negative	MGI_C57BL6J_2447822	4930442P19Rik	ENSEMBL:ENSMUSG00000103608	MGI:2447822	unclassified gene	RIKEN cDNA 4930442P19 gene
5	gene	35.39610	35.39655	positive	MGI_C57BL6J_5663514	Gm43377	ENSEMBL:ENSMUSG00000106970	MGI:5663514	unclassified gene	predicted gene 43377
5	gene	35.39682	35.40002	negative	MGI_C57BL6J_1925215	A930033C23Rik	NA	NA	unclassified gene	RIKEN cDNA A930033C23 gene
5	gene	35.41335	35.42369	positive	MGI_C57BL6J_5623168	Gm40283	NCBI_Gene:105244725	MGI:5623168	lncRNA gene	predicted gene, 40283
5	gene	35.50222	35.52570	negative	MGI_C57BL6J_88487	Cpz	NCBI_Gene:242939,ENSEMBL:ENSMUSG00000036596	MGI:88487	protein coding gene	carboxypeptidase Z
5	gene	35.55126	35.55396	negative	MGI_C57BL6J_5663997	Gm43860	ENSEMBL:ENSMUSG00000106928	MGI:5663997	unclassified gene	predicted gene 43860
5	pseudogene	35.55414	35.55625	positive	MGI_C57BL6J_103247	Plk-ps1	NCBI_Gene:18818,ENSEMBL:ENSMUSG00000083907	MGI:103247	pseudogene	polo like kinase, pseudogene 1
5	gene	35.55620	35.57507	negative	MGI_C57BL6J_1926140	Trmt44	NCBI_Gene:78890,ENSEMBL:ENSMUSG00000029097	MGI:1926140	protein coding gene	tRNA methyltransferase 44
5	gene	35.58123	35.58876	negative	MGI_C57BL6J_1921614	4931431C16Rik	NCBI_Gene:74364,ENSEMBL:ENSMUSG00000055061	MGI:1921614	lncRNA gene	RIKEN cDNA 4931431C16 gene
5	gene	35.58296	35.61535	positive	MGI_C57BL6J_1933156	Acox3	NCBI_Gene:80911,ENSEMBL:ENSMUSG00000029098	MGI:1933156	protein coding gene	acyl-Coenzyme A oxidase 3, pristanoyl
5	gene	35.65202	35.67981	negative	MGI_C57BL6J_1925808	Htra3	NCBI_Gene:78558,ENSEMBL:ENSMUSG00000029096	MGI:1925808	protein coding gene	HtrA serine peptidase 3
5	gene	35.69718	35.74008	negative	MGI_C57BL6J_2678949	Sh3tc1	NCBI_Gene:231147,ENSEMBL:ENSMUSG00000036553	MGI:2678949	protein coding gene	SH3 domain and tetratricopeptide repeats 1
5	gene	35.71911	35.72232	positive	MGI_C57BL6J_5591047	Gm31888	NCBI_Gene:102634261	MGI:5591047	lncRNA gene	predicted gene, 31888
5	gene	35.72255	35.72449	positive	MGI_C57BL6J_3783094	Gm15650	ENSEMBL:ENSMUSG00000087703	MGI:3783094	lncRNA gene	predicted gene 15650
5	gene	35.75785	35.88498	positive	MGI_C57BL6J_2385758	Ablim2	NCBI_Gene:231148,ENSEMBL:ENSMUSG00000029095	MGI:2385758	protein coding gene	actin-binding LIM protein 2
5	gene	35.89332	36.00392	positive	MGI_C57BL6J_1917542	Afap1	NCBI_Gene:70292,ENSEMBL:ENSMUSG00000029094	MGI:1917542	protein coding gene	actin filament associated protein 1
5	pseudogene	35.91790	35.91820	positive	MGI_C57BL6J_3783096	H2af-ps	NCBI_Gene:100040209,ENSEMBL:ENSMUSG00000082692	MGI:3783096	pseudogene	H2A histone family, pseudogene
5	gene	36.01718	36.39816	negative	MGI_C57BL6J_1932289	Sorcs2	NCBI_Gene:81840,ENSEMBL:ENSMUSG00000029093	MGI:1932289	protein coding gene	sortilin-related VPS10 domain containing receptor 2
5	gene	36.16492	36.16599	positive	MGI_C57BL6J_5591342	Gm32183	NCBI_Gene:102634649	MGI:5591342	lncRNA gene	predicted gene, 32183
5	gene	36.17856	36.17928	negative	MGI_C57BL6J_5591278	Gm32119	NCBI_Gene:102634572	MGI:5591278	lncRNA gene	predicted gene, 32119
5	gene	36.17945	36.18957	positive	MGI_C57BL6J_5591104	Gm31945	NCBI_Gene:102634339	MGI:5591104	lncRNA gene	predicted gene, 31945
5	gene	36.20402	36.20657	positive	MGI_C57BL6J_1924193	Psapl1	NCBI_Gene:76943,ENSEMBL:ENSMUSG00000043430	MGI:1924193	protein coding gene	prosaposin-like 1
5	gene	36.30157	36.30163	positive	MGI_C57BL6J_5530816	Mir7689	miRBase:MI0025042,NCBI_Gene:102465792,ENSEMBL:ENSMUSG00000098884	MGI:5530816	miRNA gene	microRNA 7689
5	gene	36.44761	36.46485	negative	MGI_C57BL6J_1923960	2210406O10Rik	NCBI_Gene:76710,ENSEMBL:ENSMUSG00000039563	MGI:1923960	lncRNA gene	RIKEN cDNA 2210406O10 gene
5	gene	36.46500	36.47408	positive	MGI_C57BL6J_1334417	Grpel1	NCBI_Gene:17713,ENSEMBL:ENSMUSG00000029198	MGI:1334417	protein coding gene	GrpE-like 1, mitochondrial
5	gene	36.47367	36.48428	negative	MGI_C57BL6J_3035274	Tada2b	NCBI_Gene:231151,ENSEMBL:ENSMUSG00000029196	MGI:3035274	protein coding gene	transcriptional adaptor 2B
5	gene	36.48459	36.48817	positive	MGI_C57BL6J_1913967	Ccdc96	NCBI_Gene:66717,ENSEMBL:ENSMUSG00000050677	MGI:1913967	protein coding gene	coiled-coil domain containing 96
5	gene	36.49060	36.59328	negative	MGI_C57BL6J_1098708	Tbc1d14	NCBI_Gene:100855,ENSEMBL:ENSMUSG00000029192	MGI:1098708	protein coding gene	TBC1 domain family, member 14
5	gene	36.50851	36.51245	negative	MGI_C57BL6J_5591687	Gm32528	NCBI_Gene:102635108	MGI:5591687	lncRNA gene	predicted gene, 32528
5	gene	36.58479	36.61374	negative	MGI_C57BL6J_5663073	Gm42936	ENSEMBL:ENSMUSG00000106797	MGI:5663073	lncRNA gene	predicted gene 42936
5	gene	36.60048	36.69673	negative	MGI_C57BL6J_1261849	D5Ertd579e	NCBI_Gene:320661,ENSEMBL:ENSMUSG00000029190	MGI:1261849	protein coding gene	DNA segment, Chr 5, ERATO Doi 579, expressed
5	gene	36.61870	36.62125	positive	MGI_C57BL6J_5662644	Gm42507	ENSEMBL:ENSMUSG00000107168	MGI:5662644	unclassified gene	predicted gene 42507
5	gene	36.63016	36.66166	negative	MGI_C57BL6J_5591743	Gm32584	NCBI_Gene:102635181	MGI:5591743	protein coding gene	predicted gene, 32584
5	gene	36.66641	36.66651	negative	MGI_C57BL6J_5454655	Gm24878	ENSEMBL:ENSMUSG00000089407	MGI:5454655	snRNA gene	predicted gene, 24878
5	gene	36.67166	36.67178	positive	MGI_C57BL6J_5455544	Gm25767	ENSEMBL:ENSMUSG00000089197	MGI:5455544	snoRNA gene	predicted gene, 25767
5	gene	36.69823	36.71621	negative	MGI_C57BL6J_5591884	Gm32725	NCBI_Gene:102635368	MGI:5591884	lncRNA gene	predicted gene, 32725
5	gene	36.71875	36.72371	positive	MGI_C57BL6J_5592176	Gm33017	NCBI_Gene:102635763	MGI:5592176	lncRNA gene	predicted gene, 33017
5	gene	36.73006	36.73220	positive	MGI_C57BL6J_5592273	Gm33114	NCBI_Gene:102635894	MGI:5592273	lncRNA gene	predicted gene, 33114
5	gene	36.74737	36.74868	negative	MGI_C57BL6J_1929230	Bloc1s4	NCBI_Gene:117197,ENSEMBL:ENSMUSG00000060708	MGI:1929230	protein coding gene	biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
5	gene	36.74862	36.75044	positive	MGI_C57BL6J_5663838	Gm43701	ENSEMBL:ENSMUSG00000107081	MGI:5663838	lncRNA gene	predicted gene 43701
5	gene	36.76250	36.76742	negative	MGI_C57BL6J_5623203	Gm40318	NCBI_Gene:105244766,ENSEMBL:ENSMUSG00000115557	MGI:5623203	protein coding gene	predicted gene, 40318
5	gene	36.79487	36.79677	negative	MGI_C57BL6J_1914818	Mrfap1	NCBI_Gene:67568,ENSEMBL:ENSMUSG00000055302	MGI:1914818	protein coding gene	Morf4 family associated protein 1
5	gene	36.80681	36.83065	negative	MGI_C57BL6J_1195262	Man2b2	NCBI_Gene:17160,ENSEMBL:ENSMUSG00000029119	MGI:1195262	protein coding gene	mannosidase 2, alpha B2
5	gene	36.86684	36.95508	positive	MGI_C57BL6J_2442660	Ppp2r2c	NCBI_Gene:269643,ENSEMBL:ENSMUSG00000029120	MGI:2442660	protein coding gene	protein phosphatase 2, regulatory subunit B, gamma
5	gene	36.87360	36.87688	negative	MGI_C57BL6J_1918304	Ppp2r2cos	NCBI_Gene:71054,ENSEMBL:ENSMUSG00000087487	MGI:1918304	antisense lncRNA gene	protein phosphatase 2, regulatory subunit B, gamma, opposite strand
5	gene	36.91011	36.91026	positive	MGI_C57BL6J_5662643	Gm42506	ENSEMBL:ENSMUSG00000106934	MGI:5662643	unclassified gene	predicted gene 42506
5	gene	36.96610	36.98920	negative	MGI_C57BL6J_1328355	Wfs1	NCBI_Gene:22393,ENSEMBL:ENSMUSG00000039474	MGI:1328355	protein coding gene	wolframin ER transmembrane glycoprotein
5	gene	37.02695	37.15061	positive	MGI_C57BL6J_1923321	Jakmip1	NCBI_Gene:76071,ENSEMBL:ENSMUSG00000063646	MGI:1923321	protein coding gene	janus kinase and microtubule interacting protein 1
5	gene	37.03816	37.04165	negative	MGI_C57BL6J_5477141	Gm26647	ENSEMBL:ENSMUSG00000097686	MGI:5477141	lncRNA gene	predicted gene, 26647
5	pseudogene	37.05742	37.05849	negative	MGI_C57BL6J_5434397	Gm21042	NCBI_Gene:100534361	MGI:5434397	pseudogene	predicted gene, 21042
5	gene	37.08537	37.23448	positive	MGI_C57BL6J_2685889	Gm1043	NCBI_Gene:381634,ENSEMBL:ENSMUSG00000117286	MGI:2685889	protein coding gene	predicted gene 1043
5	gene	37.09226	37.09236	negative	MGI_C57BL6J_5455328	Gm25551	ENSEMBL:ENSMUSG00000088707	MGI:5455328	rRNA gene	predicted gene, 25551
5	gene	37.16285	37.16573	positive	MGI_C57BL6J_3643506	Gm5107	NA	NA	unclassified gene	predicted gene 5107
5	gene	37.24194	37.29216	positive	MGI_C57BL6J_107793	Crmp1	NCBI_Gene:12933,ENSEMBL:ENSMUSG00000029121	MGI:107793	protein coding gene	collapsin response mediator protein 1
5	gene	37.28910	37.33763	negative	MGI_C57BL6J_1890596	Evc	NCBI_Gene:59056,ENSEMBL:ENSMUSG00000029122	MGI:1890596	protein coding gene	EvC ciliary complex subunit 1
5	pseudogene	37.29748	37.29885	negative	MGI_C57BL6J_5663072	Gm42935	NCBI_Gene:108169040,ENSEMBL:ENSMUSG00000107307	MGI:5663072	pseudogene	predicted gene 42935
5	gene	37.33848	37.42506	positive	MGI_C57BL6J_1915775	Evc2	NCBI_Gene:68525,ENSEMBL:ENSMUSG00000050248	MGI:1915775	protein coding gene	EvC ciliary complex subunit 2
5	pseudogene	37.40369	37.40562	negative	MGI_C57BL6J_3805556	Gm15732	NCBI_Gene:102638498,ENSEMBL:ENSMUSG00000057290	MGI:3805556	pseudogene	predicted gene 15732
5	gene	37.44682	37.71717	negative	MGI_C57BL6J_1927552	Stk32b	NCBI_Gene:64293,ENSEMBL:ENSMUSG00000029123	MGI:1927552	protein coding gene	serine/threonine kinase 32B
5	gene	37.73552	37.73982	positive	MGI_C57BL6J_2684993	Cytl1	NCBI_Gene:231162,ENSEMBL:ENSMUSG00000062329	MGI:2684993	protein coding gene	cytokine-like 1
5	gene	37.74809	37.77417	negative	MGI_C57BL6J_5623171	Gm40286	NCBI_Gene:105244728	MGI:5623171	lncRNA gene	predicted gene, 40286
5	gene	37.80731	37.80808	positive	MGI_C57BL6J_5663900	Gm43763	ENSEMBL:ENSMUSG00000107131	MGI:5663900	lncRNA gene	predicted gene 43763
5	gene	37.82048	37.82458	negative	MGI_C57BL6J_97168	Msx1	NCBI_Gene:17701,ENSEMBL:ENSMUSG00000048450	MGI:97168	protein coding gene	msh homeobox 1
5	gene	37.82056	37.82275	positive	MGI_C57BL6J_2136762	Msx1os	NCBI_Gene:93895	MGI:2136762	antisense lncRNA gene	msh homeobox 1 opposite strand
5	gene	37.82576	37.85204	positive	MGI_C57BL6J_5593152	Gm33993	NCBI_Gene:102637093	MGI:5593152	lncRNA gene	predicted gene, 33993
5	gene	37.83192	37.83553	negative	MGI_C57BL6J_5623173	Gm40288	NCBI_Gene:105244730	MGI:5623173	lncRNA gene	predicted gene, 40288
5	gene	37.86315	37.89793	positive	MGI_C57BL6J_5012237	Gm20052	NCBI_Gene:102637176,ENSEMBL:ENSMUSG00000106718	MGI:5012237	lncRNA gene	predicted gene, 20052
5	gene	37.96996	37.98360	negative	MGI_C57BL6J_1920666	1700061D14Rik	NA	NA	unclassified gene	RIKEN cDNA 1700061D14 gene
5	gene	37.97192	37.98774	positive	MGI_C57BL6J_5623174	Gm40289	NCBI_Gene:105244731,ENSEMBL:ENSMUSG00000107126	MGI:5623174	lncRNA gene	predicted gene, 40289
5	gene	38.02772	38.02801	negative	MGI_C57BL6J_5663899	Gm43762	ENSEMBL:ENSMUSG00000107129	MGI:5663899	unclassified gene	predicted gene 43762
5	gene	38.03863	38.13777	positive	MGI_C57BL6J_1918366	Stx18	NCBI_Gene:71116,ENSEMBL:ENSMUSG00000029125	MGI:1918366	protein coding gene	syntaxin 18
5	gene	38.13439	38.13610	negative	MGI_C57BL6J_5662995	Gm42858	ENSEMBL:ENSMUSG00000107276	MGI:5662995	unclassified gene	predicted gene 42858
5	gene	38.13719	38.15991	negative	MGI_C57BL6J_109149	Nsg1	NCBI_Gene:18196,ENSEMBL:ENSMUSG00000029126	MGI:109149	protein coding gene	neuron specific gene family member 1
5	gene	38.18973	38.22046	negative	MGI_C57BL6J_1922329	Zbtb49	NCBI_Gene:75079,ENSEMBL:ENSMUSG00000029127	MGI:1922329	protein coding gene	zinc finger and BTB domain containing 49
5	gene	38.22047	38.23431	positive	MGI_C57BL6J_107470	Lyar	NCBI_Gene:17089,ENSEMBL:ENSMUSG00000067367	MGI:107470	protein coding gene	Ly1 antibody reactive clone
5	gene	38.26018	38.26963	positive	MGI_C57BL6J_1913559	Tmem128	NCBI_Gene:66309,ENSEMBL:ENSMUSG00000067365	MGI:1913559	protein coding gene	transmembrane protein 128
5	gene	38.27597	38.30422	positive	MGI_C57BL6J_2388363	Otop1	NCBI_Gene:21906,ENSEMBL:ENSMUSG00000051596	MGI:2388363	protein coding gene	otopetrin 1
5	gene	38.31360	38.31601	positive	MGI_C57BL6J_5593352	Gm34193	NCBI_Gene:102637363	MGI:5593352	lncRNA gene	predicted gene, 34193
5	gene	38.31729	38.34438	negative	MGI_C57BL6J_5477054	Gm26560	NCBI_Gene:102637436,ENSEMBL:ENSMUSG00000097029	MGI:5477054	lncRNA gene	predicted gene, 26560
5	gene	38.31937	38.32252	positive	MGI_C57BL6J_94927	Drd5	NCBI_Gene:13492,ENSEMBL:ENSMUSG00000039358	MGI:94927	protein coding gene	dopamine receptor D5
5	gene	38.34439	38.34920	positive	MGI_C57BL6J_1925422	4930487D11Rik	NCBI_Gene:78172,ENSEMBL:ENSMUSG00000106932	MGI:1925422	lncRNA gene	RIKEN cDNA 4930487D11 gene
5	gene	38.34927	38.50315	negative	MGI_C57BL6J_2152844	Slc2a9	NCBI_Gene:117591,ENSEMBL:ENSMUSG00000005107	MGI:2152844	protein coding gene	solute carrier family 2 (facilitated glucose transporter), member 9
5	gene	38.35456	38.36256	positive	MGI_C57BL6J_5623175	Gm40290	NCBI_Gene:105244732	MGI:5623175	lncRNA gene	predicted gene, 40290
5	pseudogene	38.50746	38.50997	positive	MGI_C57BL6J_3801844	Gm15796	NCBI_Gene:105244733,ENSEMBL:ENSMUSG00000089646	MGI:3801844	pseudogene	predicted gene 15796
5	gene	38.52681	38.56322	negative	MGI_C57BL6J_1337100	Wdr1	NCBI_Gene:22388,ENSEMBL:ENSMUSG00000005103	MGI:1337100	protein coding gene	WD repeat domain 1
5	gene	38.54646	38.54659	positive	MGI_C57BL6J_5452026	Gm22249	ENSEMBL:ENSMUSG00000064419	MGI:5452026	snRNA gene	predicted gene, 22249
5	pseudogene	38.57484	38.57573	positive	MGI_C57BL6J_1921025	4930421P07Rik	NCBI_Gene:195712,ENSEMBL:ENSMUSG00000086422	MGI:1921025	pseudogene	RIKEN cDNA 4930421P07 gene
5	gene	38.66848	38.68483	negative	MGI_C57BL6J_2140750	Zfp518b	NCBI_Gene:100515,ENSEMBL:ENSMUSG00000046572	MGI:2140750	protein coding gene	zinc finger protein 518B
5	gene	38.68492	38.70667	positive	MGI_C57BL6J_5623176	Gm40291	NCBI_Gene:105244734	MGI:5623176	lncRNA gene	predicted gene, 40291
5	gene	38.69971	38.69981	negative	MGI_C57BL6J_5452556	Gm22779	ENSEMBL:ENSMUSG00000077273	MGI:5452556	snRNA gene	predicted gene, 22779
5	gene	38.70559	38.87686	negative	MGI_C57BL6J_1351468	Clnk	NCBI_Gene:27278,ENSEMBL:ENSMUSG00000039315	MGI:1351468	protein coding gene	cytokine-dependent hematopoietic cell linker
5	gene	38.70677	38.70955	positive	MGI_C57BL6J_5593879	Gm34720	NCBI_Gene:102638069	MGI:5593879	lncRNA gene	predicted gene, 34720
5	gene	38.73598	38.74790	positive	MGI_C57BL6J_1922786	Clnkos	ENSEMBL:ENSMUSG00000079528	MGI:1922786	antisense lncRNA gene	cytokine-dependent hematopoietic cell linker, opposite strand
5	pseudogene	39.00269	39.00303	negative	MGI_C57BL6J_5662994	Gm42857	ENSEMBL:ENSMUSG00000106924	MGI:5662994	pseudogene	predicted gene 42857
5	gene	39.08202	39.09946	positive	MGI_C57BL6J_5826574	Gm46937	NCBI_Gene:108169107	MGI:5826574	lncRNA gene	predicted gene, 46937
5	gene	39.21318	39.33890	negative	MGI_C57BL6J_5623178	Gm40293	NCBI_Gene:105244736,ENSEMBL:ENSMUSG00000106794	MGI:5623178	lncRNA gene	predicted gene, 40293
5	gene	39.30712	39.32878	positive	MGI_C57BL6J_5623177	Gm40292	NCBI_Gene:105244735,ENSEMBL:ENSMUSG00000107031	MGI:5623177	lncRNA gene	predicted gene, 40292
5	pseudogene	39.33736	39.33782	negative	MGI_C57BL6J_5663593	Gm43456	ENSEMBL:ENSMUSG00000106876	MGI:5663593	pseudogene	predicted gene 43456
5	gene	39.34669	39.34694	positive	MGI_C57BL6J_5455282	Gm25505	ENSEMBL:ENSMUSG00000087845	MGI:5455282	unclassified non-coding RNA gene	predicted gene, 25505
5	pseudogene	39.40115	39.40232	negative	MGI_C57BL6J_3645662	Gm5291	NCBI_Gene:384174,ENSEMBL:ENSMUSG00000107030	MGI:3645662	pseudogene	predicted gene 5291
5	gene	39.44200	39.44357	negative	MGI_C57BL6J_1926038	4930421C12Rik	ENSEMBL:ENSMUSG00000106851	MGI:1926038	unclassified gene	RIKEN cDNA 4930421C12 gene
5	gene	39.45810	39.47768	positive	MGI_C57BL6J_5662661	Gm42524	ENSEMBL:ENSMUSG00000106679	MGI:5662661	lncRNA gene	predicted gene 42524
5	gene	39.46175	39.60357	negative	MGI_C57BL6J_1922345	4930513D17Rik	NCBI_Gene:75095,ENSEMBL:ENSMUSG00000106741	MGI:1922345	lncRNA gene	RIKEN cDNA 4930513D17 gene
5	gene	39.52098	39.52110	negative	MGI_C57BL6J_5455154	Gm25377	ENSEMBL:ENSMUSG00000077522	MGI:5455154	snoRNA gene	predicted gene, 25377
5	gene	39.60693	39.61034	negative	MGI_C57BL6J_5662665	Gm42528	ENSEMBL:ENSMUSG00000107134	MGI:5662665	unclassified gene	predicted gene 42528
5	gene	39.61393	39.75547	negative	MGI_C57BL6J_1201606	Hs3st1	NCBI_Gene:15476,ENSEMBL:ENSMUSG00000051022	MGI:1201606	protein coding gene	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
5	pseudogene	39.79813	39.79957	positive	MGI_C57BL6J_3646286	Gm7816	NCBI_Gene:665839,ENSEMBL:ENSMUSG00000083261	MGI:3646286	pseudogene	predicted pseudogene 7816
5	gene	39.97567	39.98563	negative	MGI_C57BL6J_5594350	Gm35191	NCBI_Gene:102638690,ENSEMBL:ENSMUSG00000107070	MGI:5594350	lncRNA gene	predicted gene, 35191
5	pseudogene	40.32844	40.32943	positive	MGI_C57BL6J_3780980	Gm2810	NCBI_Gene:100040502,ENSEMBL:ENSMUSG00000082938	MGI:3780980	pseudogene	predicted pseudogene 2810
5	gene	40.40575	40.40593	negative	MGI_C57BL6J_5452799	Gm23022	ENSEMBL:ENSMUSG00000089393	MGI:5452799	snRNA gene	predicted gene, 23022
5	gene	41.28124	41.28290	positive	MGI_C57BL6J_1921963	4930519E07Rik	ENSEMBL:ENSMUSG00000106865	MGI:1921963	unclassified gene	RIKEN cDNA 4930519E07 gene
5	pseudogene	41.34210	41.34300	positive	MGI_C57BL6J_3645925	Gm4754	NCBI_Gene:208522,ENSEMBL:ENSMUSG00000106895	MGI:3645925	pseudogene	predicted gene 4754
5	pseudogene	41.42158	41.42204	negative	MGI_C57BL6J_5663943	Gm43806	ENSEMBL:ENSMUSG00000107135	MGI:5663943	pseudogene	predicted gene 43806
5	gene	41.60582	41.61633	negative	MGI_C57BL6J_5594539	Gm35380	NCBI_Gene:102638943	MGI:5594539	lncRNA gene	predicted gene, 35380
5	gene	41.62497	41.70819	negative	MGI_C57BL6J_1917285	Rab28	NCBI_Gene:100972,ENSEMBL:ENSMUSG00000029128	MGI:1917285	protein coding gene	RAB28, member RAS oncogene family
5	pseudogene	41.71709	41.71762	positive	MGI_C57BL6J_5011189	Gm19004	NCBI_Gene:100418110	MGI:5011189	pseudogene	predicted gene, 19004
5	gene	41.76148	41.76450	negative	MGI_C57BL6J_108015	Nkx3-2	NCBI_Gene:12020,ENSEMBL:ENSMUSG00000049691	MGI:108015	protein coding gene	NK3 homeobox 2
5	gene	41.76219	41.76508	positive	MGI_C57BL6J_5826547	Gm46910	NCBI_Gene:108169041	MGI:5826547	lncRNA gene	predicted gene, 46910
5	gene	41.78754	41.84436	negative	MGI_C57BL6J_2444804	Bod1l	NCBI_Gene:665775,ENSEMBL:ENSMUSG00000061755	MGI:2444804	protein coding gene	biorientation of chromosomes in cell division 1-like
5	pseudogene	41.85271	41.85425	negative	MGI_C57BL6J_3645526	Gm5298	NCBI_Gene:384308,ENSEMBL:ENSMUSG00000107259	MGI:3645526	pseudogene	predicted gene 5298
5	gene	41.89134	41.89142	positive	MGI_C57BL6J_5530900	Mir6414	miRBase:MI0021952,NCBI_Gene:102465225,ENSEMBL:ENSMUSG00000098264	MGI:5530900	miRNA gene	microRNA 6414
5	pseudogene	41.91905	41.94126	negative	MGI_C57BL6J_5012341	Gm20156	NCBI_Gene:100504296,ENSEMBL:ENSMUSG00000106884	MGI:5012341	pseudogene	predicted gene, 20156
5	gene	42.05293	42.05705	positive	MGI_C57BL6J_5623179	Gm40294	NCBI_Gene:105244737	MGI:5623179	lncRNA gene	predicted gene, 40294
5	gene	42.06796	42.21680	positive	MGI_C57BL6J_3648966	Gm16223	NCBI_Gene:433882,ENSEMBL:ENSMUSG00000067285	MGI:3648966	protein coding gene	predicted gene 16223
5	pseudogene	42.49995	42.50058	negative	MGI_C57BL6J_3644423	Gm7181	NCBI_Gene:636612,ENSEMBL:ENSMUSG00000106813	MGI:3644423	pseudogene	predicted gene 7181
5	gene	42.51397	42.52580	negative	MGI_C57BL6J_5623180	Gm40295	NCBI_Gene:105244738	MGI:5623180	lncRNA gene	predicted gene, 40295
5	pseudogene	42.96310	42.96491	negative	MGI_C57BL6J_3648967	Gm5554	NCBI_Gene:433883,ENSEMBL:ENSMUSG00000106622	MGI:3648967	pseudogene	predicted gene 5554
5	gene	43.02654	43.03853	negative	MGI_C57BL6J_5663837	Gm43700	NCBI_Gene:108169042,ENSEMBL:ENSMUSG00000107193	MGI:5663837	lncRNA gene	predicted gene 43700
5	gene	43.03974	43.04406	negative	MGI_C57BL6J_5662848	Gm42711	ENSEMBL:ENSMUSG00000106501	MGI:5662848	lncRNA gene	predicted gene 42711
5	gene	43.05926	43.06088	positive	MGI_C57BL6J_5662690	Gm42553	ENSEMBL:ENSMUSG00000105416	MGI:5662690	unclassified gene	predicted gene 42553
5	gene	43.14383	43.14833	negative	MGI_C57BL6J_5662689	Gm42552	ENSEMBL:ENSMUSG00000105087	MGI:5662689	unclassified gene	predicted gene 42552
5	gene	43.15169	43.23535	negative	MGI_C57BL6J_3648234	Gm7854	NCBI_Gene:665934,ENSEMBL:ENSMUSG00000085720	MGI:3648234	lncRNA gene	predicted gene 7854
5	gene	43.20870	43.21624	positive	MGI_C57BL6J_5826548	Gm46911	NCBI_Gene:108169043	MGI:5826548	protein coding gene	predicted gene, 46911
5	gene	43.23231	43.28972	positive	MGI_C57BL6J_2442640	Cpeb2	NCBI_Gene:231207,ENSEMBL:ENSMUSG00000039782	MGI:2442640	protein coding gene	cytoplasmic polyadenylation element binding protein 2
5	gene	43.24818	43.24976	positive	MGI_C57BL6J_5662688	Gm42551	ENSEMBL:ENSMUSG00000105374	MGI:5662688	unclassified gene	predicted gene 42551
5	gene	43.26516	43.26637	positive	MGI_C57BL6J_1924319	6030400A10Rik	ENSEMBL:ENSMUSG00000105326	MGI:1924319	unclassified gene	RIKEN cDNA 6030400A10 gene
5	gene	43.35305	43.35526	negative	MGI_C57BL6J_5663157	Gm43020	ENSEMBL:ENSMUSG00000104846	MGI:5663157	lncRNA gene	predicted gene 43020
5	gene	43.37645	43.37964	positive	MGI_C57BL6J_5663836	Gm43699	ENSEMBL:ENSMUSG00000107244	MGI:5663836	lncRNA gene	predicted gene 43699
5	gene	43.47069	43.47485	positive	MGI_C57BL6J_5663158	Gm43021	ENSEMBL:ENSMUSG00000104691	MGI:5663158	lncRNA gene	predicted gene 43021
5	gene	43.51540	43.61913	positive	MGI_C57BL6J_1925911	C1qtnf7	NCBI_Gene:109323,ENSEMBL:ENSMUSG00000061535	MGI:1925911	protein coding gene	C1q and tumor necrosis factor related protein 7
5	gene	43.52863	43.53289	positive	MGI_C57BL6J_5663159	Gm43022	ENSEMBL:ENSMUSG00000104547	MGI:5663159	unclassified gene	predicted gene 43022
5	gene	43.54993	43.60173	negative	MGI_C57BL6J_3801874	Gm15866	NCBI_Gene:105244739,ENSEMBL:ENSMUSG00000087290	MGI:3801874	lncRNA gene	predicted gene 15866
5	gene	43.57582	43.57793	positive	MGI_C57BL6J_5663160	Gm43023	ENSEMBL:ENSMUSG00000104912	MGI:5663160	unclassified gene	predicted gene 43023
5	gene	43.66235	43.74097	positive	MGI_C57BL6J_1924487	Cc2d2a	NCBI_Gene:231214,ENSEMBL:ENSMUSG00000039765	MGI:1924487	protein coding gene	coiled-coil and C2 domain containing 2A
5	gene	43.67056	43.67194	negative	MGI_C57BL6J_5594921	Gm35762	NCBI_Gene:102639450	MGI:5594921	lncRNA gene	predicted gene, 35762
5	gene	43.74462	43.82164	negative	MGI_C57BL6J_2152883	Fbxl5	NCBI_Gene:242960,ENSEMBL:ENSMUSG00000039753	MGI:2152883	protein coding gene	F-box and leucine-rich repeat protein 5
5	gene	43.75291	43.75427	negative	MGI_C57BL6J_5662599	Gm42462	ENSEMBL:ENSMUSG00000104728	MGI:5662599	unclassified gene	predicted gene 42462
5	gene	43.78224	43.78477	positive	MGI_C57BL6J_5663319	Gm43182	ENSEMBL:ENSMUSG00000104823	MGI:5663319	unclassified gene	predicted gene 43182
5	gene	43.78405	43.78612	negative	MGI_C57BL6J_5663318	Gm43181	ENSEMBL:ENSMUSG00000106609	MGI:5663318	unclassified gene	predicted gene 43181
5	gene	43.80770	43.80874	negative	MGI_C57BL6J_5662692	Gm42555	ENSEMBL:ENSMUSG00000104701	MGI:5662692	lncRNA gene	predicted gene 42555
5	gene	43.81888	43.84399	positive	MGI_C57BL6J_105370	Bst1	NCBI_Gene:12182,ENSEMBL:ENSMUSG00000029082	MGI:105370	protein coding gene	bone marrow stromal cell antigen 1
5	gene	43.86855	43.91237	positive	MGI_C57BL6J_107474	Cd38	NCBI_Gene:12494,ENSEMBL:ENSMUSG00000029084	MGI:107474	protein coding gene	CD38 antigen
5	gene	43.87603	43.87730	positive	MGI_C57BL6J_3801812	Gm16014	ENSEMBL:ENSMUSG00000086479	MGI:3801812	lncRNA gene	predicted gene 16014
5	gene	43.90922	43.90989	negative	MGI_C57BL6J_3801811	Gm16015	ENSEMBL:ENSMUSG00000087281	MGI:3801811	lncRNA gene	predicted gene 16015
5	gene	43.91314	43.91392	positive	MGI_C57BL6J_3645078	Gm7879	NCBI_Gene:665989,ENSEMBL:ENSMUSG00000033036	MGI:3645078	protein coding gene	predicted pseudogene 7879
5	pseudogene	43.91669	43.91851	positive	MGI_C57BL6J_3647603	Gm7882	NCBI_Gene:665994,ENSEMBL:ENSMUSG00000093859	MGI:3647603	pseudogene	predicted gene 7882
5	pseudogene	43.94385	43.94452	negative	MGI_C57BL6J_3645663	Gm5292	NCBI_Gene:384179,ENSEMBL:ENSMUSG00000059565	MGI:3645663	pseudogene	predicted gene 5292
5	gene	43.94812	43.94866	positive	MGI_C57BL6J_5663320	Gm43183	ENSEMBL:ENSMUSG00000106573	MGI:5663320	unclassified gene	predicted gene 43183
5	gene	43.94812	43.94866	negative	MGI_C57BL6J_5663321	Gm43184	ENSEMBL:ENSMUSG00000105831	MGI:5663321	unclassified gene	predicted gene 43184
5	gene	43.97886	43.98183	negative	MGI_C57BL6J_1096350	Fgfbp1	NCBI_Gene:14181,ENSEMBL:ENSMUSG00000048373	MGI:1096350	protein coding gene	fibroblast growth factor binding protein 1
5	gene	43.99362	44.10225	negative	MGI_C57BL6J_1100886	Prom1	NCBI_Gene:19126,ENSEMBL:ENSMUSG00000029086	MGI:1100886	protein coding gene	prominin 1
5	gene	44.06820	44.09085	negative	MGI_C57BL6J_5662853	Gm42716	ENSEMBL:ENSMUSG00000105264	MGI:5662853	lncRNA gene	predicted gene 42716
5	gene	44.09965	44.10048	negative	MGI_C57BL6J_1919342	2010320H13Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 2010320H13 gene
5	gene	44.10044	44.10251	positive	MGI_C57BL6J_3648398	Gm16401	ENSEMBL:ENSMUSG00000072962	MGI:3648398	lncRNA gene	predicted gene 16401
5	gene	44.10585	44.10754	positive	MGI_C57BL6J_5663103	Gm42966	ENSEMBL:ENSMUSG00000105048	MGI:5663103	unclassified gene	predicted gene 42966
5	gene	44.10837	44.13396	negative	MGI_C57BL6J_5595059	Gm35900	NCBI_Gene:102639636	MGI:5595059	lncRNA gene	predicted gene, 35900
5	gene	44.13439	44.13495	positive	MGI_C57BL6J_5662566	Gm42429	ENSEMBL:ENSMUSG00000105373	MGI:5662566	unclassified gene	predicted gene 42429
5	gene	44.13662	44.13692	positive	MGI_C57BL6J_5662565	Gm42428	ENSEMBL:ENSMUSG00000105353	MGI:5662565	lncRNA gene	predicted gene 42428
5	gene	44.13798	44.14327	positive	MGI_C57BL6J_5662564	Gm42427	ENSEMBL:ENSMUSG00000105263	MGI:5662564	unclassified gene	predicted gene 42427
5	gene	44.17515	44.22877	negative	MGI_C57BL6J_2683537	Tapt1	NCBI_Gene:231225,ENSEMBL:ENSMUSG00000046985	MGI:2683537	protein coding gene	transmembrane anterior posterior transformation 1
5	gene	44.21380	44.21726	negative	MGI_C57BL6J_2444377	E430021H15Rik	ENSEMBL:ENSMUSG00000105519	MGI:2444377	unclassified gene	RIKEN cDNA E430021H15 gene
5	gene	44.21968	44.22400	positive	MGI_C57BL6J_5663119	Gm42982	ENSEMBL:ENSMUSG00000105503	MGI:5663119	lncRNA gene	predicted gene 42982
5	gene	44.22451	44.22532	positive	MGI_C57BL6J_5663120	Gm42983	ENSEMBL:ENSMUSG00000105149	MGI:5663120	unclassified gene	predicted gene 42983
5	gene	44.22659	44.24355	positive	MGI_C57BL6J_5663121	Gm42984	ENSEMBL:ENSMUSG00000104784	MGI:5663121	lncRNA gene	predicted gene 42984
5	gene	44.22933	44.24216	positive	MGI_C57BL6J_5595118	Gm35959	NCBI_Gene:102639711	MGI:5595118	lncRNA gene	predicted gene, 35959
5	gene	44.30629	44.36926	positive	MGI_C57BL6J_5623181	Gm40296	NCBI_Gene:105244740	MGI:5623181	lncRNA gene	predicted gene, 40296
5	pseudogene	44.35486	44.35675	negative	MGI_C57BL6J_5662835	Gm42698	ENSEMBL:ENSMUSG00000106394	MGI:5662835	pseudogene	predicted gene 42698
5	gene	44.35571	44.35605	positive	MGI_C57BL6J_5663251	Gm43114	ENSEMBL:ENSMUSG00000104541	MGI:5663251	unclassified gene	predicted gene 43114
5	pseudogene	44.40580	44.40674	negative	MGI_C57BL6J_3645504	Gm5865	NCBI_Gene:545747,ENSEMBL:ENSMUSG00000104923	MGI:3645504	pseudogene	predicted gene 5865
5	gene	44.41273	44.42765	negative	MGI_C57BL6J_5595176	Gm36017	NCBI_Gene:102639787,ENSEMBL:ENSMUSG00000104800	MGI:5595176	lncRNA gene	predicted gene, 36017
5	gene	44.43066	44.43607	positive	MGI_C57BL6J_5623182	Gm40297	NCBI_Gene:105244741	MGI:5623182	lncRNA gene	predicted gene, 40297
5	gene	44.43608	44.79976	negative	MGI_C57BL6J_894670	Ldb2	NCBI_Gene:16826,ENSEMBL:ENSMUSG00000039706	MGI:894670	protein coding gene	LIM domain binding 2
5	gene	44.49217	44.49542	negative	MGI_C57BL6J_5663118	Gm42981	ENSEMBL:ENSMUSG00000105282	MGI:5663118	unclassified gene	predicted gene 42981
5	gene	44.51366	44.51456	negative	MGI_C57BL6J_1924798	8030487O14Rik	ENSEMBL:ENSMUSG00000105136	MGI:1924798	unclassified gene	RIKEN cDNA 8030487O14 gene
5	gene	44.51696	44.51771	negative	MGI_C57BL6J_5663643	Gm43506	ENSEMBL:ENSMUSG00000106332	MGI:5663643	unclassified gene	predicted gene 43506
5	gene	44.58506	44.58520	positive	MGI_C57BL6J_5663642	Gm43505	ENSEMBL:ENSMUSG00000105648	MGI:5663642	unclassified gene	predicted gene 43505
5	gene	44.62392	44.62770	negative	MGI_C57BL6J_5663645	Gm43508	ENSEMBL:ENSMUSG00000105861	MGI:5663645	unclassified gene	predicted gene 43508
5	gene	44.64148	44.66215	positive	MGI_C57BL6J_5663644	Gm43507	ENSEMBL:ENSMUSG00000104894	MGI:5663644	lncRNA gene	predicted gene 43507
5	gene	44.66469	44.66673	negative	MGI_C57BL6J_5663641	Gm43504	ENSEMBL:ENSMUSG00000104990	MGI:5663641	unclassified gene	predicted gene 43504
5	gene	44.68019	44.68360	negative	MGI_C57BL6J_5663640	Gm43503	ENSEMBL:ENSMUSG00000105347	MGI:5663640	unclassified gene	predicted gene 43503
5	gene	44.70088	44.70689	negative	MGI_C57BL6J_3781542	Gm3364	ENSEMBL:ENSMUSG00000105224	MGI:3781542	lncRNA gene	predicted gene 3364
5	gene	44.73634	44.73855	negative	MGI_C57BL6J_2444788	E030026E10Rik	ENSEMBL:ENSMUSG00000104851	MGI:2444788	unclassified gene	RIKEN cDNA E030026E10 gene
5	gene	44.75116	44.75376	negative	MGI_C57BL6J_5663646	Gm43509	ENSEMBL:ENSMUSG00000106603	MGI:5663646	unclassified gene	predicted gene 43509
5	gene	44.86515	44.87714	positive	MGI_C57BL6J_5662887	Gm42750	ENSEMBL:ENSMUSG00000106656	MGI:5662887	lncRNA gene	predicted gene 42750
5	gene	44.91846	44.92525	negative	MGI_C57BL6J_5595235	Gm36076	NCBI_Gene:102639864	MGI:5595235	lncRNA gene	predicted gene, 36076
5	gene	44.96620	44.97881	positive	MGI_C57BL6J_1923033	4930431F12Rik	NCBI_Gene:75783,ENSEMBL:ENSMUSG00000062496	MGI:1923033	lncRNA gene	RIKEN cDNA 4930431F12 gene
5	pseudogene	44.98386	44.98424	negative	MGI_C57BL6J_3708715	Gm10205	ENSEMBL:ENSMUSG00000067331	MGI:3708715	pseudogene	predicted gene 10205
5	gene	45.00917	45.42440	negative	MGI_C57BL6J_1277236	D5Ertd615e	NCBI_Gene:52401,ENSEMBL:ENSMUSG00000029092	MGI:1277236	lncRNA gene	DNA segment, Chr 5, ERATO Doi 615, expressed
5	gene	45.16334	45.17498	positive	MGI_C57BL6J_5826549	Gm46912	NCBI_Gene:108169044	MGI:5826549	lncRNA gene	predicted gene, 46912
5	gene	45.19267	45.25193	negative	MGI_C57BL6J_5663440	Gm43303	ENSEMBL:ENSMUSG00000104781	MGI:5663440	lncRNA gene	predicted gene 43303
5	gene	45.24365	45.24731	negative	MGI_C57BL6J_5662656	Gm42519	ENSEMBL:ENSMUSG00000105247	MGI:5662656	unclassified gene	predicted gene 42519
5	gene	45.43402	45.45024	negative	MGI_C57BL6J_97836	Qdpr	NCBI_Gene:110391,ENSEMBL:ENSMUSG00000015806	MGI:97836	protein coding gene	quinoid dihydropteridine reductase
5	gene	45.43439	45.45014	positive	MGI_C57BL6J_5648986	Gm42413	ENSEMBL:ENSMUSG00000105255	MGI:5648986	lncRNA gene	predicted gene, 42413
5	gene	45.45375	45.46415	positive	MGI_C57BL6J_3646230	Clrn2	NCBI_Gene:624224,ENSEMBL:ENSMUSG00000049530	MGI:3646230	protein coding gene	clarin 2
5	gene	45.49337	45.51269	positive	MGI_C57BL6J_1914238	Lap3	NCBI_Gene:66988,ENSEMBL:ENSMUSG00000039682	MGI:1914238	protein coding gene	leucine aminopeptidase 3
5	gene	45.52023	45.52928	positive	MGI_C57BL6J_1914249	Med28	NCBI_Gene:66999,ENSEMBL:ENSMUSG00000015804	MGI:1914249	protein coding gene	mediator complex subunit 28
5	gene	45.52970	45.63961	negative	MGI_C57BL6J_2442958	Fam184b	NCBI_Gene:58227,ENSEMBL:ENSMUSG00000015879	MGI:2442958	protein coding gene	family with sequence similarity 184, member B
5	gene	45.53107	45.53311	positive	MGI_C57BL6J_5662658	Gm42521	ENSEMBL:ENSMUSG00000105745	MGI:5662658	unclassified gene	predicted gene 42521
5	gene	45.55668	45.55818	positive	MGI_C57BL6J_5662657	Gm42520	ENSEMBL:ENSMUSG00000104837	MGI:5662657	unclassified gene	predicted gene 42520
5	gene	45.63870	45.64547	positive	MGI_C57BL6J_2441755	9630001P10Rik	NCBI_Gene:319251,ENSEMBL:ENSMUSG00000097825	MGI:2441755	lncRNA gene	RIKEN cDNA 9630001P10 gene
5	pseudogene	45.65695	45.65757	negative	MGI_C57BL6J_5663504	Gm43367	ENSEMBL:ENSMUSG00000105634	MGI:5663504	pseudogene	predicted gene 43367
5	gene	45.66007	45.66272	positive	MGI_C57BL6J_5663503	Gm43366	ENSEMBL:ENSMUSG00000104665	MGI:5663503	unclassified gene	predicted gene 43366
5	gene	45.66870	45.66971	negative	MGI_C57BL6J_1917038	1600023N17Rik	NCBI_Gene:69788,ENSEMBL:ENSMUSG00000104986	MGI:1917038	lncRNA gene	RIKEN cDNA 1600023N17 gene
5	gene	45.66987	45.70055	positive	MGI_C57BL6J_1930197	Ncapg	NCBI_Gene:54392,ENSEMBL:ENSMUSG00000015880	MGI:1930197	protein coding gene	non-SMC condensin I complex, subunit G
5	gene	45.69718	45.85778	negative	MGI_C57BL6J_2651932	Lcorl	NCBI_Gene:209707,ENSEMBL:ENSMUSG00000015882	MGI:2651932	protein coding gene	ligand dependent nuclear receptor corepressor-like
5	gene	45.70199	45.71572	positive	MGI_C57BL6J_5595560	Gm36401	NCBI_Gene:102640298,ENSEMBL:ENSMUSG00000104342	MGI:5595560	lncRNA gene	predicted gene, 36401
5	gene	45.71967	45.72758	negative	MGI_C57BL6J_3781592	Gm3414	NCBI_Gene:100041576	MGI:3781592	lncRNA gene	predicted gene 3414
5	pseudogene	45.75585	45.75754	negative	MGI_C57BL6J_5434375	Gm21020	NCBI_Gene:100534298	MGI:5434375	pseudogene	predicted gene, 21020
5	gene	45.75827	45.76169	negative	MGI_C57BL6J_5663338	Gm43201	ENSEMBL:ENSMUSG00000104852	MGI:5663338	unclassified gene	predicted gene 43201
5	pseudogene	45.76887	45.76974	negative	MGI_C57BL6J_5579742	Gm29036	ENSEMBL:ENSMUSG00000101587	MGI:5579742	pseudogene	predicted gene 29036
5	gene	45.77002	45.77218	negative	MGI_C57BL6J_5663337	Gm43200	ENSEMBL:ENSMUSG00000105457	MGI:5663337	unclassified gene	predicted gene 43200
5	gene	45.85764	45.85876	positive	MGI_C57BL6J_1921205	4930449I04Rik	ENSEMBL:ENSMUSG00000105459	MGI:1921205	protein coding gene	RIKEN cDNA 4930449I04 gene
5	gene	45.92682	45.93241	negative	MGI_C57BL6J_1925356	4930405L22Rik	NCBI_Gene:78106,ENSEMBL:ENSMUSG00000106602	MGI:1925356	lncRNA gene	RIKEN cDNA 4930405L22 gene
5	gene	45.93255	45.97541	positive	MGI_C57BL6J_5623183	Gm40298	NCBI_Gene:105244742	MGI:5623183	lncRNA gene	predicted gene, 40298
5	pseudogene	46.41422	46.41541	positive	MGI_C57BL6J_3643448	Gm7931	NCBI_Gene:100503799,ENSEMBL:ENSMUSG00000067321	MGI:3643448	pseudogene	predicted pseudogene 7931
5	gene	46.50213	46.50334	positive	MGI_C57BL6J_5663230	Gm43093	ENSEMBL:ENSMUSG00000106875	MGI:5663230	unclassified gene	predicted gene 43093
5	gene	46.79468	46.79653	positive	MGI_C57BL6J_5663229	Gm43092	ENSEMBL:ENSMUSG00000107113	MGI:5663229	unclassified gene	predicted gene 43092
5	gene	47.15365	47.15460	positive	MGI_C57BL6J_5663738	Gm43601	ENSEMBL:ENSMUSG00000104660	MGI:5663738	unclassified gene	predicted gene 43601
5	pseudogene	47.63449	47.63533	positive	MGI_C57BL6J_5010009	Gm17824	NCBI_Gene:100384874,ENSEMBL:ENSMUSG00000106402	MGI:5010009	pseudogene	predicted gene, 17824
5	pseudogene	47.69985	47.70072	positive	MGI_C57BL6J_3781188	Gm3010	NCBI_Gene:100040865,ENSEMBL:ENSMUSG00000105616	MGI:3781188	pseudogene	predicted gene 3010
5	pseudogene	47.97501	47.97534	positive	MGI_C57BL6J_5663564	Gm43427	ENSEMBL:ENSMUSG00000105994	MGI:5663564	pseudogene	predicted gene 43427
5	gene	47.98310	48.30774	positive	MGI_C57BL6J_1315205	Slit2	NCBI_Gene:20563,ENSEMBL:ENSMUSG00000031558	MGI:1315205	protein coding gene	slit guidance ligand 2
5	gene	48.00306	48.00571	negative	MGI_C57BL6J_1922330	4930518C09Rik	ENSEMBL:ENSMUSG00000092309	MGI:1922330	lncRNA gene	RIKEN cDNA 4930518C09 gene
5	gene	48.00578	48.00792	positive	MGI_C57BL6J_5141940	Gm20475	ENSEMBL:ENSMUSG00000092559	MGI:5141940	lncRNA gene	predicted gene 20475
5	gene	48.05805	48.06065	positive	MGI_C57BL6J_5663563	Gm43426	ENSEMBL:ENSMUSG00000106214	MGI:5663563	unclassified gene	predicted gene 43426
5	gene	48.12708	48.12870	positive	MGI_C57BL6J_5662673	Gm42536	ENSEMBL:ENSMUSG00000105502	MGI:5662673	unclassified gene	predicted gene 42536
5	gene	48.21167	48.21424	positive	MGI_C57BL6J_5662674	Gm42537	ENSEMBL:ENSMUSG00000105184	MGI:5662674	unclassified gene	predicted gene 42537
5	gene	48.22394	48.22405	positive	MGI_C57BL6J_3618751	Mir218-1	miRBase:MI0000700,NCBI_Gene:723822,ENSEMBL:ENSMUSG00000065603	MGI:3618751	miRNA gene	microRNA 218-1
5	gene	48.27967	48.28142	positive	MGI_C57BL6J_5662671	Gm42534	ENSEMBL:ENSMUSG00000105086	MGI:5662671	unclassified gene	predicted gene 42534
5	gene	48.32461	48.32601	positive	MGI_C57BL6J_5662672	Gm42535	ENSEMBL:ENSMUSG00000106604	MGI:5662672	unclassified gene	predicted gene 42535
5	gene	48.32795	48.41429	positive	MGI_C57BL6J_1917842	5730480H06Rik	NCBI_Gene:70592,ENSEMBL:ENSMUSG00000029089	MGI:1917842	protein coding gene	RIKEN cDNA 5730480H06 gene
5	gene	48.37233	48.38885	positive	MGI_C57BL6J_1914018	Pacrgl	NCBI_Gene:66768	MGI:1914018	protein coding gene	PARK2 co-regulated-like
5	gene	48.38950	49.52491	negative	MGI_C57BL6J_1933131	Kcnip4	NCBI_Gene:80334,ENSEMBL:ENSMUSG00000029088	MGI:1933131	protein coding gene	Kv channel interacting protein 4
5	gene	48.53534	48.53794	negative	MGI_C57BL6J_5663968	Gm43831	ENSEMBL:ENSMUSG00000105653	MGI:5663968	unclassified gene	predicted gene 43831
5	gene	48.59089	48.59999	positive	MGI_C57BL6J_5313147	Gm20700	ENSEMBL:ENSMUSG00000093502	MGI:5313147	lncRNA gene	predicted gene 20700
5	gene	48.62467	48.62715	negative	MGI_C57BL6J_5663785	Gm43648	ENSEMBL:ENSMUSG00000105574	MGI:5663785	unclassified gene	predicted gene 43648
5	pseudogene	48.66591	48.66738	positive	MGI_C57BL6J_5011216	Gm19031	NCBI_Gene:100418143,ENSEMBL:ENSMUSG00000093748	MGI:5011216	pseudogene	predicted gene, 19031
5	gene	48.71209	48.71589	negative	MGI_C57BL6J_5663966	Gm43829	ENSEMBL:ENSMUSG00000105530	MGI:5663966	unclassified gene	predicted gene 43829
5	gene	48.79090	48.79197	negative	MGI_C57BL6J_5663967	Gm43830	ENSEMBL:ENSMUSG00000105454	MGI:5663967	unclassified gene	predicted gene 43830
5	gene	48.79901	48.80128	negative	MGI_C57BL6J_5663456	Gm43319	ENSEMBL:ENSMUSG00000105958	MGI:5663456	unclassified gene	predicted gene 43319
5	gene	48.80273	48.80401	negative	MGI_C57BL6J_5663056	Gm42919	ENSEMBL:ENSMUSG00000106404	MGI:5663056	unclassified gene	predicted gene 42919
5	gene	48.81948	48.82188	negative	MGI_C57BL6J_5663458	Gm43321	ENSEMBL:ENSMUSG00000106408	MGI:5663458	unclassified gene	predicted gene 43321
5	gene	48.84342	48.84634	negative	MGI_C57BL6J_5663457	Gm43320	ENSEMBL:ENSMUSG00000106414	MGI:5663457	unclassified gene	predicted gene 43320
5	pseudogene	48.92412	48.92449	positive	MGI_C57BL6J_3708717	Gm10025	ENSEMBL:ENSMUSG00000057577	MGI:3708717	pseudogene	predicted gene 10025
5	gene	48.92495	48.92874	negative	MGI_C57BL6J_3644560	Gm10048	ENSEMBL:ENSMUSG00000103544	MGI:3644560	unclassified gene	predicted gene 10048
5	gene	48.94802	48.94997	negative	MGI_C57BL6J_5663455	Gm43318	ENSEMBL:ENSMUSG00000105974	MGI:5663455	unclassified gene	predicted gene 43318
5	gene	48.97828	48.97959	negative	MGI_C57BL6J_5663478	Gm43341	ENSEMBL:ENSMUSG00000105791	MGI:5663478	unclassified gene	predicted gene 43341
5	gene	48.99771	48.99854	negative	MGI_C57BL6J_1924665	C030015E24Rik	ENSEMBL:ENSMUSG00000106469	MGI:1924665	unclassified gene	RIKEN cDNA C030015E24 gene
5	gene	49.00541	49.00796	negative	MGI_C57BL6J_5663454	Gm43317	ENSEMBL:ENSMUSG00000104655	MGI:5663454	unclassified gene	predicted gene 43317
5	gene	49.01751	49.01881	negative	MGI_C57BL6J_5663453	Gm43316	ENSEMBL:ENSMUSG00000105332	MGI:5663453	unclassified gene	predicted gene 43316
5	gene	49.02101	49.02234	negative	MGI_C57BL6J_5662903	Gm42766	ENSEMBL:ENSMUSG00000104929	MGI:5662903	unclassified gene	predicted gene 42766
5	gene	49.06901	49.07146	negative	MGI_C57BL6J_5663183	Gm43046	ENSEMBL:ENSMUSG00000106244	MGI:5663183	unclassified gene	predicted gene 43046
5	gene	49.07000	49.07346	positive	MGI_C57BL6J_5663184	Gm43047	ENSEMBL:ENSMUSG00000105620	MGI:5663184	unclassified gene	predicted gene 43047
5	gene	49.07428	49.07491	negative	MGI_C57BL6J_5662904	Gm42767	ENSEMBL:ENSMUSG00000104562	MGI:5662904	unclassified gene	predicted gene 42767
5	gene	49.08387	49.08677	negative	MGI_C57BL6J_5662905	Gm42768	ENSEMBL:ENSMUSG00000104661	MGI:5662905	unclassified gene	predicted gene 42768
5	gene	49.11576	49.11742	negative	MGI_C57BL6J_5662906	Gm42769	ENSEMBL:ENSMUSG00000105922	MGI:5662906	unclassified gene	predicted gene 42769
5	gene	49.12459	49.12874	negative	MGI_C57BL6J_5662907	Gm42770	ENSEMBL:ENSMUSG00000105983	MGI:5662907	unclassified gene	predicted gene 42770
5	gene	49.21730	49.21769	negative	MGI_C57BL6J_5663185	Gm43048	ENSEMBL:ENSMUSG00000105828	MGI:5663185	unclassified gene	predicted gene 43048
5	gene	49.21968	49.22216	negative	MGI_C57BL6J_5662908	Gm42771	ENSEMBL:ENSMUSG00000106579	MGI:5662908	unclassified gene	predicted gene 42771
5	gene	49.40879	49.41183	negative	MGI_C57BL6J_5662909	Gm42772	ENSEMBL:ENSMUSG00000105700	MGI:5662909	unclassified gene	predicted gene 42772
5	pseudogene	49.41114	49.42430	positive	MGI_C57BL6J_5012117	Gm19932	NCBI_Gene:108169120,ENSEMBL:ENSMUSG00000093490	MGI:5012117	pseudogene	predicted gene, 19932
5	gene	49.42502	49.42678	positive	MGI_C57BL6J_5663807	Gm43670	ENSEMBL:ENSMUSG00000106539	MGI:5663807	unclassified gene	predicted gene 43670
5	gene	49.51582	49.51894	negative	MGI_C57BL6J_1920226	2900064K03Rik	ENSEMBL:ENSMUSG00000105771	MGI:1920226	unclassified gene	RIKEN cDNA 2900064K03 gene
5	pseudogene	49.55216	49.55347	positive	MGI_C57BL6J_3648970	Gm5555	NCBI_Gene:433885,ENSEMBL:ENSMUSG00000083477	MGI:3648970	pseudogene	predicted pseudogene 5555
5	gene	49.60346	49.61526	positive	MGI_C57BL6J_5623184	Gm40299	NCBI_Gene:105244743	MGI:5623184	lncRNA gene	predicted gene, 40299
5	pseudogene	49.90001	49.90230	negative	MGI_C57BL6J_3649096	Gm7988	NCBI_Gene:666223,ENSEMBL:ENSMUSG00000105540	MGI:3649096	pseudogene	predicted gene 7988
5	gene	49.94341	49.94456	negative	MGI_C57BL6J_5662598	Gm42461	ENSEMBL:ENSMUSG00000104634	MGI:5662598	unclassified gene	predicted gene 42461
5	gene	49.95995	50.05901	negative	MGI_C57BL6J_1917943	Adgra3	NCBI_Gene:70693,ENSEMBL:ENSMUSG00000029090	MGI:1917943	protein coding gene	adhesion G protein-coupled receptor A3
5	gene	50.05910	50.06166	positive	MGI_C57BL6J_5662597	Gm42460	ENSEMBL:ENSMUSG00000106430	MGI:5662597	unclassified gene	predicted gene 42460
5	gene	50.06117	50.07326	negative	MGI_C57BL6J_5595861	Gm36702	NCBI_Gene:102640694	MGI:5595861	lncRNA gene	predicted gene, 36702
5	gene	50.12271	50.12635	negative	MGI_C57BL6J_5623185	Gm40300	NCBI_Gene:105244744	MGI:5623185	lncRNA gene	predicted gene, 40300
5	gene	50.15133	50.15610	positive	MGI_C57BL6J_1921215	4930448I18Rik	NCBI_Gene:73965,ENSEMBL:ENSMUSG00000104870	MGI:1921215	lncRNA gene	RIKEN cDNA 4930448I18 gene
5	pseudogene	50.21725	50.39136	positive	MGI_C57BL6J_3643966	Gm7205	NCBI_Gene:637307,ENSEMBL:ENSMUSG00000105020	MGI:3643966	pseudogene	predicted gene 7205
5	gene	50.25276	50.25287	positive	MGI_C57BL6J_5530705	Mir8117	miRBase:MI0026049,NCBI_Gene:102465903,ENSEMBL:ENSMUSG00000099124	MGI:5530705	miRNA gene	microRNA 8117
5	gene	50.27715	50.28225	positive	MGI_C57BL6J_5623186	Gm40301	NCBI_Gene:105244745	MGI:5623186	lncRNA gene	predicted gene, 40301
5	gene	50.29038	50.29049	negative	MGI_C57BL6J_5452395	Gm22618	ENSEMBL:ENSMUSG00000095857	MGI:5452395	snRNA gene	predicted gene, 22618
5	gene	50.40214	50.41033	positive	MGI_C57BL6J_5595919	Gm36760	NCBI_Gene:102640770	MGI:5595919	lncRNA gene	predicted gene, 36760
5	gene	50.42544	50.42562	positive	MGI_C57BL6J_107677	Srst	NA	NA	lncRNA gene	simple repeat sequence-containing transcript
5	gene	50.44866	50.54449	negative	MGI_C57BL6J_5595973	Gm36814	NCBI_Gene:102640843,ENSEMBL:ENSMUSG00000105423	MGI:5595973	lncRNA gene	predicted gene, 36814
5	pseudogene	50.51747	50.51821	positive	MGI_C57BL6J_5662596	Gm42459	ENSEMBL:ENSMUSG00000106345	MGI:5662596	pseudogene	predicted gene 42459
5	gene	50.54364	50.68922	positive	MGI_C57BL6J_5663153	Gm43016	ENSEMBL:ENSMUSG00000105320	MGI:5663153	lncRNA gene	predicted gene 43016
5	pseudogene	50.67972	50.68269	positive	MGI_C57BL6J_3643111	Gm4962	NCBI_Gene:242987,ENSEMBL:ENSMUSG00000106038	MGI:3643111	pseudogene	predicted gene 4962
5	gene	50.83832	50.84076	positive	MGI_C57BL6J_5663151	Gm43014	ENSEMBL:ENSMUSG00000105931	MGI:5663151	unclassified gene	predicted gene 43014
5	pseudogene	50.92134	50.92191	positive	MGI_C57BL6J_5663152	Gm43015	ENSEMBL:ENSMUSG00000105273	MGI:5663152	pseudogene	predicted gene 43015
5	pseudogene	51.05238	51.05286	positive	MGI_C57BL6J_5623204	Gm40319	NCBI_Gene:105244767,ENSEMBL:ENSMUSG00000106267	MGI:5623204	pseudogene	predicted gene, 40319
5	gene	51.22359	51.22367	negative	MGI_C57BL6J_5690769	Gm44377	ENSEMBL:ENSMUSG00000104635	MGI:5690769	miRNA gene	predicted gene, 44377
5	gene	51.28381	51.28933	negative	MGI_C57BL6J_5589083	Gm29924	NCBI_Gene:102631632	MGI:5589083	lncRNA gene	predicted gene, 29924
5	gene	51.45425	52.11606	negative	MGI_C57BL6J_1342774	Ppargc1a	NCBI_Gene:19017,ENSEMBL:ENSMUSG00000029167	MGI:1342774	protein coding gene	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
5	gene	51.48275	51.48430	negative	MGI_C57BL6J_5662751	Gm42614	ENSEMBL:ENSMUSG00000105442	MGI:5662751	unclassified gene	predicted gene 42614
5	gene	51.49110	51.49292	negative	MGI_C57BL6J_5662752	Gm42615	ENSEMBL:ENSMUSG00000105622	MGI:5662752	unclassified gene	predicted gene 42615
5	gene	51.49953	51.50146	positive	MGI_C57BL6J_5662750	Gm42613	ENSEMBL:ENSMUSG00000106575	MGI:5662750	unclassified gene	predicted gene 42613
5	gene	51.51087	51.51429	negative	MGI_C57BL6J_5663742	Gm43605	ENSEMBL:ENSMUSG00000105762	MGI:5663742	unclassified gene	predicted gene 43605
5	gene	51.85522	51.85878	negative	MGI_C57BL6J_5663743	Gm43606	ENSEMBL:ENSMUSG00000105663	MGI:5663743	unclassified gene	predicted gene 43606
5	gene	51.87542	51.87960	negative	MGI_C57BL6J_5662753	Gm42616	ENSEMBL:ENSMUSG00000106010	MGI:5662753	unclassified gene	predicted gene 42616
5	gene	51.89199	51.89321	negative	MGI_C57BL6J_5662754	Gm42617	ENSEMBL:ENSMUSG00000104919	MGI:5662754	unclassified gene	predicted gene 42617
5	gene	51.90712	51.91093	negative	MGI_C57BL6J_5663312	Gm43175	ENSEMBL:ENSMUSG00000105942	MGI:5663312	unclassified gene	predicted gene 43175
5	gene	52.07989	52.08233	negative	MGI_C57BL6J_5663311	Gm43174	ENSEMBL:ENSMUSG00000106292	MGI:5663311	unclassified gene	predicted gene 43174
5	gene	52.11731	52.11852	positive	MGI_C57BL6J_5663314	Gm43177	ENSEMBL:ENSMUSG00000104847	MGI:5663314	lncRNA gene	predicted gene 43177
5	gene	52.12882	52.13887	positive	MGI_C57BL6J_5623187	Gm40302	NCBI_Gene:105244746	MGI:5623187	lncRNA gene	predicted gene, 40302
5	gene	52.13590	52.13602	negative	MGI_C57BL6J_5530716	Mir6417	miRBase:MI0021955,NCBI_Gene:102466648,ENSEMBL:ENSMUSG00000098726	MGI:5530716	miRNA gene	microRNA 6417
5	gene	52.13958	52.14257	negative	MGI_C57BL6J_5663313	Gm43176	ENSEMBL:ENSMUSG00000106648	MGI:5663313	unclassified gene	predicted gene 43176
5	gene	52.15020	52.19055	negative	MGI_C57BL6J_1099786	Dhx15	NCBI_Gene:13204,ENSEMBL:ENSMUSG00000029169	MGI:1099786	protein coding gene	DEAH (Asp-Glu-Ala-His) box polypeptide 15
5	gene	52.17437	52.17576	negative	MGI_C57BL6J_5663315	Gm43178	ENSEMBL:ENSMUSG00000106607	MGI:5663315	unclassified gene	predicted gene 43178
5	gene	52.19067	52.27903	positive	MGI_C57BL6J_3041212	9230114K14Rik	NCBI_Gene:414108,ENSEMBL:ENSMUSG00000097145	MGI:3041212	lncRNA gene	RIKEN cDNA 9230114K14 gene
5	gene	52.19998	52.21643	negative	MGI_C57BL6J_3041216	C130083M11Rik	NCBI_Gene:414111,ENSEMBL:ENSMUSG00000106464	MGI:3041216	lncRNA gene	RIKEN cDNA C130083M11 gene
5	gene	52.23934	52.24222	positive	MGI_C57BL6J_5663317	Gm43180	ENSEMBL:ENSMUSG00000105328	MGI:5663317	unclassified gene	predicted gene 43180
5	gene	52.34209	52.34236	negative	MGI_C57BL6J_5663316	Gm43179	ENSEMBL:ENSMUSG00000104751	MGI:5663316	lncRNA gene	predicted gene 43179
5	gene	52.34312	52.34322	negative	MGI_C57BL6J_5455378	Gm25601	ENSEMBL:ENSMUSG00000088981	MGI:5455378	snRNA gene	predicted gene, 25601
5	gene	52.36379	52.37142	positive	MGI_C57BL6J_103181	Sod3	NCBI_Gene:20657,ENSEMBL:ENSMUSG00000072941	MGI:103181	protein coding gene	superoxide dismutase 3, extracellular
5	gene	52.37465	52.47155	negative	MGI_C57BL6J_2685293	Ccdc149	NCBI_Gene:100503884,ENSEMBL:ENSMUSG00000045790	MGI:2685293	protein coding gene	coiled-coil domain containing 149
5	gene	52.44068	52.44325	positive	MGI_C57BL6J_3781696	Gm3519	NCBI_Gene:100041805,ENSEMBL:ENSMUSG00000106380	MGI:3781696	lncRNA gene	predicted gene 3519
5	gene	52.53352	52.56646	negative	MGI_C57BL6J_2180196	Lgi2	NCBI_Gene:246316,ENSEMBL:ENSMUSG00000039252	MGI:2180196	protein coding gene	leucine-rich repeat LGI family, member 2
5	gene	52.53883	52.54008	positive	MGI_C57BL6J_5663822	Gm43685	ENSEMBL:ENSMUSG00000104829	MGI:5663822	lncRNA gene	predicted gene 43685
5	gene	52.54291	52.54534	negative	MGI_C57BL6J_5663823	Gm43686	ENSEMBL:ENSMUSG00000104974	MGI:5663823	unclassified gene	predicted gene 43686
5	pseudogene	52.58203	52.58309	positive	MGI_C57BL6J_3645339	Gm5866	NCBI_Gene:545750,ENSEMBL:ENSMUSG00000095078	MGI:3645339	pseudogene	predicted gene 5866
5	gene	52.60755	52.61901	negative	MGI_C57BL6J_2443206	8030423F21Rik	NCBI_Gene:211001,ENSEMBL:ENSMUSG00000052295	MGI:2443206	lncRNA gene	RIKEN cDNA 8030423F21 gene
5	gene	52.62230	52.62349	negative	MGI_C57BL6J_5589337	Gm30178	NCBI_Gene:102631991	MGI:5589337	lncRNA gene	predicted gene, 30178
5	gene	52.64009	52.66977	negative	MGI_C57BL6J_1098791	Sepsecs	NCBI_Gene:211006,ENSEMBL:ENSMUSG00000029173	MGI:1098791	protein coding gene	Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
5	gene	52.74156	52.76934	positive	MGI_C57BL6J_1914323	Pi4k2b	NCBI_Gene:67073,ENSEMBL:ENSMUSG00000029186	MGI:1914323	protein coding gene	phosphatidylinositol 4-kinase type 2 beta
5	gene	52.77541	52.82467	positive	MGI_C57BL6J_1926046	Zcchc4	NCBI_Gene:78796,ENSEMBL:ENSMUSG00000029179	MGI:1926046	protein coding gene	zinc finger, CCHC domain containing 4
5	gene	52.83401	52.86780	positive	MGI_C57BL6J_1098673	Anapc4	NCBI_Gene:52206,ENSEMBL:ENSMUSG00000029176	MGI:1098673	protein coding gene	anaphase promoting complex subunit 4
5	gene	52.88482	52.88678	positive	MGI_C57BL6J_5589400	Gm30241	NCBI_Gene:102632071	MGI:5589400	lncRNA gene	predicted gene, 30241
5	pseudogene	52.91762	52.91921	negative	MGI_C57BL6J_5663801	Gm43664	ENSEMBL:ENSMUSG00000105054	MGI:5663801	pseudogene	predicted gene 43664
5	gene	52.95935	52.95946	negative	MGI_C57BL6J_5453309	Gm23532	ENSEMBL:ENSMUSG00000077757	MGI:5453309	snoRNA gene	predicted gene, 23532
5	gene	52.97301	52.99444	negative	MGI_C57BL6J_1923204	5033403H07Rik	NCBI_Gene:75954,ENSEMBL:ENSMUSG00000106352	MGI:1923204	lncRNA gene	RIKEN cDNA 5033403H07 gene
5	gene	52.97327	52.99615	positive	MGI_C57BL6J_5589460	Gm30301	NCBI_Gene:102632151,ENSEMBL:ENSMUSG00000106538	MGI:5589460	lncRNA gene	predicted gene, 30301
5	gene	53.03808	53.07166	positive	MGI_C57BL6J_1342284	Slc34a2	NCBI_Gene:20531,ENSEMBL:ENSMUSG00000029188	MGI:1342284	protein coding gene	solute carrier family 34 (sodium phosphate), member 2
5	gene	53.04769	53.04919	negative	MGI_C57BL6J_4938009	Gm17182	NCBI_Gene:102632222,ENSEMBL:ENSMUSG00000090642	MGI:4938009	lncRNA gene	predicted gene 17182
5	gene	53.10708	53.21393	negative	MGI_C57BL6J_1916941	Sel1l3	NCBI_Gene:231238,ENSEMBL:ENSMUSG00000029189	MGI:1916941	protein coding gene	sel-1 suppressor of lin-12-like 3 (C. elegans)
5	gene	53.14316	53.14324	positive	MGI_C57BL6J_4422036	n-R5s171	ENSEMBL:ENSMUSG00000077316	MGI:4422036	rRNA gene	nuclear encoded rRNA 5S 171
5	gene	53.22096	53.23850	positive	MGI_C57BL6J_5589623	Gm30464	NCBI_Gene:102632375	MGI:5589623	lncRNA gene	predicted gene, 30464
5	gene	53.23954	53.24691	negative	MGI_C57BL6J_5589678	Gm30519	NCBI_Gene:102632451	MGI:5589678	lncRNA gene	predicted gene, 30519
5	gene	53.26418	53.26702	negative	MGI_C57BL6J_5623188	Gm40303	NCBI_Gene:105244747	MGI:5623188	lncRNA gene	predicted gene, 40303
5	gene	53.26708	53.27854	positive	MGI_C57BL6J_1913528	Smim20	NCBI_Gene:66278,ENSEMBL:ENSMUSG00000061461	MGI:1913528	protein coding gene	small integral membrane protein 20
5	gene	53.28181	53.28351	positive	MGI_C57BL6J_5791331	Gm45495	ENSEMBL:ENSMUSG00000106981	MGI:5791331	lncRNA gene	predicted gene 45495
5	gene	53.34626	53.34637	negative	MGI_C57BL6J_4422037	n-R5s172	ENSEMBL:ENSMUSG00000077696	MGI:4422037	rRNA gene	nuclear encoded rRNA 5S 172
5	gene	53.36066	53.37177	negative	MGI_C57BL6J_5662882	Gm42745	ENSEMBL:ENSMUSG00000106808	MGI:5662882	lncRNA gene	predicted gene 42745
5	gene	53.41857	53.41868	positive	MGI_C57BL6J_5456263	Gm26486	ENSEMBL:ENSMUSG00000088646	MGI:5456263	rRNA gene	predicted gene, 26486
5	gene	53.46612	53.65745	positive	MGI_C57BL6J_96522	Rbpj	NCBI_Gene:19664,ENSEMBL:ENSMUSG00000039191	MGI:96522	protein coding gene	recombination signal binding protein for immunoglobulin kappa J region
5	gene	53.51926	53.52273	negative	MGI_C57BL6J_3641801	Gm10441	ENSEMBL:ENSMUSG00000106807	MGI:3641801	lncRNA gene	predicted gene 10441
5	gene	53.54618	53.54732	negative	MGI_C57BL6J_5623189	Gm40304	NCBI_Gene:105244748,ENSEMBL:ENSMUSG00000107111	MGI:5623189	lncRNA gene	predicted gene, 40304
5	gene	53.69778	53.70777	negative	MGI_C57BL6J_99478	Cckar	NCBI_Gene:12425,ENSEMBL:ENSMUSG00000029193	MGI:99478	protein coding gene	cholecystokinin A receptor
5	gene	53.80959	53.90922	positive	MGI_C57BL6J_1914499	Tbc1d19	NCBI_Gene:67249,ENSEMBL:ENSMUSG00000039178	MGI:1914499	protein coding gene	TBC1 domain family, member 19
5	gene	53.90516	53.90922	positive	MGI_C57BL6J_5663405	Gm43268	ENSEMBL:ENSMUSG00000107182	MGI:5663405	unclassified gene	predicted gene 43268
5	gene	53.91844	53.92021	positive	MGI_C57BL6J_5663403	Gm43266	ENSEMBL:ENSMUSG00000107173	MGI:5663403	unclassified gene	predicted gene 43266
5	gene	53.92758	53.95099	positive	MGI_C57BL6J_5623190	Gm40305	NCBI_Gene:105244749	MGI:5623190	lncRNA gene	predicted gene, 40305
5	gene	53.99522	53.99661	positive	MGI_C57BL6J_5589760	Gm30601	NCBI_Gene:102632559	MGI:5589760	lncRNA gene	predicted gene, 30601
5	gene	53.99844	54.12106	positive	MGI_C57BL6J_2151156	Stim2	NCBI_Gene:116873,ENSEMBL:ENSMUSG00000039156	MGI:2151156	protein coding gene	stromal interaction molecule 2
5	pseudogene	54.09400	54.09508	negative	MGI_C57BL6J_3801941	Gm15820	ENSEMBL:ENSMUSG00000107105	MGI:3801941	pseudogene	predicted gene 15820
5	gene	54.34999	54.35854	positive	MGI_C57BL6J_3641803	Gm10440	NCBI_Gene:330086,ENSEMBL:ENSMUSG00000105912	MGI:3641803	lncRNA gene	predicted gene 10440
5	pseudogene	54.56990	54.57807	positive	MGI_C57BL6J_5010636	Gm18451	NCBI_Gene:100417207,ENSEMBL:ENSMUSG00000106529	MGI:5010636	pseudogene	predicted gene, 18451
5	pseudogene	54.65156	54.65219	negative	MGI_C57BL6J_3645115	Gm8069	NCBI_Gene:666377,ENSEMBL:ENSMUSG00000105143	MGI:3645115	pseudogene	predicted pseudogene 8069
5	gene	54.80733	54.81001	positive	MGI_C57BL6J_5663918	Gm43781	ENSEMBL:ENSMUSG00000106126	MGI:5663918	unclassified gene	predicted gene 43781
5	gene	54.82722	54.82734	positive	MGI_C57BL6J_5454012	Gm24235	ENSEMBL:ENSMUSG00000077507	MGI:5454012	snoRNA gene	predicted gene, 24235
5	pseudogene	54.99662	54.99745	positive	MGI_C57BL6J_5663916	Gm43779	ENSEMBL:ENSMUSG00000106113	MGI:5663916	pseudogene	predicted gene 43779
5	gene	55.30342	55.30358	negative	MGI_C57BL6J_5455290	Gm25513	ENSEMBL:ENSMUSG00000065795	MGI:5455290	snRNA gene	predicted gene, 25513
5	gene	55.50353	55.50713	positive	MGI_C57BL6J_5663917	Gm43780	ENSEMBL:ENSMUSG00000105702	MGI:5663917	unclassified gene	predicted gene 43780
5	pseudogene	55.58364	55.58435	negative	MGI_C57BL6J_5663533	Gm43396	ENSEMBL:ENSMUSG00000105384	MGI:5663533	pseudogene	predicted gene 43396
5	pseudogene	55.58449	55.58480	positive	MGI_C57BL6J_5663336	Gm43199	ENSEMBL:ENSMUSG00000105551	MGI:5663336	pseudogene	predicted gene 43199
5	pseudogene	55.62403	55.62578	positive	MGI_C57BL6J_3801944	Gm15975	NCBI_Gene:100417530,ENSEMBL:ENSMUSG00000083902	MGI:3801944	pseudogene	predicted gene 15975
5	gene	55.65295	55.65315	positive	MGI_C57BL6J_5663915	Gm43778	ENSEMBL:ENSMUSG00000105186	MGI:5663915	unclassified gene	predicted gene 43778
5	pseudogene	55.72254	55.79571	negative	MGI_C57BL6J_5012408	Gm20223	NCBI_Gene:100504431,ENSEMBL:ENSMUSG00000106335	MGI:5012408	pseudogene	predicted gene, 20223
5	gene	55.78917	55.79289	negative	MGI_C57BL6J_5663842	Gm43705	ENSEMBL:ENSMUSG00000105678	MGI:5663842	unclassified gene	predicted gene 43705
5	gene	55.80322	55.82109	negative	MGI_C57BL6J_5589937	Gm30778	NCBI_Gene:102632800	MGI:5589937	lncRNA gene	predicted gene, 30778
5	pseudogene	56.15734	56.15765	positive	MGI_C57BL6J_5663452	Gm43315	ENSEMBL:ENSMUSG00000105685	MGI:5663452	pseudogene	predicted gene 43315
5	pseudogene	56.41421	56.49023	positive	MGI_C57BL6J_5663114	Gm42977	ENSEMBL:ENSMUSG00000106326	MGI:5663114	pseudogene	predicted gene 42977
5	gene	56.59511	56.59594	positive	MGI_C57BL6J_1925020	A930008L05Rik	NA	NA	unclassified gene	RIKEN cDNA A930008L05 gene
5	gene	56.73609	56.73622	positive	MGI_C57BL6J_5453673	Gm23896	ENSEMBL:ENSMUSG00000088734	MGI:5453673	snoRNA gene	predicted gene, 23896
5	gene	57.11082	57.11095	positive	MGI_C57BL6J_5454679	Gm24902	ENSEMBL:ENSMUSG00000088751	MGI:5454679	snoRNA gene	predicted gene, 24902
5	gene	57.12864	57.12877	negative	MGI_C57BL6J_5452792	Gm23015	ENSEMBL:ENSMUSG00000077333	MGI:5452792	snoRNA gene	predicted gene, 23015
5	pseudogene	57.22923	57.23065	positive	MGI_C57BL6J_3781461	Gm3283	NCBI_Gene:100041349,ENSEMBL:ENSMUSG00000104739	MGI:3781461	pseudogene	predicted gene 3283
5	pseudogene	57.26127	57.26201	positive	MGI_C57BL6J_3648794	Gm8115	NCBI_Gene:666455,ENSEMBL:ENSMUSG00000104560	MGI:3648794	pseudogene	predicted gene 8115
5	pseudogene	57.35583	57.35728	positive	MGI_C57BL6J_5011086	Gm18901	NCBI_Gene:100417925,ENSEMBL:ENSMUSG00000105291	MGI:5011086	pseudogene	predicted gene, 18901
5	gene	57.45163	57.45428	positive	MGI_C57BL6J_5663843	Gm43706	ENSEMBL:ENSMUSG00000105693	MGI:5663843	unclassified gene	predicted gene 43706
5	pseudogene	57.46016	57.46079	positive	MGI_C57BL6J_3644221	Gm6615	NCBI_Gene:625721,ENSEMBL:ENSMUSG00000104892	MGI:3644221	pseudogene	predicted gene 6615
5	gene	57.57008	57.72020	negative	MGI_C57BL6J_2441691	4932441J04Rik	NCBI_Gene:319216,ENSEMBL:ENSMUSG00000097216	MGI:2441691	lncRNA gene	RIKEN cDNA 4932441J04 gene
5	pseudogene	57.60838	57.60915	positive	MGI_C57BL6J_3645325	Gm8121	NCBI_Gene:666465,ENSEMBL:ENSMUSG00000051116	MGI:3645325	pseudogene	predicted pseudogene 8121
5	gene	57.61784	57.61800	positive	MGI_C57BL6J_5663139	Gm43002	ENSEMBL:ENSMUSG00000104924	MGI:5663139	unclassified gene	predicted gene 43002
5	gene	57.69600	57.69638	negative	MGI_C57BL6J_5662771	Gm42634	ENSEMBL:ENSMUSG00000106517	MGI:5662771	unclassified gene	predicted gene 42634
5	gene	57.71760	58.13324	positive	MGI_C57BL6J_1860487	Pcdh7	NCBI_Gene:54216,ENSEMBL:ENSMUSG00000029108	MGI:1860487	protein coding gene	protocadherin 7
5	gene	57.72439	57.72696	positive	MGI_C57BL6J_5662772	Gm42635	ENSEMBL:ENSMUSG00000105940	MGI:5662772	unclassified gene	predicted gene 42635
5	gene	57.77887	57.78105	positive	MGI_C57BL6J_5662618	Gm42481	ENSEMBL:ENSMUSG00000104821	MGI:5662618	unclassified gene	predicted gene 42481
5	gene	57.79316	57.79575	positive	MGI_C57BL6J_5662617	Gm42480	ENSEMBL:ENSMUSG00000105637	MGI:5662617	unclassified gene	predicted gene 42480
5	gene	57.79850	57.80045	positive	MGI_C57BL6J_5662619	Gm42482	ENSEMBL:ENSMUSG00000105050	MGI:5662619	unclassified gene	predicted gene 42482
5	pseudogene	57.89971	57.90038	positive	MGI_C57BL6J_5010162	Gm17977	NCBI_Gene:100416221,ENSEMBL:ENSMUSG00000104564	MGI:5010162	pseudogene	predicted gene, 17977
5	gene	57.90464	57.90735	positive	MGI_C57BL6J_5663852	Gm43715	ENSEMBL:ENSMUSG00000105079	MGI:5663852	unclassified gene	predicted gene 43715
5	gene	57.92562	57.92697	positive	MGI_C57BL6J_5662616	Gm42479	ENSEMBL:ENSMUSG00000105877	MGI:5662616	unclassified gene	predicted gene 42479
5	gene	57.92975	57.93122	positive	MGI_C57BL6J_5662615	Gm42478	ENSEMBL:ENSMUSG00000106337	MGI:5662615	unclassified gene	predicted gene 42478
5	gene	57.94504	57.94691	positive	MGI_C57BL6J_5662776	Gm42639	ENSEMBL:ENSMUSG00000104871	MGI:5662776	unclassified gene	predicted gene 42639
5	gene	57.96159	57.96279	positive	MGI_C57BL6J_5662777	Gm42640	ENSEMBL:ENSMUSG00000105431	MGI:5662777	unclassified gene	predicted gene 42640
5	gene	57.96541	57.96752	positive	MGI_C57BL6J_5662621	Gm42484	ENSEMBL:ENSMUSG00000104709	MGI:5662621	unclassified gene	predicted gene 42484
5	gene	57.98421	57.98545	positive	MGI_C57BL6J_5610948	Gm37720	ENSEMBL:ENSMUSG00000103959	MGI:5610948	sense intronic lncRNA gene	predicted gene, 37720
5	gene	58.04733	58.04907	positive	MGI_C57BL6J_5662620	Gm42483	ENSEMBL:ENSMUSG00000106646	MGI:5662620	unclassified gene	predicted gene 42483
5	gene	58.12144	58.12492	positive	MGI_C57BL6J_5662623	Gm42486	ENSEMBL:ENSMUSG00000105049	MGI:5662623	unclassified gene	predicted gene 42486
5	pseudogene	58.14962	58.14984	negative	MGI_C57BL6J_5663113	Gm42976	ENSEMBL:ENSMUSG00000105525	MGI:5663113	pseudogene	predicted gene 42976
5	gene	58.17343	58.17553	negative	MGI_C57BL6J_5663182	Gm43045	ENSEMBL:ENSMUSG00000106146	MGI:5663182	unclassified gene	predicted gene 43045
5	pseudogene	58.32009	58.32351	negative	MGI_C57BL6J_5826569	Gm46932	NCBI_Gene:108169094	MGI:5826569	pseudogene	predicted gene, 46932
5	pseudogene	58.36163	58.36351	positive	MGI_C57BL6J_5663136	Gm42999	ENSEMBL:ENSMUSG00000105269	MGI:5663136	pseudogene	predicted gene 42999
5	gene	58.41423	58.41436	positive	MGI_C57BL6J_5452313	Gm22536	ENSEMBL:ENSMUSG00000088796	MGI:5452313	snoRNA gene	predicted gene, 22536
5	gene	58.44324	58.45300	negative	MGI_C57BL6J_1925413	4930459L07Rik	NCBI_Gene:78163,ENSEMBL:ENSMUSG00000105234	MGI:1925413	lncRNA gene	RIKEN cDNA 4930459L07 gene
5	gene	58.45304	58.45529	positive	MGI_C57BL6J_1919500	1700029E06Rik	ENSEMBL:ENSMUSG00000100557	MGI:1919500	lncRNA gene	RIKEN cDNA 1700029E06 gene
5	gene	58.79012	58.79684	positive	MGI_C57BL6J_5623191	Gm40306	NCBI_Gene:105244751	MGI:5623191	lncRNA gene	predicted gene, 40306
5	pseudogene	59.00030	59.00099	negative	MGI_C57BL6J_5663531	Gm43394	ENSEMBL:ENSMUSG00000106509	MGI:5663531	pseudogene	predicted gene 43394
5	pseudogene	59.05360	59.05458	positive	MGI_C57BL6J_3644251	Gm6632	NCBI_Gene:625870,ENSEMBL:ENSMUSG00000094696	MGI:3644251	pseudogene	predicted pseudogene 6632
5	gene	59.07944	59.08168	positive	MGI_C57BL6J_5663532	Gm43395	ENSEMBL:ENSMUSG00000106467	MGI:5663532	unclassified gene	predicted gene 43395
5	gene	59.21495	59.21505	negative	MGI_C57BL6J_5452085	Gm22308	ENSEMBL:ENSMUSG00000096124	MGI:5452085	snRNA gene	predicted gene, 22308
5	pseudogene	59.51196	59.51234	positive	MGI_C57BL6J_5663181	Gm43044	NCBI_Gene:108169108,ENSEMBL:ENSMUSG00000105038	MGI:5663181	pseudogene	predicted gene 43044
5	gene	59.56970	59.57424	negative	MGI_C57BL6J_5663179	Gm43042	ENSEMBL:ENSMUSG00000106634	MGI:5663179	lncRNA gene	predicted gene 43042
5	pseudogene	59.77791	59.77832	positive	MGI_C57BL6J_5663180	Gm43043	ENSEMBL:ENSMUSG00000104889	MGI:5663180	pseudogene	predicted gene 43043
5	gene	59.95351	59.95614	negative	MGI_C57BL6J_5663178	Gm43041	ENSEMBL:ENSMUSG00000104563	MGI:5663178	unclassified gene	predicted gene 43041
5	gene	59.96312	59.98600	negative	MGI_C57BL6J_1918307	4933402J10Rik	NCBI_Gene:71057,ENSEMBL:ENSMUSG00000106013	MGI:1918307	lncRNA gene	RIKEN cDNA 4933402J10 gene
5	gene	59.99694	59.99956	negative	MGI_C57BL6J_5662999	Gm42862	ENSEMBL:ENSMUSG00000105158	MGI:5662999	unclassified gene	predicted gene 42862
5	pseudogene	60.02490	60.02533	negative	MGI_C57BL6J_5663529	Gm43392	ENSEMBL:ENSMUSG00000106250	MGI:5663529	pseudogene	predicted gene 43392
5	pseudogene	60.02569	60.02588	negative	MGI_C57BL6J_5663530	Gm43393	ENSEMBL:ENSMUSG00000106170	MGI:5663530	pseudogene	predicted gene 43393
5	pseudogene	60.17592	60.17655	negative	MGI_C57BL6J_5662998	Gm42861	ENSEMBL:ENSMUSG00000106042	MGI:5662998	pseudogene	predicted gene 42861
5	pseudogene	60.23138	60.23221	positive	MGI_C57BL6J_1333788	Cbfa2t2-ps1	NCBI_Gene:12397,ENSEMBL:ENSMUSG00000087034	MGI:1333788	pseudogene	CBFA2/RUNX1 translocation partner 2, pseudogene 1
5	gene	60.50083	60.50094	negative	MGI_C57BL6J_5453108	Gm23331	ENSEMBL:ENSMUSG00000088048	MGI:5453108	snRNA gene	predicted gene, 23331
5	pseudogene	60.57863	60.57905	positive	MGI_C57BL6J_5663527	Gm43390	ENSEMBL:ENSMUSG00000106548	MGI:5663527	pseudogene	predicted gene 43390
5	pseudogene	60.67429	60.67611	positive	MGI_C57BL6J_3781550	Gm3372	NCBI_Gene:100041498,ENSEMBL:ENSMUSG00000105486	MGI:3781550	pseudogene	predicted gene 3372
5	gene	60.71732	60.71744	negative	MGI_C57BL6J_5453485	Gm23708	ENSEMBL:ENSMUSG00000077555	MGI:5453485	snoRNA gene	predicted gene, 23708
5	gene	60.80372	60.80771	negative	MGI_C57BL6J_5662997	Gm42860	ENSEMBL:ENSMUSG00000106044	MGI:5662997	unclassified gene	predicted gene 42860
5	pseudogene	60.82162	60.82247	negative	MGI_C57BL6J_3643331	Gm8182	NCBI_Gene:666597,ENSEMBL:ENSMUSG00000104775	MGI:3643331	pseudogene	predicted gene 8182
5	gene	60.94094	60.94565	negative	MGI_C57BL6J_1924172	1700014F14Rik	ENSEMBL:ENSMUSG00000105903	MGI:1924172	lncRNA gene	RIKEN cDNA 1700014F14 gene
5	gene	60.98073	60.99479	negative	MGI_C57BL6J_5623192	Gm40307	NCBI_Gene:105244752	MGI:5623192	lncRNA gene	predicted gene, 40307
5	pseudogene	61.33790	61.33873	negative	MGI_C57BL6J_5663519	Gm43382	ENSEMBL:ENSMUSG00000106370	MGI:5663519	pseudogene	predicted gene 43382
5	pseudogene	61.60257	61.60304	negative	MGI_C57BL6J_5663520	Gm43383	ENSEMBL:ENSMUSG00000105675	MGI:5663520	pseudogene	predicted gene 43383
5	pseudogene	61.71703	61.71767	negative	MGI_C57BL6J_5663521	Gm43384	ENSEMBL:ENSMUSG00000105573	MGI:5663521	pseudogene	predicted gene 43384
5	gene	61.76426	61.77418	negative	MGI_C57BL6J_5623193	Gm40308	NCBI_Gene:105244753	MGI:5623193	lncRNA gene	predicted gene, 40308
5	gene	61.80882	61.81116	positive	MGI_C57BL6J_105977	G6pd2	NCBI_Gene:14380,ENSEMBL:ENSMUSG00000089992	MGI:105977	protein coding gene	glucose-6-phosphate dehydrogenase 2
5	pseudogene	62.00422	62.00483	positive	MGI_C57BL6J_5662567	Gm42430	ENSEMBL:ENSMUSG00000106530	MGI:5662567	pseudogene	predicted gene 42430
5	pseudogene	62.00928	62.01001	positive	MGI_C57BL6J_5010529	Gm18344	NCBI_Gene:100416975	MGI:5010529	pseudogene	predicted gene, 18344
5	gene	62.13235	62.13248	negative	MGI_C57BL6J_5452050	Gm22273	ENSEMBL:ENSMUSG00000077228	MGI:5452050	snoRNA gene	predicted gene, 22273
5	gene	62.42872	62.42908	positive	MGI_C57BL6J_5663375	Gm43238	ENSEMBL:ENSMUSG00000105285	MGI:5663375	unclassified gene	predicted gene 43238
5	gene	62.52341	62.52354	negative	MGI_C57BL6J_5453856	Gm24079	ENSEMBL:ENSMUSG00000094239	MGI:5453856	snoRNA gene	predicted gene, 24079
5	gene	62.60245	62.76618	negative	MGI_C57BL6J_2684416	Arap2	NCBI_Gene:212285,ENSEMBL:ENSMUSG00000037999	MGI:2684416	protein coding gene	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
5	gene	62.61241	62.61346	negative	MGI_C57BL6J_5663374	Gm43237	ENSEMBL:ENSMUSG00000105694	MGI:5663374	unclassified gene	predicted gene 43237
5	gene	62.65680	62.66011	negative	MGI_C57BL6J_5663890	Gm43753	ENSEMBL:ENSMUSG00000105707	MGI:5663890	unclassified gene	predicted gene 43753
5	gene	62.81167	62.88832	positive	MGI_C57BL6J_4937018	Dthd1	NCBI_Gene:100322896,ENSEMBL:ENSMUSG00000090326	MGI:4937018	protein coding gene	death domain containing 1
5	gene	63.56198	63.62422	negative	MGI_C57BL6J_5589996	Gm30837	NCBI_Gene:102632875	MGI:5589996	lncRNA gene	predicted gene, 30837
5	gene	63.64617	63.65089	negative	MGI_C57BL6J_3642120	Gm9954	ENSEMBL:ENSMUSG00000104868	MGI:3642120	protein coding gene	predicted gene 9954
5	gene	63.64910	63.81055	positive	MGI_C57BL6J_1920464	Nwd2	NCBI_Gene:319807,ENSEMBL:ENSMUSG00000090061	MGI:1920464	protein coding gene	NACHT and WD repeat domain containing 2
5	pseudogene	63.69052	63.69489	positive	MGI_C57BL6J_3781863	Gm3687	NCBI_Gene:105244754,ENSEMBL:ENSMUSG00000090138	MGI:3781863	pseudogene	predicted gene 3687
5	gene	63.81199	63.89963	positive	MGI_C57BL6J_1923511	0610040J01Rik	NCBI_Gene:76261,ENSEMBL:ENSMUSG00000060512	MGI:1923511	protein coding gene	RIKEN cDNA 0610040J01 gene
5	gene	63.88931	63.96890	negative	MGI_C57BL6J_2140767	Rell1	NCBI_Gene:100532,ENSEMBL:ENSMUSG00000047881	MGI:2140767	protein coding gene	RELT-like 1
5	gene	63.92390	63.92497	positive	MGI_C57BL6J_3802175	Gm15819	ENSEMBL:ENSMUSG00000087552	MGI:3802175	lncRNA gene	predicted gene 15819
5	pseudogene	63.99039	63.99087	negative	MGI_C57BL6J_5663977	Gm43840	ENSEMBL:ENSMUSG00000106076	MGI:5663977	pseudogene	predicted gene 43840
5	gene	64.00235	64.00248	negative	MGI_C57BL6J_5455385	Gm25608	ENSEMBL:ENSMUSG00000077209	MGI:5455385	snoRNA gene	predicted gene, 25608
5	gene	64.04497	64.05023	positive	MGI_C57BL6J_1922007	5830416I19Rik	NCBI_Gene:74757,ENSEMBL:ENSMUSG00000106219	MGI:1922007	lncRNA gene	RIKEN cDNA 5830416I19 gene
5	gene	64.09283	64.12835	positive	MGI_C57BL6J_97564	Pgm2	NCBI_Gene:66681,ENSEMBL:ENSMUSG00000029171	MGI:97564	protein coding gene	phosphoglucomutase 2
5	gene	64.10143	64.10151	negative	MGI_C57BL6J_5453744	Gm23967	ENSEMBL:ENSMUSG00000094244	MGI:5453744	miRNA gene	predicted gene, 23967
5	gene	64.10741	64.10750	negative	MGI_C57BL6J_5452172	Gm22395	ENSEMBL:ENSMUSG00000093780	MGI:5452172	miRNA gene	predicted gene, 22395
5	gene	64.14425	64.14438	positive	MGI_C57BL6J_5452336	Gm22559	ENSEMBL:ENSMUSG00000087954	MGI:5452336	snoRNA gene	predicted gene, 22559
5	gene	64.15631	64.35149	positive	MGI_C57BL6J_1889508	Tbc1d1	NCBI_Gene:57915,ENSEMBL:ENSMUSG00000029174	MGI:1889508	protein coding gene	TBC1 domain family, member 1
5	pseudogene	64.18862	64.19104	negative	MGI_C57BL6J_3801976	Gm15824	NCBI_Gene:100188958,ENSEMBL:ENSMUSG00000083435	MGI:3801976	pseudogene	predicted gene 15824
5	gene	64.23393	64.23624	positive	MGI_C57BL6J_5663858	Gm43721	ENSEMBL:ENSMUSG00000104947	MGI:5663858	unclassified gene	predicted gene 43721
5	gene	64.24731	64.24894	positive	MGI_C57BL6J_5826550	Gm46913	NCBI_Gene:108169045	MGI:5826550	protein coding gene	predicted gene, 46913
5	pseudogene	64.25256	64.25323	negative	MGI_C57BL6J_3801858	Gm15823	ENSEMBL:ENSMUSG00000081143	MGI:3801858	pseudogene	predicted gene 15823
5	gene	64.25716	64.25948	positive	MGI_C57BL6J_5621519	Gm38634	NCBI_Gene:102642791	MGI:5621519	lncRNA gene	predicted gene, 38634
5	pseudogene	64.32022	64.32095	positive	MGI_C57BL6J_3648725	Gm6044	NCBI_Gene:595140,ENSEMBL:ENSMUSG00000083100	MGI:3648725	pseudogene	predicted gene 6044
5	gene	64.36051	64.36363	positive	MGI_C57BL6J_5663975	Gm43838	ENSEMBL:ENSMUSG00000105730	MGI:5663975	lncRNA gene	predicted gene 43838
5	gene	64.37770	64.38111	positive	MGI_C57BL6J_5590375	Gm31216	NCBI_Gene:102633380	MGI:5590375	lncRNA gene	predicted gene, 31216
5	gene	64.38332	64.38673	positive	MGI_C57BL6J_5663974	Gm43837	NCBI_Gene:108167360,ENSEMBL:ENSMUSG00000105443	MGI:5663974	lncRNA gene	predicted gene 43837
5	gene	64.43395	64.47359	positive	MGI_C57BL6J_5590522	Gm31363	NCBI_Gene:102633571,ENSEMBL:ENSMUSG00000105105	MGI:5590522	lncRNA gene	predicted gene, 31363
5	gene	64.45481	64.46794	negative	MGI_C57BL6J_1917249	1700027F09Rik	NCBI_Gene:69999,ENSEMBL:ENSMUSG00000100911	MGI:1917249	lncRNA gene	RIKEN cDNA 1700027F09 gene
5	gene	64.46806	64.46901	positive	MGI_C57BL6J_1922486	4930526M16Rik	ENSEMBL:ENSMUSG00000105251	MGI:1922486	unclassified gene	RIKEN cDNA 4930526M16 gene
5	gene	64.47701	64.48397	positive	MGI_C57BL6J_1924632	C030018K13Rik	NCBI_Gene:77382,ENSEMBL:ENSMUSG00000105352	MGI:1924632	lncRNA gene	RIKEN cDNA C030018K13 gene
5	gene	64.53193	64.53782	positive	MGI_C57BL6J_5590582	Gm31423	NCBI_Gene:102633646	MGI:5590582	lncRNA gene	predicted gene, 31423
5	gene	64.55818	64.55856	positive	MGI_C57BL6J_5663973	Gm43836	ENSEMBL:ENSMUSG00000106566	MGI:5663973	unclassified gene	predicted gene 43836
5	gene	64.56377	64.56392	positive	MGI_C57BL6J_5663972	Gm43835	ENSEMBL:ENSMUSG00000104961	MGI:5663972	unclassified gene	predicted gene 43835
5	gene	64.56418	64.56482	negative	MGI_C57BL6J_5662703	Gm42566	ENSEMBL:ENSMUSG00000104806	MGI:5662703	unclassified gene	predicted gene 42566
5	gene	64.59386	64.61070	negative	MGI_C57BL6J_3781892	Gm3716	NCBI_Gene:100042198,ENSEMBL:ENSMUSG00000105402	MGI:3781892	lncRNA gene	predicted gene 3716
5	gene	64.63536	64.63739	negative	MGI_C57BL6J_5662701	Gm42564	ENSEMBL:ENSMUSG00000105183	MGI:5662701	lncRNA gene	predicted gene 42564
5	gene	64.63584	64.63762	positive	MGI_C57BL6J_5662702	Gm42565	ENSEMBL:ENSMUSG00000104928	MGI:5662702	lncRNA gene	predicted gene 42565
5	gene	64.64763	64.64775	negative	MGI_C57BL6J_5455083	Gm25306	ENSEMBL:ENSMUSG00000093029	MGI:5455083	miRNA gene	predicted gene, 25306
5	gene	64.69343	64.69941	negative	MGI_C57BL6J_5477255	Gm26761	NCBI_Gene:102633882,ENSEMBL:ENSMUSG00000097668	MGI:5477255	lncRNA gene	predicted gene, 26761
5	gene	64.70821	64.80412	negative	MGI_C57BL6J_5012218	Gm20033	NCBI_Gene:105244755,ENSEMBL:ENSMUSG00000097640	MGI:5012218	lncRNA gene	predicted gene, 20033
5	gene	64.80236	64.80497	negative	MGI_C57BL6J_5621342	Gm38457	NCBI_Gene:102634072	MGI:5621342	protein coding gene	predicted gene, 38457
5	gene	64.80339	64.83290	positive	MGI_C57BL6J_1342773	Klf3	NCBI_Gene:16599,ENSEMBL:ENSMUSG00000029178	MGI:1342773	protein coding gene	Kruppel-like factor 3 (basic)
5	gene	64.80401	64.80573	positive	MGI_C57BL6J_3041194	C230096K16Rik	ENSEMBL:ENSMUSG00000106205	MGI:3041194	protein coding gene	RIKEN cDNA C230096K16 gene
5	gene	64.81684	64.81975	positive	MGI_C57BL6J_5590843	Gm31684	NCBI_Gene:102633994	MGI:5590843	lncRNA gene	predicted gene, 31684
5	gene	64.87954	64.88827	positive	MGI_C57BL6J_5591048	Gm31889	NCBI_Gene:102634262	MGI:5591048	lncRNA gene	predicted gene, 31889
5	pseudogene	64.89693	64.89854	negative	MGI_C57BL6J_5434366	Gm21011	NCBI_Gene:100534279	MGI:5434366	pseudogene	predicted gene, 21011
5	gene	64.92468	64.93359	negative	MGI_C57BL6J_1341295	Tlr1	NCBI_Gene:21897,ENSEMBL:ENSMUSG00000044827	MGI:1341295	protein coding gene	toll-like receptor 1
5	gene	64.95203	64.97114	negative	MGI_C57BL6J_1341296	Tlr6	NCBI_Gene:21899,ENSEMBL:ENSMUSG00000051498	MGI:1341296	protein coding gene	toll-like receptor 6
5	gene	64.97007	65.04190	positive	MGI_C57BL6J_1915553	Fam114a1	NCBI_Gene:68303,ENSEMBL:ENSMUSG00000029185	MGI:1915553	protein coding gene	family with sequence similarity 114, member A1
5	gene	64.97032	64.97039	positive	MGI_C57BL6J_3718549	Mir574	miRBase:MI0005518,NCBI_Gene:100124451,ENSEMBL:ENSMUSG00000077042	MGI:3718549	miRNA gene	microRNA 574
5	gene	64.97265	64.97495	positive	MGI_C57BL6J_5663764	Gm43627	ENSEMBL:ENSMUSG00000106186	MGI:5663764	unclassified gene	predicted gene 43627
5	gene	64.99239	65.02071	negative	MGI_C57BL6J_5591533	Gm32374	NCBI_Gene:102634899	MGI:5591533	lncRNA gene	predicted gene, 32374
5	gene	65.05435	65.09218	negative	MGI_C57BL6J_2685292	Tmem156	NCBI_Gene:243025,ENSEMBL:ENSMUSG00000037913	MGI:2685292	protein coding gene	transmembrane protein 156
5	gene	65.10753	65.16819	positive	MGI_C57BL6J_1919028	Klhl5	NCBI_Gene:71778,ENSEMBL:ENSMUSG00000054920	MGI:1919028	protein coding gene	kelch-like 5
5	gene	65.13630	65.13642	positive	MGI_C57BL6J_5454931	Gm25154	ENSEMBL:ENSMUSG00000087748	MGI:5454931	rRNA gene	predicted gene, 25154
5	gene	65.19966	65.26041	positive	MGI_C57BL6J_2443231	Wdr19	NCBI_Gene:213081,ENSEMBL:ENSMUSG00000037890	MGI:2443231	protein coding gene	WD repeat domain 19
5	gene	65.26185	65.33648	negative	MGI_C57BL6J_97891	Rfc1	NCBI_Gene:19687,ENSEMBL:ENSMUSG00000029191	MGI:97891	protein coding gene	replication factor C (activator 1) 1
5	gene	65.30781	65.30899	negative	MGI_C57BL6J_5663765	Gm43628	ENSEMBL:ENSMUSG00000105935	MGI:5663765	unclassified gene	predicted gene 43628
5	gene	65.34831	65.38402	positive	MGI_C57BL6J_1932466	Klb	NCBI_Gene:83379,ENSEMBL:ENSMUSG00000029195	MGI:1932466	protein coding gene	klotho beta
5	gene	65.38836	65.39144	negative	MGI_C57BL6J_1298373	Rpl9	NCBI_Gene:20005,ENSEMBL:ENSMUSG00000047215	MGI:1298373	protein coding gene	ribosomal protein L9
5	gene	65.39150	65.41069	positive	MGI_C57BL6J_1934604	Lias	NCBI_Gene:79464,ENSEMBL:ENSMUSG00000029199	MGI:1934604	protein coding gene	lipoic acid synthetase
5	gene	65.40575	65.40652	positive	MGI_C57BL6J_1915726	1110003F10Rik	ENSEMBL:ENSMUSG00000106291	MGI:1915726	unclassified gene	RIKEN cDNA 1110003F10 gene
5	gene	65.41065	65.41303	negative	MGI_C57BL6J_5663448	Gm43311	ENSEMBL:ENSMUSG00000105896	MGI:5663448	unclassified gene	predicted gene 43311
5	gene	65.41321	65.43595	negative	MGI_C57BL6J_1306785	Ugdh	NCBI_Gene:22235,ENSEMBL:ENSMUSG00000029201	MGI:1306785	protein coding gene	UDP-glucose dehydrogenase
5	gene	65.42743	65.49283	negative	MGI_C57BL6J_5663689	Gm43552	ENSEMBL:ENSMUSG00000105835	MGI:5663689	protein coding gene	predicted gene 43552
5	gene	65.43011	65.43158	negative	MGI_C57BL6J_5663426	Gm43289	ENSEMBL:ENSMUSG00000104917	MGI:5663426	unclassified gene	predicted gene 43289
5	gene	65.44684	65.53718	negative	MGI_C57BL6J_1915802	Smim14	NCBI_Gene:68552,ENSEMBL:ENSMUSG00000037822	MGI:1915802	protein coding gene	small integral membrane protein 14
5	gene	65.47651	65.47806	negative	MGI_C57BL6J_5663427	Gm43290	ENSEMBL:ENSMUSG00000104641	MGI:5663427	unclassified gene	predicted gene 43290
5	gene	65.49310	65.49402	positive	MGI_C57BL6J_1925464	4930589O11Rik	ENSEMBL:ENSMUSG00000107195	MGI:1925464	unclassified gene	RIKEN cDNA 4930589O11 gene
5	gene	65.53157	65.53576	negative	MGI_C57BL6J_5662862	Gm42725	ENSEMBL:ENSMUSG00000105601	MGI:5662862	unclassified gene	predicted gene 42725
5	gene	65.53708	65.59899	positive	MGI_C57BL6J_1858216	Ube2k	NCBI_Gene:53323,ENSEMBL:ENSMUSG00000029203	MGI:1858216	protein coding gene	ubiquitin-conjugating enzyme E2K
5	gene	65.54166	65.54640	positive	MGI_C57BL6J_5623194	Gm40309	NCBI_Gene:105244756,ENSEMBL:ENSMUSG00000107362	MGI:5623194	lncRNA gene	predicted gene, 40309
5	gene	65.58772	65.59144	negative	MGI_C57BL6J_5662863	Gm42726	ENSEMBL:ENSMUSG00000107102	MGI:5662863	lncRNA gene	predicted gene 42726
5	gene	65.60572	65.69827	negative	MGI_C57BL6J_1918771	Pds5a	NCBI_Gene:71521,ENSEMBL:ENSMUSG00000029202	MGI:1918771	protein coding gene	PDS5 cohesin associated factor A
5	gene	65.61695	65.61977	positive	MGI_C57BL6J_5662864	Gm42727	ENSEMBL:ENSMUSG00000106767	MGI:5662864	unclassified gene	predicted gene 42727
5	gene	65.62393	65.62686	positive	MGI_C57BL6J_5662866	Gm42729	ENSEMBL:ENSMUSG00000106696	MGI:5662866	unclassified gene	predicted gene 42729
5	gene	65.66081	65.66088	positive	MGI_C57BL6J_5454176	Gm24399	ENSEMBL:ENSMUSG00000088494	MGI:5454176	snRNA gene	predicted gene, 24399
5	gene	65.67261	65.67416	negative	MGI_C57BL6J_5662865	Gm42728	ENSEMBL:ENSMUSG00000107158	MGI:5662865	unclassified gene	predicted gene 42728
5	gene	65.68001	65.68234	negative	MGI_C57BL6J_2441875	C030017G13Rik	ENSEMBL:ENSMUSG00000107050	MGI:2441875	unclassified gene	RIKEN cDNA C030017G13 gene
5	gene	65.74545	65.75701	negative	MGI_C57BL6J_5826582	Gm46945	NCBI_Gene:108169121	MGI:5826582	lncRNA gene	predicted gene, 46945
5	gene	65.76099	65.76438	negative	MGI_C57BL6J_1921484	N4bp2os	ENSEMBL:ENSMUSG00000106978	MGI:1921484	lncRNA gene	NEDD4 binding protein 2, opposite strand
5	gene	65.76237	65.76438	negative	MGI_C57BL6J_3822457	Gm5296	NA	NA	unclassified gene	predicted gene 5296
5	gene	65.76329	65.83011	positive	MGI_C57BL6J_2684414	N4bp2	NCBI_Gene:333789,ENSEMBL:ENSMUSG00000037795	MGI:2684414	protein coding gene	NEDD4 binding protein 2
5	gene	65.77701	65.77721	positive	MGI_C57BL6J_5454123	Gm24346	ENSEMBL:ENSMUSG00000089337	MGI:5454123	snoRNA gene	predicted gene, 24346
5	gene	65.77801	65.78052	positive	MGI_C57BL6J_5662785	Gm42648	ENSEMBL:ENSMUSG00000106682	MGI:5662785	unclassified gene	predicted gene 42648
5	gene	65.83729	65.85831	negative	MGI_C57BL6J_3781698	Gm3521	NCBI_Gene:102634968	MGI:3781698	lncRNA gene	predicted gene 3521
5	gene	65.85333	65.85496	positive	MGI_C57BL6J_5662782	Gm42645	ENSEMBL:ENSMUSG00000106713	MGI:5662782	unclassified gene	predicted gene 42645
5	gene	65.85732	65.85823	positive	MGI_C57BL6J_5662783	Gm42646	ENSEMBL:ENSMUSG00000106776	MGI:5662783	unclassified gene	predicted gene 42646
5	gene	65.85932	65.86002	positive	MGI_C57BL6J_5663141	Gm43004	ENSEMBL:ENSMUSG00000106681	MGI:5663141	unclassified gene	predicted gene 43004
5	gene	65.86121	65.89670	positive	MGI_C57BL6J_1921984	Rhoh	NCBI_Gene:74734,ENSEMBL:ENSMUSG00000029204	MGI:1921984	protein coding gene	ras homolog family member H
5	gene	65.91113	65.91384	negative	MGI_C57BL6J_5591633	Gm32474	NCBI_Gene:102635037	MGI:5591633	lncRNA gene	predicted gene, 32474
5	gene	65.91162	65.91595	positive	MGI_C57BL6J_5663906	Gm43769	ENSEMBL:ENSMUSG00000107254	MGI:5663906	unclassified gene	predicted gene 43769
5	gene	65.91403	65.91975	negative	MGI_C57BL6J_5591715	Gm32556	NCBI_Gene:102635144	MGI:5591715	lncRNA gene	predicted gene, 32556
5	gene	65.93476	65.97756	positive	MGI_C57BL6J_1202403	Chrna9	NCBI_Gene:231252,ENSEMBL:ENSMUSG00000029205	MGI:1202403	protein coding gene	cholinergic receptor, nicotinic, alpha polypeptide 9
5	gene	65.95119	65.95221	positive	MGI_C57BL6J_1922236	4930480C01Rik	NCBI_Gene:102635219,ENSEMBL:ENSMUSG00000106768	MGI:1922236	lncRNA gene	RIKEN cDNA 4930480C01 gene
5	gene	65.96385	65.96543	positive	MGI_C57BL6J_5663908	Gm43771	ENSEMBL:ENSMUSG00000107049	MGI:5663908	unclassified gene	predicted gene 43771
5	gene	65.97936	66.00428	negative	MGI_C57BL6J_3041166	9130230L23Rik	NCBI_Gene:231253,ENSEMBL:ENSMUSG00000054598	MGI:3041166	protein coding gene	RIKEN cDNA 9130230L23 gene
5	gene	65.98905	65.98912	positive	MGI_C57BL6J_5455729	Gm25952	ENSEMBL:ENSMUSG00000093070	MGI:5455729	miRNA gene	predicted gene, 25952
5	gene	66.00832	66.01038	negative	MGI_C57BL6J_5623195	Gm40310	NCBI_Gene:105244757	MGI:5623195	lncRNA gene	predicted gene, 40310
5	gene	66.01655	66.17312	negative	MGI_C57BL6J_2384294	Rbm47	NCBI_Gene:245945,ENSEMBL:ENSMUSG00000070780	MGI:2384294	protein coding gene	RNA binding motif protein 47
5	gene	66.06950	66.07290	negative	MGI_C57BL6J_5663912	Gm43775	ENSEMBL:ENSMUSG00000107304	MGI:5663912	unclassified gene	predicted gene 43775
5	gene	66.08021	66.08447	negative	MGI_C57BL6J_5663460	Gm43323	ENSEMBL:ENSMUSG00000107390	MGI:5663460	unclassified gene	predicted gene 43323
5	gene	66.15118	66.17494	positive	MGI_C57BL6J_5477219	Gm26725	NCBI_Gene:102635521,ENSEMBL:ENSMUSG00000097092	MGI:5477219	lncRNA gene	predicted gene, 26725
5	gene	66.16456	66.16466	negative	MGI_C57BL6J_5452706	Gm22929	ENSEMBL:ENSMUSG00000093258	MGI:5452706	snRNA gene	predicted gene, 22929
5	gene	66.16661	66.19134	negative	MGI_C57BL6J_1920889	1700126H18Rik	NCBI_Gene:73639,ENSEMBL:ENSMUSG00000107014	MGI:1920889	lncRNA gene	RIKEN cDNA 1700126H18 gene
5	gene	66.17169	66.17221	negative	MGI_C57BL6J_5623196	Gm40311	NCBI_Gene:105244758	MGI:5623196	lncRNA gene	predicted gene, 40311
5	pseudogene	66.17496	66.17536	negative	MGI_C57BL6J_5663909	Gm43772	NCBI_Gene:108169122,ENSEMBL:ENSMUSG00000107069	MGI:5663909	pseudogene	predicted gene 43772
5	pseudogene	66.19788	66.20133	negative	MGI_C57BL6J_3783236	Gm15794	NCBI_Gene:666854,ENSEMBL:ENSMUSG00000084108	MGI:3783236	pseudogene	predicted gene 15794
5	gene	66.21475	66.21768	positive	MGI_C57BL6J_3781994	Gm3822	ENSEMBL:ENSMUSG00000107125	MGI:3781994	protein coding gene	predicted gene 3822
5	gene	66.25972	66.29875	positive	MGI_C57BL6J_1918168	Nsun7	NCBI_Gene:70918,ENSEMBL:ENSMUSG00000029206	MGI:1918168	protein coding gene	NOL1/NOP2/Sun domain family, member 7
5	gene	66.29870	66.61882	negative	MGI_C57BL6J_108405	Apbb2	NCBI_Gene:11787,ENSEMBL:ENSMUSG00000029207	MGI:108405	protein coding gene	amyloid beta (A4) precursor protein-binding, family B, member 2
5	gene	66.32100	66.32302	negative	MGI_C57BL6J_5663927	Gm43790	ENSEMBL:ENSMUSG00000106818	MGI:5663927	unclassified gene	predicted gene 43790
5	gene	66.32574	66.32606	negative	MGI_C57BL6J_5452960	Gm23183	ENSEMBL:ENSMUSG00000084544	MGI:5452960	unclassified non-coding RNA gene	predicted gene, 23183
5	gene	66.34589	66.34722	negative	MGI_C57BL6J_5663930	Gm43793	ENSEMBL:ENSMUSG00000107155	MGI:5663930	unclassified gene	predicted gene 43793
5	pseudogene	66.35692	66.35719	positive	MGI_C57BL6J_3826595	Gm16273	ENSEMBL:ENSMUSG00000106910	MGI:3826595	pseudogene	predicted gene 16273
5	gene	66.42992	66.43213	negative	MGI_C57BL6J_5663929	Gm43792	ENSEMBL:ENSMUSG00000106732	MGI:5663929	unclassified gene	predicted gene 43792
5	gene	66.44373	66.44442	negative	MGI_C57BL6J_5663931	Gm43794	ENSEMBL:ENSMUSG00000106772	MGI:5663931	unclassified gene	predicted gene 43794
5	gene	66.52419	66.52611	negative	MGI_C57BL6J_5663480	Gm43343	ENSEMBL:ENSMUSG00000107091	MGI:5663480	unclassified gene	predicted gene 43343
5	gene	66.53180	66.53416	negative	MGI_C57BL6J_5663932	Gm43795	ENSEMBL:ENSMUSG00000106720	MGI:5663932	unclassified gene	predicted gene 43795
5	gene	66.59246	66.59557	negative	MGI_C57BL6J_2444587	C530043K16Rik	ENSEMBL:ENSMUSG00000106706	MGI:2444587	unclassified non-coding RNA gene	RIKEN cDNA C530043K16 gene
5	gene	66.62650	66.67650	negative	MGI_C57BL6J_5446771	Uchl1os	NCBI_Gene:101202684,ENSEMBL:ENSMUSG00000087601	MGI:5446771	antisense lncRNA gene	ubiquitin carboxy-terminal hydrolase L1, opposite strand
5	gene	66.67609	66.68723	positive	MGI_C57BL6J_103149	Uchl1	NCBI_Gene:22223,ENSEMBL:ENSMUSG00000029223	MGI:103149	protein coding gene	ubiquitin carboxy-terminal hydrolase L1
5	gene	66.68888	66.69139	positive	MGI_C57BL6J_5663416	Gm43279	ENSEMBL:ENSMUSG00000107300	MGI:5663416	unclassified gene	predicted gene 43279
5	gene	66.71837	66.71992	positive	MGI_C57BL6J_5663417	Gm43280	ENSEMBL:ENSMUSG00000107284	MGI:5663417	unclassified gene	predicted gene 43280
5	gene	66.71837	66.71992	negative	MGI_C57BL6J_1918405	4933424C09Rik	NA	NA	unclassified gene	RIKEN cDNA 4933424C09 gene
5	gene	66.74583	67.05716	positive	MGI_C57BL6J_1924819	Limch1	NCBI_Gene:77569,ENSEMBL:ENSMUSG00000037736	MGI:1924819	protein coding gene	LIM and calponin homology domains 1
5	pseudogene	66.89020	66.89657	positive	MGI_C57BL6J_3643656	Gm6517	NCBI_Gene:624662,ENSEMBL:ENSMUSG00000082420	MGI:3643656	pseudogene	predicted gene 6517
5	pseudogene	66.90286	66.90411	negative	MGI_C57BL6J_5434402	Gm21047	NCBI_Gene:100534378	MGI:5434402	pseudogene	predicted gene, 21047
5	gene	66.91601	66.91871	positive	MGI_C57BL6J_5663418	Gm43281	ENSEMBL:ENSMUSG00000106749	MGI:5663418	unclassified gene	predicted gene 43281
5	gene	66.96943	66.97159	positive	MGI_C57BL6J_5663419	Gm43282	ENSEMBL:ENSMUSG00000107290	MGI:5663419	unclassified gene	predicted gene 43282
5	gene	66.98509	66.98564	negative	MGI_C57BL6J_3801730	Gm15949	ENSEMBL:ENSMUSG00000085839	MGI:3801730	lncRNA gene	predicted gene 15949
5	gene	66.98882	66.99121	negative	MGI_C57BL6J_3801731	Gm15948	ENSEMBL:ENSMUSG00000086964	MGI:3801731	lncRNA gene	predicted gene 15948
5	gene	66.99948	67.00187	positive	MGI_C57BL6J_5592199	Gm33040	NCBI_Gene:102635792	MGI:5592199	lncRNA gene	predicted gene, 33040
5	gene	67.03843	67.03938	negative	MGI_C57BL6J_5662850	Gm42713	ENSEMBL:ENSMUSG00000106785	MGI:5662850	unclassified gene	predicted gene 42713
5	gene	67.05368	67.05379	negative	MGI_C57BL6J_5453618	Gm23841	ENSEMBL:ENSMUSG00000080601	MGI:5453618	miRNA gene	predicted gene, 23841
5	gene	67.09440	67.09930	negative	MGI_C57BL6J_1100882	Phox2b	NCBI_Gene:18935,ENSEMBL:ENSMUSG00000012520	MGI:1100882	protein coding gene	paired-like homeobox 2b
5	gene	67.09883	67.13015	positive	MGI_C57BL6J_5592326	Gm33167	NCBI_Gene:102635966,ENSEMBL:ENSMUSG00000106995	MGI:5592326	lncRNA gene	predicted gene, 33167
5	gene	67.22087	67.23189	negative	MGI_C57BL6J_5592452	Gm33293	NCBI_Gene:102636139	MGI:5592452	lncRNA gene	predicted gene, 33293
5	gene	67.24380	67.25023	negative	MGI_C57BL6J_5623199	Gm40314	NCBI_Gene:105244761	MGI:5623199	lncRNA gene	predicted gene, 40314
5	gene	67.25997	67.26126	negative	MGI_C57BL6J_5662807	Gm42670	ENSEMBL:ENSMUSG00000107319	MGI:5662807	lncRNA gene	predicted gene 42670
5	gene	67.26056	67.29146	positive	MGI_C57BL6J_1915128	Tmem33	NCBI_Gene:67878,ENSEMBL:ENSMUSG00000037720	MGI:1915128	protein coding gene	transmembrane protein 33
5	gene	67.30694	67.35844	positive	MGI_C57BL6J_1923690	Slc30a9	NCBI_Gene:109108,ENSEMBL:ENSMUSG00000029221	MGI:1923690	protein coding gene	solute carrier family 30 (zinc transporter), member 9
5	gene	67.36039	67.36660	positive	MGI_C57BL6J_5663835	Gm43698	ENSEMBL:ENSMUSG00000107266	MGI:5663835	lncRNA gene	predicted gene 43698
5	gene	67.38118	67.38214	negative	MGI_C57BL6J_1924522	9430027B09Rik	NA	NA	unclassified gene	RIKEN cDNA 9430027B09 gene
5	gene	67.39215	67.42840	negative	MGI_C57BL6J_3648414	Bend4	NCBI_Gene:666938,ENSEMBL:ENSMUSG00000092060	MGI:3648414	protein coding gene	BEN domain containing 4
5	gene	67.40547	67.41798	positive	MGI_C57BL6J_5592504	Gm33345	NCBI_Gene:102636213	MGI:5592504	lncRNA gene	predicted gene, 33345
5	gene	67.42768	67.43799	positive	MGI_C57BL6J_5477250	Gm26756	ENSEMBL:ENSMUSG00000097840	MGI:5477250	lncRNA gene	predicted gene, 26756
5	gene	67.42799	67.43040	positive	MGI_C57BL6J_5662769	Gm42632	ENSEMBL:ENSMUSG00000106832	MGI:5662769	unclassified gene	predicted gene 42632
5	gene	67.45049	67.45731	positive	MGI_C57BL6J_5623200	Gm40315	NCBI_Gene:105244762	MGI:5623200	lncRNA gene	predicted gene, 40315
5	pseudogene	67.45341	67.45387	positive	MGI_C57BL6J_5012257	Gm20072	NCBI_Gene:102636357,ENSEMBL:ENSMUSG00000106925	MGI:5012257	pseudogene	predicted gene, 20072
5	gene	67.46390	67.47790	positive	MGI_C57BL6J_2444116	C330024D21Rik	NCBI_Gene:320479,ENSEMBL:ENSMUSG00000107385	MGI:2444116	lncRNA gene	RIKEN cDNA C330024D21 gene
5	gene	67.60722	67.60783	negative	MGI_C57BL6J_1916650	1700025A08Rik	ENSEMBL:ENSMUSG00000106947	MGI:1916650	unclassified gene	RIKEN cDNA 1700025A08 gene
5	gene	67.60788	67.62355	positive	MGI_C57BL6J_3041225	Shisa3	NCBI_Gene:330096,ENSEMBL:ENSMUSG00000050010	MGI:3041225	protein coding gene	shisa family member 3
5	gene	67.61814	67.84748	negative	MGI_C57BL6J_1330848	Atp8a1	NCBI_Gene:11980,ENSEMBL:ENSMUSG00000037685	MGI:1330848	protein coding gene	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
5	gene	67.63183	67.63192	negative	MGI_C57BL6J_5453394	Gm23617	ENSEMBL:ENSMUSG00000094435	MGI:5453394	miRNA gene	predicted gene, 23617
5	gene	67.63366	67.63531	negative	MGI_C57BL6J_5662872	Gm42735	ENSEMBL:ENSMUSG00000107041	MGI:5662872	unclassified gene	predicted gene 42735
5	gene	67.64240	67.64678	positive	MGI_C57BL6J_3705145	Gm15478	ENSEMBL:ENSMUSG00000085363	MGI:3705145	lncRNA gene	predicted gene 15478
5	gene	67.69766	67.70254	negative	MGI_C57BL6J_5826551	Gm46914	NCBI_Gene:108169046	MGI:5826551	lncRNA gene	predicted gene, 46914
5	gene	67.75758	67.75933	negative	MGI_C57BL6J_5662874	Gm42737	ENSEMBL:ENSMUSG00000106859	MGI:5662874	unclassified gene	predicted gene 42737
5	gene	67.83335	67.83683	negative	MGI_C57BL6J_2443017	D630030B08Rik	ENSEMBL:ENSMUSG00000106837	MGI:2443017	unclassified gene	RIKEN cDNA D630030B08 gene
5	gene	67.84312	67.84442	negative	MGI_C57BL6J_5662603	Gm42466	ENSEMBL:ENSMUSG00000107136	MGI:5662603	unclassified gene	predicted gene 42466
5	gene	67.84707	67.90901	positive	MGI_C57BL6J_3705209	Gm15477	NCBI_Gene:108169047,ENSEMBL:ENSMUSG00000087261	MGI:3705209	lncRNA gene	predicted gene 15477
5	gene	67.87288	67.87423	positive	MGI_C57BL6J_5662873	Gm42736	ENSEMBL:ENSMUSG00000107206	MGI:5662873	unclassified gene	predicted gene 42736
5	gene	67.92726	67.94642	negative	MGI_C57BL6J_5434069	Gm21905	ENSEMBL:ENSMUSG00000095346	MGI:5434069	protein coding gene	predicted gene, 21905
5	gene	67.93361	67.94308	negative	MGI_C57BL6J_1921115	4930425K10Rik	NCBI_Gene:73865,ENSEMBL:ENSMUSG00000106880	MGI:1921115	lncRNA gene	RIKEN cDNA 4930425K10 gene
5	gene	67.94167	67.97707	positive	MGI_C57BL6J_3645064	Gm5108	NCBI_Gene:330097,ENSEMBL:ENSMUSG00000094719	MGI:3645064	protein coding gene	predicted gene 5108
5	gene	67.98067	67.98436	positive	MGI_C57BL6J_5663164	Gm43027	ENSEMBL:ENSMUSG00000106897	MGI:5663164	unclassified gene	predicted gene 43027
5	pseudogene	67.98853	67.98902	negative	MGI_C57BL6J_5663165	Gm43028	NCBI_Gene:108169095,ENSEMBL:ENSMUSG00000107257	MGI:5663165	pseudogene	predicted gene 43028
5	gene	68.03184	68.16640	positive	MGI_C57BL6J_3577767	Grxcr1	NCBI_Gene:433899,ENSEMBL:ENSMUSG00000068082	MGI:3577767	protein coding gene	glutaredoxin, cysteine rich 1
5	gene	68.08249	68.08437	negative	MGI_C57BL6J_5663162	Gm43025	ENSEMBL:ENSMUSG00000106747	MGI:5663162	unclassified gene	predicted gene 43025
5	pseudogene	68.27747	68.27780	positive	MGI_C57BL6J_5663163	Gm43026	ENSEMBL:ENSMUSG00000107289	MGI:5663163	pseudogene	predicted gene 43026
5	gene	68.56617	68.56630	negative	MGI_C57BL6J_5453382	Gm23605	ENSEMBL:ENSMUSG00000087880	MGI:5453382	snoRNA gene	predicted gene, 23605
5	pseudogene	68.56950	68.59475	negative	MGI_C57BL6J_5662987	Gm42850	ENSEMBL:ENSMUSG00000106854	MGI:5662987	pseudogene	predicted gene 42850
5	gene	68.95741	68.96039	negative	MGI_C57BL6J_5663979	Gm43842	ENSEMBL:ENSMUSG00000107117	MGI:5663979	unclassified gene	predicted gene 43842
5	pseudogene	69.02430	69.04090	negative	MGI_C57BL6J_5594862	Gm35703	NCBI_Gene:102639374	MGI:5594862	pseudogene	predicted gene, 35703
5	gene	69.10928	69.34171	negative	MGI_C57BL6J_2443804	Kctd8	NCBI_Gene:243043,ENSEMBL:ENSMUSG00000037653	MGI:2443804	protein coding gene	potassium channel tetramerisation domain containing 8
5	gene	69.16867	69.17025	negative	MGI_C57BL6J_2140783	D130004A15Rik	ENSEMBL:ENSMUSG00000107208	MGI:2140783	unclassified gene	RIKEN cDNA D130004A15 gene
5	gene	69.18108	69.18211	negative	MGI_C57BL6J_5663508	Gm43371	ENSEMBL:ENSMUSG00000107234	MGI:5663508	unclassified gene	predicted gene 43371
5	gene	69.21742	69.22029	negative	MGI_C57BL6J_5663510	Gm43373	ENSEMBL:ENSMUSG00000107363	MGI:5663510	unclassified gene	predicted gene 43373
5	gene	69.22185	69.22423	negative	MGI_C57BL6J_5663511	Gm43374	ENSEMBL:ENSMUSG00000106673	MGI:5663511	unclassified gene	predicted gene 43374
5	gene	69.26359	69.26571	negative	MGI_C57BL6J_5663367	Gm43230	ENSEMBL:ENSMUSG00000106753	MGI:5663367	unclassified gene	predicted gene 43230
5	gene	69.27572	69.27757	negative	MGI_C57BL6J_5663366	Gm43229	ENSEMBL:ENSMUSG00000107312	MGI:5663366	unclassified gene	predicted gene 43229
5	gene	69.31171	69.31607	negative	MGI_C57BL6J_5663025	Gm42888	ENSEMBL:ENSMUSG00000107148	MGI:5663025	unclassified gene	predicted gene 42888
5	gene	69.34078	69.34089	positive	MGI_C57BL6J_5454145	Gm24368	ENSEMBL:ENSMUSG00000093129	MGI:5454145	miRNA gene	predicted gene, 24368
5	gene	69.38607	69.38617	negative	MGI_C57BL6J_5453709	Gm23932	ENSEMBL:ENSMUSG00000096290	MGI:5453709	snRNA gene	predicted gene, 23932
5	pseudogene	69.46106	69.46181	positive	MGI_C57BL6J_3644922	Gm5867	NCBI_Gene:545756,ENSEMBL:ENSMUSG00000043484	MGI:3644922	pseudogene	predicted gene 5867
5	gene	69.50384	69.50496	negative	MGI_C57BL6J_5663024	Gm42887	ENSEMBL:ENSMUSG00000106986	MGI:5663024	unclassified gene	predicted gene 42887
5	gene	69.51667	69.54265	negative	MGI_C57BL6J_1922831	Yipf7	NCBI_Gene:75581,ENSEMBL:ENSMUSG00000029158	MGI:1922831	protein coding gene	Yip1 domain family, member 7
5	gene	69.55656	69.55688	negative	MGI_C57BL6J_1920391	3110031N09Rik	ENSEMBL:ENSMUSG00000107291	MGI:1920391	unclassified gene	RIKEN cDNA 3110031N09 gene
5	gene	69.55691	69.57597	positive	MGI_C57BL6J_2140726	Guf1	NCBI_Gene:231279,ENSEMBL:ENSMUSG00000029208	MGI:2140726	protein coding gene	GUF1 homolog, GTPase
5	gene	69.57311	69.59234	negative	MGI_C57BL6J_1915230	Gnpda2	NCBI_Gene:67980,ENSEMBL:ENSMUSG00000029209	MGI:1915230	protein coding gene	glucosamine-6-phosphate deaminase 2
5	gene	69.75240	69.75253	negative	MGI_C57BL6J_5455821	Gm26044	ENSEMBL:ENSMUSG00000080566	MGI:5455821	snRNA gene	predicted gene, 26044
5	gene	69.91909	69.91918	positive	MGI_C57BL6J_5453438	Gm23661	ENSEMBL:ENSMUSG00000084579	MGI:5453438	snRNA gene	predicted gene, 23661
5	pseudogene	69.93152	69.93181	negative	MGI_C57BL6J_5663276	Gm43139	ENSEMBL:ENSMUSG00000106284	MGI:5663276	pseudogene	predicted gene 43139
5	gene	70.18679	70.18685	negative	MGI_C57BL6J_5452844	Gm23067	ENSEMBL:ENSMUSG00000088863	MGI:5452844	snRNA gene	predicted gene, 23067
5	gene	70.55084	70.55095	negative	MGI_C57BL6J_5455849	Gm26072	ENSEMBL:ENSMUSG00000094803	MGI:5455849	snRNA gene	predicted gene, 26072
5	pseudogene	70.55361	70.55422	negative	MGI_C57BL6J_5662789	Gm42652	ENSEMBL:ENSMUSG00000106613	MGI:5662789	pseudogene	predicted gene 42652
5	gene	70.56127	70.56410	positive	MGI_C57BL6J_5662790	Gm42653	ENSEMBL:ENSMUSG00000106549	MGI:5662790	unclassified gene	predicted gene 42653
5	gene	70.75105	70.84262	negative	MGI_C57BL6J_103156	Gabrg1	NCBI_Gene:14405,ENSEMBL:ENSMUSG00000001260	MGI:103156	protein coding gene	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
5	gene	70.95760	71.09585	negative	MGI_C57BL6J_95614	Gabra2	NCBI_Gene:14395,ENSEMBL:ENSMUSG00000000560	MGI:95614	protein coding gene	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
5	gene	71.44282	71.54820	negative	MGI_C57BL6J_1925424	Cox7b2	NCBI_Gene:78174,ENSEMBL:ENSMUSG00000049387	MGI:1925424	protein coding gene	cytochrome c oxidase subunit 7B2
5	gene	71.56973	71.65831	negative	MGI_C57BL6J_95616	Gabra4	NCBI_Gene:14397,ENSEMBL:ENSMUSG00000029211	MGI:95616	protein coding gene	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
5	gene	71.65805	72.14957	positive	MGI_C57BL6J_95619	Gabrb1	NCBI_Gene:14400,ENSEMBL:ENSMUSG00000029212	MGI:95619	protein coding gene	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
5	gene	71.68027	71.70173	negative	MGI_C57BL6J_5621447	Gm38562	NCBI_Gene:102641529,ENSEMBL:ENSMUSG00000105489	MGI:5621447	lncRNA gene	predicted gene, 38562
5	gene	71.74825	71.75172	positive	MGI_C57BL6J_2443900	C230036F13Rik	NA	NA	unclassified gene	RIKEN cDNA C230036F13 gene
5	pseudogene	72.03270	72.03351	negative	MGI_C57BL6J_3783062	Gm15617	NCBI_Gene:100384876,ENSEMBL:ENSMUSG00000080736	MGI:3783062	pseudogene	predicted gene 15617
5	pseudogene	72.04715	72.04815	positive	MGI_C57BL6J_3783061	Gm15616	NCBI_Gene:666545,ENSEMBL:ENSMUSG00000082705	MGI:3783061	pseudogene	predicted gene 15616
5	gene	72.14638	72.14903	positive	MGI_C57BL6J_1924578	C030009O12Rik	NA	NA	unclassified gene	RIKEN cDNA C030009O12 gene
5	gene	72.15658	72.16819	negative	MGI_C57BL6J_1343485	Commd8	NCBI_Gene:27784,ENSEMBL:ENSMUSG00000029213	MGI:1343485	protein coding gene	COMM domain containing 8
5	pseudogene	72.17182	72.17229	negative	MGI_C57BL6J_5662706	Gm42569	ENSEMBL:ENSMUSG00000105016	MGI:5662706	pseudogene	predicted gene 42569
5	pseudogene	72.20333	72.29878	positive	MGI_C57BL6J_2450125	Atp10d	NCBI_Gene:231287,ENSEMBL:ENSMUSG00000046808	MGI:2450125	polymorphic pseudogene	ATPase, class V, type 10D
5	gene	72.29995	72.50454	negative	MGI_C57BL6J_1349451	Corin	NCBI_Gene:53419,ENSEMBL:ENSMUSG00000005220	MGI:1349451	protein coding gene	corin, serine peptidase
5	gene	72.30536	72.30546	negative	MGI_C57BL6J_5455545	Gm25768	ENSEMBL:ENSMUSG00000089195	MGI:5455545	snRNA gene	predicted gene, 25768
5	gene	72.31635	72.36805	positive	MGI_C57BL6J_5313094	Gm20647	ENSEMBL:ENSMUSG00000093400	MGI:5313094	lncRNA gene	predicted gene 20647
5	pseudogene	72.40936	72.40996	positive	MGI_C57BL6J_5011745	Gm19560	NCBI_Gene:102637094,ENSEMBL:ENSMUSG00000093644	MGI:5011745	pseudogene	predicted gene, 19560
5	gene	72.41871	72.41882	negative	MGI_C57BL6J_5453489	Gm23712	ENSEMBL:ENSMUSG00000095112	MGI:5453489	snRNA gene	predicted gene, 23712
5	gene	72.49620	72.49710	negative	MGI_C57BL6J_3034643	AU023070	ENSEMBL:ENSMUSG00000093771	MGI:3034643	lncRNA gene	expressed sequence AU023070
5	gene	72.51330	72.55971	negative	MGI_C57BL6J_1923646	Nfxl1	NCBI_Gene:100978,ENSEMBL:ENSMUSG00000072889	MGI:1923646	protein coding gene	nuclear transcription factor, X-box binding-like 1
5	gene	72.55424	72.55523	negative	MGI_C57BL6J_5663952	Gm43815	ENSEMBL:ENSMUSG00000105510	MGI:5663952	unclassified gene	predicted gene 43815
5	pseudogene	72.56327	72.57256	positive	MGI_C57BL6J_5593303	Gm34144	NCBI_Gene:108169048,ENSEMBL:ENSMUSG00000105865	MGI:5593303	pseudogene	predicted gene, 34144
5	gene	72.57681	72.58136	negative	MGI_C57BL6J_2180337	Zar1	NCBI_Gene:317755,ENSEMBL:ENSMUSG00000063935	MGI:2180337	protein coding gene	zygote arrest 1
5	gene	72.58164	72.58755	negative	MGI_C57BL6J_3645333	Slc10a4l	NCBI_Gene:545758,ENSEMBL:ENSMUSG00000060204	MGI:3645333	protein coding gene	solute carrier family 10 (sodium/bile acid cotransporter family), member 4 like
5	gene	72.60370	72.64427	negative	MGI_C57BL6J_88436	Cnga1	NCBI_Gene:12788,ENSEMBL:ENSMUSG00000067220	MGI:88436	protein coding gene	cyclic nucleotide gated channel alpha 1
5	pseudogene	72.62676	72.62803	negative	MGI_C57BL6J_3646414	Gm5297	NCBI_Gene:384275,ENSEMBL:ENSMUSG00000105124	MGI:3646414	pseudogene	predicted gene 5297
5	gene	72.64229	72.64427	negative	MGI_C57BL6J_1921699	4933408M05Rik	NA	NA	unclassified gene	RIKEN cDNA 4933408M05 gene
5	gene	72.64441	72.64655	positive	MGI_C57BL6J_1921334	4933408A14Rik	ENSEMBL:ENSMUSG00000106136	MGI:1921334	lncRNA gene	RIKEN cDNA 4933408A14 gene
5	gene	72.64780	72.67108	positive	MGI_C57BL6J_1917951	Nipal1	NCBI_Gene:70701,ENSEMBL:ENSMUSG00000067219	MGI:1917951	protein coding gene	NIPA-like domain containing 1
5	gene	72.69598	72.75299	negative	MGI_C57BL6J_102960	Txk	NCBI_Gene:22165,ENSEMBL:ENSMUSG00000054892	MGI:102960	protein coding gene	TXK tyrosine kinase
5	pseudogene	72.72606	72.72637	positive	MGI_C57BL6J_5663854	Gm43717	ENSEMBL:ENSMUSG00000105089	MGI:5663854	pseudogene	predicted gene 43717
5	gene	72.75572	72.86875	negative	MGI_C57BL6J_98662	Tec	NCBI_Gene:21682,ENSEMBL:ENSMUSG00000029217	MGI:98662	protein coding gene	tec protein tyrosine kinase
5	gene	72.80997	72.81207	negative	MGI_C57BL6J_5663636	Gm43499	ENSEMBL:ENSMUSG00000106739	MGI:5663636	unclassified gene	predicted gene 43499
5	pseudogene	72.91259	72.91494	negative	MGI_C57BL6J_3708720	Gm9870	ENSEMBL:ENSMUSG00000052154	MGI:3708720	pseudogene	predicted gene 9870
5	gene	72.91430	72.97884	positive	MGI_C57BL6J_1923241	Slain2	NCBI_Gene:75991,ENSEMBL:ENSMUSG00000036087	MGI:1923241	protein coding gene	SLAIN motif family, member 2
5	gene	72.96581	72.97470	negative	MGI_C57BL6J_3710643	Gm10135	ENSEMBL:ENSMUSG00000063656	MGI:3710643	protein coding gene	predicted gene 10135
5	gene	72.97118	72.97126	negative	MGI_C57BL6J_5454553	Gm24776	ENSEMBL:ENSMUSG00000088268	MGI:5454553	snRNA gene	predicted gene, 24776
5	gene	73.00688	73.01296	positive	MGI_C57BL6J_3606480	Slc10a4	NCBI_Gene:231290,ENSEMBL:ENSMUSG00000029219	MGI:3606480	protein coding gene	solute carrier family 10 (sodium/bile acid cotransporter family), member 4
5	pseudogene	73.01350	73.01737	positive	MGI_C57BL6J_3783237	Gm15847	NCBI_Gene:102637480,ENSEMBL:ENSMUSG00000081849	MGI:3783237	pseudogene	predicted gene 15847
5	gene	73.01520	73.01769	positive	MGI_C57BL6J_5662805	Gm42668	ENSEMBL:ENSMUSG00000107373	MGI:5662805	unclassified gene	predicted gene 42668
5	gene	73.01999	73.25663	negative	MGI_C57BL6J_1919563	Fryl	NCBI_Gene:72313,ENSEMBL:ENSMUSG00000070733	MGI:1919563	protein coding gene	FRY like transcription coactivator
5	gene	73.04178	73.04515	negative	MGI_C57BL6J_5662709	Gm42572	ENSEMBL:ENSMUSG00000107171	MGI:5662709	unclassified gene	predicted gene 42572
5	gene	73.15679	73.15788	positive	MGI_C57BL6J_1920735	1700071G01Rik	NCBI_Gene:73485,ENSEMBL:ENSMUSG00000086376	MGI:1920735	lncRNA gene	RIKEN cDNA 1700071G01 gene
5	gene	73.18795	73.19042	negative	MGI_C57BL6J_5662708	Gm42571	ENSEMBL:ENSMUSG00000107109	MGI:5662708	unclassified gene	predicted gene 42571
5	gene	73.21016	73.21264	negative	MGI_C57BL6J_4938034	Gm17207	ENSEMBL:ENSMUSG00000090561	MGI:4938034	lncRNA gene	predicted gene 17207
5	gene	73.25671	73.27164	positive	MGI_C57BL6J_5593570	Gm34411	NCBI_Gene:108169049,ENSEMBL:ENSMUSG00000107087	MGI:5593570	lncRNA gene	predicted gene, 34411
5	gene	73.26858	73.28419	negative	MGI_C57BL6J_1919526	1700025M24Rik	NCBI_Gene:72276,ENSEMBL:ENSMUSG00000100175	MGI:1919526	lncRNA gene	RIKEN cDNA 1700025M24 gene
5	gene	73.27287	73.27375	positive	MGI_C57BL6J_5662871	Gm42734	ENSEMBL:ENSMUSG00000106999	MGI:5662871	unclassified gene	predicted gene 42734
5	gene	73.28423	73.28754	positive	MGI_C57BL6J_5623201	Gm40316	NCBI_Gene:105244764	MGI:5623201	lncRNA gene	predicted gene, 40316
5	gene	73.29277	73.31408	positive	MGI_C57BL6J_1915345	Ociad1	NCBI_Gene:68095,ENSEMBL:ENSMUSG00000029152	MGI:1915345	protein coding gene	OCIA domain containing 1
5	gene	73.30806	73.30858	negative	MGI_C57BL6J_5662870	Gm42733	ENSEMBL:ENSMUSG00000107292	MGI:5662870	unclassified gene	predicted gene 42733
5	gene	73.31136	73.31256	positive	MGI_C57BL6J_5662869	Gm42732	ENSEMBL:ENSMUSG00000107331	MGI:5662869	unclassified gene	predicted gene 42732
5	gene	73.32220	73.34103	negative	MGI_C57BL6J_1916377	Ociad2	NCBI_Gene:433904,ENSEMBL:ENSMUSG00000029153	MGI:1916377	protein coding gene	OCIA domain containing 2
5	gene	73.34869	73.36377	positive	MGI_C57BL6J_5593655	Gm34496	NCBI_Gene:102637769	MGI:5593655	lncRNA gene	predicted gene, 34496
5	gene	73.37091	73.39278	positive	MGI_C57BL6J_5593742	Gm34583	NCBI_Gene:102637887,ENSEMBL:ENSMUSG00000107272	MGI:5593742	lncRNA gene	predicted gene, 34583
5	pseudogene	73.39680	73.39877	negative	MGI_C57BL6J_5595119	Gm35960	NCBI_Gene:102639712,ENSEMBL:ENSMUSG00000106958	MGI:5595119	pseudogene	predicted gene, 35960
5	gene	73.40605	73.45343	positive	MGI_C57BL6J_2444131	Cwh43	NCBI_Gene:231293,ENSEMBL:ENSMUSG00000029154	MGI:2444131	protein coding gene	cell wall biogenesis 43 C-terminal homolog
5	gene	73.45933	73.45972	negative	MGI_C57BL6J_5663935	Gm43798	ENSEMBL:ENSMUSG00000106675	MGI:5663935	unclassified gene	predicted gene 43798
5	pseudogene	73.47643	73.48102	negative	MGI_C57BL6J_3783097	Gm15653	NCBI_Gene:100862249,ENSEMBL:ENSMUSG00000082039	MGI:3783097	pseudogene	predicted gene 15653
5	gene	73.48100	73.56079	positive	MGI_C57BL6J_2140972	Dcun1d4	NCBI_Gene:100737,ENSEMBL:ENSMUSG00000051674	MGI:2140972	protein coding gene	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
5	gene	73.60664	73.63253	negative	MGI_C57BL6J_2387634	Lrrc66	NCBI_Gene:231296,ENSEMBL:ENSMUSG00000067206	MGI:2387634	protein coding gene	leucine rich repeat containing 66
5	gene	73.63275	73.64779	negative	MGI_C57BL6J_1346523	Sgcb	NCBI_Gene:24051,ENSEMBL:ENSMUSG00000029156	MGI:1346523	protein coding gene	sarcoglycan, beta (dystrophin-associated glycoprotein)
5	gene	73.64701	73.64759	negative	MGI_C57BL6J_5663936	Gm43799	ENSEMBL:ENSMUSG00000106773	MGI:5663936	unclassified gene	predicted gene 43799
5	gene	73.65098	73.65247	negative	MGI_C57BL6J_5594061	Gm34902	NCBI_Gene:102638308	MGI:5594061	lncRNA gene	predicted gene, 34902
5	gene	73.65136	73.67951	positive	MGI_C57BL6J_1920722	Spata18	NCBI_Gene:73472,ENSEMBL:ENSMUSG00000029155	MGI:1920722	protein coding gene	spermatogenesis associated 18
5	gene	73.79752	73.80467	negative	MGI_C57BL6J_5594119	Gm34960	NCBI_Gene:102638380	MGI:5594119	lncRNA gene	predicted gene, 34960
5	gene	73.91289	73.92042	positive	MGI_C57BL6J_1916652	1700019F05Rik	NCBI_Gene:69402,ENSEMBL:ENSMUSG00000107027	MGI:1916652	lncRNA gene	RIKEN cDNA 1700019F05 gene
5	gene	73.94638	73.94838	positive	MGI_C57BL6J_2141303	C78283	ENSEMBL:ENSMUSG00000106968	MGI:2141303	lncRNA gene	expressed sequence C78283
5	gene	73.99845	74.06843	negative	MGI_C57BL6J_1916977	Usp46	NCBI_Gene:69727,ENSEMBL:ENSMUSG00000054814	MGI:1916977	protein coding gene	ubiquitin specific peptidase 46
5	gene	74.01338	74.02968	positive	MGI_C57BL6J_1921549	Usp46os1	NCBI_Gene:102634340,ENSEMBL:ENSMUSG00000087250	MGI:1921549	antisense lncRNA gene	ubiquitin specific peptidase 46, opposite strand 1
5	gene	74.03227	74.04328	positive	MGI_C57BL6J_1924246	Usp46os2	NCBI_Gene:108169050,ENSEMBL:ENSMUSG00000086234	MGI:1924246	lncRNA gene	ubiquitin specific peptidase 46, opposite strand 2
5	gene	74.04830	74.05351	negative	MGI_C57BL6J_5663554	Gm43417	ENSEMBL:ENSMUSG00000106993	MGI:5663554	unclassified gene	predicted gene 43417
5	gene	74.06004	74.06079	positive	MGI_C57BL6J_5663552	Gm43415	ENSEMBL:ENSMUSG00000106973	MGI:5663552	unclassified gene	predicted gene 43415
5	gene	74.09214	74.09315	negative	MGI_C57BL6J_5663553	Gm43416	ENSEMBL:ENSMUSG00000107255	MGI:5663553	unclassified gene	predicted gene 43416
5	gene	74.09306	74.09541	positive	MGI_C57BL6J_1917286	Dancr	NCBI_Gene:70036,ENSEMBL:ENSMUSG00000106943	MGI:1917286	lncRNA gene	differentiation antagonizing non-protein coding RNA
5	gene	74.09353	74.09365	positive	MGI_C57BL6J_3819495	Snora26	NCBI_Gene:100313943,ENSEMBL:ENSMUSG00000093355	MGI:3819495	snoRNA gene	small nucleolar RNA, H/ACA box 26
5	gene	74.16068	74.16528	positive	MGI_C57BL6J_5591161	Gm32002	NCBI_Gene:102634417	MGI:5591161	lncRNA gene	predicted gene, 32002
5	gene	74.17216	74.17605	negative	MGI_C57BL6J_2442263	A330058E17Rik	ENSEMBL:ENSMUSG00000106735	MGI:2442263	unclassified gene	RIKEN cDNA A330058E17 gene
5	gene	74.19529	74.19948	positive	MGI_C57BL6J_1916189	Rasl11b	NCBI_Gene:68939,ENSEMBL:ENSMUSG00000049907	MGI:1916189	protein coding gene	RAS-like, family 11, member B
5	gene	74.20482	74.53176	negative	MGI_C57BL6J_2443446	Scfd2	NCBI_Gene:212986,ENSEMBL:ENSMUSG00000062110	MGI:2443446	protein coding gene	Sec1 family domain containing 2
5	gene	74.24915	74.24962	negative	MGI_C57BL6J_5662736	Gm42599	ENSEMBL:ENSMUSG00000107209	MGI:5662736	unclassified gene	predicted gene 42599
5	gene	74.30933	74.35967	positive	MGI_C57BL6J_5591223	Gm32064	NCBI_Gene:102634496	MGI:5591223	lncRNA gene	predicted gene, 32064
5	pseudogene	74.31658	74.31703	negative	MGI_C57BL6J_3801723	Gm15981	ENSEMBL:ENSMUSG00000080700	MGI:3801723	pseudogene	predicted gene 15981
5	pseudogene	74.35658	74.35842	negative	MGI_C57BL6J_3801722	Gm15982	ENSEMBL:ENSMUSG00000084132	MGI:3801722	pseudogene	predicted gene 15982
5	gene	74.36716	74.36992	negative	MGI_C57BL6J_1925146	6720475M21Rik	ENSEMBL:ENSMUSG00000107009	MGI:1925146	unclassified gene	RIKEN cDNA 6720475M21 gene
5	gene	74.42950	74.43111	negative	MGI_C57BL6J_5663304	Gm43167	ENSEMBL:ENSMUSG00000106992	MGI:5663304	unclassified gene	predicted gene 43167
5	gene	74.53535	74.59880	positive	MGI_C57BL6J_1914149	Fip1l1	NCBI_Gene:66899,ENSEMBL:ENSMUSG00000029227	MGI:1914149	protein coding gene	FIP1 like 1 (S. cerevisiae)
5	gene	74.57595	74.57728	positive	MGI_C57BL6J_5663884	Gm43747	ENSEMBL:ENSMUSG00000107165	MGI:5663884	unclassified gene	predicted gene 43747
5	gene	74.59245	74.70295	negative	MGI_C57BL6J_1278335	Lnx1	NCBI_Gene:16924,ENSEMBL:ENSMUSG00000029228	MGI:1278335	protein coding gene	ligand of numb-protein X 1
5	gene	74.64764	74.65834	positive	MGI_C57BL6J_5591463	Gm32304	NCBI_Gene:102634806	MGI:5591463	lncRNA gene	predicted gene, 32304
5	gene	74.70245	74.72861	positive	MGI_C57BL6J_3802050	Gm15984	NCBI_Gene:102634697,ENSEMBL:ENSMUSG00000085657	MGI:3802050	lncRNA gene	predicted gene 15984
5	gene	74.73152	74.73445	negative	MGI_C57BL6J_3801786	Gm15985	ENSEMBL:ENSMUSG00000085497	MGI:3801786	lncRNA gene	predicted gene 15985
5	gene	74.74988	74.75444	positive	MGI_C57BL6J_5662712	Gm42575	ENSEMBL:ENSMUSG00000106987	MGI:5662712	lncRNA gene	predicted gene 42575
5	pseudogene	74.88334	74.88424	positive	MGI_C57BL6J_5010091	Gm17906	NCBI_Gene:100416075,ENSEMBL:ENSMUSG00000106806	MGI:5010091	pseudogene	predicted gene, 17906
5	gene	74.94919	74.96637	positive	MGI_C57BL6J_3644088	Gm6116	NCBI_Gene:619945,ENSEMBL:ENSMUSG00000072874	MGI:3644088	lncRNA gene	predicted gene 6116
5	gene	74.98586	74.98907	negative	MGI_C57BL6J_5662714	Gm42577	ENSEMBL:ENSMUSG00000107306	MGI:5662714	unclassified gene	predicted gene 42577
5	gene	74.99799	75.04477	negative	MGI_C57BL6J_1921527	Chic2	NCBI_Gene:74277,ENSEMBL:ENSMUSG00000029229	MGI:1921527	protein coding gene	cysteine-rich hydrophobic domain 2
5	gene	74.99976	75.00350	negative	MGI_C57BL6J_2444073	B930098A02Rik	NA	NA	unclassified gene	RIKEN cDNA B930098A02 gene
5	gene	75.02024	75.02308	negative	MGI_C57BL6J_5662713	Gm42576	ENSEMBL:ENSMUSG00000107205	MGI:5662713	unclassified gene	predicted gene 42576
5	pseudogene	75.04848	75.05004	positive	MGI_C57BL6J_5010778	Gm18593	NCBI_Gene:100417406,ENSEMBL:ENSMUSG00000107162	MGI:5010778	pseudogene	predicted gene, 18593
5	gene	75.07560	75.07789	positive	MGI_C57BL6J_95843	Gsx2	NCBI_Gene:14843,ENSEMBL:ENSMUSG00000035946	MGI:95843	protein coding gene	GS homeobox 2
5	pseudogene	75.10863	75.10905	positive	MGI_C57BL6J_3780209	Gm2040	NCBI_Gene:100039083,ENSEMBL:ENSMUSG00000106900	MGI:3780209	pseudogene	predicted gene 2040
5	gene	75.11032	75.14711	positive	MGI_C57BL6J_5011768	Gm19583	NCBI_Gene:100503184,ENSEMBL:ENSMUSG00000107192	MGI:5011768	lncRNA gene	predicted gene, 19583
5	pseudogene	75.14135	75.14156	negative	MGI_C57BL6J_3031235	Olfr1401-ps1	NCBI_Gene:404510,ENSEMBL:ENSMUSG00000107258	MGI:3031235	pseudogene	olfactory receptor 1401, pseudogene 1
5	gene	75.15140	75.19822	positive	MGI_C57BL6J_97530	Pdgfra	NCBI_Gene:18595,ENSEMBL:ENSMUSG00000029231	MGI:97530	protein coding gene	platelet derived growth factor receptor, alpha polypeptide
5	gene	75.15305	75.15365	negative	MGI_C57BL6J_5662939	Gm42802	ENSEMBL:ENSMUSG00000106760	MGI:5662939	lncRNA gene	predicted gene 42802
5	gene	75.15488	75.15533	negative	MGI_C57BL6J_5662940	Gm42803	ENSEMBL:ENSMUSG00000107245	MGI:5662940	unclassified gene	predicted gene 42803
5	gene	75.17683	75.17690	positive	MGI_C57BL6J_5531242	Mir7025	miRBase:MI0022874,NCBI_Gene:102465620,ENSEMBL:ENSMUSG00000099060	MGI:5531242	miRNA gene	microRNA 7025
5	pseudogene	75.24644	75.24677	positive	MGI_C57BL6J_5662936	Gm42799	ENSEMBL:ENSMUSG00000106704	MGI:5662936	pseudogene	predicted gene 42799
5	pseudogene	75.34238	75.34383	positive	MGI_C57BL6J_5010530	Gm18345	NCBI_Gene:100416976,ENSEMBL:ENSMUSG00000106689	MGI:5010530	pseudogene	predicted gene, 18345
5	gene	75.37204	75.37215	negative	MGI_C57BL6J_5451861	Gm22084	ENSEMBL:ENSMUSG00000088210	MGI:5451861	snRNA gene	predicted gene, 22084
5	gene	75.38778	75.39937	negative	MGI_C57BL6J_5662937	Gm42800	ENSEMBL:ENSMUSG00000107386	MGI:5662937	lncRNA gene	predicted gene 42800
5	gene	75.56105	75.56115	negative	MGI_C57BL6J_5454279	Gm24502	ENSEMBL:ENSMUSG00000089078	MGI:5454279	snRNA gene	predicted gene, 24502
5	gene	75.57492	75.65672	positive	MGI_C57BL6J_96677	Kit	NCBI_Gene:16590,ENSEMBL:ENSMUSG00000005672	MGI:96677	protein coding gene	KIT proto-oncogene receptor tyrosine kinase
5	gene	75.67525	75.68820	positive	MGI_C57BL6J_5591717	Gm32558	NCBI_Gene:102635146	MGI:5591717	lncRNA gene	predicted gene, 32558
5	gene	75.72760	75.73597	positive	MGI_C57BL6J_5663238	Gm43101	ENSEMBL:ENSMUSG00000106754	MGI:5663238	lncRNA gene	predicted gene 43101
5	gene	75.73788	75.74021	positive	MGI_C57BL6J_5663239	Gm43102	ENSEMBL:ENSMUSG00000107251	MGI:5663239	unclassified gene	predicted gene 43102
5	gene	75.75356	75.75889	negative	MGI_C57BL6J_5663237	Gm43100	ENSEMBL:ENSMUSG00000106726	MGI:5663237	lncRNA gene	predicted gene 43100
5	gene	75.83303	75.83564	negative	MGI_C57BL6J_5011775	Gm19590	ENSEMBL:ENSMUSG00000107061	MGI:5011775	lncRNA gene	predicted gene, 19590
5	gene	75.84609	75.84821	positive	MGI_C57BL6J_5611408	Gm38180	ENSEMBL:ENSMUSG00000103684	MGI:5611408	unclassified gene	predicted gene, 38180
5	gene	75.84924	75.85296	negative	MGI_C57BL6J_5579571	Gm28865	ENSEMBL:ENSMUSG00000100936	MGI:5579571	lncRNA gene	predicted gene 28865
5	gene	75.90983	75.90993	positive	MGI_C57BL6J_5455151	Gm25374	ENSEMBL:ENSMUSG00000088783	MGI:5455151	miRNA gene	predicted gene, 25374
5	gene	75.93283	75.97907	negative	MGI_C57BL6J_96683	Kdr	NCBI_Gene:16542,ENSEMBL:ENSMUSG00000062960	MGI:96683	protein coding gene	kinase insert domain protein receptor
5	gene	75.97450	76.01321	positive	MGI_C57BL6J_5591886	Gm32727	NCBI_Gene:102635370	MGI:5591886	lncRNA gene	predicted gene, 32727
5	gene	76.00632	76.00644	negative	MGI_C57BL6J_5454515	Gm24738	ENSEMBL:ENSMUSG00000089481	MGI:5454515	rRNA gene	predicted gene, 24738
5	gene	76.04310	76.05837	positive	MGI_C57BL6J_5591939	Gm32780	NCBI_Gene:102635444,ENSEMBL:ENSMUSG00000106756	MGI:5591939	lncRNA gene	predicted gene, 32780
5	pseudogene	76.06023	76.06080	negative	MGI_C57BL6J_3645584	Gm6051	NCBI_Gene:606516,ENSEMBL:ENSMUSG00000107020	MGI:3645584	pseudogene	predicted gene 6051
5	gene	76.14027	76.15550	positive	MGI_C57BL6J_1930252	Srd5a3	NCBI_Gene:57357,ENSEMBL:ENSMUSG00000029233	MGI:1930252	protein coding gene	steroid 5 alpha-reductase 3
5	gene	76.14184	76.14768	negative	MGI_C57BL6J_5592991	Gm33832	NCBI_Gene:102636882	MGI:5592991	lncRNA gene	predicted gene, 33832
5	gene	76.15826	76.16922	negative	MGI_C57BL6J_5593097	Gm33938	NCBI_Gene:102637026	MGI:5593097	lncRNA gene	predicted gene, 33938
5	gene	76.18388	76.20924	positive	MGI_C57BL6J_894407	Tmem165	NCBI_Gene:21982,ENSEMBL:ENSMUSG00000029234	MGI:894407	protein coding gene	transmembrane protein 165
5	pseudogene	76.19662	76.19791	positive	MGI_C57BL6J_1930261	Apc-ps1	NCBI_Gene:79189,ENSEMBL:ENSMUSG00000083152	MGI:1930261	pseudogene	adenomatosis polyposis coli, pseudogene 1
5	gene	76.20987	76.30500	negative	MGI_C57BL6J_99698	Clock	NCBI_Gene:12753,ENSEMBL:ENSMUSG00000029238	MGI:99698	protein coding gene	circadian locomotor output cycles kaput
5	pseudogene	76.23189	76.23310	negative	MGI_C57BL6J_894296	Ube2n-ps1	NCBI_Gene:12067,ENSEMBL:ENSMUSG00000106831	MGI:894296	pseudogene	ubiquitin-conjugating enzyme E2N, pseudogene 1
5	gene	76.29760	76.30178	negative	MGI_C57BL6J_5663795	Gm43658	ENSEMBL:ENSMUSG00000106815	MGI:5663795	unclassified gene	predicted gene 43658
5	gene	76.30488	76.30553	positive	MGI_C57BL6J_3648350	Gm7467	NCBI_Gene:665055,ENSEMBL:ENSMUSG00000098449	MGI:3648350	lncRNA gene	predicted gene 7467
5	gene	76.31212	76.33116	negative	MGI_C57BL6J_1890655	Pdcl2	NCBI_Gene:79455,ENSEMBL:ENSMUSG00000029235	MGI:1890655	protein coding gene	phosducin-like 2
5	gene	76.33124	76.34189	positive	MGI_C57BL6J_1921871	4930432L08Rik	NCBI_Gene:74621,ENSEMBL:ENSMUSG00000087037	MGI:1921871	lncRNA gene	RIKEN cDNA 4930432L08 gene
5	gene	76.33349	76.36379	negative	MGI_C57BL6J_1860476	Nmu	NCBI_Gene:56183,ENSEMBL:ENSMUSG00000029236	MGI:1860476	protein coding gene	neuromedin U
5	gene	76.34259	76.34773	positive	MGI_C57BL6J_5593334	Gm34175	NCBI_Gene:102637337	MGI:5593334	lncRNA gene	predicted gene, 34175
5	pseudogene	76.41035	76.41051	positive	MGI_C57BL6J_5662803	Gm42666	ENSEMBL:ENSMUSG00000107160	MGI:5662803	pseudogene	predicted gene 42666
5	pseudogene	76.45070	76.45177	negative	MGI_C57BL6J_5662802	Gm42665	ENSEMBL:ENSMUSG00000106982	MGI:5662802	pseudogene	predicted gene 42665
5	gene	76.48404	76.51665	positive	MGI_C57BL6J_3647743	Gm7271	NCBI_Gene:639545,ENSEMBL:ENSMUSG00000091204	MGI:3647743	protein coding gene	predicted gene 7271
5	gene	76.52931	76.57030	positive	MGI_C57BL6J_2445020	Exoc1	NCBI_Gene:69940,ENSEMBL:ENSMUSG00000036435	MGI:2445020	protein coding gene	exocyst complex component 1
5	gene	76.58723	76.64647	positive	MGI_C57BL6J_2681869	Cep135	NCBI_Gene:381644,ENSEMBL:ENSMUSG00000036403	MGI:2681869	protein coding gene	centrosomal protein 135
5	gene	76.65537	76.65842	negative	MGI_C57BL6J_2443970	A730089K16Rik	NCBI_Gene:320411,ENSEMBL:ENSMUSG00000103529	MGI:2443970	unclassified gene	RIKEN cDNA A730089K16 gene
5	gene	76.65651	76.87355	positive	MGI_C57BL6J_2444817	C530008M17Rik	NCBI_Gene:320827,ENSEMBL:ENSMUSG00000036377	MGI:2444817	protein coding gene	RIKEN cDNA C530008M17 gene
5	gene	76.65768	76.65911	positive	MGI_C57BL6J_3711274	Gm10430	NA	NA	protein coding gene	predicted gene 10430
5	pseudogene	76.74207	76.74251	negative	MGI_C57BL6J_3643474	Gm7494	ENSEMBL:ENSMUSG00000083874	MGI:3643474	pseudogene	predicted gene 7494
5	gene	76.77479	76.77741	negative	MGI_C57BL6J_5593528	Gm34369	NCBI_Gene:102637602	MGI:5593528	lncRNA gene	predicted gene, 34369
5	gene	76.87366	76.90552	negative	MGI_C57BL6J_2442517	Aasdh	NCBI_Gene:231326,ENSEMBL:ENSMUSG00000055923	MGI:2442517	protein coding gene	aminoadipate-semialdehyde dehydrogenase
5	gene	76.91325	76.95158	negative	MGI_C57BL6J_2387203	Ppat	NCBI_Gene:231327,ENSEMBL:ENSMUSG00000029246	MGI:2387203	protein coding gene	phosphoribosyl pyrophosphate amidotransferase
5	gene	76.92837	76.94776	positive	MGI_C57BL6J_1917534	2310040G07Rik	ENSEMBL:ENSMUSG00000072852	MGI:1917534	lncRNA gene	RIKEN cDNA 2310040G07 gene
5	gene	76.93152	76.93815	positive	MGI_C57BL6J_5624987	Gm42102	NCBI_Gene:105246904	MGI:5624987	protein coding gene	predicted gene, 42102
5	gene	76.95131	76.96751	positive	MGI_C57BL6J_1914304	Paics	NCBI_Gene:67054,ENSEMBL:ENSMUSG00000029247	MGI:1914304	protein coding gene	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
5	gene	76.97468	76.99994	positive	MGI_C57BL6J_1333795	Srp72	NCBI_Gene:66661,ENSEMBL:ENSMUSG00000036323	MGI:1333795	protein coding gene	signal recognition particle 72
5	gene	77.00227	77.01096	positive	MGI_C57BL6J_1915496	Arl9	NCBI_Gene:384185,ENSEMBL:ENSMUSG00000063820	MGI:1915496	protein coding gene	ADP-ribosylation factor-like 9
5	gene	77.00644	77.01886	negative	MGI_C57BL6J_3696786	1700112J05Rik	NCBI_Gene:68246,ENSEMBL:ENSMUSG00000086632	MGI:3696786	lncRNA gene	RIKEN cDNA 1700112J05 gene
5	gene	77.01602	77.06154	positive	MGI_C57BL6J_1919118	Thegl	NCBI_Gene:71868,ENSEMBL:ENSMUSG00000029248	MGI:1919118	protein coding gene	theg spermatid protein like
5	gene	77.08699	77.11512	negative	MGI_C57BL6J_1916782	Hopx	NCBI_Gene:74318,ENSEMBL:ENSMUSG00000059325	MGI:1916782	protein coding gene	HOP homeobox
5	gene	77.09453	77.10231	positive	MGI_C57BL6J_3801917	Hopxos	NCBI_Gene:102637820,ENSEMBL:ENSMUSG00000087541	MGI:3801917	antisense lncRNA gene	HOP homeobox, opposite strand
5	gene	77.10209	77.10535	negative	MGI_C57BL6J_5295665	Gm20558	NA	NA	unclassified gene	predicted gene%2c 20558
5	gene	77.11553	77.12245	negative	MGI_C57BL6J_3801916	Gm15831	NCBI_Gene:105246907,ENSEMBL:ENSMUSG00000085858	MGI:3801916	lncRNA gene	predicted gene 15831
5	gene	77.13662	77.14031	negative	MGI_C57BL6J_5624990	Chaer1	NCBI_Gene:105246908,ENSEMBL:ENSMUSG00000106783	MGI:5624990	lncRNA gene	cardiac hypertrophy associated epigenetic regulator 1
5	gene	77.14610	77.15917	negative	MGI_C57BL6J_5593757	Gm34598	NCBI_Gene:102637902	MGI:5593757	lncRNA gene	predicted gene, 34598
5	gene	77.20511	77.21626	negative	MGI_C57BL6J_1917232	Spink2	NCBI_Gene:69982,ENSEMBL:ENSMUSG00000053030	MGI:1917232	protein coding gene	serine peptidase inhibitor, Kazal type 2
5	pseudogene	77.22728	77.22795	positive	MGI_C57BL6J_5011245	Gm19060	NCBI_Gene:100418183,ENSEMBL:ENSMUSG00000107034	MGI:5011245	pseudogene	predicted gene, 19060
5	gene	77.26549	77.28643	positive	MGI_C57BL6J_104897	Rest	NCBI_Gene:19712,ENSEMBL:ENSMUSG00000029249	MGI:104897	protein coding gene	RE1-silencing transcription factor
5	gene	77.27276	77.27284	positive	MGI_C57BL6J_4950415	Mir5098	miRBase:MI0018006,NCBI_Gene:100628577,ENSEMBL:ENSMUSG00000093061	MGI:4950415	miRNA gene	microRNA 5098
5	gene	77.29417	77.31029	negative	MGI_C57BL6J_1914306	Noa1	NCBI_Gene:56412,ENSEMBL:ENSMUSG00000036285	MGI:1914306	protein coding gene	nitric oxide associated 1
5	gene	77.31015	77.34933	positive	MGI_C57BL6J_2388280	Polr2b	NCBI_Gene:231329,ENSEMBL:ENSMUSG00000029250	MGI:2388280	protein coding gene	polymerase (RNA) II (DNA directed) polypeptide B
5	pseudogene	77.31866	77.31894	positive	MGI_C57BL6J_5662895	Gm42758	ENSEMBL:ENSMUSG00000107238	MGI:5662895	pseudogene	predicted gene 42758
5	gene	77.34924	77.40805	negative	MGI_C57BL6J_1352480	Igfbp7	NCBI_Gene:29817,ENSEMBL:ENSMUSG00000036256	MGI:1352480	protein coding gene	insulin-like growth factor binding protein 7
5	gene	77.38349	77.40499	positive	MGI_C57BL6J_5593807	Gm34648	NCBI_Gene:102637968,ENSEMBL:ENSMUSG00000106828	MGI:5593807	lncRNA gene	predicted gene, 34648
5	gene	77.43372	77.47322	positive	MGI_C57BL6J_5593887	Gm34728	NCBI_Gene:108169051,ENSEMBL:ENSMUSG00000106906	MGI:5593887	lncRNA gene	predicted gene, 34728
5	gene	77.46549	77.46886	positive	MGI_C57BL6J_1916620	1700017L05Rik	NCBI_Gene:69370,ENSEMBL:ENSMUSG00000107232	MGI:1916620	lncRNA gene	RIKEN cDNA 1700017L05 gene
5	gene	77.48573	77.49436	positive	MGI_C57BL6J_5662898	Gm42761	ENSEMBL:ENSMUSG00000106985	MGI:5662898	lncRNA gene	predicted gene 42761
5	pseudogene	77.51004	77.51175	negative	MGI_C57BL6J_3525016	Pea15b	NCBI_Gene:231332,ENSEMBL:ENSMUSG00000047652	MGI:3525016	pseudogene	phosphoprotein enriched in astrocytes 15B
5	gene	77.66972	77.66985	negative	MGI_C57BL6J_5451788	Gm22011	ENSEMBL:ENSMUSG00000089415	MGI:5451788	snoRNA gene	predicted gene, 22011
5	pseudogene	77.68110	77.68922	positive	MGI_C57BL6J_5590208	Gm31049	NCBI_Gene:102633147,ENSEMBL:ENSMUSG00000106996	MGI:5590208	pseudogene	predicted gene, 31049
5	pseudogene	77.90912	77.90946	negative	MGI_C57BL6J_5662810	Gm42673	ENSEMBL:ENSMUSG00000106960	MGI:5662810	pseudogene	predicted gene 42673
5	gene	77.93379	77.94902	positive	MGI_C57BL6J_5594071	Gm34912	NCBI_Gene:102638320	MGI:5594071	lncRNA gene	predicted gene, 34912
5	pseudogene	78.47388	78.47513	positive	MGI_C57BL6J_2384077	Mthfr-ps1	NCBI_Gene:387594,ENSEMBL:ENSMUSG00000044058	MGI:2384077	pseudogene	5,10-methylenetetrahydrofolate reductase, pseudogene 1
5	pseudogene	78.54053	78.54089	positive	MGI_C57BL6J_5663369	Gm43232	ENSEMBL:ENSMUSG00000107309	MGI:5663369	pseudogene	predicted gene 43232
5	gene	78.77986	78.77999	positive	MGI_C57BL6J_5455533	Gm25756	ENSEMBL:ENSMUSG00000077178	MGI:5455533	snoRNA gene	predicted gene, 25756
5	pseudogene	79.44020	79.44021	positive	MGI_C57BL6J_5663371	Gm43234	ENSEMBL:ENSMUSG00000107308	MGI:5663371	pseudogene	predicted gene 43234
5	pseudogene	79.50740	79.50851	positive	MGI_C57BL6J_5010637	Gm18452	NCBI_Gene:100417208,ENSEMBL:ENSMUSG00000107183	MGI:5010637	pseudogene	predicted gene, 18452
5	gene	79.63881	79.63911	negative	MGI_C57BL6J_5452330	Gm22553	ENSEMBL:ENSMUSG00000088422	MGI:5452330	unclassified non-coding RNA gene	predicted gene, 22553
5	gene	79.75038	79.75053	negative	MGI_C57BL6J_5453206	Gm23429	ENSEMBL:ENSMUSG00000084435	MGI:5453206	snRNA gene	predicted gene, 23429
5	pseudogene	79.81065	79.81170	negative	MGI_C57BL6J_5826575	Gm46938	NCBI_Gene:108169110	MGI:5826575	pseudogene	predicted gene, 46938
5	gene	80.09891	80.09901	positive	MGI_C57BL6J_5454081	Gm24304	ENSEMBL:ENSMUSG00000095594	MGI:5454081	snRNA gene	predicted gene, 24304
5	gene	80.89365	80.89376	positive	MGI_C57BL6J_5452751	Gm22974	ENSEMBL:ENSMUSG00000065235	MGI:5452751	snRNA gene	predicted gene, 22974
5	pseudogene	80.90063	80.90166	negative	MGI_C57BL6J_3780369	Gm2199	NCBI_Gene:100039384,ENSEMBL:ENSMUSG00000083829	MGI:3780369	pseudogene	predicted gene 2199
5	pseudogene	81.01359	81.01423	positive	MGI_C57BL6J_5010819	Gm18634	NCBI_Gene:100417477	MGI:5010819	pseudogene	predicted gene, 18634
5	gene	81.01956	81.82783	positive	MGI_C57BL6J_2441950	Adgrl3	NCBI_Gene:319387,ENSEMBL:ENSMUSG00000037605	MGI:2441950	protein coding gene	adhesion G protein-coupled receptor L3
5	gene	81.24925	81.25269	positive	MGI_C57BL6J_5663731	Gm43594	ENSEMBL:ENSMUSG00000107226	MGI:5663731	unclassified gene	predicted gene 43594
5	gene	81.51403	81.51814	positive	MGI_C57BL6J_2443791	A230055J12Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA A230055J12 gene
5	gene	81.53573	81.53667	positive	MGI_C57BL6J_5663221	Gm43084	ENSEMBL:ENSMUSG00000107375	MGI:5663221	unclassified gene	predicted gene 43084
5	gene	81.62806	81.62884	negative	MGI_C57BL6J_5826583	Gm46946	NCBI_Gene:108169123	MGI:5826583	lncRNA gene	predicted gene, 46946
5	gene	81.73593	81.73601	positive	MGI_C57BL6J_5451825	Gm22048	ENSEMBL:ENSMUSG00000106611	MGI:5451825	miRNA gene	predicted gene, 22048
5	gene	81.79191	81.79843	negative	MGI_C57BL6J_3801819	Gm16054	ENSEMBL:ENSMUSG00000087431	MGI:3801819	lncRNA gene	predicted gene 16054
5	gene	81.82682	81.82782	positive	MGI_C57BL6J_1920293	2900064F13Rik	ENSEMBL:ENSMUSG00000106746	MGI:1920293	unclassified gene	RIKEN cDNA 2900064F13 gene
5	gene	82.11968	82.12136	negative	MGI_C57BL6J_1913575	1700008H02Rik	ENSEMBL:ENSMUSG00000106860	MGI:1913575	unclassified gene	RIKEN cDNA 1700008H02 gene
5	gene	82.12241	82.12471	negative	MGI_C57BL6J_1914577	1700031L13Rik	NCBI_Gene:67327,ENSEMBL:ENSMUSG00000099863	MGI:1914577	lncRNA gene	RIKEN cDNA 1700031L13 gene
5	pseudogene	82.33685	82.33772	positive	MGI_C57BL6J_3644615	Rpl7-ps7	NCBI_Gene:433912,ENSEMBL:ENSMUSG00000106926	MGI:3644615	pseudogene	ribosomal protein L7, pseudogene 7
5	gene	82.79894	82.79906	negative	MGI_C57BL6J_3783361	Mir1187	miRBase:MI0006285,NCBI_Gene:100316803,ENSEMBL:ENSMUSG00000080586	MGI:3783361	miRNA gene	microRNA 1187
5	gene	82.80376	82.80386	positive	MGI_C57BL6J_5453906	Gm24129	ENSEMBL:ENSMUSG00000089162	MGI:5453906	snRNA gene	predicted gene, 24129
5	pseudogene	83.04063	83.04103	negative	MGI_C57BL6J_5663354	Gm43217	NCBI_Gene:108169111,ENSEMBL:ENSMUSG00000106606	MGI:5663354	pseudogene	predicted gene 43217
5	gene	83.27812	83.35519	negative	MGI_C57BL6J_2444966	Tecrl	NCBI_Gene:243078,ENSEMBL:ENSMUSG00000049537	MGI:2444966	protein coding gene	trans-2,3-enoyl-CoA reductase-like
5	pseudogene	83.29958	83.30045	negative	MGI_C57BL6J_3783070	Gm15626	ENSEMBL:ENSMUSG00000081822	MGI:3783070	pseudogene	predicted gene 15626
5	gene	83.46479	83.46488	positive	MGI_C57BL6J_5690695	Gm44303	ENSEMBL:ENSMUSG00000104537	MGI:5690695	miRNA gene	predicted gene, 44303
5	gene	83.64882	83.64895	negative	MGI_C57BL6J_5455542	Gm25765	ENSEMBL:ENSMUSG00000077288	MGI:5455542	snoRNA gene	predicted gene, 25765
5	gene	83.69000	83.69012	negative	MGI_C57BL6J_5455583	Gm25806	ENSEMBL:ENSMUSG00000084731	MGI:5455583	snRNA gene	predicted gene, 25806
5	gene	83.72346	83.72359	negative	MGI_C57BL6J_5454569	Gm24792	ENSEMBL:ENSMUSG00000077474	MGI:5454569	snoRNA gene	predicted gene, 24792
5	pseudogene	83.72859	83.72916	positive	MGI_C57BL6J_3780507	Gm2337	NCBI_Gene:100039608	MGI:3780507	pseudogene	predicted gene 2337
5	pseudogene	83.86316	83.86375	positive	MGI_C57BL6J_3646530	Gm4866	NCBI_Gene:231368,ENSEMBL:ENSMUSG00000106576	MGI:3646530	pseudogene	predicted gene 4866
5	gene	84.05476	84.41782	negative	MGI_C57BL6J_99654	Epha5	NCBI_Gene:13839,ENSEMBL:ENSMUSG00000029245	MGI:99654	protein coding gene	Eph receptor A5
5	pseudogene	84.12322	84.12439	positive	MGI_C57BL6J_3783162	Hmgn2-ps1	NCBI_Gene:100039489,ENSEMBL:ENSMUSG00000079067	MGI:3783162	pseudogene	high mobility group nucleosomal binding domain 2, pseudogene 1
5	gene	84.41753	84.46695	positive	MGI_C57BL6J_5625048	Gm42163	NCBI_Gene:105246975	MGI:5625048	lncRNA gene	predicted gene, 42163
5	gene	84.42880	84.43262	positive	MGI_C57BL6J_5663669	Gm43532	ENSEMBL:ENSMUSG00000106598	MGI:5663669	lncRNA gene	predicted gene 43532
5	pseudogene	84.61871	84.61982	positive	MGI_C57BL6J_5663668	Gm43531	ENSEMBL:ENSMUSG00000105658	MGI:5663668	pseudogene	predicted gene 43531
5	pseudogene	84.80732	84.80833	negative	MGI_C57BL6J_5012289	Gm20104	NCBI_Gene:100504189	MGI:5012289	pseudogene	predicted gene, 20104
5	pseudogene	84.86190	84.86690	negative	MGI_C57BL6J_5434361	Gm21006	NCBI_Gene:100526665,ENSEMBL:ENSMUSG00000106389	MGI:5434361	pseudogene	predicted gene, 21006
5	gene	85.70614	85.71082	positive	MGI_C57BL6J_5594410	Gm35251	NCBI_Gene:102638766	MGI:5594410	lncRNA gene	predicted gene, 35251
5	gene	85.72077	85.72275	positive	MGI_C57BL6J_5663704	Gm43567	ENSEMBL:ENSMUSG00000104878	MGI:5663704	lncRNA gene	predicted gene 43567
5	gene	85.82963	85.82979	positive	MGI_C57BL6J_5454403	Gm24626	ENSEMBL:ENSMUSG00000064555	MGI:5454403	snRNA gene	predicted gene, 24626
5	pseudogene	86.00541	86.00562	negative	MGI_C57BL6J_5663701	Gm43564	ENSEMBL:ENSMUSG00000106225	MGI:5663701	pseudogene	predicted gene 43564
5	gene	86.01202	86.06601	negative	MGI_C57BL6J_99700	Cenpc1	NCBI_Gene:12617,ENSEMBL:ENSMUSG00000029253	MGI:99700	protein coding gene	centromere protein C1
5	pseudogene	86.06676	86.06789	positive	MGI_C57BL6J_3780458	Gm2287	ENSEMBL:ENSMUSG00000106282	MGI:3780458	pseudogene	predicted gene 2287
5	gene	86.07158	86.10613	positive	MGI_C57BL6J_1926193	Stap1	NCBI_Gene:56792,ENSEMBL:ENSMUSG00000029254	MGI:1926193	protein coding gene	signal transducing adaptor family member 1
5	gene	86.07977	86.07994	positive	MGI_C57BL6J_5454301	Gm24524	ENSEMBL:ENSMUSG00000064859	MGI:5454301	snRNA gene	predicted gene, 24524
5	gene	86.10929	86.17280	negative	MGI_C57BL6J_1913894	Uba6	NCBI_Gene:231380,ENSEMBL:ENSMUSG00000035898	MGI:1913894	protein coding gene	ubiquitin-like modifier activating enzyme 6
5	gene	86.18075	86.19790	negative	MGI_C57BL6J_95790	Gnrhr	NCBI_Gene:14715,ENSEMBL:ENSMUSG00000029255	MGI:95790	protein coding gene	gonadotropin releasing hormone receptor
5	gene	86.23148	86.28931	negative	MGI_C57BL6J_3521861	Tmprss11c	NCBI_Gene:435845,ENSEMBL:ENSMUSG00000061184	MGI:3521861	protein coding gene	transmembrane protease, serine 11c
5	gene	86.23686	86.23696	negative	MGI_C57BL6J_5455250	Gm25473	ENSEMBL:ENSMUSG00000094833	MGI:5455250	snRNA gene	predicted gene, 25473
5	gene	86.30222	86.37342	negative	MGI_C57BL6J_2385221	Tmprss11d	NCBI_Gene:231382,ENSEMBL:ENSMUSG00000061259	MGI:2385221	protein coding gene	transmembrane protease, serine 11d
5	gene	86.34404	86.39681	positive	MGI_C57BL6J_5594526	Gm35367	NCBI_Gene:102638923	MGI:5594526	lncRNA gene	predicted gene, 35367
5	gene	86.41041	86.46918	negative	MGI_C57BL6J_2684853	Tmprss11a	NCBI_Gene:194597,ENSEMBL:ENSMUSG00000072845	MGI:2684853	protein coding gene	transmembrane protease, serine 11a
5	gene	86.48588	86.51860	negative	MGI_C57BL6J_2444058	Tmprss11g	NCBI_Gene:320454,ENSEMBL:ENSMUSG00000079451	MGI:2444058	protein coding gene	transmembrane protease, serine 11g
5	gene	86.52123	86.63242	negative	MGI_C57BL6J_2442348	Tmprss11f	NCBI_Gene:243083,ENSEMBL:ENSMUSG00000048764	MGI:2442348	protein coding gene	transmembrane protease, serine 11f
5	gene	86.65763	86.67636	negative	MGI_C57BL6J_2442893	Tmprss11b	NCBI_Gene:319875,ENSEMBL:ENSMUSG00000035861	MGI:2442893	protein coding gene	transmembrane protease, serine 11B
5	gene	86.68385	86.68664	negative	MGI_C57BL6J_5663193	Gm43056	ENSEMBL:ENSMUSG00000106507	MGI:5663193	lncRNA gene	predicted gene 43056
5	gene	86.70519	86.74581	negative	MGI_C57BL6J_3513175	Tmprss11e	NCBI_Gene:243084,ENSEMBL:ENSMUSG00000054537	MGI:3513175	protein coding gene	transmembrane protease, serine 11e
5	gene	86.72890	86.75974	positive	MGI_C57BL6J_4414999	Gm16579	ENSEMBL:ENSMUSG00000089851	MGI:4414999	lncRNA gene	predicted gene 16579
5	gene	86.72891	86.81711	positive	MGI_C57BL6J_5663192	Gm43055	ENSEMBL:ENSMUSG00000105704	MGI:5663192	lncRNA gene	predicted gene 43055
5	gene	86.76714	86.78303	negative	MGI_C57BL6J_5663194	Gm43057	ENSEMBL:ENSMUSG00000104937	MGI:5663194	lncRNA gene	predicted gene 43057
5	gene	86.80398	86.83666	positive	MGI_C57BL6J_2443713	Ythdc1	NCBI_Gene:231386,ENSEMBL:ENSMUSG00000035851	MGI:2443713	protein coding gene	YTH domain containing 1
5	pseudogene	86.86034	86.86351	negative	MGI_C57BL6J_5434816	Gm21461	NCBI_Gene:100862082,ENSEMBL:ENSMUSG00000105309	MGI:5434816	pseudogene	predicted gene, 21461
5	gene	86.88977	86.90694	negative	MGI_C57BL6J_2140962	Ugt2b34	NCBI_Gene:100727,ENSEMBL:ENSMUSG00000029260	MGI:2140962	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide B34
5	gene	86.91622	86.91632	negative	MGI_C57BL6J_5454988	Gm25211	ENSEMBL:ENSMUSG00000096303	MGI:5454988	snRNA gene	predicted gene, 25211
5	gene	86.91664	86.92653	negative	MGI_C57BL6J_1919023	Ugt2b1	NCBI_Gene:71773,ENSEMBL:ENSMUSG00000035836	MGI:1919023	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide B1
5	gene	86.92890	86.92901	negative	MGI_C57BL6J_5453898	Gm24121	ENSEMBL:ENSMUSG00000075983	MGI:5453898	snRNA gene	predicted gene, 24121
5	pseudogene	86.95972	86.96193	negative	MGI_C57BL6J_5012306	Gm20121	NCBI_Gene:108169052,ENSEMBL:ENSMUSG00000104798	MGI:5012306	pseudogene	predicted gene, 20121
5	pseudogene	86.97674	86.99178	positive	MGI_C57BL6J_3644524	Gm7631	NCBI_Gene:665424,ENSEMBL:ENSMUSG00000106185	MGI:3644524	pseudogene	predicted gene 7631
5	pseudogene	86.99709	86.99841	positive	MGI_C57BL6J_3648808	Gm5869	NCBI_Gene:545767,ENSEMBL:ENSMUSG00000104802	MGI:3648808	pseudogene	predicted gene 5869
5	gene	87.00086	87.01327	positive	MGI_C57BL6J_3576100	Ugt2b35	NCBI_Gene:243085,ENSEMBL:ENSMUSG00000035811	MGI:3576100	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide B35
5	pseudogene	87.01415	87.01522	positive	MGI_C57BL6J_5010820	Gm18635	NCBI_Gene:100417478,ENSEMBL:ENSMUSG00000105315	MGI:5010820	pseudogene	predicted gene, 18635
5	pseudogene	87.05460	87.05567	negative	MGI_C57BL6J_5662602	Gm42465	ENSEMBL:ENSMUSG00000106003	MGI:5662602	pseudogene	predicted gene 42465
5	gene	87.06593	87.09256	negative	MGI_C57BL6J_3576103	Ugt2b36	NCBI_Gene:231396,ENSEMBL:ENSMUSG00000070704	MGI:3576103	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide B36
5	pseudogene	87.09716	87.10095	negative	MGI_C57BL6J_5590389	Gm31230	NCBI_Gene:102633395,ENSEMBL:ENSMUSG00000105625	MGI:5590389	pseudogene	predicted gene, 31230
5	pseudogene	87.11453	87.11461	negative	MGI_C57BL6J_5662932	Gm42795	ENSEMBL:ENSMUSG00000106502	MGI:5662932	pseudogene	predicted gene 42795
5	gene	87.12495	87.14034	negative	MGI_C57BL6J_98900	Ugt2b5	NCBI_Gene:22238,ENSEMBL:ENSMUSG00000054630	MGI:98900	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide B5
5	pseudogene	87.16228	87.17529	negative	MGI_C57BL6J_3649128	Gm5717	NCBI_Gene:435848,ENSEMBL:ENSMUSG00000106111	MGI:3649128	pseudogene	predicted gene 5717
5	pseudogene	87.19162	87.19317	negative	MGI_C57BL6J_5663506	Gm43369	ENSEMBL:ENSMUSG00000106330	MGI:5663506	pseudogene	predicted gene 43369
5	pseudogene	87.19162	87.21811	negative	MGI_C57BL6J_5011603	Gm19418	NCBI_Gene:100502858,ENSEMBL:ENSMUSG00000105240	MGI:5011603	pseudogene	predicted gene, 19418
5	gene	87.24049	87.25480	negative	MGI_C57BL6J_2148239	Ugt2b37	NCBI_Gene:112417,ENSEMBL:ENSMUSG00000057425	MGI:2148239	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide B37
5	pseudogene	87.29014	87.31182	negative	MGI_C57BL6J_3646880	Gm7646	NCBI_Gene:665468,ENSEMBL:ENSMUSG00000105897	MGI:3646880	pseudogene	predicted gene 7646
5	gene	87.32497	87.33719	negative	MGI_C57BL6J_1919344	Ugt2a3	NCBI_Gene:72094,ENSEMBL:ENSMUSG00000035780	MGI:1919344	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide A3
5	pseudogene	87.35093	87.36492	negative	MGI_C57BL6J_3643731	Gm7652	NCBI_Gene:102639104,ENSEMBL:ENSMUSG00000106303	MGI:3643731	pseudogene	predicted gene 7652
5	gene	87.35583	87.35692	positive	MGI_C57BL6J_5662933	Gm42796	ENSEMBL:ENSMUSG00000105192	MGI:5662933	unclassified gene	predicted gene 42796
5	pseudogene	87.36879	87.37262	negative	MGI_C57BL6J_5594729	Gm35570	NCBI_Gene:102639210,ENSEMBL:ENSMUSG00000104664	MGI:5594729	pseudogene	predicted gene, 35570
5	pseudogene	87.37616	87.37992	negative	MGI_C57BL6J_5434404	Gm21049	NCBI_Gene:100534381,ENSEMBL:ENSMUSG00000106397	MGI:5434404	pseudogene	predicted gene, 21049
5	pseudogene	87.39206	87.40037	negative	MGI_C57BL6J_3780606	Gm2439	NCBI_Gene:100039818	MGI:3780606	pseudogene	predicted gene 2439
5	pseudogene	87.40132	87.40298	negative	MGI_C57BL6J_5663507	Gm43370	ENSEMBL:ENSMUSG00000106132	MGI:5663507	pseudogene	predicted gene 43370
5	gene	87.40994	87.42420	negative	MGI_C57BL6J_2140794	Ugt2b38	NCBI_Gene:100559,ENSEMBL:ENSMUSG00000061906	MGI:2140794	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide B38
5	gene	87.45949	87.48226	negative	MGI_C57BL6J_3576095	Ugt2a2	NCBI_Gene:552899,ENSEMBL:ENSMUSG00000029268	MGI:3576095	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide A2
5	gene	87.45949	87.49087	negative	MGI_C57BL6J_2149905	Ugt2a1	NCBI_Gene:94215,ENSEMBL:ENSMUSG00000106677	MGI:2149905	protein coding gene	UDP glucuronosyltransferase 2 family, polypeptide A1
5	gene	87.46024	87.48681	negative	MGI_C57BL6J_5663775	Gm43638	ENSEMBL:ENSMUSG00000107180	MGI:5663775	protein coding gene	predicted gene 43638
5	gene	87.51334	87.53820	negative	MGI_C57BL6J_2136282	Sult1b1	NCBI_Gene:56362,ENSEMBL:ENSMUSG00000029269	MGI:2136282	protein coding gene	sulfotransferase family 1B, member 1
5	gene	87.55464	87.56903	negative	MGI_C57BL6J_1926341	Sult1d1	NCBI_Gene:53315,ENSEMBL:ENSMUSG00000029273	MGI:1926341	protein coding gene	sulfotransferase family 1D, member 1
5	gene	87.57597	87.59161	negative	MGI_C57BL6J_98431	Sult1e1	NCBI_Gene:20860,ENSEMBL:ENSMUSG00000029272	MGI:98431	protein coding gene	sulfotransferase family 1E, member 1
5	gene	87.59590	87.59599	negative	MGI_C57BL6J_4950408	Mir3969	miRBase:MI0016978,NCBI_Gene:100628573,ENSEMBL:ENSMUSG00000106074	MGI:4950408	miRNA gene	microRNA 3969
5	pseudogene	87.60107	87.60148	positive	MGI_C57BL6J_5663505	Gm43368	ENSEMBL:ENSMUSG00000106217	MGI:5663505	pseudogene	predicted gene 43368
5	pseudogene	87.60370	87.60563	positive	MGI_C57BL6J_5434398	Gm21043	NCBI_Gene:100534363,ENSEMBL:ENSMUSG00000105246	MGI:5434398	pseudogene	predicted gene, 21043
5	gene	87.66621	87.68258	positive	MGI_C57BL6J_88540	Csn1s1	NCBI_Gene:12990,ENSEMBL:ENSMUSG00000070702	MGI:88540	protein coding gene	casein alpha s1
5	gene	87.69262	87.69963	negative	MGI_C57BL6J_88541	Csn2	NCBI_Gene:12991,ENSEMBL:ENSMUSG00000063157	MGI:88541	protein coding gene	casein beta
5	gene	87.73353	87.73365	positive	MGI_C57BL6J_5454843	Gm25066	ENSEMBL:ENSMUSG00000094386	MGI:5454843	snoRNA gene	predicted gene, 25066
5	pseudogene	87.73711	87.73721	negative	MGI_C57BL6J_5662982	Gm42845	ENSEMBL:ENSMUSG00000105796	MGI:5662982	pseudogene	predicted gene 42845
5	gene	87.76468	87.76480	negative	MGI_C57BL6J_5454091	Gm24314	ENSEMBL:ENSMUSG00000095333	MGI:5454091	snoRNA gene	predicted gene, 24314
5	gene	87.77445	87.78880	positive	MGI_C57BL6J_88542	Csn1s2a	NCBI_Gene:12993,ENSEMBL:ENSMUSG00000061937	MGI:88542	protein coding gene	casein alpha s2-like A
5	gene	87.80808	87.82443	positive	MGI_C57BL6J_105312	Csn1s2b	NCBI_Gene:12992,ENSEMBL:ENSMUSG00000061388	MGI:105312	protein coding gene	casein alpha s2-like B
5	gene	87.82569	87.84639	positive	MGI_C57BL6J_1921029	Prr27	NCBI_Gene:73779,ENSEMBL:ENSMUSG00000002240	MGI:1921029	protein coding gene	proline rich 27
5	gene	87.83989	87.84342	negative	MGI_C57BL6J_5662931	Gm42794	ENSEMBL:ENSMUSG00000104839	MGI:5662931	lncRNA gene	predicted gene 42794
5	pseudogene	87.85036	87.85301	positive	MGI_C57BL6J_3646689	Gm7337	NCBI_Gene:654494,ENSEMBL:ENSMUSG00000067156	MGI:3646689	pseudogene	predicted gene 7337
5	gene	87.88502	87.89423	positive	MGI_C57BL6J_1916842	Odam	NCBI_Gene:69592,ENSEMBL:ENSMUSG00000009580	MGI:1916842	protein coding gene	odontogenic, ameloblast asssociated
5	gene	87.90858	87.97935	negative	MGI_C57BL6J_1920721	1700066N21Rik	NCBI_Gene:73471,ENSEMBL:ENSMUSG00000099605	MGI:1920721	lncRNA gene	RIKEN cDNA 1700066N21 gene
5	gene	87.90878	87.91417	positive	MGI_C57BL6J_3512757	BC037156	NCBI_Gene:494497,ENSEMBL:ENSMUSG00000105888	MGI:3512757	lncRNA gene	cDNA sequence BC037156
5	gene	87.92557	87.93267	positive	MGI_C57BL6J_107461	Csn3	NCBI_Gene:12994,ENSEMBL:ENSMUSG00000001622	MGI:107461	protein coding gene	casein kappa
5	gene	87.95762	87.96635	positive	MGI_C57BL6J_2670982	BC051076	NCBI_Gene:243090,ENSEMBL:ENSMUSG00000055961	MGI:2670982	lncRNA gene	cDNA sequence BC051076
5	gene	87.96946	87.97287	positive	MGI_C57BL6J_1921498	2310003L06Rik	ENSEMBL:ENSMUSG00000007457	MGI:1921498	protein coding gene	RIKEN cDNA 2310003L06 gene
5	gene	87.96952	88.00828	positive	MGI_C57BL6J_5579140	Gm28434	ENSEMBL:ENSMUSG00000100704	MGI:5579140	protein coding gene	predicted gene 28434
5	gene	87.97944	87.98154	positive	MGI_C57BL6J_1918227	Cabs1	NCBI_Gene:70977,ENSEMBL:ENSMUSG00000007907	MGI:1918227	protein coding gene	calcium binding protein, spermatid specific 1
5	gene	87.99156	88.00853	positive	MGI_C57BL6J_102763	Smr3a	NCBI_Gene:20599,ENSEMBL:ENSMUSG00000029280	MGI:102763	protein coding gene	submaxillary gland androgen regulated protein 3A
5	pseudogene	88.06251	88.06437	positive	MGI_C57BL6J_3646978	Gm7709	NCBI_Gene:665603,ENSEMBL:ENSMUSG00000105905	MGI:3646978	pseudogene	predicted gene 7709
5	pseudogene	88.07095	88.07132	positive	MGI_C57BL6J_5662760	Gm42623	ENSEMBL:ENSMUSG00000104640	MGI:5662760	pseudogene	predicted gene 42623
5	gene	88.08656	88.10905	positive	MGI_C57BL6J_102762	Smr2	NCBI_Gene:20600,ENSEMBL:ENSMUSG00000029281	MGI:102762	protein coding gene	submaxillary gland androgen regulated protein 2
5	gene	88.11057	88.11153	negative	MGI_C57BL6J_3779368	Gm11116	ENSEMBL:ENSMUSG00000079439	MGI:3779368	protein coding gene	predicted gene 11116
5	pseudogene	88.14470	88.14506	positive	MGI_C57BL6J_5662759	Gm42622	ENSEMBL:ENSMUSG00000105807	MGI:5662759	pseudogene	predicted gene 42622
5	gene	88.15402	88.15410	negative	MGI_C57BL6J_3779367	Gm11115	ENSEMBL:ENSMUSG00000079438	MGI:3779367	protein coding gene	predicted gene 11115
5	pseudogene	88.19699	88.20141	positive	MGI_C57BL6J_5662758	Gm42621	ENSEMBL:ENSMUSG00000106065	MGI:5662758	pseudogene	predicted gene 42621
5	pseudogene	88.21066	88.21104	positive	MGI_C57BL6J_5625049	Gm42164	ENSEMBL:ENSMUSG00000105576	MGI:5625049	pseudogene	predicted gene, 42164
5	pseudogene	88.23125	88.23334	positive	MGI_C57BL6J_3779657	Gm7048	NCBI_Gene:630942,ENSEMBL:ENSMUSG00000106593	MGI:3779657	pseudogene	predicted gene 7048
5	gene	88.26892	88.28284	positive	MGI_C57BL6J_3646267	Gm7714	NCBI_Gene:665615,ENSEMBL:ENSMUSG00000090302	MGI:3646267	protein coding gene	predicted gene 7714
5	gene	88.29136	88.30102	negative	MGI_C57BL6J_1920562	1700041A01Rik	NCBI_Gene:73312	MGI:1920562	lncRNA gene	RIKEN cDNA 1700041A01 gene
5	gene	88.31731	88.32882	positive	MGI_C57BL6J_107496	Prol1	NCBI_Gene:17830,ENSEMBL:ENSMUSG00000064156	MGI:107496	protein coding gene	proline rich, lacrimal 1
5	gene	88.37611	88.38592	positive	MGI_C57BL6J_1918671	Amtn	NCBI_Gene:71421,ENSEMBL:ENSMUSG00000029282	MGI:1918671	protein coding gene	amelotin
5	pseudogene	88.42321	88.42355	positive	MGI_C57BL6J_5663568	Gm43431	ENSEMBL:ENSMUSG00000106633	MGI:5663568	pseudogene	predicted gene 43431
5	pseudogene	88.42781	88.42836	positive	MGI_C57BL6J_3644419	Gm7721	NCBI_Gene:665631,ENSEMBL:ENSMUSG00000105013	MGI:3644419	pseudogene	predicted gene 7721
5	gene	88.45599	88.46853	positive	MGI_C57BL6J_104655	Ambn	NCBI_Gene:11698,ENSEMBL:ENSMUSG00000029288	MGI:104655	protein coding gene	ameloblastin
5	gene	88.48798	88.50605	positive	MGI_C57BL6J_1333772	Enam	NCBI_Gene:13801,ENSEMBL:ENSMUSG00000029286	MGI:1333772	protein coding gene	enamelin
5	gene	88.51981	88.52790	negative	MGI_C57BL6J_96493	Jchain	NCBI_Gene:16069,ENSEMBL:ENSMUSG00000067149	MGI:96493	protein coding gene	immunoglobulin joining chain
5	pseudogene	88.54504	88.54516	negative	MGI_C57BL6J_5663569	Gm43432	ENSEMBL:ENSMUSG00000106322	MGI:5663569	pseudogene	predicted gene 43432
5	gene	88.55446	88.55609	positive	MGI_C57BL6J_1919230	Utp3	NCBI_Gene:65961,ENSEMBL:ENSMUSG00000070697	MGI:1919230	protein coding gene	UTP3 small subunit processome component
5	gene	88.56344	88.56486	negative	MGI_C57BL6J_5624992	Gm42107	NCBI_Gene:105246910	MGI:5624992	lncRNA gene	predicted gene, 42107
5	gene	88.56479	88.65142	positive	MGI_C57BL6J_106484	Rufy3	NCBI_Gene:52822,ENSEMBL:ENSMUSG00000029291	MGI:106484	protein coding gene	RUN and FYVE domain containing 3
5	gene	88.65923	88.67617	negative	MGI_C57BL6J_106479	Grsf1	NCBI_Gene:231413,ENSEMBL:ENSMUSG00000044221	MGI:106479	protein coding gene	G-rich RNA sequence binding factor 1
5	gene	88.72086	88.76422	positive	MGI_C57BL6J_1915723	Mob1b	NCBI_Gene:68473,ENSEMBL:ENSMUSG00000006262	MGI:1915723	protein coding gene	MOB kinase activator 1B
5	pseudogene	88.73922	88.74017	negative	MGI_C57BL6J_3783124	Gm15682	NCBI_Gene:108169053,ENSEMBL:ENSMUSG00000095524	MGI:3783124	pseudogene	predicted gene 15682
5	gene	88.76500	88.78328	positive	MGI_C57BL6J_102726	Dck	NCBI_Gene:13178,ENSEMBL:ENSMUSG00000029366	MGI:102726	protein coding gene	deoxycytidine kinase
5	gene	88.79390	88.81347	positive	MGI_C57BL6J_5663049	Gm42912	ENSEMBL:ENSMUSG00000105640	MGI:5663049	lncRNA gene	predicted gene 42912
5	gene	88.79390	89.23966	positive	MGI_C57BL6J_1927555	Slc4a4	NCBI_Gene:54403,ENSEMBL:ENSMUSG00000060961	MGI:1927555	protein coding gene	solute carrier family 4 (anion exchanger), member 4
5	pseudogene	88.80359	88.80522	negative	MGI_C57BL6J_5663048	Gm42911	ENSEMBL:ENSMUSG00000106305	MGI:5663048	pseudogene	predicted gene 42911
5	pseudogene	88.83780	88.83940	negative	MGI_C57BL6J_2663191	Mkrn1-ps1	NCBI_Gene:353327,ENSEMBL:ENSMUSG00000082389	MGI:2663191	pseudogene	makorin, ring finger protein 1, pseudogene 1
5	gene	89.22174	89.22393	negative	MGI_C57BL6J_5595014	Gm35855	NCBI_Gene:102639575	MGI:5595014	lncRNA gene	predicted gene, 35855
5	gene	89.41751	89.45790	negative	MGI_C57BL6J_95669	Gc	NCBI_Gene:14473,ENSEMBL:ENSMUSG00000035540	MGI:95669	protein coding gene	vitamin D binding protein
5	pseudogene	89.49909	89.50006	negative	MGI_C57BL6J_3646411	Gm6366	NCBI_Gene:622870,ENSEMBL:ENSMUSG00000106534	MGI:3646411	pseudogene	predicted gene 6366
5	gene	89.52286	89.52500	positive	MGI_C57BL6J_5663652	Gm43515	ENSEMBL:ENSMUSG00000104715	MGI:5663652	unclassified gene	predicted gene 43515
5	gene	89.52698	89.58391	positive	MGI_C57BL6J_1860130	Npffr2	NCBI_Gene:104443,ENSEMBL:ENSMUSG00000035528	MGI:1860130	protein coding gene	neuropeptide FF receptor 2
5	gene	89.61644	89.62261	positive	MGI_C57BL6J_3779661	Gm7056	NCBI_Gene:631105	MGI:3779661	lncRNA gene	predicted gene 7056
5	gene	89.67384	89.88367	negative	MGI_C57BL6J_3045353	Adamts3	NCBI_Gene:330119,ENSEMBL:ENSMUSG00000043635	MGI:3045353	protein coding gene	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
5	gene	89.68192	89.68224	positive	MGI_C57BL6J_5455097	Gm25320	ENSEMBL:ENSMUSG00000084500	MGI:5455097	unclassified non-coding RNA gene	predicted gene, 25320
5	pseudogene	89.68933	89.69034	negative	MGI_C57BL6J_5625047	Gm42162	NCBI_Gene:105246974	MGI:5625047	pseudogene	predicted gene, 42162
5	gene	89.75976	89.76396	negative	MGI_C57BL6J_3642469	D130050E23Rik	NA	NA	unclassified gene	RIKEN cDNA D130050E23 gene
5	gene	89.82887	89.82900	positive	MGI_C57BL6J_5455535	Gm25758	ENSEMBL:ENSMUSG00000077175	MGI:5455535	snoRNA gene	predicted gene, 25758
5	pseudogene	90.13217	90.13330	positive	MGI_C57BL6J_3643585	Eif5al3-ps	NCBI_Gene:665733,ENSEMBL:ENSMUSG00000043618	MGI:3643585	pseudogene	eukaryotic translation initiation factor 5A-like 3, pseudogene
5	gene	90.19330	90.20036	positive	MGI_C57BL6J_5595095	Gm35936	NCBI_Gene:102639681	MGI:5595095	lncRNA gene	predicted gene, 35936
5	gene	90.21472	90.22400	negative	MGI_C57BL6J_2448532	Cox18	NCBI_Gene:231430,ENSEMBL:ENSMUSG00000035505	MGI:2448532	protein coding gene	cytochrome c oxidase assembly protein 18
5	gene	90.22717	90.36658	negative	MGI_C57BL6J_1932101	Ankrd17	NCBI_Gene:81702,ENSEMBL:ENSMUSG00000055204	MGI:1932101	protein coding gene	ankyrin repeat domain 17
5	gene	90.32760	90.33151	negative	MGI_C57BL6J_2141033	AU017193	NA	NA	unclassified gene	expressed sequence AU017193
5	gene	90.36662	90.36849	positive	MGI_C57BL6J_3641866	Gm9958	NCBI_Gene:791294,ENSEMBL:ENSMUSG00000054945	MGI:3641866	lncRNA gene	predicted gene 9958
5	gene	90.37774	90.37904	negative	MGI_C57BL6J_3642470	Gm10426	NA	NA	protein coding gene	predicted gene 10426
5	gene	90.39727	90.39992	positive	MGI_C57BL6J_5663500	Gm43363	ENSEMBL:ENSMUSG00000106725	MGI:5663500	unclassified gene	predicted gene 43363
5	gene	90.41439	90.43869	positive	MGI_C57BL6J_5595158	Gm35999	NCBI_Gene:102639766	MGI:5595158	lncRNA gene	predicted gene, 35999
5	gene	90.46087	90.47660	positive	MGI_C57BL6J_87991	Alb	NCBI_Gene:11657,ENSEMBL:ENSMUSG00000029368	MGI:87991	protein coding gene	albumin
5	gene	90.49071	90.50891	positive	MGI_C57BL6J_87951	Afp	NCBI_Gene:11576,ENSEMBL:ENSMUSG00000054932	MGI:87951	protein coding gene	alpha fetoprotein
5	gene	90.49909	90.51593	negative	MGI_C57BL6J_5663586	Gm43449	ENSEMBL:ENSMUSG00000106788	MGI:5663586	lncRNA gene	predicted gene 43449
5	gene	90.51893	90.55354	positive	MGI_C57BL6J_2429409	Afm	NCBI_Gene:280662,ENSEMBL:ENSMUSG00000029369	MGI:2429409	protein coding gene	afamin
5	gene	90.55320	90.58908	negative	MGI_C57BL6J_5624994	Gm42109	NCBI_Gene:105246912,ENSEMBL:ENSMUSG00000106863	MGI:5624994	lncRNA gene	predicted gene, 42109
5	pseudogene	90.55885	90.55942	positive	MGI_C57BL6J_3780770	Gm2602	NCBI_Gene:100040105,ENSEMBL:ENSMUSG00000106705	MGI:3780770	pseudogene	predicted gene 2602
5	gene	90.56063	90.59813	positive	MGI_C57BL6J_1923342	Albfm1	NCBI_Gene:622307,ENSEMBL:ENSMUSG00000070690	MGI:1923342	protein coding gene	albumin superfamily member 1
5	gene	90.60308	90.64074	negative	MGI_C57BL6J_1920496	Rassf6	NCBI_Gene:73246,ENSEMBL:ENSMUSG00000029370	MGI:1920496	protein coding gene	Ras association (RalGDS/AF-6) domain family member 6
5	gene	90.71499	90.72930	positive	MGI_C57BL6J_5595243	Gm36084	NCBI_Gene:102639875	MGI:5595243	lncRNA gene	predicted gene, 36084
5	pseudogene	90.75052	90.75084	positive	MGI_C57BL6J_5663227	Gm43090	ENSEMBL:ENSMUSG00000107072	MGI:5663227	pseudogene	predicted gene 43090
5	gene	90.75930	90.76162	positive	MGI_C57BL6J_1096868	Cxcl5	NCBI_Gene:20311,ENSEMBL:ENSMUSG00000029371	MGI:1096868	protein coding gene	chemokine (C-X-C motif) ligand 5
5	gene	90.76852	90.77006	positive	MGI_C57BL6J_1888712	Ppbp	NCBI_Gene:57349,ENSEMBL:ENSMUSG00000029372	MGI:1888712	protein coding gene	pro-platelet basic protein
5	gene	90.77244	90.77338	positive	MGI_C57BL6J_1888711	Pf4	NCBI_Gene:56744,ENSEMBL:ENSMUSG00000029373	MGI:1888711	protein coding gene	platelet factor 4
5	gene	90.78610	90.78960	positive	MGI_C57BL6J_3037818	Cxcl3	NCBI_Gene:330122,ENSEMBL:ENSMUSG00000029379	MGI:3037818	protein coding gene	chemokine (C-X-C motif) ligand 3
5	gene	90.79453	90.80307	positive	MGI_C57BL6J_1339941	Cxcl15	NCBI_Gene:20309,ENSEMBL:ENSMUSG00000029375	MGI:1339941	protein coding gene	chemokine (C-X-C motif) ligand 15
5	gene	90.79619	90.79626	negative	MGI_C57BL6J_5454099	Gm24322	ENSEMBL:ENSMUSG00000093082	MGI:5454099	miRNA gene	predicted gene, 24322
5	gene	90.80326	90.80639	positive	MGI_C57BL6J_5663222	Gm43085	ENSEMBL:ENSMUSG00000106957	MGI:5663222	unclassified gene	predicted gene 43085
5	gene	90.83233	90.83595	positive	MGI_C57BL6J_5663223	Gm43086	ENSEMBL:ENSMUSG00000107044	MGI:5663223	lncRNA gene	predicted gene 43086
5	gene	90.89124	90.89312	positive	MGI_C57BL6J_108068	Cxcl1	NCBI_Gene:14825,ENSEMBL:ENSMUSG00000029380	MGI:108068	protein coding gene	chemokine (C-X-C motif) ligand 1
5	gene	90.89338	90.89350	positive	MGI_C57BL6J_5452593	Gm22816	ENSEMBL:ENSMUSG00000088075	MGI:5452593	rRNA gene	predicted gene, 22816
5	gene	90.90387	90.90594	positive	MGI_C57BL6J_1340094	Cxcl2	NCBI_Gene:20310,ENSEMBL:ENSMUSG00000058427	MGI:1340094	protein coding gene	chemokine (C-X-C motif) ligand 2
5	gene	90.92273	90.92490	positive	MGI_C57BL6J_5662667	Gm42530	ENSEMBL:ENSMUSG00000107218	MGI:5662667	lncRNA gene	predicted gene 42530
5	gene	90.93112	91.02137	positive	MGI_C57BL6J_1915871	Mthfd2l	NCBI_Gene:665563,ENSEMBL:ENSMUSG00000029376	MGI:1915871	protein coding gene	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
5	gene	90.93416	90.93769	positive	MGI_C57BL6J_2444460	E330024J20Rik	NA	NA	unclassified gene	RIKEN cDNA E330024J20 gene
5	gene	91.02746	91.03521	positive	MGI_C57BL6J_1919170	Epgn	NCBI_Gene:71920,ENSEMBL:ENSMUSG00000035020	MGI:1919170	protein coding gene	epithelial mitogen
5	gene	91.05127	91.07477	negative	MGI_C57BL6J_5011795	Gm19610	NCBI_Gene:102639958,ENSEMBL:ENSMUSG00000107350	MGI:5011795	lncRNA gene	predicted gene, 19610
5	gene	91.07462	91.09365	positive	MGI_C57BL6J_107508	Ereg	NCBI_Gene:13874,ENSEMBL:ENSMUSG00000029377	MGI:107508	protein coding gene	epiregulin
5	gene	91.13960	91.14843	positive	MGI_C57BL6J_88068	Areg	NCBI_Gene:11839,ENSEMBL:ENSMUSG00000029378	MGI:88068	protein coding gene	amphiregulin
5	gene	91.20938	91.21084	positive	MGI_C57BL6J_1921978	5033428C03Rik	NA	NA	unclassified gene	RIKEN cDNA 5033428C03 gene
5	gene	91.21790	91.21800	negative	MGI_C57BL6J_5452869	Gm23092	ENSEMBL:ENSMUSG00000094938	MGI:5452869	snRNA gene	predicted gene, 23092
5	gene	91.25757	91.28342	negative	MGI_C57BL6J_5011804	Gm19619	NCBI_Gene:100503265,ENSEMBL:ENSMUSG00000107198	MGI:5011804	lncRNA gene	predicted gene, 19619
5	gene	91.35726	91.40299	negative	MGI_C57BL6J_99439	Btc	NCBI_Gene:12223,ENSEMBL:ENSMUSG00000082361	MGI:99439	protein coding gene	betacellulin, epidermal growth factor family member
5	gene	91.42431	91.44989	negative	MGI_C57BL6J_5624995	Gm42110	NCBI_Gene:105246913	MGI:5624995	lncRNA gene	predicted gene, 42110
5	gene	91.51762	91.62689	positive	MGI_C57BL6J_2443349	Parm1	NCBI_Gene:231440,ENSEMBL:ENSMUSG00000034981	MGI:2443349	protein coding gene	prostate androgen-regulated mucin-like protein 1
5	gene	91.70846	91.73337	positive	MGI_C57BL6J_5595381	Gm36222	NCBI_Gene:102640065	MGI:5595381	lncRNA gene	predicted gene, 36222
5	pseudogene	91.73753	91.73811	negative	MGI_C57BL6J_3643840	Trmt112-ps1	NCBI_Gene:665860,ENSEMBL:ENSMUSG00000107261	MGI:3643840	pseudogene	tRNA methyltransferase 11-2, pseudogene 1
5	pseudogene	91.76022	91.76168	negative	MGI_C57BL6J_3779767	Gm7832	NCBI_Gene:665864,ENSEMBL:ENSMUSG00000106917	MGI:3779767	pseudogene	predicted gene 7832
5	gene	91.76332	91.76791	negative	MGI_C57BL6J_5578977	Gm28271	ENSEMBL:ENSMUSG00000099468	MGI:5578977	lncRNA gene	predicted gene 28271
5	gene	91.76624	91.76730	negative	MGI_C57BL6J_1920702	1700063O14Rik	NCBI_Gene:73452,ENSEMBL:ENSMUSG00000101978	MGI:1920702	lncRNA gene	RIKEN cDNA 1700063O14 gene
5	pseudogene	91.78606	91.78744	negative	MGI_C57BL6J_5011834	Gm19649	NCBI_Gene:100503348,ENSEMBL:ENSMUSG00000106712	MGI:5011834	pseudogene	predicted gene, 19649
5	pseudogene	91.78860	91.78948	positive	MGI_C57BL6J_5663733	Gm43596	ENSEMBL:ENSMUSG00000107337	MGI:5663733	pseudogene	predicted gene 43596
5	pseudogene	91.80638	91.80711	negative	MGI_C57BL6J_3644616	Gm5558	NCBI_Gene:433914,ENSEMBL:ENSMUSG00000096726	MGI:3644616	pseudogene	predicted gene 5558
5	gene	91.83138	91.85095	negative	MGI_C57BL6J_5595462	Gm36303	NCBI_Gene:102640174	MGI:5595462	lncRNA gene	predicted gene, 36303
5	gene	91.86174	91.90975	positive	MGI_C57BL6J_5595516	Gm36357	NCBI_Gene:102640243	MGI:5595516	lncRNA gene	predicted gene, 36357
5	gene	91.91140	91.91340	negative	MGI_C57BL6J_1925304	4930570G05Rik	NA	NA	lncRNA gene	RIKEN cDNA 4930570G05 gene
5	gene	91.91140	91.91340	negative	MGI_C57BL6J_5663825	Gm43688	ENSEMBL:ENSMUSG00000107301	MGI:5663825	lncRNA gene	predicted gene 43688
5	gene	91.94884	91.96322	negative	MGI_C57BL6J_1915348	Rchy1	NCBI_Gene:68098,ENSEMBL:ENSMUSG00000029397	MGI:1915348	protein coding gene	ring finger and CHY zinc finger domain containing 1
5	gene	91.95800	91.95896	negative	MGI_C57BL6J_5663176	Gm43039	ENSEMBL:ENSMUSG00000107200	MGI:5663176	unclassified gene	predicted gene 43039
5	pseudogene	91.96239	91.97214	positive	MGI_C57BL6J_1922436	Thap6	NCBI_Gene:381650,ENSEMBL:ENSMUSG00000102644	MGI:1922436	pseudogene	THAP domain containing 6
5	gene	91.98270	91.98298	positive	MGI_C57BL6J_5453890	Gm24113	ENSEMBL:ENSMUSG00000088102	MGI:5453890	unclassified non-coding RNA gene	predicted gene, 24113
5	gene	91.98747	91.99532	positive	MGI_C57BL6J_2685891	Odaph	NCBI_Gene:381651,ENSEMBL:ENSMUSG00000096035	MGI:2685891	protein coding gene	odontogenesis associated phosphoprotein
5	gene	92.00607	92.04388	negative	MGI_C57BL6J_1858227	Cdkl2	NCBI_Gene:53886,ENSEMBL:ENSMUSG00000029403	MGI:1858227	protein coding gene	cyclin-dependent kinase-like 2 (CDC2-related kinase)
5	gene	92.01610	92.01711	negative	MGI_C57BL6J_5826552	Gm46915	NCBI_Gene:108169054	MGI:5826552	protein coding gene	predicted gene, 46915
5	gene	92.04306	92.05596	positive	MGI_C57BL6J_5477076	Gm26582	ENSEMBL:ENSMUSG00000097479	MGI:5477076	lncRNA gene	predicted gene, 26582
5	gene	92.05214	92.13774	negative	MGI_C57BL6J_2442040	G3bp2	NCBI_Gene:23881,ENSEMBL:ENSMUSG00000029405	MGI:2442040	protein coding gene	GTPase activating protein (SH3 domain) binding protein 2
5	gene	92.05606	92.05619	negative	MGI_C57BL6J_5452505	Gm22728	ENSEMBL:ENSMUSG00000088712	MGI:5452505	snoRNA gene	predicted gene, 22728
5	gene	92.06110	92.06247	negative	MGI_C57BL6J_5624996	Gm42111	NCBI_Gene:105246915	MGI:5624996	lncRNA gene	predicted gene, 42111
5	gene	92.07473	92.08416	positive	MGI_C57BL6J_5826570	Gm46933	NCBI_Gene:108169096	MGI:5826570	protein coding gene	predicted gene, 46933
5	gene	92.11818	92.11828	negative	MGI_C57BL6J_5454708	Gm24931	ENSEMBL:ENSMUSG00000088949	MGI:5454708	rRNA gene	predicted gene, 24931
5	gene	92.12617	92.12975	positive	MGI_C57BL6J_2444469	D430040L24Rik	NCBI_Gene:105246914	MGI:2444469	lncRNA gene	RIKEN cDNA D430040L24 gene
5	gene	92.13791	92.20280	positive	MGI_C57BL6J_1929095	Uso1	NCBI_Gene:56041,ENSEMBL:ENSMUSG00000029407	MGI:1929095	protein coding gene	USO1 vesicle docking factor
5	pseudogene	92.14024	92.14097	negative	MGI_C57BL6J_3783151	Gm15710	NCBI_Gene:100040605,ENSEMBL:ENSMUSG00000084111	MGI:3783151	pseudogene	predicted gene 15710
5	gene	92.19136	92.19192	negative	MGI_C57BL6J_5663177	Gm43040	ENSEMBL:ENSMUSG00000107354	MGI:5663177	unclassified gene	predicted gene 43040
5	gene	92.19332	92.19347	positive	MGI_C57BL6J_5455067	Gm25290	ENSEMBL:ENSMUSG00000084745	MGI:5455067	snoRNA gene	predicted gene, 25290
5	gene	92.20989	92.21541	negative	MGI_C57BL6J_1930915	U90926	NCBI_Gene:57425,ENSEMBL:ENSMUSG00000029409	MGI:1930915	lncRNA gene	cDNA sequence U90926
5	gene	92.21018	92.21276	positive	MGI_C57BL6J_5624998	Gm42113	NCBI_Gene:105246917	MGI:5624998	lncRNA gene	predicted gene, 42113
5	gene	92.21656	92.22401	positive	MGI_C57BL6J_5624997	Gm42112	NCBI_Gene:105246916	MGI:5624997	lncRNA gene	predicted gene, 42112
5	gene	92.22668	92.25690	negative	MGI_C57BL6J_1342304	Ppef2	NCBI_Gene:19023,ENSEMBL:ENSMUSG00000029410	MGI:1342304	protein coding gene	protein phosphatase, EF hand calcium-binding domain 2
5	gene	92.25766	92.27818	negative	MGI_C57BL6J_1914361	Naaa	NCBI_Gene:67111,ENSEMBL:ENSMUSG00000029413	MGI:1914361	protein coding gene	N-acylethanolamine acid amidase
5	gene	92.28401	92.31048	negative	MGI_C57BL6J_2140779	Sdad1	NCBI_Gene:231452,ENSEMBL:ENSMUSG00000029415	MGI:2140779	protein coding gene	SDA1 domain containing 1
5	gene	92.29005	92.30276	positive	MGI_C57BL6J_5663736	Gm43599	ENSEMBL:ENSMUSG00000106698	MGI:5663736	lncRNA gene	predicted gene 43599
5	gene	92.30217	92.30229	positive	MGI_C57BL6J_5452808	Gm23031	ENSEMBL:ENSMUSG00000088623	MGI:5452808	snRNA gene	predicted gene, 23031
5	gene	92.32133	92.32808	negative	MGI_C57BL6J_1352449	Cxcl9	NCBI_Gene:17329,ENSEMBL:ENSMUSG00000029417	MGI:1352449	protein coding gene	chemokine (C-X-C motif) ligand 9
5	gene	92.33180	92.41463	positive	MGI_C57BL6J_1202729	Art3	NCBI_Gene:109979,ENSEMBL:ENSMUSG00000034842	MGI:1202729	protein coding gene	ADP-ribosyltransferase 3
5	gene	92.34664	92.34889	negative	MGI_C57BL6J_1352450	Cxcl10	NCBI_Gene:15945,ENSEMBL:ENSMUSG00000034855	MGI:1352450	protein coding gene	chemokine (C-X-C motif) ligand 10
5	pseudogene	92.35954	92.36549	negative	MGI_C57BL6J_1860203	Cxcl11	NCBI_Gene:56066,ENSEMBL:ENSMUSG00000060183	MGI:1860203	polymorphic pseudogene	chemokine (C-X-C motif) ligand 11
5	pseudogene	92.36390	92.36551	positive	MGI_C57BL6J_3780842	Gm2673	NCBI_Gene:100040228,ENSEMBL:ENSMUSG00000082068	MGI:3780842	pseudogene	predicted gene 2673
5	gene	92.41554	92.43527	negative	MGI_C57BL6J_1920460	Nup54	NCBI_Gene:269113,ENSEMBL:ENSMUSG00000034826	MGI:1920460	protein coding gene	nucleoporin 54
5	gene	92.42978	92.42993	positive	MGI_C57BL6J_5455816	Gm26039	ENSEMBL:ENSMUSG00000088777	MGI:5455816	snoRNA gene	predicted gene, 26039
5	gene	92.43480	92.43607	positive	MGI_C57BL6J_5624999	Gm42114	NCBI_Gene:105246918	MGI:5624999	lncRNA gene	predicted gene, 42114
5	gene	92.44131	92.50683	negative	MGI_C57BL6J_1196458	Scarb2	NCBI_Gene:12492,ENSEMBL:ENSMUSG00000029426	MGI:1196458	protein coding gene	scavenger receptor class B, member 2
5	gene	92.45856	92.45866	positive	MGI_C57BL6J_5531096	Mir6415	miRBase:MI0021953,NCBI_Gene:102466159,ENSEMBL:ENSMUSG00000099160	MGI:5531096	miRNA gene	microRNA 6415
5	gene	92.55495	92.59128	positive	MGI_C57BL6J_2686227	Fam47e	NCBI_Gene:384198,ENSEMBL:ENSMUSG00000057068	MGI:2686227	protein coding gene	family with sequence similarity 47, member E
5	gene	92.60304	92.60658	positive	MGI_C57BL6J_1261768	Stbd1	NCBI_Gene:52331,ENSEMBL:ENSMUSG00000047963	MGI:1261768	protein coding gene	starch binding domain 1
5	gene	92.60795	92.67528	negative	MGI_C57BL6J_2444555	Ccdc158	NCBI_Gene:320696,ENSEMBL:ENSMUSG00000050050	MGI:2444555	protein coding gene	coiled-coil domain containing 158
5	gene	92.68344	92.96576	positive	MGI_C57BL6J_1351655	Shroom3	NCBI_Gene:27428,ENSEMBL:ENSMUSG00000029381	MGI:1351655	protein coding gene	shroom family member 3
5	gene	92.73620	92.73744	positive	MGI_C57BL6J_5141965	Gm20500	ENSEMBL:ENSMUSG00000092266	MGI:5141965	lncRNA gene	predicted gene 20500
5	gene	92.78845	92.78856	negative	MGI_C57BL6J_3837206	Mir1961	miRBase:MI0009958,NCBI_Gene:100316841,ENSEMBL:ENSMUSG00000089268	MGI:3837206	miRNA gene	microRNA 1961
5	gene	92.80422	92.80949	negative	MGI_C57BL6J_3588223	4932430I15Rik	ENSEMBL:ENSMUSG00000097135	MGI:3588223	lncRNA gene	RIKEN cDNA 4932430I15 gene
5	gene	92.89956	92.90230	negative	MGI_C57BL6J_5625000	Gm42115	NCBI_Gene:105246919	MGI:5625000	lncRNA gene	predicted gene, 42115
5	gene	92.98863	93.00907	negative	MGI_C57BL6J_5595923	Gm36764	NCBI_Gene:102640780	MGI:5595923	lncRNA gene	predicted gene, 36764
5	pseudogene	93.00379	93.00450	positive	MGI_C57BL6J_3648082	Gm6450	NCBI_Gene:623798,ENSEMBL:ENSMUSG00000106930	MGI:3648082	pseudogene	predicted gene 6450
5	gene	93.01303	93.01314	negative	MGI_C57BL6J_5455298	Gm25521	ENSEMBL:ENSMUSG00000089018	MGI:5455298	snRNA gene	predicted gene, 25521
5	gene	93.04112	93.04502	negative	MGI_C57BL6J_1925338	Sowahb	NCBI_Gene:78088,ENSEMBL:ENSMUSG00000045314	MGI:1925338	protein coding gene	sosondowah ankyrin repeat domain family member B
5	gene	93.04472	93.04843	positive	MGI_C57BL6J_2441739	9330159N05Rik	NA	NA	protein coding gene	RIKEN cDNA 9330159N05 gene
5	gene	93.07386	93.07400	positive	MGI_C57BL6J_5452692	Gm22915	ENSEMBL:ENSMUSG00000088240	MGI:5452692	snoRNA gene	predicted gene, 22915
5	gene	93.09099	93.09313	positive	MGI_C57BL6J_5663309	Gm43172	ENSEMBL:ENSMUSG00000107374	MGI:5663309	unclassified gene	predicted gene 43172
5	gene	93.09242	93.18174	positive	MGI_C57BL6J_1277214	Sept11	NCBI_Gene:52398,ENSEMBL:ENSMUSG00000058013	MGI:1277214	protein coding gene	septin 11
5	gene	93.09276	93.09335	negative	MGI_C57BL6J_5663310	Gm43173	ENSEMBL:ENSMUSG00000107194	MGI:5663310	unclassified gene	predicted gene 43173
5	gene	93.17697	93.17906	positive	MGI_C57BL6J_5663819	Gm43682	ENSEMBL:ENSMUSG00000107019	MGI:5663819	unclassified gene	predicted gene 43682
5	gene	93.18193	93.20650	negative	MGI_C57BL6J_1341077	Ccni	NCBI_Gene:12453,ENSEMBL:ENSMUSG00000063015	MGI:1341077	protein coding gene	cyclin I
5	gene	93.18386	93.18576	negative	MGI_C57BL6J_5663818	Gm43681	ENSEMBL:ENSMUSG00000106870	MGI:5663818	unclassified gene	predicted gene 43681
5	pseudogene	93.19494	93.19660	positive	MGI_C57BL6J_3781164	Gm2986	NCBI_Gene:108169055,ENSEMBL:ENSMUSG00000083700	MGI:3781164	pseudogene	predicted gene 2986
5	gene	93.20652	93.21348	positive	MGI_C57BL6J_1922860	2010109A12Rik	NCBI_Gene:75610,ENSEMBL:ENSMUSG00000029384	MGI:1922860	protein coding gene	RIKEN cDNA 2010109A12 gene
5	gene	93.22165	93.25519	positive	MGI_C57BL6J_5625001	Gm42116	NCBI_Gene:105246921	MGI:5625001	lncRNA gene	predicted gene, 42116
5	gene	93.26726	93.27623	positive	MGI_C57BL6J_1095734	Ccng2	NCBI_Gene:12452,ENSEMBL:ENSMUSG00000029385	MGI:1095734	protein coding gene	cyclin G2
5	pseudogene	93.38222	93.39309	negative	MGI_C57BL6J_3648817	Kat2b-ps	NCBI_Gene:100504388,ENSEMBL:ENSMUSG00000053208	MGI:3648817	pseudogene	K(lysine) acetyltransferase 2B, pseudogene
5	pseudogene	93.41063	93.41186	positive	MGI_C57BL6J_5010303	Gm18118	NCBI_Gene:100416454,ENSEMBL:ENSMUSG00000107356	MGI:5010303	pseudogene	predicted gene, 18118
5	pseudogene	93.42167	93.42340	positive	MGI_C57BL6J_5663361	Gm43224	ENSEMBL:ENSMUSG00000106699	MGI:5663361	pseudogene	predicted gene 43224
5	gene	93.48182	93.49369	negative	MGI_C57BL6J_3845011	Gm16367	NA	NA	protein coding gene	predicted gene 16367
5	gene	93.48183	93.54020	negative	MGI_C57BL6J_3704103	Gm16427	NCBI_Gene:100040885,ENSEMBL:ENSMUSG00000096044	MGI:3704103	protein coding gene	predicted gene 16427
5	gene	93.63499	93.67155	negative	MGI_C57BL6J_2141341	C87414	NCBI_Gene:381654,ENSEMBL:ENSMUSG00000070686	MGI:2141341	protein coding gene	expressed sequence C87414
5	pseudogene	93.69499	93.69772	negative	MGI_C57BL6J_5663362	Gm43225	ENSEMBL:ENSMUSG00000107346	MGI:5663362	pseudogene	predicted gene 43225
5	pseudogene	93.70647	93.70673	positive	MGI_C57BL6J_5663363	Gm43226	ENSEMBL:ENSMUSG00000106954	MGI:5663363	pseudogene	predicted gene 43226
5	pseudogene	93.73807	93.74079	positive	MGI_C57BL6J_3645426	Gm7919	NCBI_Gene:108169112,ENSEMBL:ENSMUSG00000107159	MGI:3645426	pseudogene	predicted gene 7919
5	pseudogene	93.77030	93.77180	positive	MGI_C57BL6J_5663364	Gm43227	ENSEMBL:ENSMUSG00000107247	MGI:5663364	pseudogene	predicted gene 43227
5	gene	93.79462	93.85611	positive	MGI_C57BL6J_3704104	Gm7792	NCBI_Gene:665802,ENSEMBL:ENSMUSG00000107392	MGI:3704104	protein coding gene	predicted gene 7792
5	pseudogene	93.92029	93.93949	positive	MGI_C57BL6J_3644199	Gm6346	NCBI_Gene:622719,ENSEMBL:ENSMUSG00000106701	MGI:3644199	pseudogene	predicted gene 6346
5	gene	93.92478	93.92920	negative	MGI_C57BL6J_3704105	Gm16429	NCBI_Gene:100040981,ENSEMBL:ENSMUSG00000096230	MGI:3704105	protein coding gene	predicted gene 16429
5	pseudogene	93.99645	93.99918	positive	MGI_C57BL6J_3781265	Gm3089	NCBI_Gene:100041003,ENSEMBL:ENSMUSG00000106916	MGI:3781265	pseudogene	predicted gene 3089
5	gene	94.02057	94.08100	positive	MGI_C57BL6J_3647817	Gm6351	NCBI_Gene:622744,ENSEMBL:ENSMUSG00000072821	MGI:3647817	protein coding gene	predicted gene 6351
5	gene	94.06615	94.07054	negative	MGI_C57BL6J_2681870	BC061212	NCBI_Gene:381724,ENSEMBL:ENSMUSG00000072822	MGI:2681870	protein coding gene	cDNA sequence BC061212
5	gene	94.16040	94.22201	positive	MGI_C57BL6J_3781282	Gm3106	NCBI_Gene:100041032,ENSEMBL:ENSMUSG00000096259	MGI:3781282	protein coding gene	predicted gene 3106
5	gene	94.29799	94.31726	positive	MGI_C57BL6J_3779601	Gm6502	NCBI_Gene:624421,ENSEMBL:ENSMUSG00000095718	MGI:3779601	protein coding gene	predicted gene 6502
5	gene	94.30252	94.30680	negative	MGI_C57BL6J_2683305	A430089I19Rik	NCBI_Gene:331195,ENSEMBL:ENSMUSG00000094560	MGI:2683305	protein coding gene	RIKEN cDNA A430089I19 gene
5	gene	94.33975	94.38508	positive	MGI_C57BL6J_2140789	AA792892	NCBI_Gene:100554,ENSEMBL:ENSMUSG00000073497	MGI:2140789	protein coding gene	expressed sequence AA792892
5	gene	94.40544	94.44865	positive	MGI_C57BL6J_3779756	Gm7682	NCBI_Gene:102633100,ENSEMBL:ENSMUSG00000074011	MGI:3779756	protein coding gene	predicted gene 7682
5	pseudogene	94.43391	94.43694	negative	MGI_C57BL6J_3770624	BC080696	NCBI_Gene:665521,ENSEMBL:ENSMUSG00000107315	MGI:3770624	pseudogene	cDNA sequence BC080696
5	gene	94.52628	94.54642	positive	MGI_C57BL6J_3781318	Gm3139	NCBI_Gene:100041102,ENSEMBL:ENSMUSG00000095074	MGI:3781318	protein coding gene	predicted gene 3139
5	gene	94.58641	94.60737	positive	MGI_C57BL6J_5625002	Gm42117	NCBI_Gene:105246922	MGI:5625002	lncRNA gene	predicted gene, 42117
5	gene	94.60759	94.62685	positive	MGI_C57BL6J_3779602	Gm6509	NCBI_Gene:108169097,ENSEMBL:ENSMUSG00000094195	MGI:3779602	protein coding gene	predicted gene 6509
5	gene	94.61207	94.61646	negative	MGI_C57BL6J_3781326	Gm3147	NCBI_Gene:100041115,ENSEMBL:ENSMUSG00000095503	MGI:3781326	protein coding gene	predicted gene 3147
5	gene	94.64838	94.68635	positive	MGI_C57BL6J_3779572	Gm6205	NCBI_Gene:621203,ENSEMBL:ENSMUSG00000092073	MGI:3779572	protein coding gene	predicted gene 6205
5	pseudogene	94.73336	94.73609	positive	MGI_C57BL6J_5662698	Gm42561	ENSEMBL:ENSMUSG00000107064	MGI:5662698	pseudogene	predicted gene 42561
5	pseudogene	94.76934	94.77207	negative	MGI_C57BL6J_3779755	Gm7663	NCBI_Gene:665499,ENSEMBL:ENSMUSG00000107187	MGI:3779755	pseudogene	predicted gene 7663
5	gene	94.77822	94.78092	positive	MGI_C57BL6J_5826571	Gm46934	NCBI_Gene:108169098	MGI:5826571	protein coding gene	predicted gene, 46934
5	gene	94.86544	94.88539	positive	MGI_C57BL6J_3781362	Gm3183	NCBI_Gene:100041179,ENSEMBL:ENSMUSG00000095954	MGI:3781362	protein coding gene	predicted gene 3183
5	gene	94.92534	94.94631	positive	MGI_C57BL6J_5625003	Gm42118	NCBI_Gene:105246923	MGI:5625003	lncRNA gene	predicted gene, 42118
5	pseudogene	94.94653	94.96570	positive	MGI_C57BL6J_3779753	Gm7647	NCBI_Gene:108169099,ENSEMBL:ENSMUSG00000073510	MGI:3779753	pseudogene	predicted gene 7647
5	pseudogene	94.95125	94.95540	negative	MGI_C57BL6J_3781355	Gm3176	NCBI_Gene:100041166,ENSEMBL:ENSMUSG00000107285	MGI:3781355	pseudogene	predicted gene 3176
5	gene	94.98863	95.02654	positive	MGI_C57BL6J_3704106	Gm6367	NCBI_Gene:622894,ENSEMBL:ENSMUSG00000096742	MGI:3704106	protein coding gene	predicted gene 6367
5	pseudogene	95.05615	95.05966	positive	MGI_C57BL6J_5826576	Gm46939	NCBI_Gene:108169113	MGI:5826576	pseudogene	predicted gene, 46939
5	pseudogene	95.06358	95.06631	positive	MGI_C57BL6J_5662798	Gm42661	ENSEMBL:ENSMUSG00000107376	MGI:5662798	pseudogene	predicted gene 42661
5	pseudogene	95.09959	95.10231	negative	MGI_C57BL6J_3647260	Gm7939	NCBI_Gene:666125,ENSEMBL:ENSMUSG00000106780	MGI:3647260	pseudogene	predicted gene 7939
5	gene	95.10670	95.11116	positive	MGI_C57BL6J_3646599	Gm7942	NCBI_Gene:108169100,ENSEMBL:ENSMUSG00000092166	MGI:3646599	protein coding gene	predicted gene 7942
5	gene	95.18262	95.19534	positive	MGI_C57BL6J_2141041	Gm16513	NCBI_Gene:100041253,ENSEMBL:ENSMUSG00000095996	MGI:2141041	protein coding gene	predicted gene, Gm16513
5	pseudogene	95.26396	95.28320	positive	MGI_C57BL6J_3646666	Gm6468	NCBI_Gene:624049,ENSEMBL:ENSMUSG00000107348	MGI:3646666	pseudogene	predicted gene 6468
5	gene	95.26849	95.27288	negative	MGI_C57BL6J_3704250	Gm10424	NCBI_Gene:100041264,ENSEMBL:ENSMUSG00000096066	MGI:3704250	protein coding gene	predicted gene 10424
5	gene	95.30591	95.34392	positive	MGI_C57BL6J_3781437	Gm3259	NCBI_Gene:100041296,ENSEMBL:ENSMUSG00000079424	MGI:3781437	protein coding gene	predicted gene 3259
5	pseudogene	95.38105	95.38378	positive	MGI_C57BL6J_5591231	Gm32072	ENSEMBL:ENSMUSG00000107122	MGI:5591231	pseudogene	predicted gene, 32072
5	pseudogene	95.41706	95.41978	negative	MGI_C57BL6J_3643212	Gm7961	NCBI_Gene:666164,ENSEMBL:ENSMUSG00000106821	MGI:3643212	pseudogene	predicted gene 7961
5	pseudogene	95.42593	95.42863	negative	MGI_C57BL6J_5662799	Gm42662	ENSEMBL:ENSMUSG00000107357	MGI:5662799	pseudogene	predicted gene 42662
5	gene	95.42593	95.42864	positive	MGI_C57BL6J_5826572	Gm46935	NCBI_Gene:108169101	MGI:5826572	protein coding gene	predicted gene, 46935
5	gene	95.45681	95.48559	positive	MGI_C57BL6J_1261918	D5Ertd577e	NCBI_Gene:320549,ENSEMBL:ENSMUSG00000070677	MGI:1261918	protein coding gene	DNA segment, Chr 5, ERATO Doi 577, expressed
5	gene	95.51074	95.52295	positive	MGI_C57BL6J_3781464	Gm3286	NCBI_Gene:100041354,ENSEMBL:ENSMUSG00000079423	MGI:3781464	protein coding gene	predicted gene 3286
5	pseudogene	95.58611	95.60531	positive	MGI_C57BL6J_3643967	Gm6348	NCBI_Gene:622731,ENSEMBL:ENSMUSG00000106690	MGI:3643967	pseudogene	predicted gene 6348
5	gene	95.59060	95.59502	negative	MGI_C57BL6J_3779772	Gm7971	NCBI_Gene:666187,ENSEMBL:ENSMUSG00000094043	MGI:3779772	protein coding gene	predicted gene 7971
5	pseudogene	95.66227	95.66500	positive	MGI_C57BL6J_3781480	Gm3302	NCBI_Gene:100041380,ENSEMBL:ENSMUSG00000107213	MGI:3781480	pseudogene	predicted gene 3302
5	gene	95.68641	95.74662	positive	MGI_C57BL6J_3648891	Gm7982	NCBI_Gene:666209,ENSEMBL:ENSMUSG00000072814	MGI:3648891	protein coding gene	predicted gene 7982
5	gene	95.73179	95.73617	negative	MGI_C57BL6J_3704107	Gm7978	NCBI_Gene:666203,ENSEMBL:ENSMUSG00000096139	MGI:3704107	protein coding gene	predicted gene 7978
5	gene	95.77587	95.80471	positive	MGI_C57BL6J_3615333	E330014E10Rik	NCBI_Gene:665943,ENSEMBL:ENSMUSG00000072813	MGI:3615333	protein coding gene	RIKEN cDNA E330014E10 gene
5	pseudogene	95.83496	95.83745	negative	MGI_C57BL6J_5662851	Gm42714	ENSEMBL:ENSMUSG00000106805	MGI:5662851	pseudogene	predicted gene 42714
5	pseudogene	95.86170	95.86289	positive	MGI_C57BL6J_3779498	Gm5559	NCBI_Gene:433921,ENSEMBL:ENSMUSG00000096617	MGI:3779498	pseudogene	predicted gene 5559
5	gene	95.86733	95.86744	positive	MGI_C57BL6J_5455714	Gm25937	ENSEMBL:ENSMUSG00000094471	MGI:5455714	snRNA gene	predicted gene, 25937
5	gene	95.95694	95.96107	positive	MGI_C57BL6J_1888499	Cxcl13	NCBI_Gene:55985,ENSEMBL:ENSMUSG00000023078	MGI:1888499	protein coding gene	chemokine (C-X-C motif) ligand 13
5	pseudogene	95.97424	95.97562	positive	MGI_C57BL6J_3647399	Gm7993	NCBI_Gene:666231,ENSEMBL:ENSMUSG00000107092	MGI:3647399	pseudogene	predicted gene 7993
5	gene	96.07033	96.16431	negative	MGI_C57BL6J_2443154	Cnot6l	NCBI_Gene:231464,ENSEMBL:ENSMUSG00000034724	MGI:2443154	protein coding gene	CCR4-NOT transcription complex, subunit 6-like
5	pseudogene	96.17394	96.17435	positive	MGI_C57BL6J_3781012	Gm2840	ENSEMBL:ENSMUSG00000090468	MGI:3781012	pseudogene	predicted gene 2840
5	gene	96.20949	96.26673	positive	MGI_C57BL6J_2137202	Mrpl1	NCBI_Gene:94061,ENSEMBL:ENSMUSG00000029486	MGI:2137202	protein coding gene	mitochondrial ribosomal protein L1
5	gene	96.37382	96.78473	positive	MGI_C57BL6J_2385368	Fras1	NCBI_Gene:231470,ENSEMBL:ENSMUSG00000034687	MGI:2385368	protein coding gene	Fraser extracellular matrix complex subunit 1
5	gene	96.45639	96.46008	negative	MGI_C57BL6J_5592209	Gm33050	NCBI_Gene:102635803,ENSEMBL:ENSMUSG00000106263	MGI:5592209	lncRNA gene	predicted gene, 33050
5	gene	96.48577	96.48615	positive	MGI_C57BL6J_5662742	Gm42605	ENSEMBL:ENSMUSG00000105446	MGI:5662742	unclassified gene	predicted gene 42605
5	gene	96.72906	96.73388	negative	MGI_C57BL6J_5592154	Gm32995	NCBI_Gene:102635733	MGI:5592154	lncRNA gene	predicted gene, 32995
5	gene	96.73555	96.73936	negative	MGI_C57BL6J_5662741	Gm42604	ENSEMBL:ENSMUSG00000106526	MGI:5662741	lncRNA gene	predicted gene 42604
5	gene	96.79334	96.84597	positive	MGI_C57BL6J_1201378	Anxa3	NCBI_Gene:11745,ENSEMBL:ENSMUSG00000029484	MGI:1201378	protein coding gene	annexin A3
5	gene	96.79821	96.80035	positive	MGI_C57BL6J_5662740	Gm42603	ENSEMBL:ENSMUSG00000105356	MGI:5662740	unclassified gene	predicted gene 42603
5	gene	96.84950	96.85294	positive	MGI_C57BL6J_1916674	1700016F12Rik	ENSEMBL:ENSMUSG00000104955	MGI:1916674	lncRNA gene	RIKEN cDNA 1700016F12 gene
5	gene	96.87931	96.89117	positive	MGI_C57BL6J_5592259	Gm33100	NCBI_Gene:102635874	MGI:5592259	lncRNA gene	predicted gene, 33100
5	gene	96.87934	96.89117	positive	MGI_C57BL6J_5662738	Gm42601	ENSEMBL:ENSMUSG00000106319	MGI:5662738	lncRNA gene	predicted gene 42601
5	gene	96.87952	96.88274	positive	MGI_C57BL6J_5662739	Gm42602	ENSEMBL:ENSMUSG00000104698	MGI:5662739	unclassified gene	predicted gene 42602
5	gene	96.89940	96.93406	negative	MGI_C57BL6J_5592529	Gm33370	NCBI_Gene:102636251,ENSEMBL:ENSMUSG00000105283	MGI:5592529	lncRNA gene	predicted gene, 33370
5	gene	96.90763	96.90783	positive	MGI_C57BL6J_5454400	Gm24623	ENSEMBL:ENSMUSG00000064550	MGI:5454400	snRNA gene	predicted gene, 24623
5	gene	96.91270	96.91324	negative	MGI_C57BL6J_5663284	Gm43147	ENSEMBL:ENSMUSG00000105871	MGI:5663284	unclassified gene	predicted gene 43147
5	gene	96.92127	96.93487	positive	MGI_C57BL6J_3648644	Gm8013	NCBI_Gene:666266,ENSEMBL:ENSMUSG00000106357	MGI:3648644	lncRNA gene	predicted gene 8013
5	gene	96.93661	96.94209	negative	MGI_C57BL6J_5826553	Gm46916	NCBI_Gene:108169056	MGI:5826553	lncRNA gene	predicted gene, 46916
5	gene	96.93681	96.93733	positive	MGI_C57BL6J_5663285	Gm43148	ENSEMBL:ENSMUSG00000105377	MGI:5663285	unclassified gene	predicted gene 43148
5	gene	96.94030	96.94078	positive	MGI_C57BL6J_5663281	Gm43144	ENSEMBL:ENSMUSG00000105257	MGI:5663281	unclassified gene	predicted gene 43144
5	gene	96.99620	96.99793	negative	MGI_C57BL6J_3779894	Gm9484	NCBI_Gene:670358,ENSEMBL:ENSMUSG00000105006	MGI:3779894	lncRNA gene	predicted gene 9484
5	gene	96.99769	97.09187	positive	MGI_C57BL6J_2155456	Bmp2k	NCBI_Gene:140780,ENSEMBL:ENSMUSG00000034663	MGI:2155456	protein coding gene	BMP2 inducible kinase
5	gene	97.04618	97.04681	positive	MGI_C57BL6J_5663282	Gm43145	ENSEMBL:ENSMUSG00000104591	MGI:5663282	unclassified gene	predicted gene 43145
5	gene	97.08233	97.11175	negative	MGI_C57BL6J_2679683	Paqr3	NCBI_Gene:231474,ENSEMBL:ENSMUSG00000055725	MGI:2679683	protein coding gene	progestin and adipoQ receptor family member III
5	gene	97.13177	97.14985	positive	MGI_C57BL6J_5592768	Gm33609	NCBI_Gene:102636587,ENSEMBL:ENSMUSG00000104736	MGI:5592768	lncRNA gene	predicted gene, 33609
5	gene	97.19559	97.20796	positive	MGI_C57BL6J_3781037	Gm2861	ENSEMBL:ENSMUSG00000105850	MGI:3781037	lncRNA gene	predicted gene 2861
5	gene	97.20843	97.22377	negative	MGI_C57BL6J_5593070	Gm33911	NCBI_Gene:102636993	MGI:5593070	lncRNA gene	predicted gene, 33911
5	pseudogene	97.26475	97.26599	positive	MGI_C57BL6J_3647980	Gm5560	NCBI_Gene:433923,ENSEMBL:ENSMUSG00000067161	MGI:3647980	pseudogene	predicted pseudogene 5560
5	gene	97.32590	97.34844	positive	MGI_C57BL6J_5593128	Gm33969	NCBI_Gene:102637064,ENSEMBL:ENSMUSG00000104717	MGI:5593128	lncRNA gene	predicted gene, 33969
5	gene	97.38220	97.39238	negative	MGI_C57BL6J_2141314	Naa11	NCBI_Gene:97243,ENSEMBL:ENSMUSG00000046000	MGI:2141314	protein coding gene	N(alpha)-acetyltransferase 11, NatA catalytic subunit
5	gene	97.39242	97.64218	positive	MGI_C57BL6J_1923064	4930467D21Rik	NCBI_Gene:75814,ENSEMBL:ENSMUSG00000097516	MGI:1923064	lncRNA gene	RIKEN cDNA 4930467D21 gene
5	gene	97.45514	97.45702	negative	MGI_C57BL6J_1329027	Gk2	NCBI_Gene:14626,ENSEMBL:ENSMUSG00000050553	MGI:1329027	protein coding gene	glycerol kinase 2
5	gene	97.63654	97.64316	positive	MGI_C57BL6J_5593188	Gm34029	NCBI_Gene:102637145	MGI:5593188	lncRNA gene	predicted gene, 34029
5	gene	97.82252	97.84696	negative	MGI_C57BL6J_5593256	Gm34097	NCBI_Gene:102637228	MGI:5593256	lncRNA gene	predicted gene, 34097
5	gene	97.88278	98.03104	negative	MGI_C57BL6J_1919164	Antxr2	NCBI_Gene:71914,ENSEMBL:ENSMUSG00000029338	MGI:1919164	protein coding gene	anthrax toxin receptor 2
5	gene	97.95405	97.95453	negative	MGI_C57BL6J_1337996	Gdap7	NA	NA	unclassified gene	ganglioside-induced differentiation-associated-protein 7
5	gene	97.99938	98.00095	negative	MGI_C57BL6J_3028058	C430019N01Rik	ENSEMBL:ENSMUSG00000105801	MGI:3028058	unclassified gene	RIKEN cDNA C430019N01 gene
5	gene	98.01584	98.02746	positive	MGI_C57BL6J_5593385	Gm34226	NCBI_Gene:102637413	MGI:5593385	lncRNA gene	predicted gene, 34226
5	gene	98.03157	98.03400	positive	MGI_C57BL6J_5662896	Gm42759	ENSEMBL:ENSMUSG00000106518	MGI:5662896	unclassified gene	predicted gene 42759
5	gene	98.04109	98.04116	negative	MGI_C57BL6J_4413955	n-TKctt8	NCBI_Gene:102467650	MGI:4413955	tRNA gene	nuclear encoded tRNA lysine 8 (anticodon CTT)
5	pseudogene	98.05679	98.05710	positive	MGI_C57BL6J_5662897	Gm42760	ENSEMBL:ENSMUSG00000105117	MGI:5662897	pseudogene	predicted gene 42760
5	pseudogene	98.07530	98.07594	negative	MGI_C57BL6J_3647081	Gm8041	NCBI_Gene:666315,ENSEMBL:ENSMUSG00000105441	MGI:3647081	pseudogene	predicted gene 8041
5	pseudogene	98.07868	98.08005	negative	MGI_C57BL6J_3648514	Gm8044	NCBI_Gene:666320	MGI:3648514	pseudogene	predicted gene 8044
5	gene	98.13652	98.13900	negative	MGI_C57BL6J_5625006	Gm42121	NCBI_Gene:105246926	MGI:5625006	lncRNA gene	predicted gene, 42121
5	pseudogene	98.15316	98.15438	positive	MGI_C57BL6J_3648505	Gm8048	NCBI_Gene:666326,ENSEMBL:ENSMUSG00000098073	MGI:3648505	pseudogene	predicted gene 8048
5	gene	98.16720	98.18899	positive	MGI_C57BL6J_1924880	Prdm8	NCBI_Gene:77630,ENSEMBL:ENSMUSG00000035456	MGI:1924880	protein coding gene	PR domain containing 8
5	gene	98.18312	98.18598	negative	MGI_C57BL6J_3696858	A730035I17Rik	NCBI_Gene:102637492,ENSEMBL:ENSMUSG00000045238	MGI:3696858	lncRNA gene	RIKEN cDNA A730035I17 gene
5	gene	98.25418	98.27703	positive	MGI_C57BL6J_95519	Fgf5	NCBI_Gene:14176,ENSEMBL:ENSMUSG00000029337	MGI:95519	protein coding gene	fibroblast growth factor 5
5	gene	98.32904	98.80205	positive	MGI_C57BL6J_1916571	Cfap299	NCBI_Gene:75784,ENSEMBL:ENSMUSG00000057816	MGI:1916571	protein coding gene	cilia and flagella associated protein 299
5	gene	98.34639	98.34932	positive	MGI_C57BL6J_2442014	E030032P16Rik	ENSEMBL:ENSMUSG00000104545	MGI:2442014	unclassified gene	RIKEN cDNA E030032P16 gene
5	pseudogene	98.45375	98.45413	positive	MGI_C57BL6J_5663904	Gm43767	ENSEMBL:ENSMUSG00000106273	MGI:5663904	pseudogene	predicted gene 43767
5	gene	98.47556	98.47566	negative	MGI_C57BL6J_3629657	Mir703	miRBase:MI0004687,NCBI_Gene:735265,ENSEMBL:ENSMUSG00000105814	MGI:3629657	miRNA gene	microRNA 703
5	gene	98.47989	98.51326	negative	MGI_C57BL6J_5593634	Gm34475	NCBI_Gene:102637741	MGI:5593634	lncRNA gene	predicted gene, 34475
5	gene	98.54148	98.54161	positive	MGI_C57BL6J_5454056	Gm24279	ENSEMBL:ENSMUSG00000077424	MGI:5454056	snoRNA gene	predicted gene, 24279
5	gene	98.55269	98.55374	positive	MGI_C57BL6J_3779363	Gm11111	ENSEMBL:ENSMUSG00000079416	MGI:3779363	protein coding gene	predicted gene 11111
5	gene	98.55363	98.56700	negative	MGI_C57BL6J_1922750	1700010H22Rik	ENSEMBL:ENSMUSG00000067101	MGI:1922750	lncRNA gene	RIKEN cDNA 1700010H22 gene
5	gene	98.56708	98.57317	positive	MGI_C57BL6J_5625007	Gm42122	NCBI_Gene:105246927	MGI:5625007	lncRNA gene	predicted gene, 42122
5	gene	98.83275	98.85451	negative	MGI_C57BL6J_5593722	Gm34563	NCBI_Gene:102637858	MGI:5593722	lncRNA gene	predicted gene, 34563
5	gene	98.85442	98.88440	positive	MGI_C57BL6J_88179	Bmp3	NCBI_Gene:110075,ENSEMBL:ENSMUSG00000029335	MGI:88179	protein coding gene	bone morphogenetic protein 3
5	gene	98.87439	98.89102	negative	MGI_C57BL6J_5625008	Gm42123	NCBI_Gene:105246928	MGI:5625008	lncRNA gene	predicted gene, 42123
5	gene	98.88166	98.88404	positive	MGI_C57BL6J_2442652	D630004D15Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA D630004D15 gene
5	gene	98.92977	99.03870	negative	MGI_C57BL6J_108173	Prkg2	NCBI_Gene:19092,ENSEMBL:ENSMUSG00000029334	MGI:108173	protein coding gene	protein kinase, cGMP-dependent, type II
5	gene	98.93030	98.93171	positive	MGI_C57BL6J_3704251	Gm10422	NA	NA	unclassified gene	predicted gene 10422
5	pseudogene	99.02167	99.02244	negative	MGI_C57BL6J_3781646	Gm3470	NCBI_Gene:100041680,ENSEMBL:ENSMUSG00000089659	MGI:3781646	pseudogene	predicted gene 3470
5	gene	99.03872	99.04291	positive	MGI_C57BL6J_5625009	Gm42124	NCBI_Gene:105246929	MGI:5625009	lncRNA gene	predicted gene, 42124
5	gene	99.03906	99.17142	negative	MGI_C57BL6J_5663388	Gm43251	ENSEMBL:ENSMUSG00000105579	MGI:5663388	lncRNA gene	predicted gene 43251
5	pseudogene	99.10686	99.10913	negative	MGI_C57BL6J_5012058	Gm19873	NCBI_Gene:100503753	MGI:5012058	pseudogene	predicted gene, 19873
5	gene	99.21742	99.72907	negative	MGI_C57BL6J_2443755	Rasgef1b	NCBI_Gene:320292,ENSEMBL:ENSMUSG00000089809	MGI:2443755	protein coding gene	RasGEF domain family, member 1B
5	gene	99.27342	99.27928	positive	MGI_C57BL6J_5594553	Gm35394	NCBI_Gene:102638959,ENSEMBL:ENSMUSG00000105686	MGI:5594553	lncRNA gene	predicted gene, 35394
5	gene	99.29724	99.72906	negative	MGI_C57BL6J_2442790	A930011G23Rik	NCBI_Gene:319818	MGI:2442790	lncRNA gene	RIKEN cDNA A930011G23 gene
5	gene	99.37027	99.38783	positive	MGI_C57BL6J_5594473	Gm35314	NCBI_Gene:102638846	MGI:5594473	lncRNA gene	predicted gene, 35314
5	gene	99.48035	99.48814	negative	MGI_C57BL6J_5625010	Gm42125	NCBI_Gene:105246931	MGI:5625010	lncRNA gene	predicted gene, 42125
5	gene	99.48825	99.49891	negative	MGI_C57BL6J_5594412	Gm35253	NCBI_Gene:102638768	MGI:5594412	lncRNA gene	predicted gene, 35253
5	gene	99.50656	99.51104	positive	MGI_C57BL6J_5594331	Gm35172	NCBI_Gene:102638661,ENSEMBL:ENSMUSG00000104753	MGI:5594331	lncRNA gene	predicted gene, 35172
5	gene	99.50994	99.51068	negative	MGI_C57BL6J_3801791	Gm16227	NCBI_Gene:105246930,ENSEMBL:ENSMUSG00000090006	MGI:3801791	lncRNA gene	predicted gene 16227
5	pseudogene	99.61062	99.61143	negative	MGI_C57BL6J_3801790	Gm16228	ENSEMBL:ENSMUSG00000089627	MGI:3801790	pseudogene	predicted gene 16228
5	gene	99.61682	99.62849	positive	MGI_C57BL6J_1921068	4930405H06Rik	NCBI_Gene:102638465,ENSEMBL:ENSMUSG00000090146	MGI:1921068	lncRNA gene	RIKEN cDNA 4930405H06 gene
5	gene	99.65570	99.65583	positive	MGI_C57BL6J_5455746	Gm25969	ENSEMBL:ENSMUSG00000087791	MGI:5455746	snoRNA gene	predicted gene, 25969
5	gene	99.68130	99.69032	positive	MGI_C57BL6J_5621576	Gm38691	NCBI_Gene:105242419	MGI:5621576	lncRNA gene	predicted gene, 38691
5	gene	99.68241	99.71601	positive	MGI_C57BL6J_3801792	Gm16226	NCBI_Gene:102638080,ENSEMBL:ENSMUSG00000089743	MGI:3801792	lncRNA gene	predicted gene 16226
5	gene	99.68300	99.68503	positive	MGI_C57BL6J_1922344	4930522N08Rik	ENSEMBL:ENSMUSG00000029331	MGI:1922344	lncRNA gene	RIKEN cDNA 4930522N08 gene
5	gene	99.73085	99.75397	negative	MGI_C57BL6J_5621298	Gm38413	NCBI_Gene:330133,ENSEMBL:ENSMUSG00000105218	MGI:5621298	lncRNA gene	predicted gene, 38413
5	pseudogene	99.83953	99.83999	negative	MGI_C57BL6J_5663386	Gm43249	ENSEMBL:ENSMUSG00000104731	MGI:5663386	pseudogene	predicted gene 43249
5	gene	99.85118	99.85396	negative	MGI_C57BL6J_5625011	Gm42126	NCBI_Gene:105246932	MGI:5625011	lncRNA gene	predicted gene, 42126
5	gene	99.87025	99.87032	positive	MGI_C57BL6J_5456029	Gm26252	ENSEMBL:ENSMUSG00000084445	MGI:5456029	snoRNA gene	predicted gene, 26252
5	gene	99.90608	99.95165	positive	MGI_C57BL6J_5595070	Vamp9	NCBI_Gene:102639650,ENSEMBL:ENSMUSG00000105078	MGI:5595070	protein coding gene	vesicle-associated membrane protein 9
5	gene	99.92828	99.92838	negative	MGI_C57BL6J_5452615	Gm22838	ENSEMBL:ENSMUSG00000089062	MGI:5452615	snRNA gene	predicted gene, 22838
5	gene	99.94731	99.94823	negative	MGI_C57BL6J_1922440	4930535B17Rik	NA	NA	unclassified gene	RIKEN cDNA 4930535B17 gene
5	gene	99.95593	99.98017	negative	MGI_C57BL6J_101947	Hnrnpd	NCBI_Gene:11991,ENSEMBL:ENSMUSG00000000568	MGI:101947	protein coding gene	heterogeneous nuclear ribonucleoprotein D
5	gene	99.96790	99.97653	negative	MGI_C57BL6J_5625012	Gm42127	NCBI_Gene:105246933	MGI:5625012	lncRNA gene	predicted gene, 42127
5	gene	99.97769	99.98017	positive	MGI_C57BL6J_4937919	Gm17092	ENSEMBL:ENSMUSG00000091623	MGI:4937919	lncRNA gene	predicted gene 17092
5	gene	99.97921	99.97965	negative	MGI_C57BL6J_1922379	4930524J08Rik	NA	NA	protein coding gene	RIKEN cDNA 4930524J08 gene
5	gene	100.03358	100.03994	negative	MGI_C57BL6J_1355299	Hnrnpdl	NCBI_Gene:50926,ENSEMBL:ENSMUSG00000029328	MGI:1355299	protein coding gene	heterogeneous nuclear ribonucleoprotein D-like
5	gene	100.03995	100.06892	positive	MGI_C57BL6J_1915120	Enoph1	NCBI_Gene:67870,ENSEMBL:ENSMUSG00000029326	MGI:1915120	protein coding gene	enolase-phosphatase 1
5	gene	100.05691	100.05699	negative	MGI_C57BL6J_5456140	Gm26363	ENSEMBL:ENSMUSG00000089491	MGI:5456140	snoRNA gene	predicted gene, 26363
5	gene	100.07787	100.16561	negative	MGI_C57BL6J_3041258	Tmem150c	NCBI_Gene:231503,ENSEMBL:ENSMUSG00000050640	MGI:3041258	protein coding gene	transmembrane protein 150C
5	gene	100.07796	100.09527	positive	MGI_C57BL6J_1923253	Tmem150cos	NCBI_Gene:76003,ENSEMBL:ENSMUSG00000086259	MGI:1923253	antisense lncRNA gene	transmembrane protein 150C, opposite strand
5	gene	100.10880	100.11566	positive	MGI_C57BL6J_5595326	Gm36167	NCBI_Gene:102639984	MGI:5595326	lncRNA gene	predicted gene, 36167
5	gene	100.19661	100.20072	positive	MGI_C57BL6J_3642594	Gm9932	ENSEMBL:ENSMUSG00000103927	MGI:3642594	lncRNA gene	predicted gene 9932
5	gene	100.21069	100.21805	positive	MGI_C57BL6J_1916821	2310034O05Rik	NCBI_Gene:69571,ENSEMBL:ENSMUSG00000100157	MGI:1916821	lncRNA gene	RIKEN cDNA 2310034O05 gene
5	gene	100.21259	100.21775	negative	MGI_C57BL6J_5595463	Gm36304	NCBI_Gene:102640175	MGI:5595463	lncRNA gene	predicted gene, 36304
5	pseudogene	100.22042	100.35512	negative	MGI_C57BL6J_3643169	Gm8091	NCBI_Gene:666417,ENSEMBL:ENSMUSG00000085915	MGI:3643169	pseudogene	predicted gene 8091
5	gene	100.27972	100.28955	positive	MGI_C57BL6J_5625014	Gm42129	NCBI_Gene:105246935	MGI:5625014	lncRNA gene	predicted gene, 42129
5	gene	100.29178	100.29226	positive	MGI_C57BL6J_5625013	Gm42128	NCBI_Gene:105246934	MGI:5625013	lncRNA gene	predicted gene, 42128
5	gene	100.30225	100.30725	positive	MGI_C57BL6J_5825550	Gm45913	NCBI_Gene:545785	MGI:5825550	unclassified gene	predicted gene, 45913
5	gene	100.36165	100.41626	negative	MGI_C57BL6J_1916412	Sec31a	NCBI_Gene:69162,ENSEMBL:ENSMUSG00000035325	MGI:1916412	protein coding gene	Sec31 homolog A (S. cerevisiae)
5	gene	100.42084	100.42954	negative	MGI_C57BL6J_1918676	5430416N02Rik	NCBI_Gene:100503199,ENSEMBL:ENSMUSG00000097772	MGI:1918676	lncRNA gene	RIKEN cDNA 5430416N02 gene
5	gene	100.42197	100.42204	positive	MGI_C57BL6J_5530935	Gm27553	ENSEMBL:ENSMUSG00000098355	MGI:5530935	unclassified non-coding RNA gene	predicted gene, 27553
5	gene	100.42674	100.42680	positive	MGI_C57BL6J_5531379	Gm27997	ENSEMBL:ENSMUSG00000098396	MGI:5531379	unclassified non-coding RNA gene	predicted gene, 27997
5	gene	100.42910	100.42924	positive	MGI_C57BL6J_5531412	Gm28030	ENSEMBL:ENSMUSG00000098711	MGI:5531412	unclassified non-coding RNA gene	predicted gene, 28030
5	gene	100.42933	100.42951	positive	MGI_C57BL6J_5530668	Gm27286	ENSEMBL:ENSMUSG00000098793	MGI:5530668	unclassified non-coding RNA gene	predicted gene, 27286
5	gene	100.42973	100.43156	positive	MGI_C57BL6J_5662827	Gm42690	ENSEMBL:ENSMUSG00000106391	MGI:5662827	unclassified gene	predicted gene 42690
5	gene	100.44192	100.50065	negative	MGI_C57BL6J_2140902	Lin54	NCBI_Gene:231506,ENSEMBL:ENSMUSG00000035310	MGI:2140902	protein coding gene	lin-54 homolog (C. elegans)
5	gene	100.50014	100.50022	negative	MGI_C57BL6J_5452999	Gm23222	ENSEMBL:ENSMUSG00000088742	MGI:5452999	miRNA gene	predicted gene, 23222
5	pseudogene	100.51314	100.51362	negative	MGI_C57BL6J_5011805	Gm19620	NCBI_Gene:100503266,ENSEMBL:ENSMUSG00000105181	MGI:5011805	pseudogene	predicted gene, 19620
5	gene	100.51728	100.51744	negative	MGI_C57BL6J_5452950	Gm23173	ENSEMBL:ENSMUSG00000087786	MGI:5452950	snRNA gene	predicted gene, 23173
5	gene	100.51831	100.54780	positive	MGI_C57BL6J_1349414	Cops4	NCBI_Gene:26891,ENSEMBL:ENSMUSG00000035297	MGI:1349414	protein coding gene	COP9 signalosome subunit 4
5	gene	100.55159	100.57225	negative	MGI_C57BL6J_2445289	Plac8	NCBI_Gene:231507,ENSEMBL:ENSMUSG00000029322	MGI:2445289	protein coding gene	placenta-specific 8
5	pseudogene	100.59240	100.59276	negative	MGI_C57BL6J_5663647	Gm43510	ENSEMBL:ENSMUSG00000104993	MGI:5663647	pseudogene	predicted gene 43510
5	gene	100.65472	100.67514	negative	MGI_C57BL6J_1919133	Coq2	NCBI_Gene:71883,ENSEMBL:ENSMUSG00000029319	MGI:1919133	protein coding gene	coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
5	gene	100.67086	100.67811	positive	MGI_C57BL6J_3783219	Gm15777	ENSEMBL:ENSMUSG00000085269	MGI:3783219	lncRNA gene	predicted gene 15777
5	gene	100.67948	100.71972	negative	MGI_C57BL6J_1343124	Hpse	NCBI_Gene:15442,ENSEMBL:ENSMUSG00000035273	MGI:1343124	protein coding gene	heparanase
5	gene	100.72710	100.75428	positive	MGI_C57BL6J_5595778	Gm36619	NCBI_Gene:102640591	MGI:5595778	lncRNA gene	predicted gene, 36619
5	gene	100.76214	100.79866	negative	MGI_C57BL6J_2176740	Helq	NCBI_Gene:191578,ENSEMBL:ENSMUSG00000035266	MGI:2176740	protein coding gene	helicase, POLQ-like
5	gene	100.79863	100.80447	positive	MGI_C57BL6J_1915985	Mrps18c	NCBI_Gene:68735,ENSEMBL:ENSMUSG00000016833	MGI:1915985	protein coding gene	mitochondrial ribosomal protein S18C
5	gene	100.79875	100.80105	positive	MGI_C57BL6J_5663648	Gm43511	ENSEMBL:ENSMUSG00000104761	MGI:5663648	unclassified gene	predicted gene 43511
5	gene	100.80480	100.84533	negative	MGI_C57BL6J_1917931	Abraxas1	NCBI_Gene:70681,ENSEMBL:ENSMUSG00000035234	MGI:1917931	protein coding gene	BRCA1 A complex subunit
5	gene	100.81421	100.81529	negative	MGI_C57BL6J_5663650	Gm43513	ENSEMBL:ENSMUSG00000105607	MGI:5663650	unclassified gene	predicted gene 43513
5	gene	100.82033	100.82075	negative	MGI_C57BL6J_5663651	Gm43514	ENSEMBL:ENSMUSG00000105755	MGI:5663651	lncRNA gene	predicted gene 43514
5	gene	100.83128	100.83141	positive	MGI_C57BL6J_5456063	Gm26286	ENSEMBL:ENSMUSG00000077354	MGI:5456063	snoRNA gene	predicted gene, 26286
5	gene	100.84080	100.84717	negative	MGI_C57BL6J_1923052	4930458D05Rik	ENSEMBL:ENSMUSG00000087611	MGI:1923052	lncRNA gene	RIKEN cDNA 4930458D05 gene
5	gene	100.84571	100.89910	positive	MGI_C57BL6J_3603816	Gpat3	NCBI_Gene:231510,ENSEMBL:ENSMUSG00000029314	MGI:3603816	protein coding gene	glycerol-3-phosphate acyltransferase 3
5	gene	100.84756	100.84896	positive	MGI_C57BL6J_5826554	Gm46917	NCBI_Gene:108169057	MGI:5826554	lncRNA gene	predicted gene, 46917
5	gene	100.88413	100.88648	positive	MGI_C57BL6J_5663124	Gm42987	ENSEMBL:ENSMUSG00000106178	MGI:5663124	unclassified gene	predicted gene 42987
5	gene	100.91000	100.91371	negative	MGI_C57BL6J_5595952	Gm36793	NCBI_Gene:102640815,ENSEMBL:ENSMUSG00000106255	MGI:5595952	lncRNA gene	predicted gene, 36793
5	gene	100.91319	100.92117	positive	MGI_C57BL6J_5595899	Gm36740	NCBI_Gene:102640744	MGI:5595899	lncRNA gene	predicted gene, 36740
5	gene	100.99287	100.99295	negative	MGI_C57BL6J_4413752	n-TDgtc1	NCBI_Gene:108169126	MGI:4413752	tRNA gene	nuclear encoded tRNA aspartic acid 1 (anticodon GTC)
5	gene	101.03255	101.03325	negative	MGI_C57BL6J_1925367	4930447E19Rik	NA	NA	unclassified gene	RIKEN cDNA 4930447E19 gene
5	gene	101.22602	101.23968	negative	MGI_C57BL6J_5596010	Gm36851	NCBI_Gene:102640893	MGI:5596010	lncRNA gene	predicted gene, 36851
5	gene	101.26448	101.26839	positive	MGI_C57BL6J_3781210	Gm3032	NCBI_Gene:100040902	MGI:3781210	lncRNA gene	predicted gene 3032
5	pseudogene	101.30557	101.30603	positive	MGI_C57BL6J_109499	Cycs-ps2	NCBI_Gene:13065,ENSEMBL:ENSMUSG00000105965	MGI:109499	pseudogene	cytochrome c, pseudogene 2
5	gene	101.44647	101.44947	negative	MGI_C57BL6J_5625016	Gm42131	NCBI_Gene:105246937	MGI:5625016	lncRNA gene	predicted gene, 42131
5	pseudogene	101.50553	101.50633	negative	MGI_C57BL6J_5663240	Gm43103	ENSEMBL:ENSMUSG00000106610	MGI:5663240	pseudogene	predicted gene 43103
5	gene	101.58643	101.59925	negative	MGI_C57BL6J_5589141	Gm29982	NCBI_Gene:102631712	MGI:5589141	lncRNA gene	predicted gene, 29982
5	gene	101.59931	101.60237	positive	MGI_C57BL6J_5141949	Gm20484	ENSEMBL:ENSMUSG00000092503	MGI:5141949	lncRNA gene	predicted gene 20484
5	gene	101.65029	101.65718	negative	MGI_C57BL6J_5625017	Gm42132	NCBI_Gene:105246938	MGI:5625017	lncRNA gene	predicted gene, 42132
5	gene	101.65814	101.66500	negative	MGI_C57BL6J_1206039	Nkx6-1	NCBI_Gene:18096,ENSEMBL:ENSMUSG00000035187	MGI:1206039	protein coding gene	NK6 homeobox 1
5	gene	101.69813	101.70406	negative	MGI_C57BL6J_5625018	Gm42133	NCBI_Gene:105246939,ENSEMBL:ENSMUSG00000105097	MGI:5625018	lncRNA gene	predicted gene, 42133
5	gene	101.70344	101.76387	positive	MGI_C57BL6J_1924611	9430085M18Rik	NCBI_Gene:77361,ENSEMBL:ENSMUSG00000106164	MGI:1924611	lncRNA gene	RIKEN cDNA 9430085M18 gene
5	gene	101.72310	101.74295	negative	MGI_C57BL6J_5625019	Gm42134	NCBI_Gene:105246940	MGI:5625019	lncRNA gene	predicted gene, 42134
5	gene	101.76513	101.82386	positive	MGI_C57BL6J_1921846	Cds1	NCBI_Gene:74596,ENSEMBL:ENSMUSG00000029330	MGI:1921846	protein coding gene	CDP-diacylglycerol synthase 1
5	gene	101.78308	101.78567	positive	MGI_C57BL6J_5663410	Gm43273	ENSEMBL:ENSMUSG00000104966	MGI:5663410	unclassified gene	predicted gene 43273
5	gene	101.81049	101.81207	positive	MGI_C57BL6J_5663409	Gm43272	ENSEMBL:ENSMUSG00000105632	MGI:5663409	unclassified gene	predicted gene 43272
5	gene	101.82615	101.84641	positive	MGI_C57BL6J_5142013	Gm20548	NCBI_Gene:108169124,ENSEMBL:ENSMUSG00000092354	MGI:5142013	lncRNA gene	predicted gene 20548
5	gene	101.83295	102.07213	negative	MGI_C57BL6J_1096875	Wdfy3	NCBI_Gene:72145,ENSEMBL:ENSMUSG00000043940	MGI:1096875	protein coding gene	WD repeat and FYVE domain containing 3
5	gene	101.94770	101.95661	positive	MGI_C57BL6J_5625020	Gm42135	NCBI_Gene:105246941	MGI:5625020	lncRNA gene	predicted gene, 42135
5	gene	101.95661	101.95795	positive	MGI_C57BL6J_5663071	Gm42934	ENSEMBL:ENSMUSG00000106451	MGI:5663071	unclassified gene	predicted gene 42934
5	gene	102.05703	102.05807	negative	MGI_C57BL6J_5663924	Gm43787	ENSEMBL:ENSMUSG00000105761	MGI:5663924	unclassified gene	predicted gene 43787
5	gene	102.07020	102.07395	positive	MGI_C57BL6J_5588866	Gm29707	NCBI_Gene:101055666,ENSEMBL:ENSMUSG00000106492	MGI:5588866	lncRNA gene	predicted gene, 29707
5	gene	102.11962	102.12180	negative	MGI_C57BL6J_5625021	Gm42136	NCBI_Gene:105246942	MGI:5625021	lncRNA gene	predicted gene, 42136
5	pseudogene	102.15953	102.16029	positive	MGI_C57BL6J_5010163	Gm17978	NCBI_Gene:100416222,ENSEMBL:ENSMUSG00000105088	MGI:5010163	pseudogene	predicted gene, 17978
5	pseudogene	102.16229	102.16436	positive	MGI_C57BL6J_5663070	Gm42933	ENSEMBL:ENSMUSG00000106189	MGI:5663070	pseudogene	predicted gene 42933
5	gene	102.17530	102.17821	positive	MGI_C57BL6J_5826584	Gm46947	NCBI_Gene:108169125	MGI:5826584	lncRNA gene	predicted gene, 46947
5	gene	102.20720	102.90503	positive	MGI_C57BL6J_1922647	Arhgap24	NCBI_Gene:231532,ENSEMBL:ENSMUSG00000057315	MGI:1922647	protein coding gene	Rho GTPase activating protein 24
5	pseudogene	102.41620	102.41695	positive	MGI_C57BL6J_5663069	Gm42932	ENSEMBL:ENSMUSG00000106295	MGI:5663069	pseudogene	predicted gene 42932
5	pseudogene	102.41622	102.42520	negative	MGI_C57BL6J_3644900	Gm6622	NCBI_Gene:625780	MGI:3644900	pseudogene	predicted gene 6622
5	gene	102.47429	102.48329	negative	MGI_C57BL6J_1922755	1700013M08Rik	ENSEMBL:ENSMUSG00000106586	MGI:1922755	lncRNA gene	RIKEN cDNA 1700013M08 gene
5	gene	102.61964	102.63486	negative	MGI_C57BL6J_5589555	Gm30396	NCBI_Gene:102632275	MGI:5589555	lncRNA gene	predicted gene, 30396
5	gene	102.72513	102.72583	negative	MGI_C57BL6J_1920214	2900056B19Rik	NA	NA	unclassified gene	RIKEN cDNA 2900056B19 gene
5	pseudogene	102.90795	103.21143	negative	MGI_C57BL6J_1346863	Mapk10	NCBI_Gene:26414,ENSEMBL:ENSMUSG00000046709	MGI:1346863	polymorphic pseudogene	mitogen-activated protein kinase 10
5	pseudogene	102.95182	102.95207	negative	MGI_C57BL6J_5662659	Gm42522	ENSEMBL:ENSMUSG00000105253	MGI:5662659	pseudogene	predicted gene 42522
5	gene	102.98384	102.98631	negative	MGI_C57BL6J_5663926	Gm43789	ENSEMBL:ENSMUSG00000105947	MGI:5663926	unclassified gene	predicted gene 43789
5	gene	103.20275	103.20355	negative	MGI_C57BL6J_1920225	2900063K03Rik	NA	NA	unclassified gene	RIKEN cDNA 2900063K03 gene
5	gene	103.23037	103.29903	negative	MGI_C57BL6J_1921874	4930429D17Rik	NCBI_Gene:74624,ENSEMBL:ENSMUSG00000104956	MGI:1921874	lncRNA gene	RIKEN cDNA 4930429D17 gene
5	pseudogene	103.27387	103.27450	positive	MGI_C57BL6J_5010887	Gm18702	NCBI_Gene:100417590,ENSEMBL:ENSMUSG00000104688	MGI:5010887	pseudogene	predicted gene, 18702
5	gene	103.34397	103.34511	positive	MGI_C57BL6J_5662756	Gm42619	ENSEMBL:ENSMUSG00000104808	MGI:5662756	unclassified gene	predicted gene 42619
5	gene	103.34397	103.34511	negative	MGI_C57BL6J_1918176	4921523P09Rik	NA	NA	unclassified gene	RIKEN cDNA 4921523P09 gene
5	gene	103.34654	103.34830	positive	MGI_C57BL6J_1922769	1700021F02Rik	NCBI_Gene:75519,ENSEMBL:ENSMUSG00000105426	MGI:1922769	lncRNA gene	RIKEN cDNA 1700021F02 gene
5	gene	103.35431	103.35670	negative	MGI_C57BL6J_2441699	5430427N15Rik	ENSEMBL:ENSMUSG00000104684	MGI:2441699	lncRNA gene	RIKEN cDNA 5430427N15 gene
5	gene	103.35998	103.36075	positive	MGI_C57BL6J_5589602	Gm30443	NCBI_Gene:102632347	MGI:5589602	lncRNA gene	predicted gene, 30443
5	gene	103.42519	103.59836	positive	MGI_C57BL6J_103293	Ptpn13	NCBI_Gene:19249,ENSEMBL:ENSMUSG00000034573	MGI:103293	protein coding gene	protein tyrosine phosphatase, non-receptor type 13
5	gene	103.51345	103.53302	negative	MGI_C57BL6J_5662757	Gm42620	ENSEMBL:ENSMUSG00000104580	MGI:5662757	lncRNA gene	predicted gene 42620
5	gene	103.60259	103.60288	positive	MGI_C57BL6J_5452862	Gm23085	ENSEMBL:ENSMUSG00000088474	MGI:5452862	unclassified non-coding RNA gene	predicted gene, 23085
5	gene	103.60571	103.62940	negative	MGI_C57BL6J_1923000	Slc10a6	NCBI_Gene:75750,ENSEMBL:ENSMUSG00000029321	MGI:1923000	protein coding gene	solute carrier family 10 (sodium/bile acid cotransporter family), member 6
5	pseudogene	103.62447	103.62505	positive	MGI_C57BL6J_3802079	Gm15844	ENSEMBL:ENSMUSG00000084126	MGI:3802079	pseudogene	predicted gene 15844
5	gene	103.63523	103.63617	positive	MGI_C57BL6J_5663683	Gm43546	ENSEMBL:ENSMUSG00000105018	MGI:5663683	unclassified gene	predicted gene 43546
5	gene	103.64804	103.65601	negative	MGI_C57BL6J_1921468	1700016H13Rik	NCBI_Gene:74218,ENSEMBL:ENSMUSG00000029320	MGI:1921468	protein coding gene	RIKEN cDNA 1700016H13 gene
5	gene	103.65608	103.66657	positive	MGI_C57BL6J_5625023	Gm42138	NCBI_Gene:105246944	MGI:5625023	lncRNA gene	predicted gene, 42138
5	gene	103.65824	103.65841	positive	MGI_C57BL6J_5455498	Gm25721	ENSEMBL:ENSMUSG00000088121	MGI:5455498	snRNA gene	predicted gene, 25721
5	gene	103.69233	103.85532	positive	MGI_C57BL6J_1100819	Aff1	NCBI_Gene:17355,ENSEMBL:ENSMUSG00000029313	MGI:1100819	protein coding gene	AF4/FMR2 family, member 1
5	gene	103.86197	103.91127	negative	MGI_C57BL6J_2179430	Klhl8	NCBI_Gene:246293,ENSEMBL:ENSMUSG00000029312	MGI:2179430	protein coding gene	kelch-like 8
5	gene	103.87766	103.89153	positive	MGI_C57BL6J_5625024	Gm42139	NCBI_Gene:105246945	MGI:5625024	lncRNA gene	predicted gene, 42139
5	gene	103.87991	103.88023	negative	MGI_C57BL6J_5663684	Gm43547	ENSEMBL:ENSMUSG00000105019	MGI:5663684	unclassified gene	predicted gene 43547
5	gene	103.89888	103.89898	positive	MGI_C57BL6J_5454674	Gm24897	ENSEMBL:ENSMUSG00000095133	MGI:5454674	snRNA gene	predicted gene, 24897
5	gene	103.95544	103.97741	negative	MGI_C57BL6J_2140804	Hsd17b13	NCBI_Gene:243168,ENSEMBL:ENSMUSG00000034528	MGI:2140804	protein coding gene	hydroxysteroid (17-beta) dehydrogenase 13
5	pseudogene	103.98937	103.98959	positive	MGI_C57BL6J_3643346	Gm8200	ENSEMBL:ENSMUSG00000082527	MGI:3643346	pseudogene	predicted gene 8200
5	gene	103.98976	104.02192	negative	MGI_C57BL6J_2149821	Hsd17b11	NCBI_Gene:114664,ENSEMBL:ENSMUSG00000029311	MGI:2149821	protein coding gene	hydroxysteroid (17-beta) dehydrogenase 11
5	gene	104.04462	104.04740	negative	MGI_C57BL6J_5663682	Gm43545	ENSEMBL:ENSMUSG00000106035	MGI:5663682	unclassified gene	predicted gene 43545
5	gene	104.04631	104.06538	positive	MGI_C57BL6J_1921417	Nudt9	NCBI_Gene:74167,ENSEMBL:ENSMUSG00000029310	MGI:1921417	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 9
5	gene	104.04800	104.04806	positive	MGI_C57BL6J_5453643	Mir5619	miRBase:MI0019187,NCBI_Gene:100885831,ENSEMBL:ENSMUSG00000093690	MGI:5453643	miRNA gene	microRNA 5619
5	gene	104.07006	104.07761	negative	MGI_C57BL6J_4937294	Gm17660	NCBI_Gene:100271704,ENSEMBL:ENSMUSG00000091034	MGI:4937294	protein coding gene	predicted gene, 17660
5	gene	104.07006	104.07233	negative	MGI_C57BL6J_5663470	Gm43333	ENSEMBL:ENSMUSG00000105261	MGI:5663470	unclassified gene	predicted gene 43333
5	gene	104.07911	104.11409	negative	MGI_C57BL6J_108110	Sparcl1	NCBI_Gene:13602,ENSEMBL:ENSMUSG00000029309	MGI:108110	protein coding gene	SPARC-like 1
5	gene	104.10922	104.11969	positive	MGI_C57BL6J_5477197	Gm26703	ENSEMBL:ENSMUSG00000097877	MGI:5477197	lncRNA gene	predicted gene, 26703
5	pseudogene	104.14455	104.14630	negative	MGI_C57BL6J_3781336	Gm3157	NCBI_Gene:100041136	MGI:3781336	pseudogene	predicted gene 3157
5	gene	104.17070	104.18013	positive	MGI_C57BL6J_109172	Dspp	NCBI_Gene:666279,ENSEMBL:ENSMUSG00000053268	MGI:109172	protein coding gene	dentin sialophosphoprotein
5	gene	104.19756	104.21411	positive	MGI_C57BL6J_94910	Dmp1	NCBI_Gene:13406,ENSEMBL:ENSMUSG00000029307	MGI:94910	protein coding gene	dentin matrix protein 1
5	gene	104.23931	104.24691	negative	MGI_C57BL6J_5590207	Gm31048	NCBI_Gene:102633146,ENSEMBL:ENSMUSG00000105615	MGI:5590207	lncRNA gene	predicted gene, 31048
5	gene	104.29719	104.29730	positive	MGI_C57BL6J_5453393	Gm23616	ENSEMBL:ENSMUSG00000094432	MGI:5453393	miRNA gene	predicted gene, 23616
5	gene	104.29917	104.31147	positive	MGI_C57BL6J_96389	Ibsp	NCBI_Gene:15891,ENSEMBL:ENSMUSG00000029306	MGI:96389	protein coding gene	integrin binding sialoprotein
5	gene	104.32533	104.33861	positive	MGI_C57BL6J_2137384	Mepe	NCBI_Gene:94111,ENSEMBL:ENSMUSG00000053863	MGI:2137384	protein coding gene	matrix extracellular phosphoglycoprotein with ASARM motif (bone)
5	gene	104.43511	104.44105	positive	MGI_C57BL6J_98389	Spp1	NCBI_Gene:20750,ENSEMBL:ENSMUSG00000029304	MGI:98389	protein coding gene	secreted phosphoprotein 1
5	gene	104.43512	104.43637	positive	MGI_C57BL6J_5662930	Gm42793	ENSEMBL:ENSMUSG00000105954	MGI:5662930	unclassified gene	predicted gene 42793
5	gene	104.45400	104.50582	positive	MGI_C57BL6J_1099818	Pkd2	NCBI_Gene:18764,ENSEMBL:ENSMUSG00000034462	MGI:1099818	protein coding gene	polycystin 2, transient receptor potential cation channel
5	gene	104.45514	104.45580	negative	MGI_C57BL6J_3642129	Gm10047	NA	NA	protein coding gene	predicted gene 10047
5	gene	104.50835	104.55421	positive	MGI_C57BL6J_3040669	Thoc2l	NCBI_Gene:100042165,ENSEMBL:ENSMUSG00000079065,ENSEMBL:ENSMUSG00000097392,NCBI_Gene:100662	MGI:3040669	protein coding gene	THO complex subunit 2-like
5	gene	104.57078	104.63914	positive	MGI_C57BL6J_1916873	Zfp33b	NCBI_Gene:69623	MGI:1916873	protein coding gene	zinc finger protein 33B
5	pseudogene	104.58337	104.58410	negative	MGI_C57BL6J_5826567	Gm46930	NCBI_Gene:108169087	MGI:5826567	pseudogene	predicted gene, 46930
5	pseudogene	104.60154	104.60206	negative	MGI_C57BL6J_5825568	Gm45931	NCBI_Gene:106345154	MGI:5825568	pseudogene	predicted gene, 45931
5	gene	104.60394	104.60823	positive	MGI_C57BL6J_5590414	Gm31255	NA	NA	protein coding gene	predicted gene%2c 31255
5	pseudogene	104.64715	104.64769	negative	MGI_C57BL6J_5590504	Gm31345	NCBI_Gene:105243594	MGI:5590504	pseudogene	predicted gene, 31345
5	gene	104.66155	104.69207	positive	MGI_C57BL6J_5012570	Gm20385	NCBI_Gene:100505397	MGI:5012570	protein coding gene	predicted gene, 20385
5	pseudogene	104.70437	104.75248	negative	MGI_C57BL6J_3781375	Gm3196	NCBI_Gene:102633893	MGI:3781375	pseudogene	predicted gene 3196
5	gene	104.72297	104.75123	positive	MGI_C57BL6J_5590685	Gm31526	NCBI_Gene:102633782	MGI:5590685	protein coding gene	predicted gene, 31526
5	pseudogene	104.75676	104.75729	negative	MGI_C57BL6J_5012134	Gm19949	NCBI_Gene:100503900	MGI:5012134	pseudogene	predicted gene, 19949
5	pseudogene	104.77577	104.77940	positive	MGI_C57BL6J_3644429	Gm8258	NCBI_Gene:666726,ENSEMBL:ENSMUSG00000048334	MGI:3644429	pseudogene	predicted gene 8258
5	gene	104.80225	104.86016	negative	MGI_C57BL6J_2441896	Zfp951	NCBI_Gene:626391,ENSEMBL:ENSMUSG00000072774	MGI:2441896	protein coding gene	zinc finger protein 951
5	pseudogene	104.87487	104.87538	positive	MGI_C57BL6J_5825569	Gm45932	NCBI_Gene:106345155	MGI:5825569	pseudogene	predicted gene, 45932
5	pseudogene	104.87959	104.88039	positive	MGI_C57BL6J_5588873	Gm29714	NCBI_Gene:101055706	MGI:5588873	pseudogene	predicted gene, 29714
5	gene	104.88267	104.93495	negative	MGI_C57BL6J_5588875	Gm29716	NCBI_Gene:101055711	MGI:5588875	protein coding gene	predicted gene, 29716
5	gene	104.93505	104.98281	negative	MGI_C57BL6J_1351624	Abcg3	NCBI_Gene:27405,ENSEMBL:ENSMUSG00000029299	MGI:1351624	protein coding gene	ATP binding cassette subfamily G member 3
5	gene	104.93665	104.93676	positive	MGI_C57BL6J_5453874	Gm24097	ENSEMBL:ENSMUSG00000096561	MGI:5453874	snRNA gene	predicted gene, 24097
5	gene	104.97169	104.97206	negative	MGI_C57BL6J_5663993	Gm43856	ENSEMBL:ENSMUSG00000105555	MGI:5663993	unclassified gene	predicted gene 43856
5	pseudogene	104.98724	104.98774	negative	MGI_C57BL6J_5663992	Gm43855	ENSEMBL:ENSMUSG00000104899	MGI:5663992	pseudogene	predicted gene 43855
5	pseudogene	104.98887	104.98939	negative	MGI_C57BL6J_3644057	Gm5870	NCBI_Gene:545790,ENSEMBL:ENSMUSG00000106392	MGI:3644057	pseudogene	predicted pseudogene 5870
5	gene	105.01251	105.13954	negative	MGI_C57BL6J_1923324	Gbp8	NCBI_Gene:76074,ENSEMBL:ENSMUSG00000034438	MGI:1923324	protein coding gene	guanylate-binding protein 8
5	gene	105.07646	105.13954	negative	MGI_C57BL6J_3605620	Gbp9	NCBI_Gene:236573,ENSEMBL:ENSMUSG00000029298	MGI:3605620	protein coding gene	guanylate-binding protein 9
5	gene	105.11577	105.13959	negative	MGI_C57BL6J_97072	Gbp4	NCBI_Gene:17472,ENSEMBL:ENSMUSG00000079363	MGI:97072	protein coding gene	guanylate binding protein 4
5	pseudogene	105.15784	105.18228	negative	MGI_C57BL6J_3780047	Gm9640	NCBI_Gene:675363	MGI:3780047	pseudogene	predicted gene 9640
5	gene	105.19843	105.21837	positive	MGI_C57BL6J_5590944	Gm31785	NCBI_Gene:102634124	MGI:5590944	lncRNA gene	predicted gene, 31785
5	gene	105.21491	105.29369	negative	MGI_C57BL6J_5663439	Gm43302	ENSEMBL:ENSMUSG00000079362	MGI:5663439	protein coding gene	predicted gene 43302
5	gene	105.21570	105.23953	negative	MGI_C57BL6J_4359647	Gbp10	NCBI_Gene:626578,ENSEMBL:ENSMUSG00000105096	MGI:4359647	protein coding gene	guanylate-binding protein 10
5	gene	105.27070	105.29587	negative	MGI_C57BL6J_2140937	Gbp6	NCBI_Gene:100702,ENSEMBL:ENSMUSG00000104713	MGI:2140937	protein coding gene	guanylate binding protein 6
5	pseudogene	105.32303	105.34648	negative	MGI_C57BL6J_3646307	Gbp11	NCBI_Gene:634650,ENSEMBL:ENSMUSG00000092021	MGI:3646307	polymorphic pseudogene	guanylate binding protein 11
5	gene	105.39891	105.40016	negative	MGI_C57BL6J_1924597	B230204H03Rik	NA	NA	unclassified gene	RIKEN cDNA B230204H03 gene
5	gene	105.40123	105.40697	positive	MGI_C57BL6J_5477013	Gm26519	NCBI_Gene:102634580,ENSEMBL:ENSMUSG00000097237	MGI:5477013	lncRNA gene	predicted gene, 26519
5	gene	105.40935	105.41567	positive	MGI_C57BL6J_5591210	Gm32051	NCBI_Gene:102634475,ENSEMBL:ENSMUSG00000106438	MGI:5591210	lncRNA gene	predicted gene, 32051
5	gene	105.41329	105.41531	negative	MGI_C57BL6J_1923077	4930542N06Rik	NCBI_Gene:75827	MGI:1923077	lncRNA gene	RIKEN cDNA 4930542N06 gene
5	gene	105.41577	105.49007	positive	MGI_C57BL6J_2141353	Lrrc8b	NCBI_Gene:433926,ENSEMBL:ENSMUSG00000070639	MGI:2141353	protein coding gene	leucine rich repeat containing 8 family, member B
5	gene	105.49542	105.49764	positive	MGI_C57BL6J_5625026	Gm42141	NCBI_Gene:105246948,ENSEMBL:ENSMUSG00000105826	MGI:5625026	lncRNA gene	predicted gene, 42141
5	gene	105.50188	105.50482	positive	MGI_C57BL6J_5625029	Gm42144	NCBI_Gene:105246951	MGI:5625029	lncRNA gene	predicted gene, 42144
5	gene	105.50224	105.50955	negative	MGI_C57BL6J_5625027	Gm42142	NCBI_Gene:105246949	MGI:5625027	lncRNA gene	predicted gene, 42142
5	gene	105.51935	105.61302	positive	MGI_C57BL6J_2140839	Lrrc8c	NCBI_Gene:100604,ENSEMBL:ENSMUSG00000054720	MGI:2140839	protein coding gene	leucine rich repeat containing 8 family, member C
5	gene	105.58044	105.58177	positive	MGI_C57BL6J_2141339	C230066G23Rik	ENSEMBL:ENSMUSG00000085771	MGI:2141339	lncRNA gene	RIKEN cDNA C230066G23 gene
5	gene	105.64011	105.64380	negative	MGI_C57BL6J_5591389	Gm32230	NCBI_Gene:102634711	MGI:5591389	lncRNA gene	predicted gene, 32230
5	gene	105.65131	105.66243	positive	MGI_C57BL6J_5591435	Gm32276	NCBI_Gene:102634773	MGI:5591435	lncRNA gene	predicted gene, 32276
5	gene	105.69370	105.70472	negative	MGI_C57BL6J_5625051	Gm42166	NCBI_Gene:105246978	MGI:5625051	protein coding gene	predicted gene, 42166
5	gene	105.69997	105.83244	positive	MGI_C57BL6J_1922368	Lrrc8d	NCBI_Gene:231549,ENSEMBL:ENSMUSG00000046079	MGI:1922368	protein coding gene	leucine rich repeat containing 8D
5	pseudogene	105.79729	105.79776	negative	MGI_C57BL6J_3642245	Rps15a-ps5	NCBI_Gene:100042335,ENSEMBL:ENSMUSG00000067058	MGI:3642245	pseudogene	ribosomal protein S15A, pseudogene 5
5	gene	105.81477	105.81899	negative	MGI_C57BL6J_3802116	Lrrc8dos	ENSEMBL:ENSMUSG00000084878	MGI:3802116	antisense lncRNA gene	leucine rich repeat containing 8D, opposite strand
5	gene	105.82656	105.83244	positive	MGI_C57BL6J_2444658	D830014E11Rik	NCBI_Gene:320751	MGI:2444658	unclassified gene	RIKEN cDNA D830014E11 gene
5	pseudogene	105.86252	105.86372	negative	MGI_C57BL6J_3708724	Gm10359	NCBI_Gene:100042349,ENSEMBL:ENSMUSG00000094708	MGI:3708724	pseudogene	predicted gene 10359
5	pseudogene	105.86636	105.86683	positive	MGI_C57BL6J_5663955	Gm43818	ENSEMBL:ENSMUSG00000105074	MGI:5663955	pseudogene	predicted gene 43818
5	gene	105.86637	105.86678	negative	MGI_C57BL6J_1920611	1700061D13Rik	NA	NA	unclassified gene	RIKEN cDNA 1700061D13 gene
5	gene	105.87656	105.91582	positive	MGI_C57BL6J_1927246	Zfp326	NCBI_Gene:54367,ENSEMBL:ENSMUSG00000029290	MGI:1927246	protein coding gene	zinc finger protein 326
5	gene	105.87958	105.88184	positive	MGI_C57BL6J_5663954	Gm43817	ENSEMBL:ENSMUSG00000105341	MGI:5663954	unclassified gene	predicted gene 43817
5	gene	105.95867	105.96143	positive	MGI_C57BL6J_1921286	4632409D06Rik	NA	NA	unclassified gene	RIKEN cDNA 4632409D06 gene
5	pseudogene	105.98056	105.98177	negative	MGI_C57BL6J_5011751	Gm19566	NCBI_Gene:100503127,ENSEMBL:ENSMUSG00000105129	MGI:5011751	pseudogene	predicted gene, 19566
5	gene	106.07233	106.07243	negative	MGI_C57BL6J_5455449	Gm25672	ENSEMBL:ENSMUSG00000095052	MGI:5455449	snRNA gene	predicted gene, 25672
5	gene	106.09494	106.11215	positive	MGI_C57BL6J_5591895	Gm32736	NCBI_Gene:102635379,ENSEMBL:ENSMUSG00000106483	MGI:5591895	lncRNA gene	predicted gene, 32736
5	pseudogene	106.21554	106.21730	positive	MGI_C57BL6J_3644525	Gm5987	NCBI_Gene:546882,ENSEMBL:ENSMUSG00000105600	MGI:3644525	pseudogene	predicted gene 5987
5	pseudogene	106.27221	106.27307	positive	MGI_C57BL6J_5621318	Gm38433	NCBI_Gene:101055736,ENSEMBL:ENSMUSG00000106669	MGI:5621318	pseudogene	predicted gene, 38433
5	gene	106.29534	106.32249	negative	MGI_C57BL6J_5592132	Gm32973	NCBI_Gene:102635702	MGI:5592132	lncRNA gene	predicted gene, 32973
5	gene	106.32134	106.32322	positive	MGI_C57BL6J_5592080	Gm32921	NCBI_Gene:102635633,ENSEMBL:ENSMUSG00000105508	MGI:5592080	lncRNA gene	predicted gene, 32921
5	gene	106.34386	106.36423	positive	MGI_C57BL6J_2685681	4930458A03Rik	NCBI_Gene:330146,ENSEMBL:ENSMUSG00000105531	MGI:2685681	lncRNA gene	RIKEN cDNA 4930458A03 gene
5	pseudogene	106.35536	106.35568	negative	MGI_C57BL6J_5663052	Gm42915	ENSEMBL:ENSMUSG00000104604	MGI:5663052	pseudogene	predicted gene 42915
5	gene	106.36456	106.36685	negative	MGI_C57BL6J_1921031	4930432H08Rik	ENSEMBL:ENSMUSG00000106594	MGI:1921031	lncRNA gene	RIKEN cDNA 4930432H08 gene
5	gene	106.36901	106.37082	positive	MGI_C57BL6J_5592260	Gm33101	NA	NA	lncRNA gene	predicted gene%2c 33101
5	gene	106.36901	106.37082	positive	MGI_C57BL6J_5663053	Gm42916	ENSEMBL:ENSMUSG00000105618	MGI:5663053	lncRNA gene	predicted gene 42916
5	gene	106.45252	106.45817	negative	MGI_C57BL6J_1859314	Barhl2	NCBI_Gene:104382,ENSEMBL:ENSMUSG00000034384	MGI:1859314	protein coding gene	BarH like homeobox 2
5	gene	106.45859	106.45974	positive	MGI_C57BL6J_5592310	Gm33151	NCBI_Gene:102635942	MGI:5592310	lncRNA gene	predicted gene, 33151
5	gene	106.46580	106.47101	negative	MGI_C57BL6J_5477366	Gm26872	ENSEMBL:ENSMUSG00000097018	MGI:5477366	lncRNA gene	predicted gene, 26872
5	gene	106.50089	106.57472	negative	MGI_C57BL6J_5547786	Gm28050	NCBI_Gene:102636013,ENSEMBL:ENSMUSG00000099061	MGI:5547786	lncRNA gene	predicted gene, 28050
5	gene	106.51988	106.52882	positive	MGI_C57BL6J_5592442	Gm33283	NCBI_Gene:102636121	MGI:5592442	lncRNA gene	predicted gene, 33283
5	gene	106.55773	106.57891	negative	MGI_C57BL6J_3646046	Gm8350	NCBI_Gene:666892	MGI:3646046	unclassified gene	predicted gene 8350
5	gene	106.55795	106.69657	negative	MGI_C57BL6J_5547775	Gm28039	ENSEMBL:ENSMUSG00000098302	MGI:5547775	lncRNA gene	predicted gene, 28039
5	gene	106.57488	106.57539	positive	MGI_C57BL6J_5580170	Gm29464	ENSEMBL:ENSMUSG00000101237	MGI:5580170	lncRNA gene	predicted gene 29464
5	gene	106.59298	106.60817	negative	MGI_C57BL6J_5625030	Gm42145	NCBI_Gene:105246952	MGI:5625030	lncRNA gene	predicted gene, 42145
5	gene	106.60910	106.60920	positive	MGI_C57BL6J_4936938	Gm17304	ENSEMBL:ENSMUSG00000091096	MGI:4936938	protein coding gene	predicted gene, 17304
5	pseudogene	106.61029	106.61103	positive	MGI_C57BL6J_5010122	Gm17937	NCBI_Gene:100416139,ENSEMBL:ENSMUSG00000106142	MGI:5010122	pseudogene	predicted gene, 17937
5	gene	106.61674	106.69729	negative	MGI_C57BL6J_1277212	Zfp644	NCBI_Gene:52397,ENSEMBL:ENSMUSG00000049606	MGI:1277212	protein coding gene	zinc finger protein 644
5	gene	106.65281	106.65571	negative	MGI_C57BL6J_5663558	Gm43421	ENSEMBL:ENSMUSG00000104706	MGI:5663558	unclassified gene	predicted gene 43421
5	gene	106.67000	106.67012	positive	MGI_C57BL6J_5453968	Gm24191	ENSEMBL:ENSMUSG00000088602	MGI:5453968	snRNA gene	predicted gene, 24191
5	pseudogene	106.73792	106.73877	negative	MGI_C57BL6J_3647827	Gm8365	NCBI_Gene:666922,ENSEMBL:ENSMUSG00000106301	MGI:3647827	pseudogene	predicted gene 8365
5	gene	106.80202	106.81477	positive	MGI_C57BL6J_5592486	Gm33327	NCBI_Gene:102636192	MGI:5592486	lncRNA gene	predicted gene, 33327
5	gene	106.84019	106.92657	negative	MGI_C57BL6J_3036246	Hfm1	NCBI_Gene:330149,ENSEMBL:ENSMUSG00000043410	MGI:3036246	protein coding gene	HFM1, ATP-dependent DNA helicase homolog
5	gene	106.87960	106.87970	negative	MGI_C57BL6J_5530909	Gm27527	ENSEMBL:ENSMUSG00000098703	MGI:5530909	miRNA gene	predicted gene, 27527
5	pseudogene	106.90673	106.90698	positive	MGI_C57BL6J_3030553	Olfr719-ps	NCBI_Gene:404418,ENSEMBL:ENSMUSG00000067047	MGI:3030553	pseudogene	olfactory receptor 719, pseudogene
5	gene	106.96431	106.98444	positive	MGI_C57BL6J_1309511	Cdc7	NCBI_Gene:12545,ENSEMBL:ENSMUSG00000029283	MGI:1309511	protein coding gene	cell division cycle 7 (S. cerevisiae)
5	gene	107.04171	107.04566	negative	MGI_C57BL6J_5592530	Gm33371	NCBI_Gene:102636252	MGI:5592530	lncRNA gene	predicted gene, 33371
5	gene	107.04858	107.07881	positive	MGI_C57BL6J_5592633	Gm33474	NCBI_Gene:102636399,ENSEMBL:ENSMUSG00000106554	MGI:5592633	lncRNA gene	predicted gene, 33474
5	gene	107.08572	107.09447	negative	MGI_C57BL6J_5625031	Gm42146	NCBI_Gene:105246953	MGI:5625031	lncRNA gene	predicted gene, 42146
5	gene	107.10657	107.28963	negative	MGI_C57BL6J_104637	Tgfbr3	NCBI_Gene:21814,ENSEMBL:ENSMUSG00000029287	MGI:104637	protein coding gene	transforming growth factor, beta receptor III
5	gene	107.13212	107.13569	negative	MGI_C57BL6J_5663559	Gm43422	ENSEMBL:ENSMUSG00000106643	MGI:5663559	unclassified gene	predicted gene 43422
5	gene	107.15848	107.16057	negative	MGI_C57BL6J_5663560	Gm43423	ENSEMBL:ENSMUSG00000105033	MGI:5663560	unclassified gene	predicted gene 43423
5	pseudogene	107.23892	107.24252	positive	MGI_C57BL6J_3644272	Gm8145	NCBI_Gene:108169058,ENSEMBL:ENSMUSG00000084218	MGI:3644272	pseudogene	predicted gene 8145
5	gene	107.25434	107.25650	negative	MGI_C57BL6J_5663037	Gm42900	ENSEMBL:ENSMUSG00000106671	MGI:5663037	unclassified gene	predicted gene 42900
5	gene	107.30295	107.30305	positive	MGI_C57BL6J_5452334	Gm22557	ENSEMBL:ENSMUSG00000088429	MGI:5452334	snRNA gene	predicted gene, 22557
5	gene	107.33108	107.38706	positive	MGI_C57BL6J_1891374	Brdt	NCBI_Gene:114642,ENSEMBL:ENSMUSG00000029279	MGI:1891374	protein coding gene	bromodomain, testis-specific
5	gene	107.37099	107.43191	negative	MGI_C57BL6J_4938029	Gm17202	NCBI_Gene:102636836,ENSEMBL:ENSMUSG00000090558	MGI:4938029	lncRNA gene	predicted gene 17202
5	pseudogene	107.38129	107.38207	negative	MGI_C57BL6J_3644504	Gm8152	NCBI_Gene:108169059,ENSEMBL:ENSMUSG00000081798	MGI:3644504	pseudogene	predicted gene 8152
5	gene	107.39273	107.40348	negative	MGI_C57BL6J_5663039	Gm42902	ENSEMBL:ENSMUSG00000106396	MGI:5663039	lncRNA gene	predicted gene 42902
5	gene	107.40132	107.40144	positive	MGI_C57BL6J_4422038	n-R5s173	ENSEMBL:ENSMUSG00000064554	MGI:4422038	rRNA gene	nuclear encoded rRNA 5S 173
5	gene	107.40274	107.43004	positive	MGI_C57BL6J_2686228	Ephx4	NCBI_Gene:384214,ENSEMBL:ENSMUSG00000033805	MGI:2686228	protein coding gene	epoxide hydrolase 4
5	gene	107.43155	107.43504	positive	MGI_C57BL6J_1918152	Lpcat2b	NCBI_Gene:70902,ENSEMBL:ENSMUSG00000033794	MGI:1918152	protein coding gene	lysophosphatidylcholine acyltransferase 2B
5	gene	107.43800	107.51121	positive	MGI_C57BL6J_3646208	Btbd8	NCBI_Gene:100503185,ENSEMBL:ENSMUSG00000111375	MGI:3646208	protein coding gene	BTB (POZ) domain containing 8
5	gene	107.46155	107.47208	negative	MGI_C57BL6J_5593044	Gm33885	NCBI_Gene:102636959	MGI:5593044	lncRNA gene	predicted gene, 33885
5	pseudogene	107.47833	107.47913	negative	MGI_C57BL6J_3779431	Gm9727	NCBI_Gene:72342,ENSEMBL:ENSMUSG00000089628	MGI:3779431	pseudogene	predicted gene 9727
5	gene	107.49774	107.51256	positive	MGI_C57BL6J_2445097	A830010M20Rik	NCBI_Gene:231570	MGI:2445097	protein coding gene	RIKEN cDNA A830010M20 gene
5	gene	107.50762	107.58060	positive	MGI_C57BL6J_5662806	Gm42669	ENSEMBL:ENSMUSG00000106631	MGI:5662806	protein coding gene	predicted gene 42669
5	gene	107.53471	107.55154	positive	MGI_C57BL6J_1923671	1700028K03Rik	NCBI_Gene:76421,ENSEMBL:ENSMUSG00000089798	MGI:1923671	protein coding gene	RIKEN cDNA 1700028K03 gene
5	gene	107.54897	107.59789	negative	MGI_C57BL6J_2141180	Glmn	NCBI_Gene:170823,ENSEMBL:ENSMUSG00000029276	MGI:2141180	protein coding gene	glomulin, FKBP associated protein
5	gene	107.59737	107.66185	positive	MGI_C57BL6J_2141142	Rpap2	NCBI_Gene:231571,ENSEMBL:ENSMUSG00000033773	MGI:2141142	protein coding gene	RNA polymerase II associated protein 2
5	gene	107.63025	107.63385	negative	MGI_C57BL6J_1925693	A930041C12Rik	NCBI_Gene:78443,ENSEMBL:ENSMUSG00000085900	MGI:1925693	lncRNA gene	RIKEN cDNA A930041C12 gene
5	gene	107.65601	107.65744	negative	MGI_C57BL6J_1923361	5830490A12Rik	NA	NA	unclassified gene	RIKEN cDNA 5830490A12 gene
5	gene	107.65946	107.68801	negative	MGI_C57BL6J_5477186	Gm26692	ENSEMBL:ENSMUSG00000097035	MGI:5477186	lncRNA gene	predicted gene, 26692
5	gene	107.68817	107.68917	positive	MGI_C57BL6J_1923267	5830411K02Rik	ENSEMBL:ENSMUSG00000105421	MGI:1923267	unclassified gene	RIKEN cDNA 5830411K02 gene
5	gene	107.69821	107.70348	negative	MGI_C57BL6J_1923034	4930428O21Rik	NCBI_Gene:654809,ENSEMBL:ENSMUSG00000106333	MGI:1923034	lncRNA gene	RIKEN cDNA 4930428O21 gene
5	gene	107.71666	107.72604	negative	MGI_C57BL6J_103170	Gfi1	NCBI_Gene:14581,ENSEMBL:ENSMUSG00000029275	MGI:103170	protein coding gene	growth factor independent 1 transcription repressor
5	gene	107.72516	107.72880	positive	MGI_C57BL6J_3041214	A430072P03Rik	NCBI_Gene:414110,ENSEMBL:ENSMUSG00000090030	MGI:3041214	lncRNA gene	RIKEN cDNA A430072P03 gene
5	gene	107.73763	107.74126	negative	MGI_C57BL6J_5625032	Gm42147	NCBI_Gene:105246954	MGI:5625032	lncRNA gene	predicted gene, 42147
5	gene	107.74479	107.87511	negative	MGI_C57BL6J_104736	Evi5	NCBI_Gene:14020,ENSEMBL:ENSMUSG00000011831	MGI:104736	protein coding gene	ecotropic viral integration site 5
5	gene	107.80636	107.80771	negative	MGI_C57BL6J_5663730	Gm43593	ENSEMBL:ENSMUSG00000106288	MGI:5663730	unclassified gene	predicted gene 43593
5	gene	107.83010	107.83178	positive	MGI_C57BL6J_1920568	Ube2d2b	NCBI_Gene:73318,ENSEMBL:ENSMUSG00000063447	MGI:1920568	protein coding gene	ubiquitin-conjugating enzyme E2D 2B
5	pseudogene	107.84439	107.84467	positive	MGI_C57BL6J_3801785	Gm16007	ENSEMBL:ENSMUSG00000083609	MGI:3801785	pseudogene	predicted gene 16007
5	gene	107.85007	107.85302	negative	MGI_C57BL6J_5625034	Gm42149	NCBI_Gene:105246956	MGI:5625034	lncRNA gene	predicted gene, 42149
5	gene	107.86847	107.86964	positive	MGI_C57BL6J_5663729	Gm43592	ENSEMBL:ENSMUSG00000104748	MGI:5663729	unclassified gene	predicted gene 43592
5	gene	107.90050	107.90900	positive	MGI_C57BL6J_102854	Rpl5	NCBI_Gene:100503670,ENSEMBL:ENSMUSG00000058558	MGI:102854	protein coding gene	ribosomal protein L5
5	gene	107.90456	107.90465	positive	MGI_C57BL6J_102855	Snord21	ENSEMBL:ENSMUSG00000064453	MGI:102855	snoRNA gene	small nucleolar RNA, C/D box 21
5	gene	107.90518	107.90531	positive	MGI_C57BL6J_5452047	Gm22270	ENSEMBL:ENSMUSG00000077222	MGI:5452047	snoRNA gene	predicted gene, 22270
5	gene	107.90735	107.90748	positive	MGI_C57BL6J_5456164	Gm26387	ENSEMBL:ENSMUSG00000077426	MGI:5456164	snoRNA gene	predicted gene, 26387
5	gene	107.90804	107.98708	negative	MGI_C57BL6J_1914516	Dipk1a	NCBI_Gene:67266,ENSEMBL:ENSMUSG00000029270	MGI:1914516	protein coding gene	divergent protein kinase domain 1A
5	gene	107.99142	108.00280	negative	MGI_C57BL6J_5625035	Gm42150	NCBI_Gene:105246957	MGI:5625035	lncRNA gene	predicted gene, 42150
5	pseudogene	108.00226	108.00249	positive	MGI_C57BL6J_3642875	Gm9850	ENSEMBL:ENSMUSG00000084855	MGI:3642875	pseudogene	predicted gene 9850
5	pseudogene	108.05546	108.05594	negative	MGI_C57BL6J_3780053	Rps19-ps8	NCBI_Gene:675566,ENSEMBL:ENSMUSG00000096920	MGI:3780053	pseudogene	ribosomal protein S19, pseudogene 8
5	gene	108.06567	108.10922	positive	MGI_C57BL6J_105050	Mtf2	NCBI_Gene:17765,ENSEMBL:ENSMUSG00000029267	MGI:105050	protein coding gene	metal response element binding transcription factor 2
5	gene	108.10637	108.13263	negative	MGI_C57BL6J_1921586	Tmed5	NCBI_Gene:73130,ENSEMBL:ENSMUSG00000063406	MGI:1921586	protein coding gene	transmembrane p24 trafficking protein 5
5	gene	108.13280	108.23363	positive	MGI_C57BL6J_1922974	Ccdc18	NCBI_Gene:73254,ENSEMBL:ENSMUSG00000056531	MGI:1922974	protein coding gene	coiled-coil domain containing 18
5	pseudogene	108.14502	108.14692	negative	MGI_C57BL6J_3648119	Gm7118	NCBI_Gene:633606,ENSEMBL:ENSMUSG00000105554	MGI:3648119	pseudogene	predicted gene 7118
5	pseudogene	108.15359	108.15490	negative	MGI_C57BL6J_3646277	Gm8190	NCBI_Gene:666614,ENSEMBL:ENSMUSG00000105188	MGI:3646277	pseudogene	predicted gene 8190
5	pseudogene	108.21096	108.21143	negative	MGI_C57BL6J_5663220	Gm43083	ENSEMBL:ENSMUSG00000105591	MGI:5663220	pseudogene	predicted gene 43083
5	gene	108.26890	108.28053	positive	MGI_C57BL6J_1100515	Dr1	NCBI_Gene:13486,ENSEMBL:ENSMUSG00000029265	MGI:1100515	protein coding gene	down-regulator of transcription 1
5	gene	108.31137	108.31275	negative	MGI_C57BL6J_5663218	Gm43081	ENSEMBL:ENSMUSG00000106103	MGI:5663218	unclassified gene	predicted gene 43081
5	gene	108.31261	108.34936	positive	MGI_C57BL6J_3576484	Pigg	NCBI_Gene:433931,ENSEMBL:ENSMUSG00000029263	MGI:3576484	protein coding gene	phosphatidylinositol glycan anchor biosynthesis, class G
5	gene	108.35413	108.36389	positive	MGI_C57BL6J_1924810	9330198I05Rik	NCBI_Gene:77560,ENSEMBL:ENSMUSG00000104904	MGI:1924810	lncRNA gene	RIKEN cDNA 9330198I05 gene
5	gene	108.36404	108.36497	negative	MGI_C57BL6J_5662655	Gm42518	ENSEMBL:ENSMUSG00000106304	MGI:5662655	lncRNA gene	predicted gene 42518
5	gene	108.36607	108.36792	negative	MGI_C57BL6J_5662654	Gm42517	ENSEMBL:ENSMUSG00000105867	MGI:5662654	protein coding gene	predicted gene 42517
5	gene	108.36777	108.37824	positive	MGI_C57BL6J_3642823	Gm10419	NCBI_Gene:100503802,ENSEMBL:ENSMUSG00000072769	MGI:3642823	lncRNA gene	predicted gene 10419
5	gene	108.38837	108.43240	positive	MGI_C57BL6J_97525	Pde6b	NCBI_Gene:18587,ENSEMBL:ENSMUSG00000029491	MGI:97525	protein coding gene	phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
5	gene	108.40203	108.40557	negative	MGI_C57BL6J_5593413	Gm34254	NCBI_Gene:102637449	MGI:5593413	lncRNA gene	predicted gene, 34254
5	gene	108.42193	108.42689	negative	MGI_C57BL6J_5593363	Gm34204	NCBI_Gene:102637376	MGI:5593363	lncRNA gene	predicted gene, 34204
5	gene	108.43324	108.43445	negative	MGI_C57BL6J_106636	Atp5k	NCBI_Gene:11958,ENSEMBL:ENSMUSG00000050856	MGI:106636	protein coding gene	ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E
5	gene	108.43453	108.44160	positive	MGI_C57BL6J_5593478	Gm34319	NCBI_Gene:102637535	MGI:5593478	lncRNA gene	predicted gene, 34319
5	gene	108.44105	108.45026	negative	MGI_C57BL6J_2442629	Mfsd7a	NCBI_Gene:243197,ENSEMBL:ENSMUSG00000029490	MGI:2442629	protein coding gene	major facilitator superfamily domain containing 7A
5	gene	108.46121	108.50698	positive	MGI_C57BL6J_1916837	Pcgf3	NCBI_Gene:69587,ENSEMBL:ENSMUSG00000033623	MGI:1916837	protein coding gene	polycomb group ring finger 3
5	pseudogene	108.51711	108.51757	positive	MGI_C57BL6J_3642342	Gm10086	NCBI_Gene:100042557,ENSEMBL:ENSMUSG00000060730	MGI:3642342	pseudogene	predicted pseudogene 10086
5	gene	108.51855	108.55003	negative	MGI_C57BL6J_104727	Cplx1	NCBI_Gene:12889,ENSEMBL:ENSMUSG00000033615	MGI:104727	protein coding gene	complexin 1
5	gene	108.55008	108.55335	positive	MGI_C57BL6J_3782080	Gm3907	NA	NA	unclassified gene	predicted gene 3907
5	gene	108.55008	108.55335	negative	MGI_C57BL6J_5663501	Gm43364	ENSEMBL:ENSMUSG00000105590	MGI:5663501	unclassified gene	predicted gene 43364
5	gene	108.56911	108.62978	negative	MGI_C57BL6J_2442153	Gak	NCBI_Gene:231580,ENSEMBL:ENSMUSG00000062234	MGI:2442153	protein coding gene	cyclin G associated kinase
5	gene	108.59852	108.60063	negative	MGI_C57BL6J_5663502	Gm43365	ENSEMBL:ENSMUSG00000105084	MGI:5663502	unclassified gene	predicted gene 43365
5	gene	108.62975	108.64878	positive	MGI_C57BL6J_1919642	Tmem175	NCBI_Gene:72392,ENSEMBL:ENSMUSG00000013495	MGI:1919642	protein coding gene	transmembrane protein 175
5	gene	108.64482	108.64510	positive	MGI_C57BL6J_1915659	0710007G10Rik	NA	NA	unclassified gene	RIKEN cDNA 0710007G10 gene
5	gene	108.64669	108.66967	negative	MGI_C57BL6J_102918	Dgkq	NCBI_Gene:110524,ENSEMBL:ENSMUSG00000004815	MGI:102918	protein coding gene	diacylglycerol kinase, theta
5	gene	108.66033	108.68545	positive	MGI_C57BL6J_96418	Idua	NCBI_Gene:15932,ENSEMBL:ENSMUSG00000033540	MGI:96418	protein coding gene	iduronidase, alpha-L
5	gene	108.66988	108.67810	negative	MGI_C57BL6J_2385894	Slc26a1	NCBI_Gene:231583,ENSEMBL:ENSMUSG00000046959	MGI:2385894	protein coding gene	solute carrier family 26 (sulfate transporter), member 1
5	gene	108.68390	108.69414	negative	MGI_C57BL6J_5625036	Gm42151	NCBI_Gene:105246959	MGI:5625036	lncRNA gene	predicted gene, 42151
5	gene	108.69238	108.70695	positive	MGI_C57BL6J_2150920	Fgfrl1	NCBI_Gene:116701,ENSEMBL:ENSMUSG00000008090	MGI:2150920	protein coding gene	fibroblast growth factor receptor-like 1
5	gene	108.72810	108.77511	negative	MGI_C57BL6J_3645767	Rnf212	NCBI_Gene:671564,ENSEMBL:ENSMUSG00000055385	MGI:3645767	protein coding gene	ring finger protein 212
5	pseudogene	108.76019	108.76321	positive	MGI_C57BL6J_5826568	Gm46931	NCBI_Gene:108169088	MGI:5826568	pseudogene	predicted gene, 46931
5	gene	108.76384	108.76892	positive	MGI_C57BL6J_1920545	1700047L14Rik	NCBI_Gene:73295,ENSEMBL:ENSMUSG00000101762	MGI:1920545	lncRNA gene	RIKEN cDNA 1700047L14 gene
5	gene	108.77724	108.79536	negative	MGI_C57BL6J_1914616	Tmed11	NCBI_Gene:67366,ENSEMBL:ENSMUSG00000004821	MGI:1914616	protein coding gene	transmembrane p24 trafficking protein 11
5	gene	108.79184	108.80885	negative	MGI_C57BL6J_3642986	Vmn2r8	NCBI_Gene:627479,ENSEMBL:ENSMUSG00000090961	MGI:3642986	protein coding gene	vomeronasal 2, receptor 8
5	pseudogene	108.82172	108.82312	positive	MGI_C57BL6J_5010779	Gm18594	NCBI_Gene:100417407,ENSEMBL:ENSMUSG00000093756	MGI:5010779	pseudogene	predicted gene, 18594
5	gene	108.83527	108.85260	negative	MGI_C57BL6J_3643093	Vmn2r9	NCBI_Gene:435864,ENSEMBL:ENSMUSG00000091624	MGI:3643093	protein coding gene	vomeronasal 2, receptor 9
5	gene	108.84978	108.94942	positive	MGI_C57BL6J_5313076	Gm20629	NCBI_Gene:102637859,ENSEMBL:ENSMUSG00000093479	MGI:5313076	lncRNA gene	predicted gene 20629
5	gene	108.86483	108.86835	positive	MGI_C57BL6J_3642677	Gm10417	ENSEMBL:ENSMUSG00000103580	MGI:3642677	protein coding gene	predicted gene 10417
5	pseudogene	108.87265	108.89238	negative	MGI_C57BL6J_3761376	Vmn2r-ps21	NCBI_Gene:667087,ENSEMBL:ENSMUSG00000093510	MGI:3761376	pseudogene	vomeronasal 2, receptor, pseudogene 21
5	pseudogene	108.89458	108.90376	positive	MGI_C57BL6J_5662764	Gm42627	NCBI_Gene:108169102,ENSEMBL:ENSMUSG00000105808	MGI:5662764	pseudogene	predicted gene 42627
5	pseudogene	108.97168	108.97218	positive	MGI_C57BL6J_5011156	Gm18971	NCBI_Gene:100418057,ENSEMBL:ENSMUSG00000105193	MGI:5011156	pseudogene	predicted gene, 18971
5	pseudogene	108.97280	108.97589	positive	MGI_C57BL6J_5010780	Gm18595	NCBI_Gene:100417408,ENSEMBL:ENSMUSG00000093725	MGI:5010780	pseudogene	predicted gene, 18595
5	gene	108.99006	109.00653	negative	MGI_C57BL6J_1316730	Vmn2r10	NCBI_Gene:22307,ENSEMBL:ENSMUSG00000067010	MGI:1316730	protein coding gene	vomeronasal 2, receptor 10
5	pseudogene	109.01620	109.01697	negative	MGI_C57BL6J_3644058	Gm5871	NCBI_Gene:545792,ENSEMBL:ENSMUSG00000093545	MGI:3644058	pseudogene	predicted gene 5871
5	gene	109.04336	109.05957	negative	MGI_C57BL6J_3643806	Vmn2r11	NCBI_Gene:384219,ENSEMBL:ENSMUSG00000091450	MGI:3643806	protein coding gene	vomeronasal 2, receptor 11
5	gene	109.08382	109.09795	negative	MGI_C57BL6J_3761377	Vmn2r12	NCBI_Gene:627569,ENSEMBL:ENSMUSG00000090688	MGI:3761377	protein coding gene	vomeronasal 2, receptor 12
5	gene	109.15294	109.19220	negative	MGI_C57BL6J_3761379	Vmn2r13	NCBI_Gene:231589,ENSEMBL:ENSMUSG00000091635	MGI:3761379	protein coding gene	vomeronasal 2, receptor 13
5	gene	109.21153	109.22471	negative	MGI_C57BL6J_3649151	Vmn2r14	NCBI_Gene:231591,ENSEMBL:ENSMUSG00000091059	MGI:3649151	protein coding gene	vomeronasal 2, receptor 14
5	pseudogene	109.23654	109.23853	positive	MGI_C57BL6J_3647680	Gm8473	NCBI_Gene:667128,ENSEMBL:ENSMUSG00000093543	MGI:3647680	pseudogene	predicted gene 8473
5	gene	109.28567	109.29764	negative	MGI_C57BL6J_3649165	Vmn2r15	NCBI_Gene:211223,ENSEMBL:ENSMUSG00000091375	MGI:3649165	protein coding gene	vomeronasal 2, receptor 15
5	gene	109.33016	109.37025	positive	MGI_C57BL6J_3647194	Vmn2r16	NCBI_Gene:384220,ENSEMBL:ENSMUSG00000092080	MGI:3647194	protein coding gene	vomeronasal 2, receptor 16
5	pseudogene	109.39633	109.40209	positive	MGI_C57BL6J_3649028	Gm7171	NCBI_Gene:100416977,ENSEMBL:ENSMUSG00000093663	MGI:3649028	pseudogene	predicted gene 7171
5	gene	109.41969	109.45846	positive	MGI_C57BL6J_3647193	Vmn2r17	NCBI_Gene:384221,ENSEMBL:ENSMUSG00000091879	MGI:3647193	protein coding gene	vomeronasal 2, receptor 17
5	pseudogene	109.47340	109.47398	positive	MGI_C57BL6J_5010740	Gm18555	NCBI_Gene:100417355,ENSEMBL:ENSMUSG00000105303	MGI:5010740	pseudogene	predicted gene, 18555
5	pseudogene	109.52746	109.52947	negative	MGI_C57BL6J_3644909	Gm8488	NCBI_Gene:667159,ENSEMBL:ENSMUSG00000093688	MGI:3644909	pseudogene	predicted gene 8488
5	pseudogene	109.54858	109.55416	negative	MGI_C57BL6J_3779800	Gm8493	NCBI_Gene:667171,ENSEMBL:ENSMUSG00000106028	MGI:3779800	pseudogene	predicted gene 8493
5	gene	109.55471	109.55903	negative	MGI_C57BL6J_1889506	Crlf2	NCBI_Gene:57914,ENSEMBL:ENSMUSG00000033467	MGI:1889506	protein coding gene	cytokine receptor-like factor 2
5	pseudogene	109.56623	109.57327	negative	MGI_C57BL6J_3761466	Vmn2r-ps22	NCBI_Gene:671695	MGI:3761466	pseudogene	vomeronasal 2, receptor, pseudogene 22
5	pseudogene	109.57802	109.73145	negative	MGI_C57BL6J_3761467	Vmn2r-ps23	NCBI_Gene:636173,ENSEMBL:ENSMUSG00000094409	MGI:3761467	pseudogene	vomeronasal 2, receptor, pseudogene 23
5	gene	109.59908	109.59916	positive	MGI_C57BL6J_5531382	Gm28000	ENSEMBL:ENSMUSG00000098393	MGI:5531382	unclassified non-coding RNA gene	predicted gene, 28000
5	gene	109.67454	109.69104	negative	MGI_C57BL6J_1924450	5430403G16Rik	ENSEMBL:ENSMUSG00000072763	MGI:1924450	protein coding gene	RIKEN cDNA 5430403G16 gene
5	gene	109.67735	109.79657	negative	MGI_C57BL6J_1925270	4930522L14Rik	NCBI_Gene:100041734,ENSEMBL:ENSMUSG00000072762	MGI:1925270	protein coding gene	RIKEN cDNA 4930522L14 gene
5	pseudogene	109.75721	109.75795	negative	MGI_C57BL6J_3643536	Gm8508	NCBI_Gene:108169062,ENSEMBL:ENSMUSG00000049477	MGI:3643536	pseudogene	predicted gene 8508
5	gene	109.76941	109.79630	negative	MGI_C57BL6J_4361019	A430073D23Rik	ENSEMBL:ENSMUSG00000105471	MGI:4361019	lncRNA gene	RIKEN cDNA A430073D23 gene
5	pseudogene	109.83350	109.83415	negative	MGI_C57BL6J_3645037	Gm10416	NCBI_Gene:667213,ENSEMBL:ENSMUSG00000105044	MGI:3645037	pseudogene	predicted pseudogene 10416
5	gene	109.85919	109.86641	negative	MGI_C57BL6J_5594248	Gm35089	NCBI_Gene:102638554	MGI:5594248	lncRNA gene	predicted gene, 35089
5	gene	109.86669	109.88551	positive	MGI_C57BL6J_3642128	AB010352	NCBI_Gene:105246961	MGI:3642128	protein coding gene	cDNA sequence AB010352
5	gene	109.88623	109.89114	positive	MGI_C57BL6J_5477273	Gm26779	ENSEMBL:ENSMUSG00000097140	MGI:5477273	lncRNA gene	predicted gene, 26779
5	gene	109.90158	109.90370	negative	MGI_C57BL6J_5826555	Gm46918	NCBI_Gene:108169061	MGI:5826555	protein coding gene	predicted gene, 46918
5	gene	109.91996	109.92356	negative	MGI_C57BL6J_5477302	Gm26808	NCBI_Gene:102638769,ENSEMBL:ENSMUSG00000097489	MGI:5477302	lncRNA gene	predicted gene, 26808
5	gene	109.92340	109.94394	positive	MGI_C57BL6J_3709333	Gm15446	NCBI_Gene:100642166,ENSEMBL:ENSMUSG00000090015	MGI:3709333	protein coding gene	predicted gene 15446
5	gene	109.99551	109.99640	negative	MGI_C57BL6J_1922653	1010001B22Rik	ENSEMBL:ENSMUSG00000097863	MGI:1922653	lncRNA gene	RIKEN cDNA 1010001B22 gene
5	gene	109.99650	110.01227	positive	MGI_C57BL6J_1916754	Zfp932	NCBI_Gene:69504,ENSEMBL:ENSMUSG00000066613	MGI:1916754	protein coding gene	zinc finger protein 932
5	gene	110.04614	110.07251	negative	MGI_C57BL6J_4937289	Gm17655	NCBI_Gene:100504130,ENSEMBL:ENSMUSG00000090963	MGI:4937289	protein coding gene	predicted gene, 17655
5	gene	110.06951	110.09515	negative	MGI_C57BL6J_5594474	Gm35315	NCBI_Gene:102638847,ENSEMBL:ENSMUSG00000109771	MGI:5594474	protein coding gene	predicted gene, 35315
5	pseudogene	110.09682	110.09773	negative	MGI_C57BL6J_5826577	Gm46940	NCBI_Gene:108169114	MGI:5826577	pseudogene	predicted gene, 46940
5	gene	110.09952	110.10595	positive	MGI_C57BL6J_2685422	Plcxd1	NCBI_Gene:403178,ENSEMBL:ENSMUSG00000064247	MGI:2685422	protein coding gene	phosphatidylinositol-specific phospholipase C, X domain containing 1
5	gene	110.10398	110.10820	negative	MGI_C57BL6J_1306825	Gtpbp6	NCBI_Gene:107999,ENSEMBL:ENSMUSG00000033434	MGI:1306825	protein coding gene	GTP binding protein 6 (putative)
5	gene	110.11002	110.13154	positive	MGI_C57BL6J_2444933	Zfp605	NCBI_Gene:675812,ENSEMBL:ENSMUSG00000023284	MGI:2444933	protein coding gene	zinc finger protein 605
5	pseudogene	110.11770	110.11899	negative	MGI_C57BL6J_3705726	Gm15484	NCBI_Gene:102639044,ENSEMBL:ENSMUSG00000081865	MGI:3705726	pseudogene	predicted gene 15484
5	gene	110.13576	110.17197	positive	MGI_C57BL6J_2444898	Chfr	NCBI_Gene:231600,ENSEMBL:ENSMUSG00000014668	MGI:2444898	protein coding gene	checkpoint with forkhead and ring finger domains
5	gene	110.15349	110.15412	negative	MGI_C57BL6J_5663273	Gm43136	ENSEMBL:ENSMUSG00000105541	MGI:5663273	lncRNA gene	predicted gene 43136
5	gene	110.15440	110.17650	negative	MGI_C57BL6J_3783229	Gm15787	NCBI_Gene:100504007,ENSEMBL:ENSMUSG00000086247	MGI:3783229	lncRNA gene	predicted gene 15787
5	gene	110.17666	110.22647	positive	MGI_C57BL6J_96958	Golga3	NCBI_Gene:269682,ENSEMBL:ENSMUSG00000029502	MGI:96958	protein coding gene	golgi autoantigen, golgin subfamily a, 3
5	gene	110.20658	110.20729	positive	MGI_C57BL6J_5663275	Gm43138	ENSEMBL:ENSMUSG00000104720	MGI:5663275	lncRNA gene	predicted gene 43138
5	gene	110.22740	110.23072	negative	MGI_C57BL6J_3704253	5930411N13Rik	NCBI_Gene:105246962	MGI:3704253	lncRNA gene	RIKEN cDNA 5930411N13 gene
5	gene	110.23061	110.23120	negative	MGI_C57BL6J_5663274	Gm43137	ENSEMBL:ENSMUSG00000104970	MGI:5663274	lncRNA gene	predicted gene 43137
5	gene	110.23100	110.25665	positive	MGI_C57BL6J_1261856	Ankle2	NCBI_Gene:71782,ENSEMBL:ENSMUSG00000029501	MGI:1261856	protein coding gene	ankyrin repeat and LEM domain containing 2
5	gene	110.25913	110.26991	negative	MGI_C57BL6J_1919792	Pgam5	NCBI_Gene:72542,ENSEMBL:ENSMUSG00000029500	MGI:1919792	protein coding gene	phosphoglycerate mutase family member 5
5	gene	110.25916	110.26985	positive	MGI_C57BL6J_5477212	Gm26718	ENSEMBL:ENSMUSG00000097367	MGI:5477212	lncRNA gene	predicted gene, 26718
5	gene	110.26216	110.27727	positive	MGI_C57BL6J_3783230	Gm15788	ENSEMBL:ENSMUSG00000087439	MGI:3783230	lncRNA gene	predicted gene 15788
5	gene	110.27428	110.28619	negative	MGI_C57BL6J_107487	Pxmp2	NCBI_Gene:19301,ENSEMBL:ENSMUSG00000029499	MGI:107487	protein coding gene	peroxisomal membrane protein 2
5	gene	110.28631	110.33747	positive	MGI_C57BL6J_1196391	Pole	NCBI_Gene:18973,ENSEMBL:ENSMUSG00000007080	MGI:1196391	protein coding gene	polymerase (DNA directed), epsilon
5	gene	110.32803	110.32818	positive	MGI_C57BL6J_5456054	Gm26277	ENSEMBL:ENSMUSG00000087722	MGI:5456054	snoRNA gene	predicted gene, 26277
5	pseudogene	110.32820	110.32852	positive	MGI_C57BL6J_3783233	Gm15791	ENSEMBL:ENSMUSG00000081256	MGI:3783233	pseudogene	predicted gene 15791
5	gene	110.33121	110.33320	negative	MGI_C57BL6J_3783234	Gm15792	ENSEMBL:ENSMUSG00000085606	MGI:3783234	lncRNA gene	predicted gene 15792
5	gene	110.33981	110.34345	negative	MGI_C57BL6J_2665170	P2rx2	NCBI_Gene:231602,ENSEMBL:ENSMUSG00000029503	MGI:2665170	protein coding gene	purinergic receptor P2X, ligand-gated ion channel, 2
5	gene	110.34451	110.35609	positive	MGI_C57BL6J_2686525	Lrcol1	NCBI_Gene:381667,ENSEMBL:ENSMUSG00000072754	MGI:2686525	protein coding gene	leucine rich colipase-like 1
5	gene	110.36175	110.44860	negative	MGI_C57BL6J_1920907	Fbrsl1	NCBI_Gene:381668,ENSEMBL:ENSMUSG00000043323	MGI:1920907	protein coding gene	fibrosin-like 1
5	gene	110.36857	110.37023	negative	MGI_C57BL6J_2441793	A330095P18Rik	NA	NA	unclassified gene	RIKEN cDNA A330095P18 gene
5	gene	110.38584	110.38807	positive	MGI_C57BL6J_5477205	Gm26711	ENSEMBL:ENSMUSG00000097904	MGI:5477205	lncRNA gene	predicted gene, 26711
5	gene	110.40213	110.40403	negative	MGI_C57BL6J_3026938	D630050G16Rik	NA	NA	unclassified gene	RIKEN cDNA D630050G16 gene
5	gene	110.44799	110.44995	positive	MGI_C57BL6J_5662733	Gm42596	ENSEMBL:ENSMUSG00000105482	MGI:5662733	lncRNA gene	predicted gene 42596
5	pseudogene	110.48061	110.48538	negative	MGI_C57BL6J_5592155	Gm32996	NCBI_Gene:102635734,ENSEMBL:ENSMUSG00000105603	MGI:5592155	pseudogene	predicted gene, 32996
5	gene	110.51492	110.52598	positive	MGI_C57BL6J_2445162	A630023P12Rik	NCBI_Gene:231603,ENSEMBL:ENSMUSG00000048215	MGI:2445162	lncRNA gene	RIKEN cDNA A630023P12 gene
5	gene	110.54423	110.62138	positive	MGI_C57BL6J_2677965	Galnt9	NCBI_Gene:231605,ENSEMBL:ENSMUSG00000033316	MGI:2677965	protein coding gene	polypeptide N-acetylgalactosaminyltransferase 9
5	gene	110.64842	110.65342	negative	MGI_C57BL6J_2140843	Noc4l	NCBI_Gene:100608,ENSEMBL:ENSMUSG00000033294	MGI:2140843	protein coding gene	NOC4 like
5	gene	110.65343	110.66050	positive	MGI_C57BL6J_1916913	Ddx51	NCBI_Gene:69663,ENSEMBL:ENSMUSG00000029504	MGI:1916913	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
5	gene	110.66139	110.66300	positive	MGI_C57BL6J_5662732	Gm42595	ENSEMBL:ENSMUSG00000105161	MGI:5662732	lncRNA gene	predicted gene 42595
5	gene	110.66437	110.77089	negative	MGI_C57BL6J_1276124	Ep400	NCBI_Gene:75560,ENSEMBL:ENSMUSG00000029505	MGI:1276124	protein coding gene	E1A binding protein p400
5	gene	110.66608	110.66614	negative	MGI_C57BL6J_5531370	Mir7026	miRBase:MI0022875,NCBI_Gene:102466216,ENSEMBL:ENSMUSG00000099284	MGI:5531370	miRNA gene	microRNA 7026
5	gene	110.67712	110.67723	negative	MGI_C57BL6J_5452493	Gm22716	ENSEMBL:ENSMUSG00000095178	MGI:5452493	snRNA gene	predicted gene, 22716
5	gene	110.69205	110.69218	negative	MGI_C57BL6J_5455856	Gm26079	ENSEMBL:ENSMUSG00000077254	MGI:5455856	snoRNA gene	predicted gene, 26079
5	gene	110.75709	110.75719	positive	MGI_C57BL6J_5452360	Gm22583	ENSEMBL:ENSMUSG00000096238	MGI:5452360	snRNA gene	predicted gene, 22583
5	gene	110.77089	110.77926	positive	MGI_C57BL6J_3783008	Gm15559	NCBI_Gene:100504049,ENSEMBL:ENSMUSG00000086401	MGI:3783008	lncRNA gene	predicted gene 15559
5	gene	110.77367	110.78067	negative	MGI_C57BL6J_1929237	Pus1	NCBI_Gene:56361,ENSEMBL:ENSMUSG00000029507	MGI:1929237	protein coding gene	pseudouridine synthase 1
5	gene	110.77988	110.78113	positive	MGI_C57BL6J_5477009	Gm26515	NCBI_Gene:102639137,ENSEMBL:ENSMUSG00000097152	MGI:5477009	lncRNA gene	predicted gene, 26515
5	gene	110.78449	110.81012	negative	MGI_C57BL6J_1270126	Ulk1	NCBI_Gene:22241,ENSEMBL:ENSMUSG00000029512	MGI:1270126	protein coding gene	unc-51 like kinase 1
5	gene	110.82907	110.83980	negative	MGI_C57BL6J_2141135	Hscb	NCBI_Gene:100900,ENSEMBL:ENSMUSG00000043510	MGI:2141135	protein coding gene	HscB iron-sulfur cluster co-chaperone
5	gene	110.83980	110.87414	positive	MGI_C57BL6J_1355321	Chek2	NCBI_Gene:50883,ENSEMBL:ENSMUSG00000029521	MGI:1355321	protein coding gene	checkpoint kinase 2
5	pseudogene	110.87660	110.87727	positive	MGI_C57BL6J_5662916	Gm42779	ENSEMBL:ENSMUSG00000104602	MGI:5662916	pseudogene	predicted gene 42779
5	gene	110.87978	111.28978	positive	MGI_C57BL6J_2140873	Ttc28	NCBI_Gene:209683,ENSEMBL:ENSMUSG00000033209	MGI:2140873	protein coding gene	tetratricopeptide repeat domain 28
5	pseudogene	110.90524	110.90574	positive	MGI_C57BL6J_3801755	Gm15989	ENSEMBL:ENSMUSG00000081104	MGI:3801755	pseudogene	predicted gene 15989
5	gene	110.93010	110.94388	positive	MGI_C57BL6J_5595132	Gm35973	NCBI_Gene:102639730	MGI:5595132	lncRNA gene	predicted gene, 35973
5	gene	110.97867	110.97922	positive	MGI_C57BL6J_5662915	Gm42778	ENSEMBL:ENSMUSG00000105112	MGI:5662915	unclassified gene	predicted gene 42778
5	gene	111.00414	111.00425	positive	MGI_C57BL6J_3629658	Mir701	miRBase:MI0004685,NCBI_Gene:735278,ENSEMBL:ENSMUSG00000076163	MGI:3629658	miRNA gene	microRNA 701
5	pseudogene	111.00848	111.00885	negative	MGI_C57BL6J_3801756	Gm15988	ENSEMBL:ENSMUSG00000083771	MGI:3801756	pseudogene	predicted gene 15988
5	gene	111.02855	111.02929	positive	MGI_C57BL6J_5662917	Gm42780	ENSEMBL:ENSMUSG00000105890	MGI:5662917	unclassified gene	predicted gene 42780
5	gene	111.10940	111.11112	positive	MGI_C57BL6J_1914054	8430408J09Rik	NA	NA	unclassified gene	RIKEN cDNA 8430408J09 gene
5	gene	111.15831	111.16069	positive	MGI_C57BL6J_5663814	Gm43677	ENSEMBL:ENSMUSG00000106153	MGI:5663814	unclassified gene	predicted gene 43677
5	gene	111.19714	111.19768	positive	MGI_C57BL6J_5663813	Gm43676	ENSEMBL:ENSMUSG00000105027	MGI:5663813	unclassified gene	predicted gene 43676
5	gene	111.23247	111.23324	negative	MGI_C57BL6J_5594787	Gm35628	NCBI_Gene:102639280	MGI:5594787	lncRNA gene	predicted gene, 35628
5	gene	111.27498	111.27509	negative	MGI_C57BL6J_5530984	Gm27602	ENSEMBL:ENSMUSG00000099130	MGI:5530984	unclassified non-coding RNA gene	predicted gene, 27602
5	gene	111.32974	111.33063	negative	MGI_C57BL6J_5531062	Gm27680	ENSEMBL:ENSMUSG00000106374,ENSEMBL:ENSMUSG00000099219	MGI:5531062	unclassified non-coding RNA gene	predicted gene, 27680
5	gene	111.33070	111.38836	positive	MGI_C57BL6J_1927542	Pitpnb	NCBI_Gene:56305,ENSEMBL:ENSMUSG00000050017	MGI:1927542	protein coding gene	phosphatidylinositol transfer protein, beta
5	gene	111.35762	111.36348	positive	MGI_C57BL6J_5595186	Gm36027	NCBI_Gene:102639801	MGI:5595186	lncRNA gene	predicted gene, 36027
5	gene	111.38751	111.38829	negative	MGI_C57BL6J_5663255	Gm43118	ENSEMBL:ENSMUSG00000104559	MGI:5663255	lncRNA gene	predicted gene 43118
5	gene	111.39206	111.39573	positive	MGI_C57BL6J_3641856	Gm10405	NA	NA	unclassified gene	predicted gene 10405
5	gene	111.41736	111.45703	positive	MGI_C57BL6J_1261813	Mn1	NCBI_Gene:433938,ENSEMBL:ENSMUSG00000070576	MGI:1261813	protein coding gene	meningioma 1
5	gene	111.42359	111.42571	positive	MGI_C57BL6J_5663256	Gm43119	ENSEMBL:ENSMUSG00000106560	MGI:5663256	unclassified gene	predicted gene 43119
5	gene	111.46819	111.47085	positive	MGI_C57BL6J_5625040	Gm42155	NCBI_Gene:105246965	MGI:5625040	lncRNA gene	predicted gene, 42155
5	gene	111.47074	111.47422	negative	MGI_C57BL6J_5625039	Gm42154	NCBI_Gene:105246964	MGI:5625039	lncRNA gene	predicted gene, 42154
5	gene	111.49088	111.49262	positive	MGI_C57BL6J_5595308	Gm36149	NCBI_Gene:102639960	MGI:5595308	lncRNA gene	predicted gene, 36149
5	gene	111.50928	111.51227	positive	MGI_C57BL6J_5595382	Gm36223	NCBI_Gene:102640066	MGI:5595382	lncRNA gene	predicted gene, 36223
5	gene	111.55722	111.56213	negative	MGI_C57BL6J_5595433	Gm36274	NCBI_Gene:102640135	MGI:5595433	lncRNA gene	predicted gene, 36274
5	gene	111.58142	111.60493	positive	MGI_C57BL6J_3041189	C130026L21Rik	NCBI_Gene:330164,ENSEMBL:ENSMUSG00000052848	MGI:3041189	lncRNA gene	RIKEN cDNA C130026L21 gene
5	gene	111.59362	111.59428	positive	MGI_C57BL6J_5662626	Gm42489	ENSEMBL:ENSMUSG00000104833	MGI:5662626	lncRNA gene	predicted gene 42489
5	gene	111.65869	111.66349	negative	MGI_C57BL6J_5595545	Gm36386	NCBI_Gene:102640275	MGI:5595545	lncRNA gene	predicted gene, 36386
5	gene	111.66383	111.66674	positive	MGI_C57BL6J_5595593	Gm36434	NCBI_Gene:102640348	MGI:5595593	lncRNA gene	predicted gene, 36434
5	gene	111.70774	111.71154	positive	MGI_C57BL6J_5595640	Gm36481	NCBI_Gene:102640416	MGI:5595640	lncRNA gene	predicted gene, 36481
5	gene	111.73392	111.73457	positive	MGI_C57BL6J_5477391	Gm26897	ENSEMBL:ENSMUSG00000096949	MGI:5477391	protein coding gene	predicted gene, 26897
5	gene	111.73428	111.76173	negative	MGI_C57BL6J_2685527	E130006D01Rik	NCBI_Gene:269683,ENSEMBL:ENSMUSG00000085271	MGI:2685527	lncRNA gene	RIKEN cDNA E130006D01 gene
5	gene	111.74285	111.74818	positive	MGI_C57BL6J_3801872	Gm16019	ENSEMBL:ENSMUSG00000085919	MGI:3801872	lncRNA gene	predicted gene 16019
5	gene	111.79156	111.80730	positive	MGI_C57BL6J_5595694	Gm36535	NCBI_Gene:102640487,ENSEMBL:ENSMUSG00000105376	MGI:5595694	lncRNA gene	predicted gene, 36535
5	gene	111.89286	111.89883	positive	MGI_C57BL6J_5589094	Gm29935	NCBI_Gene:102631649	MGI:5589094	lncRNA gene	predicted gene, 29935
5	gene	111.89527	111.94745	negative	MGI_C57BL6J_5595953	Gm36794	NCBI_Gene:102640816	MGI:5595953	lncRNA gene	predicted gene, 36794
5	gene	111.91067	111.91956	positive	MGI_C57BL6J_5596039	Gm36880	NCBI_Gene:102640934	MGI:5596039	lncRNA gene	predicted gene, 36880
5	gene	111.93980	111.94424	negative	MGI_C57BL6J_5662625	Gm42488	ENSEMBL:ENSMUSG00000106060	MGI:5662625	lncRNA gene	predicted gene 42488
5	gene	111.94443	111.94753	positive	MGI_C57BL6J_5625041	Gm42156	NCBI_Gene:105246966	MGI:5625041	lncRNA gene	predicted gene, 42156
5	gene	112.10484	112.12091	negative	MGI_C57BL6J_5589191	Gm30032	NCBI_Gene:102631783	MGI:5589191	lncRNA gene	predicted gene, 30032
5	gene	112.15620	112.16525	positive	MGI_C57BL6J_1922890	1700016B01Rik	NCBI_Gene:75640,ENSEMBL:ENSMUSG00000104538	MGI:1922890	lncRNA gene	RIKEN cDNA 1700016B01 gene
5	gene	112.20676	112.21000	positive	MGI_C57BL6J_1922819	1700028D13Rik	NCBI_Gene:75569,ENSEMBL:ENSMUSG00000101683	MGI:1922819	lncRNA gene	RIKEN cDNA 1700028D13 gene
5	gene	112.21323	112.22939	negative	MGI_C57BL6J_2444886	Miat	NCBI_Gene:330166,ENSEMBL:ENSMUSG00000097767	MGI:2444886	lncRNA gene	myocardial infarction associated transcript (non-protein coding)
5	gene	112.21546	112.23372	positive	MGI_C57BL6J_5504068	Gm26953	ENSEMBL:ENSMUSG00000097986	MGI:5504068	lncRNA gene	predicted gene, 26953
5	gene	112.21551	112.21587	negative	MGI_C57BL6J_5531380	Gm27998	ENSEMBL:ENSMUSG00000098395	MGI:5531380	unclassified non-coding RNA gene	predicted gene, 27998
5	gene	112.21674	112.21681	negative	MGI_C57BL6J_5531264	Gm27882	ENSEMBL:ENSMUSG00000099235	MGI:5531264	unclassified non-coding RNA gene	predicted gene, 27882
5	gene	112.21732	112.21747	negative	MGI_C57BL6J_5531009	Gm27627	ENSEMBL:ENSMUSG00000098599	MGI:5531009	unclassified non-coding RNA gene	predicted gene, 27627
5	gene	112.22861	112.22874	negative	MGI_C57BL6J_5530739	Gm27357	ENSEMBL:ENSMUSG00000099010	MGI:5530739	unclassified non-coding RNA gene	predicted gene, 27357
5	gene	112.24649	112.26355	negative	MGI_C57BL6J_102716	Cryba4	NCBI_Gene:12959,ENSEMBL:ENSMUSG00000066975	MGI:102716	protein coding gene	crystallin, beta A4
5	gene	112.25448	112.26959	positive	MGI_C57BL6J_104992	Crybb1	NCBI_Gene:12960,ENSEMBL:ENSMUSG00000029343	MGI:104992	protein coding gene	crystallin, beta B1
5	gene	112.27072	112.27145	negative	MGI_C57BL6J_5826578	Gm46941	NCBI_Gene:108169115	MGI:5826578	lncRNA gene	predicted gene, 46941
5	gene	112.27668	112.31536	positive	MGI_C57BL6J_1309516	Tpst2	NCBI_Gene:22022,ENSEMBL:ENSMUSG00000029344	MGI:1309516	protein coding gene	protein-tyrosine sulfotransferase 2
5	gene	112.32636	112.33807	positive	MGI_C57BL6J_1930075	Tfip11	NCBI_Gene:54723,ENSEMBL:ENSMUSG00000029345	MGI:1930075	protein coding gene	tuftelin interacting protein 11
5	gene	112.33739	112.34311	negative	MGI_C57BL6J_1917368	Srrd	NCBI_Gene:70118,ENSEMBL:ENSMUSG00000029346	MGI:1917368	protein coding gene	SRR1 domain containing
5	gene	112.34304	112.37842	positive	MGI_C57BL6J_2177742	Hps4	NCBI_Gene:192232,ENSEMBL:ENSMUSG00000042328	MGI:2177742	protein coding gene	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
5	gene	112.35377	112.35603	negative	MGI_C57BL6J_3648511	Gm6583	NCBI_Gene:625424,ENSEMBL:ENSMUSG00000051503	MGI:3648511	protein coding gene	predicted gene 6583
5	gene	112.36721	112.36847	positive	MGI_C57BL6J_5663896	Gm43759	ENSEMBL:ENSMUSG00000105368	MGI:5663896	unclassified gene	predicted gene 43759
5	gene	112.37259	112.37295	negative	MGI_C57BL6J_5663895	Gm43758	ENSEMBL:ENSMUSG00000104885	MGI:5663895	unclassified gene	predicted gene 43758
5	gene	112.37437	112.37764	negative	MGI_C57BL6J_5313083	Gm20636	NCBI_Gene:105246968,ENSEMBL:ENSMUSG00000093637	MGI:5313083	lncRNA gene	predicted gene 20636
5	gene	112.37842	112.38391	negative	MGI_C57BL6J_5625043	Gm42158	NCBI_Gene:105246969	MGI:5625043	lncRNA gene	predicted gene, 42158
5	gene	112.38435	112.39538	negative	MGI_C57BL6J_1920148	Asphd2	NCBI_Gene:72898,ENSEMBL:ENSMUSG00000029348	MGI:1920148	protein coding gene	aspartate beta-hydroxylase domain containing 2
5	gene	112.41915	112.57805	negative	MGI_C57BL6J_1935121	Sez6l	NCBI_Gene:56747,ENSEMBL:ENSMUSG00000058153	MGI:1935121	protein coding gene	seizure related 6 homolog like
5	gene	112.44943	112.45174	positive	MGI_C57BL6J_3648937	Gm6588	NCBI_Gene:625464,ENSEMBL:ENSMUSG00000072722	MGI:3648937	protein coding gene	predicted gene 6588
5	gene	112.47685	112.47935	positive	MGI_C57BL6J_5625045	Gm42160	NCBI_Gene:105246971	MGI:5625045	lncRNA gene	predicted gene, 42160
5	gene	112.58264	112.58337	positive	MGI_C57BL6J_5504119	Gm27004	ENSEMBL:ENSMUSG00000098027	MGI:5504119	lncRNA gene	predicted gene, 27004
5	gene	112.58294	112.59000	negative	MGI_C57BL6J_1914575	1700034G24Rik	NCBI_Gene:67325,ENSEMBL:ENSMUSG00000097962	MGI:1914575	lncRNA gene	RIKEN cDNA 1700034G24 gene
5	gene	112.64033	112.64163	positive	MGI_C57BL6J_1918422	4933415J04Rik	ENSEMBL:ENSMUSG00000105735	MGI:1918422	unclassified gene	RIKEN cDNA 4933415J04 gene
5	gene	112.64383	112.68054	positive	MGI_C57BL6J_5589688	Gm30529	NCBI_Gene:102632462	MGI:5589688	lncRNA gene	predicted gene, 30529
5	gene	112.64937	112.65211	positive	MGI_C57BL6J_5663001	Gm42864	ENSEMBL:ENSMUSG00000105152	MGI:5663001	lncRNA gene	predicted gene 42864
5	gene	112.67538	112.68059	positive	MGI_C57BL6J_5663002	Gm42865	ENSEMBL:ENSMUSG00000104807	MGI:5663002	lncRNA gene	predicted gene 42865
5	gene	112.68888	112.89646	negative	MGI_C57BL6J_1921626	Myo18b	NCBI_Gene:74376,ENSEMBL:ENSMUSG00000072720	MGI:1921626	protein coding gene	myosin XVIIIb
5	gene	112.79329	112.80170	positive	MGI_C57BL6J_1914610	1700095B10Rik	NCBI_Gene:67360,ENSEMBL:ENSMUSG00000098230	MGI:1914610	lncRNA gene	RIKEN cDNA 1700095B10 gene
5	gene	112.91048	113.01865	negative	MGI_C57BL6J_87941	Grk3	NCBI_Gene:320129,ENSEMBL:ENSMUSG00000042249	MGI:87941	protein coding gene	G protein-coupled receptor kinase 3
5	gene	113.04414	113.04425	positive	MGI_C57BL6J_5452517	Gm22740	ENSEMBL:ENSMUSG00000065373	MGI:5452517	snRNA gene	predicted gene, 22740
5	gene	113.05826	113.07012	negative	MGI_C57BL6J_88519	Crybb2	NCBI_Gene:12961,ENSEMBL:ENSMUSG00000042240	MGI:88519	protein coding gene	crystallin, beta B2
5	pseudogene	113.06049	113.06099	positive	MGI_C57BL6J_5663384	Gm43247	NCBI_Gene:108169063,ENSEMBL:ENSMUSG00000105406	MGI:5663384	pseudogene	predicted gene 43247
5	gene	113.07584	113.08223	negative	MGI_C57BL6J_102717	Crybb3	NCBI_Gene:12962,ENSEMBL:ENSMUSG00000029352	MGI:102717	protein coding gene	crystallin, beta B3
5	gene	113.08632	113.22129	negative	MGI_C57BL6J_1920194	2900026A02Rik	NCBI_Gene:243219,ENSEMBL:ENSMUSG00000051339	MGI:1920194	protein coding gene	RIKEN cDNA 2900026A02 gene
5	gene	113.10052	113.10108	positive	MGI_C57BL6J_5663383	Gm43246	ENSEMBL:ENSMUSG00000106541	MGI:5663383	unclassified gene	predicted gene 43246
5	gene	113.11757	113.11946	negative	MGI_C57BL6J_3642056	F830115B05Rik	ENSEMBL:ENSMUSG00000104576	MGI:3642056	unclassified non-coding RNA gene	RIKEN cDNA F830115B05 gene
5	gene	113.13788	113.14112	positive	MGI_C57BL6J_1926036	4833439F03Rik	NCBI_Gene:105246973	MGI:1926036	lncRNA gene	RIKEN cDNA 4833439F03 gene
5	gene	113.14245	113.14283	positive	MGI_C57BL6J_1922593	4930557B06Rik	ENSEMBL:ENSMUSG00000106191	MGI:1922593	unclassified gene	RIKEN cDNA 4930557B06 gene
5	gene	113.14461	113.15437	positive	MGI_C57BL6J_5625046	Gm42161	NCBI_Gene:105246972,ENSEMBL:ENSMUSG00000106659	MGI:5625046	lncRNA gene	predicted gene, 42161
5	gene	113.16531	113.16623	negative	MGI_C57BL6J_5663231	Gm43094	ENSEMBL:ENSMUSG00000106206	MGI:5663231	unclassified gene	predicted gene 43094
5	gene	113.16531	113.16626	positive	MGI_C57BL6J_1922608	4930554B03Rik	NA	NA	unclassified gene	RIKEN cDNA 4930554B03 gene
5	gene	113.22691	113.24022	positive	MGI_C57BL6J_2685700	Tmem211	NCBI_Gene:333048,ENSEMBL:ENSMUSG00000066964	MGI:2685700	protein coding gene	transmembrane protein 211
5	gene	113.24322	113.31079	negative	MGI_C57BL6J_107320	Sgsm1	NCBI_Gene:52850,ENSEMBL:ENSMUSG00000042216	MGI:107320	protein coding gene	small G protein signaling modulator 1
5	gene	113.32045	113.32165	negative	MGI_C57BL6J_1921047	4930405N21Rik	ENSEMBL:ENSMUSG00000104705	MGI:1921047	unclassified gene	RIKEN cDNA 4930405N21 gene
5	gene	113.32419	113.32548	positive	MGI_C57BL6J_5663490	Gm43353	ENSEMBL:ENSMUSG00000105174	MGI:5663490	unclassified gene	predicted gene 43353
5	gene	113.32449	113.32455	negative	MGI_C57BL6J_5562765	Mir7229	miRBase:MI0023724,NCBI_Gene:102465709,ENSEMBL:ENSMUSG00000105778	MGI:5562765	miRNA gene	microRNA 7229
5	gene	113.33759	113.33764	negative	MGI_C57BL6J_5562766	Mir7230	miRBase:MI0023725,NCBI_Gene:102466821,ENSEMBL:ENSMUSG00000104840	MGI:5562766	miRNA gene	microRNA 7230
5	gene	113.34984	113.35712	positive	MGI_C57BL6J_1921478	1700016C19Rik	NCBI_Gene:74228	MGI:1921478	unclassified non-coding RNA gene	RIKEN cDNA 1700016C19 gene
5	gene	113.35729	113.35782	positive	MGI_C57BL6J_1891321	Aym1	NCBI_Gene:503692,ENSEMBL:ENSMUSG00000053873	MGI:1891321	protein coding gene	activator of yeast meiotic promoters 1
5	gene	113.36431	113.36573	positive	MGI_C57BL6J_1921067	4930404F17Rik	NA	NA	unclassified gene	RIKEN cDNA 4930404F17 gene
5	gene	113.46225	113.47618	positive	MGI_C57BL6J_5589971	Gm30812	NCBI_Gene:102632847	MGI:5589971	lncRNA gene	predicted gene, 30812
5	gene	113.48910	113.58973	positive	MGI_C57BL6J_2445030	Wscd2	NCBI_Gene:320916,ENSEMBL:ENSMUSG00000063430	MGI:2445030	protein coding gene	WSC domain containing 2
5	gene	113.60323	113.61100	positive	MGI_C57BL6J_5624887	Gm42002	NCBI_Gene:105246760	MGI:5624887	lncRNA gene	predicted gene, 42002
5	gene	113.61235	113.65047	negative	MGI_C57BL6J_109603	Cmklr1	NCBI_Gene:14747,ENSEMBL:ENSMUSG00000042190	MGI:109603	protein coding gene	chemokine-like receptor 1
5	gene	113.64403	113.64668	positive	MGI_C57BL6J_3783178	Gm15736	NCBI_Gene:102637521,ENSEMBL:ENSMUSG00000085713	MGI:3783178	lncRNA gene	predicted gene 15736
5	gene	113.69242	113.72477	negative	MGI_C57BL6J_1920726	1700069L16Rik	NCBI_Gene:381707,ENSEMBL:ENSMUSG00000042184	MGI:1920726	protein coding gene	RIKEN cDNA 1700069L16 gene
5	gene	113.69602	113.69871	negative	MGI_C57BL6J_5826556	Gm46919	NCBI_Gene:108169064	MGI:5826556	lncRNA gene	predicted gene, 46919
5	gene	113.73568	113.74061	positive	MGI_C57BL6J_1098550	Ficd	NCBI_Gene:231630,ENSEMBL:ENSMUSG00000053334	MGI:1098550	protein coding gene	FIC domain containing
5	gene	113.74244	113.77251	negative	MGI_C57BL6J_1858230	Sart3	NCBI_Gene:53890,ENSEMBL:ENSMUSG00000018974	MGI:1858230	protein coding gene	squamous cell carcinoma antigen recognized by T cells 3
5	pseudogene	113.76710	113.76741	positive	MGI_C57BL6J_3781688	Gm3511	NCBI_Gene:100041786,ENSEMBL:ENSMUSG00000105031	MGI:3781688	pseudogene	predicted gene 3511
5	gene	113.77275	113.77829	positive	MGI_C57BL6J_1913633	Iscu	NCBI_Gene:66383,ENSEMBL:ENSMUSG00000025825	MGI:1913633	protein coding gene	iron-sulfur cluster assembly enzyme
5	gene	113.79373	113.80052	negative	MGI_C57BL6J_2385228	Tmem119	NCBI_Gene:231633,ENSEMBL:ENSMUSG00000054675	MGI:2385228	protein coding gene	transmembrane protein 119
5	gene	113.80059	113.81498	positive	MGI_C57BL6J_5624889	Gm42004	NCBI_Gene:105246762	MGI:5624889	lncRNA gene	predicted gene, 42004
5	pseudogene	113.81712	113.81783	positive	MGI_C57BL6J_5012116	Gm19931	NCBI_Gene:100503861,ENSEMBL:ENSMUSG00000104972	MGI:5012116	pseudogene	predicted gene, 19931
5	gene	113.81780	113.83264	negative	MGI_C57BL6J_106689	Selplg	NCBI_Gene:20345,ENSEMBL:ENSMUSG00000048163	MGI:106689	protein coding gene	selectin, platelet (p-selectin) ligand
5	gene	113.84244	113.90876	negative	MGI_C57BL6J_1345964	Coro1c	NCBI_Gene:23790,ENSEMBL:ENSMUSG00000004530	MGI:1345964	protein coding gene	coronin, actin binding protein 1C
5	gene	113.84260	113.84312	positive	MGI_C57BL6J_4937949	Gm17122	ENSEMBL:ENSMUSG00000090458	MGI:4937949	lncRNA gene	predicted gene 17122
5	gene	113.86016	113.86344	positive	MGI_C57BL6J_5663472	Gm43335	ENSEMBL:ENSMUSG00000106623	MGI:5663472	unclassified gene	predicted gene 43335
5	gene	113.87513	113.87753	positive	MGI_C57BL6J_5624890	Gm42005	NCBI_Gene:105246763	MGI:5624890	lncRNA gene	predicted gene, 42005
5	gene	113.90040	113.90490	negative	MGI_C57BL6J_5663473	Gm43336	ENSEMBL:ENSMUSG00000105071	MGI:5663473	unclassified gene	predicted gene 43336
5	gene	113.92856	113.93013	negative	MGI_C57BL6J_5662934	Gm42797	ENSEMBL:ENSMUSG00000105664	MGI:5662934	lncRNA gene	predicted gene 42797
5	gene	113.92872	113.92880	negative	MGI_C57BL6J_5451833	Gm22056	ENSEMBL:ENSMUSG00000065320	MGI:5451833	snRNA gene	predicted gene, 22056
5	gene	113.93709	113.99389	negative	MGI_C57BL6J_2686240	Ssh1	NCBI_Gene:231637,ENSEMBL:ENSMUSG00000042121	MGI:2686240	protein coding gene	slingshot protein phosphatase 1
5	gene	113.99964	114.02568	positive	MGI_C57BL6J_94859	Dao	NCBI_Gene:13142,ENSEMBL:ENSMUSG00000042096	MGI:94859	protein coding gene	D-amino acid oxidase
5	gene	114.02691	114.09157	negative	MGI_C57BL6J_1915916	Svop	NCBI_Gene:68666,ENSEMBL:ENSMUSG00000042078	MGI:1915916	protein coding gene	SV2 related protein
5	gene	114.06524	114.08947	positive	MGI_C57BL6J_3802072	Gm16108	NCBI_Gene:102637926	MGI:3802072	lncRNA gene	predicted gene 16108
5	gene	114.06546	114.12472	positive	MGI_C57BL6J_2140991	Usp30	NCBI_Gene:100756,ENSEMBL:ENSMUSG00000029592	MGI:2140991	protein coding gene	ubiquitin specific peptidase 30
5	pseudogene	114.10893	114.11000	positive	MGI_C57BL6J_5010018	Gm17833	NCBI_Gene:100415948,ENSEMBL:ENSMUSG00000106484	MGI:5010018	pseudogene	predicted gene, 17833
5	gene	114.11583	114.11768	positive	MGI_C57BL6J_5663050	Gm42913	ENSEMBL:ENSMUSG00000105514	MGI:5663050	unclassified gene	predicted gene 42913
5	gene	114.12393	114.13054	negative	MGI_C57BL6J_2141032	Alkbh2	NCBI_Gene:231642,ENSEMBL:ENSMUSG00000044339	MGI:2141032	protein coding gene	alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase
5	gene	114.13036	114.13932	positive	MGI_C57BL6J_109352	Ung	NCBI_Gene:22256,ENSEMBL:ENSMUSG00000029591	MGI:109352	protein coding gene	uracil DNA glycosylase
5	gene	114.14632	114.25076	positive	MGI_C57BL6J_2140940	Acacb	NCBI_Gene:100705,ENSEMBL:ENSMUSG00000042010	MGI:2140940	protein coding gene	acetyl-Coenzyme A carboxylase beta
5	pseudogene	114.23718	114.23793	negative	MGI_C57BL6J_3649548	Gm13784	ENSEMBL:ENSMUSG00000084243	MGI:3649548	pseudogene	predicted gene 13784
5	gene	114.25416	114.27460	negative	MGI_C57BL6J_2151057	Foxn4	NCBI_Gene:116810,ENSEMBL:ENSMUSG00000042002	MGI:2151057	protein coding gene	forkhead box N4
5	gene	114.28890	114.36536	positive	MGI_C57BL6J_1914674	Myo1h	NCBI_Gene:231646,ENSEMBL:ENSMUSG00000066952	MGI:1914674	protein coding gene	myosin 1H
5	gene	114.36357	114.38051	negative	MGI_C57BL6J_2141207	Kctd10	NCBI_Gene:330171,ENSEMBL:ENSMUSG00000001098	MGI:2141207	protein coding gene	potassium channel tetramerisation domain containing 10
5	gene	114.38060	114.42117	positive	MGI_C57BL6J_1891295	Ube3b	NCBI_Gene:117146,ENSEMBL:ENSMUSG00000029577	MGI:1891295	protein coding gene	ubiquitin protein ligase E3B
5	gene	114.40447	114.40454	positive	MGI_C57BL6J_5531213	Mir7027	miRBase:MI0022876,NCBI_Gene:102465621,ENSEMBL:ENSMUSG00000098731	MGI:5531213	miRNA gene	microRNA 7027
5	gene	114.43103	114.44407	negative	MGI_C57BL6J_1924947	Mmab	NCBI_Gene:77697,ENSEMBL:ENSMUSG00000029575	MGI:1924947	protein coding gene	methylmalonic aciduria (cobalamin deficiency) cblB type homolog (human)
5	gene	114.44426	114.46059	positive	MGI_C57BL6J_107624	Mvk	NCBI_Gene:17855,ENSEMBL:ENSMUSG00000041939	MGI:107624	protein coding gene	mevalonate kinase
5	gene	114.47899	114.48022	negative	MGI_C57BL6J_5593881	Gm34722	NCBI_Gene:102638072	MGI:5593881	lncRNA gene	predicted gene, 34722
5	gene	114.55129	114.55925	positive	MGI_C57BL6J_3650747	Gm13790	NCBI_Gene:102638159,ENSEMBL:ENSMUSG00000086302	MGI:3650747	lncRNA gene	predicted gene 13790
5	gene	114.56802	114.61322	positive	MGI_C57BL6J_3605543	Fam222a	NCBI_Gene:433940,ENSEMBL:ENSMUSG00000041930	MGI:3605543	protein coding gene	family with sequence similarity 222, member A
5	gene	114.59114	114.60416	negative	MGI_C57BL6J_5594003	Gm34844	NCBI_Gene:102638235	MGI:5594003	lncRNA gene	predicted gene, 34844
5	gene	114.62215	114.65843	negative	MGI_C57BL6J_1926945	Trpv4	NCBI_Gene:63873,ENSEMBL:ENSMUSG00000014158	MGI:1926945	protein coding gene	transient receptor potential cation channel, subfamily V, member 4
5	gene	114.66940	114.69098	negative	MGI_C57BL6J_1929253	Gltp	NCBI_Gene:56356,ENSEMBL:ENSMUSG00000011884	MGI:1929253	protein coding gene	glycolipid transfer protein
5	gene	114.69698	114.70782	negative	MGI_C57BL6J_5594090	Gm34931	NCBI_Gene:102638343	MGI:5594090	lncRNA gene	predicted gene, 34931
5	gene	114.70776	114.72233	positive	MGI_C57BL6J_1925082	Tchp	NCBI_Gene:77832,ENSEMBL:ENSMUSG00000002486	MGI:1925082	protein coding gene	trichoplein, keratin filament binding
5	gene	114.71555	114.71612	negative	MGI_C57BL6J_5662926	Gm42789	ENSEMBL:ENSMUSG00000107340	MGI:5662926	lncRNA gene	predicted gene 42789
5	gene	114.71952	114.71958	positive	MGI_C57BL6J_5531056	Mir7028	miRBase:MI0022877,NCBI_Gene:102465622,ENSEMBL:ENSMUSG00000098656	MGI:5531056	miRNA gene	microRNA 7028
5	gene	114.72741	114.77552	negative	MGI_C57BL6J_1347053	Git2	NCBI_Gene:26431,ENSEMBL:ENSMUSG00000041890	MGI:1347053	protein coding gene	GIT ArfGAP 2
5	gene	114.77373	114.77498	negative	MGI_C57BL6J_1914892	4930515G01Rik	NCBI_Gene:67642,ENSEMBL:ENSMUSG00000092183	MGI:1914892	lncRNA gene	RIKEN cDNA 4930515G01 gene
5	gene	114.77468	114.80620	positive	MGI_C57BL6J_1915670	Ankrd13a	NCBI_Gene:68420,ENSEMBL:ENSMUSG00000041870	MGI:1915670	protein coding gene	ankyrin repeat domain 13a
5	gene	114.78059	114.78457	positive	MGI_C57BL6J_5011529	Gm19344	NA	NA	unclassified gene	predicted gene%2c 19344
5	gene	114.80820	114.82347	negative	MGI_C57BL6J_1913486	1500011B03Rik	NCBI_Gene:66236,ENSEMBL:ENSMUSG00000072694	MGI:1913486	protein coding gene	RIKEN cDNA 1500011B03 gene
5	gene	114.82194	114.82347	negative	MGI_C57BL6J_2447819	2610524H06Rik	NCBI_Gene:330173	MGI:2447819	protein coding gene	RIKEN cDNA 2610524H06 gene
5	pseudogene	114.82855	114.82926	negative	MGI_C57BL6J_3650308	Ywhaq-ps2	NCBI_Gene:664895,ENSEMBL:ENSMUSG00000082052	MGI:3650308	pseudogene	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, pseudogene 2
5	gene	114.83465	114.84659	negative	MGI_C57BL6J_3652003	Gm13821	NCBI_Gene:105246765,ENSEMBL:ENSMUSG00000107256	MGI:3652003	lncRNA gene	predicted gene 13821
5	gene	114.83669	114.84116	positive	MGI_C57BL6J_5826557	Gm46920	NCBI_Gene:108169065	MGI:5826557	lncRNA gene	predicted gene, 46920
5	gene	114.85195	114.85206	positive	MGI_C57BL6J_5531232	Mir6240	miRBase:MI0021587,NCBI_Gene:102466620,ENSEMBL:ENSMUSG00000098343	MGI:5531232	miRNA gene	microRNA 6240
5	gene	114.85364	114.88388	positive	MGI_C57BL6J_1914843	4930519G04Rik	NCBI_Gene:67593,ENSEMBL:ENSMUSG00000029564	MGI:1914843	protein coding gene	RIKEN cDNA 4930519G04 gene
5	gene	114.85502	114.86050	negative	MGI_C57BL6J_3641854	Gm9936	NCBI_Gene:791292,ENSEMBL:ENSMUSG00000107108	MGI:3641854	protein coding gene	predicted gene 9936
5	pseudogene	114.86768	114.86803	negative	MGI_C57BL6J_3651997	Gm13823	ENSEMBL:ENSMUSG00000080707	MGI:3651997	pseudogene	predicted gene 13823
5	gene	114.89693	114.91224	positive	MGI_C57BL6J_1344390	Oasl2	NCBI_Gene:23962,ENSEMBL:ENSMUSG00000029561	MGI:1344390	protein coding gene	2’-5’ oligoadenylate synthetase-like 2
5	gene	114.91732	114.92328	negative	MGI_C57BL6J_3650351	Gm13822	NCBI_Gene:105246766,ENSEMBL:ENSMUSG00000087477	MGI:3650351	lncRNA gene	predicted gene 13822
5	gene	114.92318	114.93792	positive	MGI_C57BL6J_2180849	Oasl1	NCBI_Gene:231655,ENSEMBL:ENSMUSG00000041827	MGI:2180849	protein coding gene	2’-5’ oligoadenylate synthetase-like 1
5	gene	114.94216	114.94978	positive	MGI_C57BL6J_1919607	2210016L21Rik	NCBI_Gene:72357,ENSEMBL:ENSMUSG00000029559	MGI:1919607	protein coding gene	RIKEN cDNA 2210016L21 gene
5	gene	114.94898	114.97109	negative	MGI_C57BL6J_98504	Hnf1a	NCBI_Gene:21405,ENSEMBL:ENSMUSG00000029556	MGI:98504	protein coding gene	HNF1 homeobox A
5	gene	114.96865	114.99804	positive	MGI_C57BL6J_3652225	Hnf1aos1	NCBI_Gene:102638537,ENSEMBL:ENSMUSG00000086054	MGI:3652225	antisense lncRNA gene	HNF1 homeobox A, opposite strand 1
5	gene	114.96882	114.97140	positive	MGI_C57BL6J_3652220	Hnf1aos2	ENSEMBL:ENSMUSG00000086140	MGI:3652220	antisense lncRNA gene	HNF1 homeobox A, opposite strand 2
5	gene	114.97546	114.97601	positive	MGI_C57BL6J_1916294	1810017P11Rik	ENSEMBL:ENSMUSG00000106838	MGI:1916294	unclassified gene	RIKEN cDNA 1810017P11 gene
5	gene	115.01114	115.09879	positive	MGI_C57BL6J_1891433	Sppl3	NCBI_Gene:74585,ENSEMBL:ENSMUSG00000029550	MGI:1891433	protein coding gene	signal peptide peptidase 3
5	gene	115.03977	115.04108	positive	MGI_C57BL6J_3026961	C730045M19Rik	ENSEMBL:ENSMUSG00000107054	MGI:3026961	unclassified gene	RIKEN cDNA C730045M19 gene
5	pseudogene	115.05347	115.05384	negative	MGI_C57BL6J_3651518	Gm13827	ENSEMBL:ENSMUSG00000086167	MGI:3651518	pseudogene	predicted gene 13827
5	gene	115.09769	115.09829	negative	MGI_C57BL6J_3704254	Gm10401	ENSEMBL:ENSMUSG00000072693	MGI:3704254	lncRNA gene	predicted gene 10401
5	gene	115.10292	115.11027	negative	MGI_C57BL6J_3651519	Rpl37rt	NCBI_Gene:100502825,ENSEMBL:ENSMUSG00000072692	MGI:3651519	protein coding gene	ribosomal protein L37, retrotransposed
5	gene	115.11030	115.11935	negative	MGI_C57BL6J_87868	Acads	NCBI_Gene:11409,ENSEMBL:ENSMUSG00000029545	MGI:87868	protein coding gene	acyl-Coenzyme A dehydrogenase, short chain
5	gene	115.12255	115.13497	negative	MGI_C57BL6J_2147162	Unc119b	NCBI_Gene:106840,ENSEMBL:ENSMUSG00000046562	MGI:2147162	protein coding gene	unc-119 lipid binding chaperone B
5	gene	115.14298	115.15818	negative	MGI_C57BL6J_1924015	Mlec	NCBI_Gene:109154,ENSEMBL:ENSMUSG00000048578	MGI:1924015	protein coding gene	malectin
5	gene	115.15950	115.16545	positive	MGI_C57BL6J_5594624	Gm35465	NCBI_Gene:102639062	MGI:5594624	lncRNA gene	predicted gene, 35465
5	gene	115.16869	115.19438	negative	MGI_C57BL6J_1352750	Cabp1	NCBI_Gene:29867,ENSEMBL:ENSMUSG00000029544	MGI:1352750	protein coding gene	calcium binding protein 1
5	gene	115.19438	115.20526	positive	MGI_C57BL6J_5594674	Gm35515	NCBI_Gene:102639129	MGI:5594674	lncRNA gene	predicted gene, 35515
5	pseudogene	115.19834	115.19871	positive	MGI_C57BL6J_3651756	Gm13828	ENSEMBL:ENSMUSG00000083182	MGI:3651756	pseudogene	predicted gene 13828
5	gene	115.23559	115.24535	positive	MGI_C57BL6J_2151221	Pop5	NCBI_Gene:117109,ENSEMBL:ENSMUSG00000060152	MGI:2151221	protein coding gene	processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
5	gene	115.24141	115.27290	negative	MGI_C57BL6J_1859162	Rnf10	NCBI_Gene:50849,ENSEMBL:ENSMUSG00000041740	MGI:1859162	protein coding gene	ring finger protein 10
5	pseudogene	115.26309	115.26339	positive	MGI_C57BL6J_3651085	Gm13831	ENSEMBL:ENSMUSG00000083875	MGI:3651085	pseudogene	predicted gene 13831
5	gene	115.27967	115.29697	positive	MGI_C57BL6J_1098643	Coq5	NCBI_Gene:52064,ENSEMBL:ENSMUSG00000041733	MGI:1098643	protein coding gene	coenzyme Q5 methyltransferase
5	pseudogene	115.29176	115.29190	negative	MGI_C57BL6J_3651367	Gm13829	ENSEMBL:ENSMUSG00000082610	MGI:3651367	pseudogene	predicted gene 13829
5	gene	115.29711	115.30100	negative	MGI_C57BL6J_1861457	Dynll1	NCBI_Gene:56455,ENSEMBL:ENSMUSG00000009013	MGI:1861457	protein coding gene	dynein light chain LC8-type 1
5	gene	115.30112	115.32008	positive	MGI_C57BL6J_3651141	Gm13830	NCBI_Gene:102639268,ENSEMBL:ENSMUSG00000086368	MGI:3651141	lncRNA gene	predicted gene 13830
5	gene	115.30114	115.30229	positive	MGI_C57BL6J_5624891	Gm42006	NA	NA	lncRNA gene	predicted gene%2c 42006
5	gene	115.32716	115.33308	positive	MGI_C57BL6J_104896	Srsf9	NCBI_Gene:108014,ENSEMBL:ENSMUSG00000029538	MGI:104896	protein coding gene	serine/arginine-rich splicing factor 9
5	gene	115.33324	115.34118	negative	MGI_C57BL6J_1923776	Gatc	NCBI_Gene:384281,ENSEMBL:ENSMUSG00000029536	MGI:1923776	protein coding gene	glutamyl-tRNA(Gln) amidotransferase, subunit C
5	gene	115.34122	115.34357	positive	MGI_C57BL6J_1916326	Triap1	NCBI_Gene:69076,ENSEMBL:ENSMUSG00000029535	MGI:1916326	protein coding gene	TP53 regulated inhibitor of apoptosis 1
5	gene	115.34564	115.34898	negative	MGI_C57BL6J_103099	Cox6a1	NCBI_Gene:12861,ENSEMBL:ENSMUSG00000041697	MGI:103099	protein coding gene	cytochrome c oxidase subunit 6A1
5	gene	115.34913	115.35316	positive	MGI_C57BL6J_5663040	Gm42903	ENSEMBL:ENSMUSG00000107288	MGI:5663040	lncRNA gene	predicted gene 42903
5	gene	115.35270	115.35316	positive	MGI_C57BL6J_1925175	A430102K17Rik	NA	NA	unclassified gene	RIKEN cDNA A430102K17 gene
5	gene	115.35284	115.36375	negative	MGI_C57BL6J_1921042	4930401G09Rik	NCBI_Gene:73792,ENSEMBL:ENSMUSG00000086352	MGI:1921042	lncRNA gene	RIKEN cDNA 4930401G09 gene
5	gene	115.35908	115.42286	positive	MGI_C57BL6J_3650708	Gm13832	ENSEMBL:ENSMUSG00000087292	MGI:3650708	lncRNA gene	predicted gene 13832
5	gene	115.35908	115.45570	positive	MGI_C57BL6J_107376	Msi1	NCBI_Gene:17690,ENSEMBL:ENSMUSG00000054256	MGI:107376	protein coding gene	musashi RNA-binding protein 1
5	gene	115.35912	115.35927	positive	MGI_C57BL6J_3629774	Gt(pU21)129Imeg	NA	NA	unclassified gene	gene trap 129%2c Institute of Molecular Embryology and Genetics
5	gene	115.42059	115.42955	negative	MGI_C57BL6J_3528178	A930005G22Rik	NCBI_Gene:102639568,ENSEMBL:ENSMUSG00000106887	MGI:3528178	lncRNA gene	RIKEN cDNA A930005G22 gene
5	gene	115.42722	115.42947	negative	MGI_C57BL6J_5663368	Gm43231	ENSEMBL:ENSMUSG00000107240	MGI:5663368	unclassified gene	predicted gene 43231
5	gene	115.43607	115.43664	negative	MGI_C57BL6J_1925404	4930430O22Rik	ENSEMBL:ENSMUSG00000107353	MGI:1925404	lncRNA gene	RIKEN cDNA 4930430O22 gene
5	gene	115.46624	115.47472	positive	MGI_C57BL6J_101842	Pla2g1b	NCBI_Gene:18778,ENSEMBL:ENSMUSG00000029522	MGI:101842	protein coding gene	phospholipase A2, group IB, pancreas
5	gene	115.47801	115.49016	negative	MGI_C57BL6J_1922637	Sirt4	NCBI_Gene:75387,ENSEMBL:ENSMUSG00000029524	MGI:1922637	protein coding gene	sirtuin 4
5	gene	115.48447	115.48669	positive	MGI_C57BL6J_5624892	Gm42007	NCBI_Gene:105246768	MGI:5624892	lncRNA gene	predicted gene, 42007
5	gene	115.48946	115.48960	positive	MGI_C57BL6J_5454042	Gm24265	ENSEMBL:ENSMUSG00000096243	MGI:5454042	snRNA gene	predicted gene, 24265
5	gene	115.49025	115.49039	positive	MGI_C57BL6J_5454184	Gm24407	ENSEMBL:ENSMUSG00000094377	MGI:5454184	snRNA gene	predicted gene, 24407
5	pseudogene	115.49176	115.49528	negative	MGI_C57BL6J_3650922	Gm13836	NCBI_Gene:102639758,ENSEMBL:ENSMUSG00000081282	MGI:3650922	pseudogene	predicted gene 13836
5	gene	115.50668	115.55599	positive	MGI_C57BL6J_108295	Pxn	NCBI_Gene:19303,ENSEMBL:ENSMUSG00000029528	MGI:108295	protein coding gene	paxillin
5	gene	115.51154	115.51600	positive	MGI_C57BL6J_3649479	Gm13840	NCBI_Gene:102639837,ENSEMBL:ENSMUSG00000086849	MGI:3649479	lncRNA gene	predicted gene 13840
5	gene	115.55947	115.56373	positive	MGI_C57BL6J_1927636	Rplp0	NCBI_Gene:11837,ENSEMBL:ENSMUSG00000067274	MGI:1927636	protein coding gene	ribosomal protein, large, P0
5	gene	115.56522	115.62265	positive	MGI_C57BL6J_2444248	Gcn1	NCBI_Gene:231659,ENSEMBL:ENSMUSG00000041638	MGI:2444248	protein coding gene	GCN1 activator of EIF2AK4
5	gene	115.58095	115.58101	positive	MGI_C57BL6J_5530675	Mir7029	miRBase:MI0022878,NCBI_Gene:102466790,ENSEMBL:ENSMUSG00000099047	MGI:5530675	miRNA gene	microRNA 7029
5	gene	115.63105	115.63182	negative	MGI_C57BL6J_1913373	1110006O24Rik	NCBI_Gene:66123,ENSEMBL:ENSMUSG00000107121	MGI:1913373	lncRNA gene	RIKEN cDNA 1110006O24 gene
5	gene	115.63190	115.64774	positive	MGI_C57BL6J_1924657	Rab35	NCBI_Gene:77407,ENSEMBL:ENSMUSG00000029518	MGI:1924657	protein coding gene	RAB35, member RAS oncogene family
5	gene	115.64557	115.64563	positive	MGI_C57BL6J_5530649	Mir7030	miRBase:MI0022879,NCBI_Gene:102465623,ENSEMBL:ENSMUSG00000099254	MGI:5530649	miRNA gene	microRNA 7030
5	gene	115.64817	115.73166	negative	MGI_C57BL6J_1922915	Bicdl1	NCBI_Gene:75665,ENSEMBL:ENSMUSG00000041609	MGI:1922915	protein coding gene	BICD family like cargo adaptor 1
5	pseudogene	115.80154	115.80221	negative	MGI_C57BL6J_3650890	Gm13841	NCBI_Gene:665032,ENSEMBL:ENSMUSG00000083833	MGI:3650890	pseudogene	predicted gene 13841
5	gene	115.84522	116.00895	positive	MGI_C57BL6J_105313	Cit	NCBI_Gene:12704,ENSEMBL:ENSMUSG00000029516	MGI:105313	protein coding gene	citron
5	gene	115.87014	115.87243	positive	MGI_C57BL6J_5662610	Gm42473	ENSEMBL:ENSMUSG00000106869	MGI:5662610	unclassified gene	predicted gene 42473
5	gene	115.90153	115.90732	negative	MGI_C57BL6J_5624893	Gm42008	NCBI_Gene:105246769	MGI:5624893	lncRNA gene	predicted gene, 42008
5	gene	115.90243	115.90429	positive	MGI_C57BL6J_5662608	Gm42471	ENSEMBL:ENSMUSG00000107263	MGI:5662608	unclassified gene	predicted gene 42471
5	gene	115.91863	115.92364	negative	MGI_C57BL6J_5595344	Gm36185	NCBI_Gene:102640009	MGI:5595344	lncRNA gene	predicted gene, 36185
5	gene	116.00932	116.01610	positive	MGI_C57BL6J_3705279	Gm14508	ENSEMBL:ENSMUSG00000085376	MGI:3705279	lncRNA gene	predicted gene 14508
5	gene	116.01359	116.02451	negative	MGI_C57BL6J_1336167	Prkab1	NCBI_Gene:19079,ENSEMBL:ENSMUSG00000029513	MGI:1336167	protein coding gene	protein kinase, AMP-activated, beta 1 non-catalytic subunit
5	gene	116.02641	116.02923	negative	MGI_C57BL6J_3650892	Gm13842	ENSEMBL:ENSMUSG00000084992	MGI:3650892	lncRNA gene	predicted gene 13842
5	pseudogene	116.03215	116.03231	negative	MGI_C57BL6J_4937054	Gm17420	ENSEMBL:ENSMUSG00000090728	MGI:4937054	pseudogene	predicted gene, 17420
5	gene	116.03875	116.08325	negative	MGI_C57BL6J_3651514	Tmem233	NCBI_Gene:545798,ENSEMBL:ENSMUSG00000079278	MGI:3651514	protein coding gene	transmembrane protein 233
5	gene	116.12333	116.12911	positive	MGI_C57BL6J_2444781	C330018A13Rik	NCBI_Gene:320805,ENSEMBL:ENSMUSG00000086655	MGI:2444781	lncRNA gene	RIKEN cDNA C330018A13 gene
5	gene	116.12464	116.28900	negative	MGI_C57BL6J_2141043	Ccdc60	NCBI_Gene:269693,ENSEMBL:ENSMUSG00000043913	MGI:2141043	protein coding gene	coiled-coil domain containing 60
5	gene	116.19271	116.20670	positive	MGI_C57BL6J_5595711	Gm36552	NCBI_Gene:102640511	MGI:5595711	lncRNA gene	predicted gene, 36552
5	gene	116.23207	116.23807	positive	MGI_C57BL6J_5595661	Gm36502	NCBI_Gene:102640442	MGI:5595661	lncRNA gene	predicted gene, 36502
5	gene	116.24371	116.25495	positive	MGI_C57BL6J_3705240	Gm14507	ENSEMBL:ENSMUSG00000086122	MGI:3705240	lncRNA gene	predicted gene 14507
5	gene	116.25766	116.25864	positive	MGI_C57BL6J_3650972	Gm13837	ENSEMBL:ENSMUSG00000086055	MGI:3650972	lncRNA gene	predicted gene 13837
5	gene	116.30130	116.30351	positive	MGI_C57BL6J_3650513	Gm13839	ENSEMBL:ENSMUSG00000087124	MGI:3650513	lncRNA gene	predicted gene 13839
5	gene	116.30568	116.30936	negative	MGI_C57BL6J_3649377	Gm13838	ENSEMBL:ENSMUSG00000084921	MGI:3649377	lncRNA gene	predicted gene 13838
5	gene	116.31236	116.31828	positive	MGI_C57BL6J_1925096	B230112J18Rik	NCBI_Gene:77846,ENSEMBL:ENSMUSG00000086715	MGI:1925096	lncRNA gene	RIKEN cDNA B230112J18 gene
5	gene	116.38017	116.38164	negative	MGI_C57BL6J_1914014	4933424N20Rik	ENSEMBL:ENSMUSG00000106766	MGI:1914014	unclassified gene	RIKEN cDNA 4933424N20 gene
5	gene	116.39068	116.39280	negative	MGI_C57BL6J_1922553	4930562A09Rik	ENSEMBL:ENSMUSG00000086945	MGI:1922553	lncRNA gene	RIKEN cDNA 4930562A09 gene
5	gene	116.40849	116.42286	negative	MGI_C57BL6J_2135756	Hspb8	NCBI_Gene:80888,ENSEMBL:ENSMUSG00000041548	MGI:2135756	protein coding gene	heat shock protein 8
5	gene	116.41242	116.41876	positive	MGI_C57BL6J_5596000	Gm36841	NCBI_Gene:102640883	MGI:5596000	lncRNA gene	predicted gene, 36841
5	gene	116.42306	116.42600	positive	MGI_C57BL6J_5624894	Gm42009	NCBI_Gene:105246770	MGI:5624894	lncRNA gene	predicted gene, 42009
5	gene	116.43872	116.46549	positive	MGI_C57BL6J_1924048	Srrm4os	NCBI_Gene:76798,ENSEMBL:ENSMUSG00000086219	MGI:1924048	antisense lncRNA gene	serine/arginine repetitive matrix 4, opposite strand
5	gene	116.43927	116.59256	negative	MGI_C57BL6J_1916205	Srrm4	NCBI_Gene:68955,ENSEMBL:ENSMUSG00000063919	MGI:1916205	protein coding gene	serine/arginine repetitive matrix 4
5	gene	116.45610	116.45748	negative	MGI_C57BL6J_5662990	Gm42853	ENSEMBL:ENSMUSG00000107021	MGI:5662990	unclassified gene	predicted gene 42853
5	gene	116.50137	116.50272	negative	MGI_C57BL6J_1918558	4933430H06Rik	ENSEMBL:ENSMUSG00000107172	MGI:1918558	unclassified gene	RIKEN cDNA 4933430H06 gene
5	gene	116.57253	116.57349	negative	MGI_C57BL6J_5662991	Gm42854	ENSEMBL:ENSMUSG00000106914	MGI:5662991	lncRNA gene	predicted gene 42854
5	pseudogene	116.63248	116.63361	negative	MGI_C57BL6J_3648223	Gstm2-ps1	NCBI_Gene:433943,ENSEMBL:ENSMUSG00000107369	MGI:3648223	pseudogene	glutathione S-transferase mu 2 (muscle), pseudogene 1
5	gene	116.64274	116.83055	negative	MGI_C57BL6J_5663259	Gm43122	ENSEMBL:ENSMUSG00000106909	MGI:5663259	lncRNA gene	predicted gene 43122
5	gene	116.80270	116.80429	positive	MGI_C57BL6J_5589002	Gm29843	NCBI_Gene:102631528	MGI:5589002	lncRNA gene	predicted gene, 29843
5	gene	116.80872	116.81412	positive	MGI_C57BL6J_5589085	Gm29926	NCBI_Gene:102631634,ENSEMBL:ENSMUSG00000107237	MGI:5589085	lncRNA gene	predicted gene, 29926
5	gene	116.82145	116.82189	positive	MGI_C57BL6J_1925305	4930569F06Rik	ENSEMBL:ENSMUSG00000041512	MGI:1925305	unclassified non-coding RNA gene	RIKEN cDNA 4930569F06 gene
5	gene	116.88030	116.88464	positive	MGI_C57BL6J_5624895	Gm42010	NCBI_Gene:105246771	MGI:5624895	lncRNA gene	predicted gene, 42010
5	gene	116.91877	116.93527	negative	MGI_C57BL6J_5589131	Gm29972	NCBI_Gene:102631702	MGI:5589131	lncRNA gene	predicted gene, 29972
5	gene	116.99813	117.01807	negative	MGI_C57BL6J_5589187	Gm30028	NCBI_Gene:102631777	MGI:5589187	lncRNA gene	predicted gene, 30028
5	pseudogene	117.04369	117.05959	positive	MGI_C57BL6J_3648572	Gm7478	NCBI_Gene:665073,ENSEMBL:ENSMUSG00000107327	MGI:3648572	pseudogene	predicted gene 7478
5	gene	117.07595	117.08752	positive	MGI_C57BL6J_5624896	Gm42011	NCBI_Gene:105246772	MGI:5624896	lncRNA gene	predicted gene, 42011
5	gene	117.09168	117.11611	negative	MGI_C57BL6J_1919204	Suds3	NCBI_Gene:71954,ENSEMBL:ENSMUSG00000066900	MGI:1919204	protein coding gene	suppressor of defective silencing 3 homolog (S. cerevisiae)
5	gene	117.11522	117.11872	positive	MGI_C57BL6J_1925671	9530046B11Rik	ENSEMBL:ENSMUSG00000086047	MGI:1925671	lncRNA gene	RIKEN cDNA 9530046B11 gene
5	gene	117.12011	117.27522	positive	MGI_C57BL6J_3041177	Taok3	NCBI_Gene:330177,ENSEMBL:ENSMUSG00000061288	MGI:3041177	protein coding gene	TAO kinase 3
5	gene	117.13032	117.13325	positive	MGI_C57BL6J_5663774	Gm43637	ENSEMBL:ENSMUSG00000107225	MGI:5663774	unclassified gene	predicted gene 43637
5	gene	117.19656	117.19667	positive	MGI_C57BL6J_4422039	n-R5s174	ENSEMBL:ENSMUSG00000084587	MGI:4422039	rRNA gene	nuclear encoded rRNA 5S 174
5	gene	117.28265	117.28763	negative	MGI_C57BL6J_1344408	Pebp1	NCBI_Gene:23980,ENSEMBL:ENSMUSG00000032959	MGI:1344408	protein coding gene	phosphatidylethanolamine binding protein 1
5	pseudogene	117.29403	117.29441	negative	MGI_C57BL6J_3781959	Gm3786	NCBI_Gene:100042313,ENSEMBL:ENSMUSG00000106829	MGI:3781959	pseudogene	predicted gene 3786
5	gene	117.29989	117.30248	positive	MGI_C57BL6J_5662683	Gm42546	ENSEMBL:ENSMUSG00000106714	MGI:5662683	unclassified gene	predicted gene 42546
5	gene	117.31252	117.31565	negative	MGI_C57BL6J_3039587	BC051077	ENSEMBL:ENSMUSG00000097163	MGI:3039587	lncRNA gene	cDNA sequence BC051077
5	gene	117.31850	117.31924	negative	MGI_C57BL6J_3704255	Gm10399	ENSEMBL:ENSMUSG00000072688	MGI:3704255	lncRNA gene	predicted gene 10399
5	gene	117.31850	117.35501	positive	MGI_C57BL6J_2448533	Vsig10	NCBI_Gene:231668,ENSEMBL:ENSMUSG00000066894	MGI:2448533	protein coding gene	V-set and immunoglobulin domain containing 10
5	pseudogene	117.34865	117.34937	negative	MGI_C57BL6J_3783170	Gm15727	NCBI_Gene:108169066,ENSEMBL:ENSMUSG00000081274	MGI:3783170	pseudogene	predicted gene 15727
5	gene	117.35549	117.35716	negative	MGI_C57BL6J_5624897	Gm42012	NCBI_Gene:105246773	MGI:5624897	lncRNA gene	predicted gene, 42012
5	gene	117.35730	117.37860	positive	MGI_C57BL6J_2144041	Wsb2	NCBI_Gene:59043,ENSEMBL:ENSMUSG00000029364	MGI:2144041	protein coding gene	WD repeat and SOCS box-containing 2
5	gene	117.37810	117.38905	negative	MGI_C57BL6J_1919401	Rfc5	NCBI_Gene:72151,ENSEMBL:ENSMUSG00000029363	MGI:1919401	protein coding gene	replication factor C (activator 1) 5
5	gene	117.38898	117.39350	positive	MGI_C57BL6J_3783171	Gm15728	NCBI_Gene:102632031,ENSEMBL:ENSMUSG00000086075	MGI:3783171	lncRNA gene	predicted gene 15728
5	gene	117.41322	117.77500	positive	MGI_C57BL6J_3610315	Ksr2	NCBI_Gene:333050,ENSEMBL:ENSMUSG00000061578	MGI:3610315	protein coding gene	kinase suppressor of ras 2
5	gene	117.48251	117.48626	negative	MGI_C57BL6J_5624898	Gm42013	NCBI_Gene:105246774	MGI:5624898	lncRNA gene	predicted gene, 42013
5	gene	117.52070	117.52166	positive	MGI_C57BL6J_5662687	Gm42550	ENSEMBL:ENSMUSG00000107199	MGI:5662687	unclassified gene	predicted gene 42550
5	gene	117.78099	117.95884	positive	MGI_C57BL6J_97360	Nos1	NCBI_Gene:18125,ENSEMBL:ENSMUSG00000029361	MGI:97360	protein coding gene	nitric oxide synthase 1, neuronal
5	gene	117.85720	117.87933	negative	MGI_C57BL6J_5589519	Gm30360	NCBI_Gene:102632225	MGI:5589519	lncRNA gene	predicted gene, 30360
5	gene	117.87281	117.87292	positive	MGI_C57BL6J_5610256	Gm37028	ENSEMBL:ENSMUSG00000104071	MGI:5610256	unclassified gene	predicted gene, 37028
5	gene	117.93573	117.93967	negative	MGI_C57BL6J_5504110	Gm26995	NCBI_Gene:102632154,ENSEMBL:ENSMUSG00000098072	MGI:5504110	lncRNA gene	predicted gene, 26995
5	gene	117.97645	117.97656	negative	MGI_C57BL6J_5455120	Gm25343	ENSEMBL:ENSMUSG00000088085	MGI:5455120	snRNA gene	predicted gene, 25343
5	gene	117.97655	118.01020	positive	MGI_C57BL6J_1924223	Fbxo21	NCBI_Gene:231670,ENSEMBL:ENSMUSG00000032898	MGI:1924223	protein coding gene	F-box protein 21
5	gene	117.99625	118.00013	positive	MGI_C57BL6J_5011833	Gm19648	NA	NA	unclassified gene	predicted gene%2c 19648
5	gene	118.02645	118.02737	negative	MGI_C57BL6J_5662682	Gm42545	ENSEMBL:ENSMUSG00000107058	MGI:5662682	unclassified gene	predicted gene 42545
5	gene	118.02774	118.06188	positive	MGI_C57BL6J_1930803	Tesc	NCBI_Gene:57816,ENSEMBL:ENSMUSG00000029359	MGI:1930803	protein coding gene	tescalcin
5	gene	118.06497	118.15546	negative	MGI_C57BL6J_1923041	Fbxw8	NCBI_Gene:231672,ENSEMBL:ENSMUSG00000032867	MGI:1923041	protein coding gene	F-box and WD-40 domain protein 8
5	gene	118.06536	118.06971	positive	MGI_C57BL6J_3704256	Gm9754	ENSEMBL:ENSMUSG00000029360	MGI:3704256	lncRNA gene	predicted gene 9754
5	gene	118.07117	118.07436	positive	MGI_C57BL6J_5589625	Gm30466	NCBI_Gene:102632377	MGI:5589625	lncRNA gene	predicted gene, 30466
5	gene	118.14879	118.14889	negative	MGI_C57BL6J_5456188	Gm26411	ENSEMBL:ENSMUSG00000088293	MGI:5456188	snRNA gene	predicted gene, 26411
5	gene	118.16114	118.16502	positive	MGI_C57BL6J_5589681	Gm30522	NCBI_Gene:102632455	MGI:5589681	lncRNA gene	predicted gene, 30522
5	gene	118.16465	118.18948	positive	MGI_C57BL6J_1201608	Hrk	NCBI_Gene:12123,ENSEMBL:ENSMUSG00000046607	MGI:1201608	protein coding gene	harakiri, BCL2 interacting protein (contains only BH3 domain)
5	gene	118.19073	118.24512	negative	MGI_C57BL6J_2442859	Rnft2	NCBI_Gene:269695,ENSEMBL:ENSMUSG00000032850	MGI:2442859	protein coding gene	ring finger protein, transmembrane 2
5	gene	118.21105	118.21134	negative	MGI_C57BL6J_5453827	Gm24050	ENSEMBL:ENSMUSG00000089248	MGI:5453827	unclassified non-coding RNA gene	predicted gene, 24050
5	gene	118.24523	118.26609	positive	MGI_C57BL6J_1924042	2410131K14Rik	NCBI_Gene:76792,ENSEMBL:ENSMUSG00000032840	MGI:1924042	protein coding gene	RIKEN cDNA 2410131K14 gene
5	gene	118.26645	118.26658	positive	MGI_C57BL6J_5454853	Gm25076	ENSEMBL:ENSMUSG00000095477	MGI:5454853	snoRNA gene	predicted gene, 25076
5	gene	118.35991	118.36041	positive	MGI_C57BL6J_5826579	Gm46942	NCBI_Gene:108169116	MGI:5826579	lncRNA gene	predicted gene, 46942
5	gene	118.37315	118.38092	negative	MGI_C57BL6J_5589763	Gm30604	NCBI_Gene:102632563	MGI:5589763	lncRNA gene	predicted gene, 30604
5	gene	118.39681	118.39733	negative	MGI_C57BL6J_5579269	Gm28563	ENSEMBL:ENSMUSG00000106812	MGI:5579269	lncRNA gene	predicted gene 28563
5	gene	118.40279	118.41358	negative	MGI_C57BL6J_5589816	Gm30657	NCBI_Gene:102632631	MGI:5589816	lncRNA gene	predicted gene, 30657
5	gene	118.41873	118.41882	negative	MGI_C57BL6J_5456232	Gm26455	ENSEMBL:ENSMUSG00000093041	MGI:5456232	miRNA gene	predicted gene, 26455
5	gene	118.46205	118.46308	positive	MGI_C57BL6J_5589905	Gm30746	NCBI_Gene:102632757	MGI:5589905	lncRNA gene	predicted gene, 30746
5	pseudogene	118.48697	118.50350	positive	MGI_C57BL6J_3783197	Gm15754	NCBI_Gene:665162,ENSEMBL:ENSMUSG00000082365	MGI:3783197	pseudogene	predicted gene 15754
5	gene	118.49126	118.49263	negative	MGI_C57BL6J_5826558	Gm46921	NCBI_Gene:108169067	MGI:5826558	lncRNA gene	predicted gene, 46921
5	gene	118.56068	118.76544	positive	MGI_C57BL6J_2670178	Med13l	NCBI_Gene:76199,ENSEMBL:ENSMUSG00000018076	MGI:2670178	protein coding gene	mediator complex subunit 13-like
5	gene	118.56176	118.56310	negative	MGI_C57BL6J_5663922	Gm43785	ENSEMBL:ENSMUSG00000106912	MGI:5663922	unclassified gene	predicted gene 43785
5	gene	118.60272	118.60513	positive	MGI_C57BL6J_5663925	Gm43788	ENSEMBL:ENSMUSG00000107286	MGI:5663925	unclassified gene	predicted gene 43788
5	gene	118.61829	118.61931	positive	MGI_C57BL6J_5663412	Gm43275	ENSEMBL:ENSMUSG00000106798	MGI:5663412	unclassified gene	predicted gene 43275
5	gene	118.64437	118.64937	positive	MGI_C57BL6J_5663411	Gm43274	ENSEMBL:ENSMUSG00000107116	MGI:5663411	unclassified gene	predicted gene 43274
5	gene	118.68762	118.68924	positive	MGI_C57BL6J_5663189	Gm43052	ENSEMBL:ENSMUSG00000107115	MGI:5663189	unclassified gene	predicted gene 43052
5	gene	118.70740	118.71008	positive	MGI_C57BL6J_5663188	Gm43051	ENSEMBL:ENSMUSG00000107364	MGI:5663188	unclassified gene	predicted gene 43051
5	gene	118.82437	118.84331	negative	MGI_C57BL6J_5624900	Gm42015	NCBI_Gene:105246776	MGI:5624900	lncRNA gene	predicted gene, 42015
5	gene	118.87581	118.87747	negative	MGI_C57BL6J_5663919	Gm43782	ENSEMBL:ENSMUSG00000106708	MGI:5663919	lncRNA gene	predicted gene 43782
5	gene	118.92812	118.93596	positive	MGI_C57BL6J_5663479	Gm43342	ENSEMBL:ENSMUSG00000106745	MGI:5663479	lncRNA gene	predicted gene 43342
5	gene	118.95234	118.96126	positive	MGI_C57BL6J_1921877	4930413E15Rik	NCBI_Gene:74627,ENSEMBL:ENSMUSG00000107144	MGI:1921877	lncRNA gene	RIKEN cDNA 4930413E15 gene
5	gene	118.99456	118.99700	negative	MGI_C57BL6J_5663921	Gm43784	ENSEMBL:ENSMUSG00000107371	MGI:5663921	unclassified gene	predicted gene 43784
5	gene	119.05363	119.07529	positive	MGI_C57BL6J_5590054	Gm30895	NCBI_Gene:102632950	MGI:5590054	lncRNA gene	predicted gene, 30895
5	gene	119.07563	119.08681	negative	MGI_C57BL6J_5590193	Gm31034	NCBI_Gene:102633129	MGI:5590193	lncRNA gene	predicted gene, 31034
5	gene	119.10823	119.11454	positive	MGI_C57BL6J_1920727	1700081H04Rik	NCBI_Gene:73477,ENSEMBL:ENSMUSG00000100573	MGI:1920727	lncRNA gene	RIKEN cDNA 1700081H04 gene
5	gene	119.13365	119.13841	positive	MGI_C57BL6J_5590288	Gm31129	NCBI_Gene:102633262	MGI:5590288	lncRNA gene	predicted gene, 31129
5	gene	119.19431	119.20002	negative	MGI_C57BL6J_3647618	Gm7538	NCBI_Gene:665194,ENSEMBL:ENSMUSG00000107334	MGI:3647618	lncRNA gene	predicted gene 7538
5	gene	119.28024	119.30043	negative	MGI_C57BL6J_5590349	Gm31190	NCBI_Gene:102633342	MGI:5590349	lncRNA gene	predicted gene, 31190
5	gene	119.29725	119.29736	positive	MGI_C57BL6J_4422040	n-R5s175	ENSEMBL:ENSMUSG00000084548	MGI:4422040	rRNA gene	nuclear encoded rRNA 5S 175
5	gene	119.32600	119.33053	positive	MGI_C57BL6J_5624901	Gm42016	NCBI_Gene:105246777	MGI:5624901	lncRNA gene	predicted gene, 42016
5	gene	119.47214	119.52798	negative	MGI_C57BL6J_5590473	Gm31314	NCBI_Gene:102633504,ENSEMBL:ENSMUSG00000106938	MGI:5590473	lncRNA gene	predicted gene, 31314
5	gene	119.57013	119.58036	negative	MGI_C57BL6J_2141225	AW549542	NCBI_Gene:100993	MGI:2141225	lncRNA gene	expressed sequence AW549542
5	gene	119.57013	119.67136	negative	MGI_C57BL6J_3780472	Tbx3os1	NCBI_Gene:100039542,ENSEMBL:ENSMUSG00000087516	MGI:3780472	antisense lncRNA gene	T-box 3, opposite strand 1
5	gene	119.59583	119.59820	negative	MGI_C57BL6J_5663536	Gm43399	ENSEMBL:ENSMUSG00000106991	MGI:5663536	unclassified gene	predicted gene 43399
5	gene	119.62594	119.63446	positive	MGI_C57BL6J_3801955	Gm16063	NCBI_Gene:330183,ENSEMBL:ENSMUSG00000085708	MGI:3801955	lncRNA gene	predicted gene 16063
5	gene	119.64597	119.65926	positive	MGI_C57BL6J_3801956	Gm16064	NCBI_Gene:105246778,ENSEMBL:ENSMUSG00000085345	MGI:3801956	lncRNA gene	predicted gene 16064
5	gene	119.67032	119.68472	positive	MGI_C57BL6J_98495	Tbx3	NCBI_Gene:21386,ENSEMBL:ENSMUSG00000018604	MGI:98495	protein coding gene	T-box 3
5	gene	119.68509	119.69122	negative	MGI_C57BL6J_3801954	Tbx3os2	NCBI_Gene:433944,ENSEMBL:ENSMUSG00000086847	MGI:3801954	lincRNA gene	T-box 3, opposite strand 2
5	gene	119.78446	119.78696	negative	MGI_C57BL6J_5624902	Gm42017	NCBI_Gene:105246779	MGI:5624902	lncRNA gene	predicted gene, 42017
5	gene	119.79651	119.88522	positive	MGI_C57BL6J_102541	Tbx5	NCBI_Gene:21388,ENSEMBL:ENSMUSG00000018263	MGI:102541	protein coding gene	T-box 5
5	gene	119.80268	119.83203	negative	MGI_C57BL6J_3648222	Gm5563	NCBI_Gene:433945	MGI:3648222	lncRNA gene	predicted gene 5563
5	gene	119.80533	119.80787	negative	MGI_C57BL6J_1924176	1700021F13Rik	ENSEMBL:ENSMUSG00000107053	MGI:1924176	lncRNA gene	RIKEN cDNA 1700021F13 gene
5	gene	119.82612	119.83202	negative	MGI_C57BL6J_5663187	Gm43050	ENSEMBL:ENSMUSG00000106795	MGI:5663187	lncRNA gene	predicted gene 43050
5	gene	119.91494	119.91685	positive	MGI_C57BL6J_5663406	Gm43269	ENSEMBL:ENSMUSG00000107084	MGI:5663406	lncRNA gene	predicted gene 43269
5	gene	119.95863	119.95915	negative	MGI_C57BL6J_5590932	Gm31773	NCBI_Gene:102634111	MGI:5590932	lncRNA gene	predicted gene, 31773
5	gene	119.95918	119.96338	positive	MGI_C57BL6J_5621439	Gm38554	NCBI_Gene:102641385,ENSEMBL:ENSMUSG00000107063	MGI:5621439	lncRNA gene	predicted gene, 38554
5	gene	119.97855	119.98138	positive	MGI_C57BL6J_5624903	Gm42018	NCBI_Gene:105246780	MGI:5624903	lncRNA gene	predicted gene, 42018
5	gene	120.02823	120.03196	negative	MGI_C57BL6J_5624904	Gm42019	NCBI_Gene:105246781	MGI:5624904	lncRNA gene	predicted gene, 42019
5	gene	120.06433	120.06444	positive	MGI_C57BL6J_4422041	n-R5s176	ENSEMBL:ENSMUSG00000064617	MGI:4422041	rRNA gene	nuclear encoded rRNA 5S 176
5	gene	120.11647	120.19898	positive	MGI_C57BL6J_1921361	Rbm19	NCBI_Gene:74111,ENSEMBL:ENSMUSG00000029594	MGI:1921361	protein coding gene	RNA binding motif protein 19
5	gene	120.12110	120.13926	negative	MGI_C57BL6J_3708725	Gm10390	NCBI_Gene:100503427,ENSEMBL:ENSMUSG00000097368	MGI:3708725	lncRNA gene	predicted gene 10390
5	gene	120.22203	120.23523	negative	MGI_C57BL6J_5590995	Gm31836	NCBI_Gene:102634195	MGI:5590995	lncRNA gene	predicted gene, 31836
5	gene	120.25526	120.25639	positive	MGI_C57BL6J_5662792	Gm42655	ENSEMBL:ENSMUSG00000106915	MGI:5662792	unclassified gene	predicted gene 42655
5	gene	120.28773	120.28785	positive	MGI_C57BL6J_5456251	Gm26474	ENSEMBL:ENSMUSG00000080412	MGI:5456251	miRNA gene	predicted gene, 26474
5	gene	120.33950	120.34597	negative	MGI_C57BL6J_5662791	Gm42654	ENSEMBL:ENSMUSG00000107141	MGI:5662791	lncRNA gene	predicted gene 42654
5	gene	120.41966	120.43177	negative	MGI_C57BL6J_5521042	Gm27199	NCBI_Gene:102634302,ENSEMBL:ENSMUSG00000098649	MGI:5521042	lncRNA gene	predicted gene 27199
5	gene	120.42379	120.43168	negative	MGI_C57BL6J_5591135	Gm31976	NCBI_Gene:102634380	MGI:5591135	lncRNA gene	predicted gene, 31976
5	gene	120.43170	120.44146	positive	MGI_C57BL6J_107792	Lhx5	NCBI_Gene:16873,ENSEMBL:ENSMUSG00000029595	MGI:107792	protein coding gene	LIM homeobox protein 5
5	gene	120.45819	120.47282	negative	MGI_C57BL6J_2182607	Sdsl	NCBI_Gene:257635,ENSEMBL:ENSMUSG00000029596	MGI:2182607	protein coding gene	serine dehydratase-like
5	gene	120.47653	120.48393	positive	MGI_C57BL6J_98270	Sds	NCBI_Gene:231691,ENSEMBL:ENSMUSG00000029597	MGI:98270	protein coding gene	serine dehydratase
5	gene	120.47984	120.48090	negative	MGI_C57BL6J_3783131	Gm15690	ENSEMBL:ENSMUSG00000086165	MGI:3783131	lncRNA gene	predicted gene 15690
5	gene	120.48328	120.50362	negative	MGI_C57BL6J_1919022	Plbd2	NCBI_Gene:71772,ENSEMBL:ENSMUSG00000029598	MGI:1919022	protein coding gene	phospholipase B domain containing 2
5	gene	120.51117	120.53402	positive	MGI_C57BL6J_2180781	Slc8b1	NCBI_Gene:170756,ENSEMBL:ENSMUSG00000032754	MGI:2180781	protein coding gene	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
5	gene	120.53415	120.58870	negative	MGI_C57BL6J_2182472	Tpcn1	NCBI_Gene:252972,ENSEMBL:ENSMUSG00000032741	MGI:2182472	protein coding gene	two pore channel 1
5	gene	120.55205	120.55304	negative	MGI_C57BL6J_1917539	2510016D11Rik	ENSEMBL:ENSMUSG00000106825	MGI:1917539	unclassified gene	RIKEN cDNA 2510016D11 gene
5	gene	120.58694	120.60724	positive	MGI_C57BL6J_1922982	Iqcd	NCBI_Gene:75732,ENSEMBL:ENSMUSG00000029601	MGI:1922982	protein coding gene	IQ motif containing D
5	gene	120.59431	120.60003	negative	MGI_C57BL6J_5621585	Gm38700	NCBI_Gene:105242431	MGI:5621585	lncRNA gene	predicted gene, 38700
5	gene	120.59431	120.61259	negative	MGI_C57BL6J_1922021	Rita1	NCBI_Gene:100764,ENSEMBL:ENSMUSG00000029600	MGI:1922021	protein coding gene	RBPJ interacting and tubulin associated 1
5	gene	120.60210	120.60664	negative	MGI_C57BL6J_5621350	Gm38465	NCBI_Gene:102634462	MGI:5621350	lncRNA gene	predicted gene, 38465
5	gene	120.60375	120.60425	positive	MGI_C57BL6J_1915716	1110003F02Rik	NA	NA	unclassified gene	RIKEN cDNA 1110003F02 gene
5	gene	120.61274	120.62859	positive	MGI_C57BL6J_1919240	Ddx54	NCBI_Gene:71990,ENSEMBL:ENSMUSG00000029599	MGI:1919240	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
5	gene	120.62632	120.62762	negative	MGI_C57BL6J_5663716	Gm43579	ENSEMBL:ENSMUSG00000107191	MGI:5663716	lncRNA gene	predicted gene 43579
5	gene	120.62834	120.63424	negative	MGI_C57BL6J_3779542	Cfap73	NCBI_Gene:546886,ENSEMBL:ENSMUSG00000094282	MGI:3779542	protein coding gene	cilia and flagella associated protein 73
5	pseudogene	120.64162	120.64183	positive	MGI_C57BL6J_5662794	Gm42657	ENSEMBL:ENSMUSG00000107004	MGI:5662794	pseudogene	predicted gene 42657
5	gene	120.64804	120.64875	positive	MGI_C57BL6J_3783191	Gm15749	ENSEMBL:ENSMUSG00000089830	MGI:3783191	lncRNA gene	predicted gene 15749
5	gene	120.64804	120.67961	positive	MGI_C57BL6J_1330842	Rasal1	NCBI_Gene:19415,ENSEMBL:ENSMUSG00000029602	MGI:1330842	protein coding gene	RAS protein activator like 1 (GAP1 like)
5	gene	120.68020	120.71193	negative	MGI_C57BL6J_1352744	Dtx1	NCBI_Gene:14357,ENSEMBL:ENSMUSG00000029603	MGI:1352744	protein coding gene	deltex 1, E3 ubiquitin ligase
5	gene	120.73033	120.74987	negative	MGI_C57BL6J_2180852	Oas2	NCBI_Gene:246728,ENSEMBL:ENSMUSG00000032690	MGI:2180852	protein coding gene	2’-5’ oligoadenylate synthetase 2
5	gene	120.74604	120.74731	positive	MGI_C57BL6J_5663205	Gm43068	ENSEMBL:ENSMUSG00000107075	MGI:5663205	unclassified gene	predicted gene 43068
5	gene	120.75310	120.77766	negative	MGI_C57BL6J_2180850	Oas3	NCBI_Gene:246727,ENSEMBL:ENSMUSG00000032661	MGI:2180850	protein coding gene	2’-5’ oligoadenylate synthetase 3
5	gene	120.77780	120.80562	positive	MGI_C57BL6J_5663206	Gm43069	ENSEMBL:ENSMUSG00000107179	MGI:5663206	lncRNA gene	predicted gene 43069
5	gene	120.78623	120.79600	negative	MGI_C57BL6J_2180856	Oas1e	NCBI_Gene:231699,ENSEMBL:ENSMUSG00000066867	MGI:2180856	protein coding gene	2’-5’ oligoadenylate synthetase 1E
5	gene	120.80019	120.81254	negative	MGI_C57BL6J_2149633	Oas1c	NCBI_Gene:114643,ENSEMBL:ENSMUSG00000001166	MGI:2149633	protein coding gene	2’-5’ oligoadenylate synthetase 1C
5	pseudogene	120.81264	120.82416	positive	MGI_C57BL6J_97430	Oas1b	NCBI_Gene:23961,ENSEMBL:ENSMUSG00000029605	MGI:97430	polymorphic pseudogene	2’-5’ oligoadenylate synthetase 1B
5	gene	120.84737	120.85799	positive	MGI_C57BL6J_2180855	Oas1f	NCBI_Gene:243262,ENSEMBL:ENSMUSG00000053765	MGI:2180855	protein coding gene	2’-5’ oligoadenylate synthetase 1F
5	gene	120.85217	120.85230	negative	MGI_C57BL6J_5452684	Gm22907	ENSEMBL:ENSMUSG00000092939	MGI:5452684	miRNA gene	predicted gene, 22907
5	gene	120.86142	120.87351	positive	MGI_C57BL6J_2180853	Oas1h	NCBI_Gene:246729,ENSEMBL:ENSMUSG00000001168	MGI:2180853	protein coding gene	2’-5’ oligoadenylate synthetase 1H
5	gene	120.87614	120.88761	negative	MGI_C57BL6J_97429	Oas1g	NCBI_Gene:23960,ENSEMBL:ENSMUSG00000066861	MGI:97429	protein coding gene	2’-5’ oligoadenylate synthetase 1G
5	gene	120.89626	120.90754	negative	MGI_C57BL6J_2180860	Oas1a	NCBI_Gene:246730,ENSEMBL:ENSMUSG00000052776	MGI:2180860	protein coding gene	2’-5’ oligoadenylate synthetase 1A
5	pseudogene	120.91341	120.93210	negative	MGI_C57BL6J_3645862	Gm7573	NCBI_Gene:665294	MGI:3645862	pseudogene	predicted gene 7573
5	gene	120.91454	120.92165	positive	MGI_C57BL6J_2140770	Oas1d	NCBI_Gene:100535,ENSEMBL:ENSMUSG00000032623	MGI:2140770	protein coding gene	2’-5’ oligoadenylate synthetase 1D
5	gene	120.94050	121.01010	negative	MGI_C57BL6J_102788	Rph3a	NCBI_Gene:19894,ENSEMBL:ENSMUSG00000029608	MGI:102788	protein coding gene	rabphilin 3A
5	gene	120.95040	120.95277	positive	MGI_C57BL6J_5591344	Gm32185	NCBI_Gene:102634651	MGI:5591344	lncRNA gene	predicted gene, 32185
5	gene	120.97004	120.97235	negative	MGI_C57BL6J_5662793	Gm42656	ENSEMBL:ENSMUSG00000106841	MGI:5662793	unclassified gene	predicted gene 42656
5	gene	121.13053	121.19140	negative	MGI_C57BL6J_99511	Ptpn11	NCBI_Gene:19247,ENSEMBL:ENSMUSG00000043733	MGI:99511	protein coding gene	protein tyrosine phosphatase, non-receptor type 11
5	gene	121.18174	121.18500	negative	MGI_C57BL6J_5663067	Gm42930	ENSEMBL:ENSMUSG00000106940	MGI:5663067	unclassified gene	predicted gene 42930
5	gene	121.20448	121.20924	positive	MGI_C57BL6J_108057	Rpl6	NCBI_Gene:19988,ENSEMBL:ENSMUSG00000029614	MGI:108057	protein coding gene	ribosomal protein L6
5	gene	121.20501	121.20514	positive	MGI_C57BL6J_5455982	Gm26205	ENSEMBL:ENSMUSG00000064841	MGI:5455982	snoRNA gene	predicted gene, 26205
5	gene	121.21982	121.36858	positive	MGI_C57BL6J_3647820	Hectd4	NCBI_Gene:269700,ENSEMBL:ENSMUSG00000042744	MGI:3647820	protein coding gene	HECT domain E3 ubiquitin protein ligase 4
5	gene	121.35684	121.35700	positive	MGI_C57BL6J_5454448	Gm24671	ENSEMBL:ENSMUSG00000077347	MGI:5454448	snRNA gene	predicted gene, 24671
5	gene	121.37172	121.38563	negative	MGI_C57BL6J_1923551	Trafd1	NCBI_Gene:231712,ENSEMBL:ENSMUSG00000042726	MGI:1923551	protein coding gene	TRAF type zinc finger domain containing 1
5	gene	121.38401	121.39347	positive	MGI_C57BL6J_5663054	Gm42917	ENSEMBL:ENSMUSG00000104985	MGI:5663054	lncRNA gene	predicted gene 42917
5	gene	121.38552	121.38710	positive	MGI_C57BL6J_5663055	Gm42918	ENSEMBL:ENSMUSG00000106209	MGI:5663055	lncRNA gene	predicted gene 42918
5	gene	121.38567	121.39639	positive	MGI_C57BL6J_5624905	Gm42020	NCBI_Gene:105246782	MGI:5624905	lncRNA gene	predicted gene, 42020
5	gene	121.39794	121.44438	positive	MGI_C57BL6J_2442563	Naa25	NCBI_Gene:231713,ENSEMBL:ENSMUSG00000042719	MGI:2442563	protein coding gene	N(alpha)-acetyltransferase 25, NatB auxiliary subunit
5	gene	121.40266	121.40451	positive	MGI_C57BL6J_5663557	Gm43420	ENSEMBL:ENSMUSG00000106115	MGI:5663557	unclassified gene	predicted gene 43420
5	gene	121.42859	121.45251	negative	MGI_C57BL6J_1914647	Erp29	NCBI_Gene:67397,ENSEMBL:ENSMUSG00000029616	MGI:1914647	protein coding gene	endoplasmic reticulum protein 29
5	gene	121.45189	121.52418	positive	MGI_C57BL6J_1924712	Tmem116	NCBI_Gene:77462,ENSEMBL:ENSMUSG00000029452	MGI:1924712	protein coding gene	transmembrane protein 116
5	pseudogene	121.47106	121.47282	negative	MGI_C57BL6J_3782995	Gm15546	NCBI_Gene:108169089,ENSEMBL:ENSMUSG00000082760	MGI:3782995	pseudogene	predicted gene 15546
5	gene	121.50010	121.50343	negative	MGI_C57BL6J_2429506	Adam1b	NCBI_Gene:280667,ENSEMBL:ENSMUSG00000062438	MGI:2429506	protein coding gene	a disintegrin and metallopeptidase domain 1b
5	gene	121.50351	121.50460	positive	MGI_C57BL6J_1922233	4930477O15Rik	ENSEMBL:ENSMUSG00000104999	MGI:1922233	unclassified gene	RIKEN cDNA 4930477O15 gene
5	gene	121.51858	121.54548	negative	MGI_C57BL6J_2429504	Adam1a	NCBI_Gene:280668,ENSEMBL:ENSMUSG00000072647	MGI:2429504	protein coding gene	a disintegrin and metallopeptidase domain 1a
5	gene	121.51861	121.54548	negative	MGI_C57BL6J_5663015	Gm42878	ENSEMBL:ENSMUSG00000105340	MGI:5663015	protein coding gene	predicted gene 42878
5	gene	121.52504	121.54591	negative	MGI_C57BL6J_1333110	Mapkapk5	NCBI_Gene:17165,ENSEMBL:ENSMUSG00000029454	MGI:1333110	protein coding gene	MAP kinase-activated protein kinase 5
5	pseudogene	121.53056	121.53090	negative	MGI_C57BL6J_3782996	Gm15547	ENSEMBL:ENSMUSG00000082265	MGI:3782996	pseudogene	predicted gene 15547
5	gene	121.56603	121.59382	negative	MGI_C57BL6J_99600	Aldh2	NCBI_Gene:11669,ENSEMBL:ENSMUSG00000029455	MGI:99600	protein coding gene	aldehyde dehydrogenase 2, mitochondrial
5	gene	121.59369	121.59591	positive	MGI_C57BL6J_5663016	Gm42879	ENSEMBL:ENSMUSG00000106590	MGI:5663016	unclassified gene	predicted gene 42879
5	gene	121.59677	121.61894	negative	MGI_C57BL6J_2443320	Acad12	NCBI_Gene:338350,ENSEMBL:ENSMUSG00000042647	MGI:2443320	protein coding gene	acyl-Coenzyme A dehydrogenase family, member 12
5	gene	121.62103	121.66051	negative	MGI_C57BL6J_1919235	Acad10	NCBI_Gene:71985,ENSEMBL:ENSMUSG00000029456	MGI:1919235	protein coding gene	acyl-Coenzyme A dehydrogenase family, member 10
5	gene	121.66056	121.68726	positive	MGI_C57BL6J_1919649	Brap	NCBI_Gene:72399,ENSEMBL:ENSMUSG00000029458	MGI:1919649	protein coding gene	BRCA1 associated protein
5	gene	121.71079	121.71148	negative	MGI_C57BL6J_1925708	1700064N11Rik	NA	NA	unclassified gene	RIKEN cDNA 1700064N11 gene
5	gene	121.71134	121.81649	positive	MGI_C57BL6J_1277223	Atxn2	NCBI_Gene:20239,ENSEMBL:ENSMUSG00000042605	MGI:1277223	protein coding gene	ataxin 2
5	gene	121.71511	121.71821	positive	MGI_C57BL6J_5663708	Gm43571	ENSEMBL:ENSMUSG00000106110	MGI:5663708	unclassified gene	predicted gene 43571
5	gene	121.71767	121.72740	negative	MGI_C57BL6J_4414972	Gm16552	ENSEMBL:ENSMUSG00000089729	MGI:4414972	lncRNA gene	predicted gene 16552
5	gene	121.74242	121.74572	positive	MGI_C57BL6J_5663003	Gm42866	ENSEMBL:ENSMUSG00000105179	MGI:5663003	unclassified gene	predicted gene 42866
5	gene	121.81548	121.83765	negative	MGI_C57BL6J_893598	Sh2b3	NCBI_Gene:16923,ENSEMBL:ENSMUSG00000042594	MGI:893598	protein coding gene	SH2B adaptor protein 3
5	gene	121.81921	121.81927	negative	MGI_C57BL6J_5531241	Mir7031	miRBase:MI0022880,NCBI_Gene:102465624,ENSEMBL:ENSMUSG00000099063	MGI:5531241	miRNA gene	microRNA 7031
5	gene	121.83519	121.83583	positive	MGI_C57BL6J_1913571	1700008B11Rik	ENSEMBL:ENSMUSG00000104872	MGI:1913571	lncRNA gene	RIKEN cDNA 1700008B11 gene
5	gene	121.83813	121.83926	positive	MGI_C57BL6J_5591581	Gm32422	NCBI_Gene:102634970	MGI:5591581	lncRNA gene	predicted gene, 32422
5	gene	121.84767	121.84884	negative	MGI_C57BL6J_1918553	4933437G19Rik	ENSEMBL:ENSMUSG00000104719	MGI:1918553	unclassified gene	RIKEN cDNA 4933437G19 gene
5	gene	121.84898	121.85463	positive	MGI_C57BL6J_2442708	Pheta1	NCBI_Gene:231717,ENSEMBL:ENSMUSG00000044134	MGI:2442708	protein coding gene	PH domain containing endocytic trafficking adaptor 1
5	gene	121.85614	121.86049	positive	MGI_C57BL6J_5624906	Gm42021	NCBI_Gene:105246783	MGI:5624906	lncRNA gene	predicted gene, 42021
5	gene	121.85637	122.05042	negative	MGI_C57BL6J_107321	Cux2	NCBI_Gene:13048,ENSEMBL:ENSMUSG00000042589	MGI:107321	protein coding gene	cut-like homeobox 2
5	gene	122.02533	122.02970	positive	MGI_C57BL6J_3782144	Gm3970	ENSEMBL:ENSMUSG00000105795	MGI:3782144	lncRNA gene	predicted gene 3970
5	gene	122.04838	122.05565	positive	MGI_C57BL6J_3783081	Gm15637	ENSEMBL:ENSMUSG00000087386	MGI:3783081	lncRNA gene	predicted gene 15637
5	gene	122.09321	122.09935	positive	MGI_C57BL6J_5591831	Gm32672	NCBI_Gene:102635295	MGI:5591831	lncRNA gene	predicted gene, 32672
5	gene	122.10090	122.11347	positive	MGI_C57BL6J_97272	Myl2	NCBI_Gene:17906,ENSEMBL:ENSMUSG00000013936	MGI:97272	protein coding gene	myosin, light polypeptide 2, regulatory, cardiac, slow
5	gene	122.10804	122.14082	negative	MGI_C57BL6J_3607777	Ccdc63	NCBI_Gene:330188,ENSEMBL:ENSMUSG00000043036	MGI:3607777	protein coding gene	coiled-coil domain containing 63
5	gene	122.15825	122.17527	positive	MGI_C57BL6J_104872	Ppp1cc	NCBI_Gene:19047,ENSEMBL:ENSMUSG00000004455	MGI:104872	protein coding gene	protein phosphatase 1 catalytic subunit gamma
5	gene	122.16560	122.16794	positive	MGI_C57BL6J_5662885	Gm42748	ENSEMBL:ENSMUSG00000105742	MGI:5662885	unclassified gene	predicted gene 42748
5	gene	122.20680	122.24230	positive	MGI_C57BL6J_1921346	Hvcn1	NCBI_Gene:74096,ENSEMBL:ENSMUSG00000064267	MGI:1921346	protein coding gene	hydrogen voltage-gated channel 1
5	gene	122.23785	122.26449	negative	MGI_C57BL6J_3603820	Tctn1	NCBI_Gene:654470,ENSEMBL:ENSMUSG00000038593	MGI:3603820	protein coding gene	tectonic family member 1
5	gene	122.23950	122.24001	positive	MGI_C57BL6J_1922575	4930565B19Rik	NA	NA	unclassified gene	RIKEN cDNA 4930565B19 gene
5	pseudogene	122.25300	122.25354	positive	MGI_C57BL6J_3705452	Gm15481	ENSEMBL:ENSMUSG00000082645	MGI:3705452	pseudogene	predicted gene 15481
5	gene	122.27532	122.27972	positive	MGI_C57BL6J_1920843	1700112N08Rik	NCBI_Gene:73593	MGI:1920843	lncRNA gene	RIKEN cDNA 1700112N08 gene
5	gene	122.28436	122.32428	positive	MGI_C57BL6J_2444593	Pptc7	NCBI_Gene:320717,ENSEMBL:ENSMUSG00000038582	MGI:2444593	protein coding gene	PTC7 protein phosphatase homolog
5	pseudogene	122.30242	122.30304	positive	MGI_C57BL6J_3801843	Gm15842	ENSEMBL:ENSMUSG00000083909	MGI:3801843	pseudogene	predicted gene 15842
5	gene	122.32322	122.35427	negative	MGI_C57BL6J_2385231	Rad9b	NCBI_Gene:231724,ENSEMBL:ENSMUSG00000038569	MGI:2385231	protein coding gene	RAD9 checkpoint clamp component B
5	gene	122.35437	122.36498	positive	MGI_C57BL6J_1928344	Vps29	NCBI_Gene:56433,ENSEMBL:ENSMUSG00000029462	MGI:1928344	protein coding gene	VPS29 retromer complex component
5	gene	122.36458	122.37236	negative	MGI_C57BL6J_1916198	Fam216a	NCBI_Gene:68948,ENSEMBL:ENSMUSG00000029463	MGI:1916198	protein coding gene	family with sequence similarity 216, member A
5	gene	122.37188	122.38290	positive	MGI_C57BL6J_1289326	Gpn3	NCBI_Gene:68080,ENSEMBL:ENSMUSG00000029464	MGI:1289326	protein coding gene	GPN-loop GTPase 3
5	gene	122.37741	122.37772	positive	MGI_C57BL6J_5662967	Gm42830	ENSEMBL:ENSMUSG00000104916	MGI:5662967	unclassified gene	predicted gene 42830
5	gene	122.38006	122.39481	negative	MGI_C57BL6J_5592012	Gm32853	NCBI_Gene:102635549	MGI:5592012	lncRNA gene	predicted gene, 32853
5	gene	122.39188	122.41418	positive	MGI_C57BL6J_1928375	Arpc3	NCBI_Gene:56378,ENSEMBL:ENSMUSG00000029465	MGI:1928375	protein coding gene	actin related protein 2/3 complex, subunit 3
5	gene	122.40849	122.41107	positive	MGI_C57BL6J_5662966	Gm42829	ENSEMBL:ENSMUSG00000105895	MGI:5662966	lncRNA gene	predicted gene 42829
5	gene	122.41928	122.42060	negative	MGI_C57BL6J_1925113	D730048M23Rik	NA	NA	unclassified gene	RIKEN cDNA D730048M23 gene
5	gene	122.42169	122.44491	positive	MGI_C57BL6J_1929711	Anapc7	NCBI_Gene:56317,ENSEMBL:ENSMUSG00000029466	MGI:1929711	protein coding gene	anaphase promoting complex subunit 7
5	pseudogene	122.43860	122.43891	negative	MGI_C57BL6J_3801824	Gm15846	ENSEMBL:ENSMUSG00000079906	MGI:3801824	pseudogene	predicted gene 15846
5	gene	122.45351	122.50222	negative	MGI_C57BL6J_88110	Atp2a2	NCBI_Gene:11938,ENSEMBL:ENSMUSG00000029467	MGI:88110	protein coding gene	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
5	gene	122.48280	122.48500	negative	MGI_C57BL6J_5663496	Gm43359	ENSEMBL:ENSMUSG00000105434	MGI:5663496	unclassified gene	predicted gene 43359
5	gene	122.49202	122.49491	negative	MGI_C57BL6J_5663497	Gm43360	ENSEMBL:ENSMUSG00000105970	MGI:5663497	unclassified gene	predicted gene 43360
5	gene	122.49616	122.50085	positive	MGI_C57BL6J_5663498	Gm43361	ENSEMBL:ENSMUSG00000106375	MGI:5663498	unclassified gene	predicted gene 43361
5	gene	122.50679	122.50689	positive	MGI_C57BL6J_5452742	Gm22965	ENSEMBL:ENSMUSG00000088583	MGI:5452742	snRNA gene	predicted gene, 22965
5	gene	122.51321	122.51658	positive	MGI_C57BL6J_1920518	1700040P09Rik	NCBI_Gene:102635658	MGI:1920518	lncRNA gene	RIKEN cDNA 1700040P09 gene
5	gene	122.54027	122.61455	negative	MGI_C57BL6J_1098597	Ift81	NCBI_Gene:12589,ENSEMBL:ENSMUSG00000029469	MGI:1098597	protein coding gene	intraflagellar transport 81
5	gene	122.56752	122.56810	negative	MGI_C57BL6J_5663678	Gm43541	ENSEMBL:ENSMUSG00000105815	MGI:5663678	unclassified gene	predicted gene 43541
5	pseudogene	122.57988	122.58062	positive	MGI_C57BL6J_5011126	Gm18941	NCBI_Gene:100418002	MGI:5011126	pseudogene	predicted gene, 18941
5	gene	122.58147	122.58485	positive	MGI_C57BL6J_5663438	Gm43301	ENSEMBL:ENSMUSG00000105430	MGI:5663438	lncRNA gene	predicted gene 43301
5	gene	122.62410	122.62828	positive	MGI_C57BL6J_5592147	Gm32988	NCBI_Gene:102635725	MGI:5592147	lncRNA gene	predicted gene, 32988
5	gene	122.64391	122.69143	positive	MGI_C57BL6J_1339957	P2rx7	NCBI_Gene:18439,ENSEMBL:ENSMUSG00000029468	MGI:1339957	protein coding gene	purinergic receptor P2X, ligand-gated ion channel, 7
5	gene	122.68260	122.68272	positive	MGI_C57BL6J_5531394	Mir8115	miRBase:MI0026047,NCBI_Gene:102465902,ENSEMBL:ENSMUSG00000099324	MGI:5531394	miRNA gene	microRNA 8115
5	pseudogene	122.69680	122.69954	negative	MGI_C57BL6J_3645905	Gm10064	NCBI_Gene:676564,ENSEMBL:ENSMUSG00000059352	MGI:3645905	pseudogene	predicted gene 10064
5	gene	122.70751	122.72974	positive	MGI_C57BL6J_1338859	P2rx4	NCBI_Gene:18438,ENSEMBL:ENSMUSG00000029470	MGI:1338859	protein coding gene	purinergic receptor P2X, ligand-gated ion channel 4
5	gene	122.71858	122.77947	negative	MGI_C57BL6J_2444812	Camkk2	NCBI_Gene:207565,ENSEMBL:ENSMUSG00000029471	MGI:2444812	protein coding gene	calcium/calmodulin-dependent protein kinase kinase 2, beta
5	gene	122.77953	122.78610	positive	MGI_C57BL6J_5663821	Gm43684	ENSEMBL:ENSMUSG00000105613	MGI:5663821	unclassified gene	predicted gene 43684
5	gene	122.78746	122.82134	negative	MGI_C57BL6J_1929722	Anapc5	NCBI_Gene:59008,ENSEMBL:ENSMUSG00000029472	MGI:1929722	protein coding gene	anaphase-promoting complex subunit 5
5	gene	122.84963	122.85014	negative	MGI_C57BL6J_5592203	Gm33044	NCBI_Gene:102635796	MGI:5592203	lncRNA gene	predicted gene, 33044
5	gene	122.85005	122.87129	positive	MGI_C57BL6J_2153340	Rnf34	NCBI_Gene:80751,ENSEMBL:ENSMUSG00000029474	MGI:2153340	protein coding gene	ring finger protein 34
5	gene	122.87066	122.98982	negative	MGI_C57BL6J_1354737	Kdm2b	NCBI_Gene:30841,ENSEMBL:ENSMUSG00000029475	MGI:1354737	protein coding gene	lysine (K)-specific demethylase 2B
5	gene	122.90682	122.90840	negative	MGI_C57BL6J_5663548	Gm43411	ENSEMBL:ENSMUSG00000105979	MGI:5663548	unclassified gene	predicted gene 43411
5	gene	122.94224	122.95233	positive	MGI_C57BL6J_5592277	Gm33118	NCBI_Gene:102635898	MGI:5592277	lncRNA gene	predicted gene, 33118
5	gene	122.98768	123.01287	negative	MGI_C57BL6J_5753150	Gm44574	ENSEMBL:ENSMUSG00000105311	MGI:5753150	lncRNA gene	predicted gene 44574
5	gene	122.98935	122.99835	positive	MGI_C57BL6J_1924414	A930024E05Rik	NCBI_Gene:109202,ENSEMBL:ENSMUSG00000056735	MGI:1924414	lncRNA gene	RIKEN cDNA A930024E05 gene
5	gene	123.00729	123.01508	negative	MGI_C57BL6J_3780646	Gm2479	NCBI_Gene:100039895,ENSEMBL:ENSMUSG00000106555	MGI:3780646	lncRNA gene	predicted gene 2479
5	gene	123.01507	123.03046	positive	MGI_C57BL6J_1925542	Orai1	NCBI_Gene:109305,ENSEMBL:ENSMUSG00000049686	MGI:1925542	protein coding gene	ORAI calcium release-activated calcium modulator 1
5	gene	123.03339	123.04704	negative	MGI_C57BL6J_1922140	Morn3	NCBI_Gene:74890,ENSEMBL:ENSMUSG00000029477	MGI:1922140	protein coding gene	MORN repeat containing 3
5	gene	123.03600	123.03882	positive	MGI_C57BL6J_5663549	Gm43412	ENSEMBL:ENSMUSG00000105107	MGI:5663549	unclassified gene	predicted gene 43412
5	gene	123.03786	123.04158	positive	MGI_C57BL6J_5624908	Gm42023	NCBI_Gene:105246785	MGI:5624908	lncRNA gene	predicted gene, 42023
5	gene	123.04737	123.23087	negative	MGI_C57BL6J_5477239	Gm26745	ENSEMBL:ENSMUSG00000097213	MGI:5477239	lncRNA gene	predicted gene, 26745
5	pseudogene	123.06623	123.06680	positive	MGI_C57BL6J_3648226	Gm6444	NCBI_Gene:623672,ENSEMBL:ENSMUSG00000080836	MGI:3648226	pseudogene	predicted gene 6444
5	gene	123.06842	123.11775	positive	MGI_C57BL6J_3603158	Tmem120b	NCBI_Gene:330189,ENSEMBL:ENSMUSG00000054434	MGI:3603158	protein coding gene	transmembrane protein 120B
5	gene	123.10304	123.13269	negative	MGI_C57BL6J_1345629	Rhof	NCBI_Gene:23912,ENSEMBL:ENSMUSG00000029449	MGI:1345629	protein coding gene	ras homolog family member F (in filopodia)
5	gene	123.11070	123.11226	positive	MGI_C57BL6J_5663550	Gm43413	ENSEMBL:ENSMUSG00000104951	MGI:5663550	unclassified gene	predicted gene 43413
5	gene	123.13372	123.14296	negative	MGI_C57BL6J_2140910	AI480526	NCBI_Gene:100675,ENSEMBL:ENSMUSG00000090086	MGI:2140910	lncRNA gene	expressed sequence AI480526
5	gene	123.13394	123.13769	positive	MGI_C57BL6J_5611330	Gm38102	ENSEMBL:ENSMUSG00000104156	MGI:5611330	lncRNA gene	predicted gene, 38102
5	gene	123.13893	123.14157	positive	MGI_C57BL6J_1921616	4932422M17Rik	ENSEMBL:ENSMUSG00000105881	MGI:1921616	lncRNA gene	RIKEN cDNA 4932422M17 gene
5	gene	123.14211	123.16863	positive	MGI_C57BL6J_2652820	Setd1b	NCBI_Gene:208043,ENSEMBL:ENSMUSG00000038384	MGI:2652820	protein coding gene	SET domain containing 1B
5	gene	123.15653	123.15707	negative	MGI_C57BL6J_5624909	Gm42024	NCBI_Gene:105246786	MGI:5624909	lncRNA gene	predicted gene, 42024
5	gene	123.16781	123.16863	positive	MGI_C57BL6J_1924403	9430025N12Rik	NA	NA	unclassified gene	RIKEN cDNA 9430025N12 gene
5	gene	123.16941	123.25013	positive	MGI_C57BL6J_1914401	Psmd9	NCBI_Gene:67151,ENSEMBL:ENSMUSG00000029440	MGI:1914401	protein coding gene	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
5	gene	123.17181	123.18273	negative	MGI_C57BL6J_96213	Hpd	NCBI_Gene:15445,ENSEMBL:ENSMUSG00000029445	MGI:96213	protein coding gene	4-hydroxyphenylpyruvic acid dioxygenase
5	gene	123.18870	123.19159	negative	MGI_C57BL6J_5663546	Gm43409	ENSEMBL:ENSMUSG00000104606	MGI:5663546	lncRNA gene	predicted gene 43409
5	gene	123.25202	123.25385	positive	MGI_C57BL6J_5624910	Gm42025	NCBI_Gene:105246787	MGI:5624910	lncRNA gene	predicted gene, 42025
5	gene	123.25210	123.32748	positive	MGI_C57BL6J_1918495	Wdr66	NCBI_Gene:269701,ENSEMBL:ENSMUSG00000029442	MGI:1918495	protein coding gene	WD repeat domain 66
5	pseudogene	123.25545	123.25587	negative	MGI_C57BL6J_3704258	Rpl35a-ps6	NCBI_Gene:100042824,ENSEMBL:ENSMUSG00000094664	MGI:3704258	pseudogene	ribosomal protein L35A, pseudogene 6
5	gene	123.29364	123.31032	negative	MGI_C57BL6J_3801821	Gm15857	ENSEMBL:ENSMUSG00000087063	MGI:3801821	lncRNA gene	predicted gene 15857
5	gene	123.33273	123.34514	negative	MGI_C57BL6J_3801778	Gm15860	NCBI_Gene:102641980,ENSEMBL:ENSMUSG00000087336	MGI:3801778	lncRNA gene	predicted gene 15860
5	gene	123.34383	123.37499	positive	MGI_C57BL6J_1924295	Bcl7a	NCBI_Gene:77045,ENSEMBL:ENSMUSG00000029438	MGI:1924295	protein coding gene	B cell CLL/lymphoma 7A
5	gene	123.36083	123.36100	positive	MGI_C57BL6J_5453235	Gm23458	ENSEMBL:ENSMUSG00000065191	MGI:5453235	snRNA gene	predicted gene, 23458
5	gene	123.36647	123.36892	positive	MGI_C57BL6J_1923368	5830487J09Rik	ENSEMBL:ENSMUSG00000104830	MGI:1923368	lncRNA gene	RIKEN cDNA 5830487J09 gene
5	gene	123.39365	123.39796	negative	MGI_C57BL6J_3783189	Gm15747	ENSEMBL:ENSMUSG00000086700	MGI:3783189	lncRNA gene	predicted gene 15747
5	gene	123.39480	123.45793	positive	MGI_C57BL6J_2141183	Mlxip	NCBI_Gene:208104,ENSEMBL:ENSMUSG00000038342	MGI:2141183	protein coding gene	MLX interacting protein
5	gene	123.39724	123.39939	positive	MGI_C57BL6J_5663044	Gm42907	ENSEMBL:ENSMUSG00000106254	MGI:5663044	unclassified gene	predicted gene 42907
5	gene	123.40107	123.40194	positive	MGI_C57BL6J_5663045	Gm42908	ENSEMBL:ENSMUSG00000104940	MGI:5663045	unclassified gene	predicted gene 42908
5	gene	123.40649	123.41186	positive	MGI_C57BL6J_5663950	Gm43813	ENSEMBL:ENSMUSG00000106636	MGI:5663950	lncRNA gene	predicted gene 43813
5	pseudogene	123.46649	123.46692	positive	MGI_C57BL6J_3783190	Rpl31-ps6	NCBI_Gene:673222,ENSEMBL:ENSMUSG00000082532	MGI:3783190	pseudogene	ribosomal protein L31, pseudogene 6
5	gene	123.48015	123.48949	negative	MGI_C57BL6J_1923649	Il31	NCBI_Gene:76399,ENSEMBL:ENSMUSG00000029437	MGI:1923649	protein coding gene	interleukin 31
5	gene	123.48926	123.50821	positive	MGI_C57BL6J_2685907	Lrrc43	NCBI_Gene:381741,ENSEMBL:ENSMUSG00000063409	MGI:2685907	protein coding gene	leucine rich repeat containing 43
5	gene	123.50829	123.51197	positive	MGI_C57BL6J_2680208	B3gnt4	NCBI_Gene:231727,ENSEMBL:ENSMUSG00000029431	MGI:2680208	protein coding gene	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
5	gene	123.50839	123.51401	positive	MGI_C57BL6J_3783193	Gm15751	ENSEMBL:ENSMUSG00000086753	MGI:3783193	lncRNA gene	predicted gene 15751
5	gene	123.50977	123.52418	negative	MGI_C57BL6J_1913843	Diablo	NCBI_Gene:66593,ENSEMBL:ENSMUSG00000029433	MGI:1913843	protein coding gene	diablo, IAP-binding mitochondrial protein
5	gene	123.51208	123.52549	negative	MGI_C57BL6J_6118396	Gm49027	ENSEMBL:ENSMUSG00000114278	MGI:6118396	protein coding gene	predicted gene, 49027
5	gene	123.51823	123.51837	positive	MGI_C57BL6J_5454459	Gm24682	ENSEMBL:ENSMUSG00000089389	MGI:5454459	snoRNA gene	predicted gene, 24682
5	gene	123.52264	123.52269	negative	MGI_C57BL6J_5530729	Mir7647	miRBase:MI0024985,NCBI_Gene:102465756,ENSEMBL:ENSMUSG00000098951	MGI:5530729	miRNA gene	microRNA 7647
5	gene	123.52730	123.57304	negative	MGI_C57BL6J_1924823	Vps33a	NCBI_Gene:77573,ENSEMBL:ENSMUSG00000029434	MGI:1924823	protein coding gene	VPS33A CORVET/HOPS core subunit
5	gene	123.54379	123.54436	positive	MGI_C57BL6J_1925746	1700015O03Rik	NA	NA	unclassified gene	RIKEN cDNA 1700015O03 gene
5	gene	123.56153	123.56199	negative	MGI_C57BL6J_5663270	Gm43133	ENSEMBL:ENSMUSG00000104704	MGI:5663270	unclassified gene	predicted gene 43133
5	gene	123.57779	123.68462	negative	MGI_C57BL6J_1928401	Clip1	NCBI_Gene:56430,ENSEMBL:ENSMUSG00000049550	MGI:1928401	protein coding gene	CAP-GLY domain containing linker protein 1
5	gene	123.62820	123.62835	positive	MGI_C57BL6J_5454617	Gm24840	ENSEMBL:ENSMUSG00000084552	MGI:5454617	snRNA gene	predicted gene, 24840
5	gene	123.68213	123.68347	negative	MGI_C57BL6J_5662788	Gm42651	ENSEMBL:ENSMUSG00000104877	MGI:5662788	unclassified gene	predicted gene 42651
5	gene	123.68478	123.68531	positive	MGI_C57BL6J_5663934	Gm43797	ENSEMBL:ENSMUSG00000104694	MGI:5663934	unclassified gene	predicted gene 43797
5	gene	123.69829	123.72110	negative	MGI_C57BL6J_1917900	Zcchc8	NCBI_Gene:70650,ENSEMBL:ENSMUSG00000029427	MGI:1917900	protein coding gene	zinc finger, CCHC domain containing 8
5	pseudogene	123.72515	123.72559	positive	MGI_C57BL6J_5011786	Gm19601	NCBI_Gene:102238518	MGI:5011786	pseudogene	predicted gene, 19601
5	gene	123.72843	123.74942	negative	MGI_C57BL6J_1913489	Rsrc2	NCBI_Gene:208606,ENSEMBL:ENSMUSG00000029422	MGI:1913489	protein coding gene	arginine/serine-rich coiled-coil 2
5	gene	123.74969	123.82159	positive	MGI_C57BL6J_2673709	Kntc1	NCBI_Gene:208628,ENSEMBL:ENSMUSG00000029414	MGI:2673709	protein coding gene	kinetochore associated 1
5	gene	123.86357	123.86552	negative	MGI_C57BL6J_1933383	Hcar2	NCBI_Gene:80885,ENSEMBL:ENSMUSG00000045502	MGI:1933383	protein coding gene	hydroxycarboxylic acid receptor 2
5	gene	123.87674	123.88002	negative	MGI_C57BL6J_2441671	Hcar1	NCBI_Gene:243270,ENSEMBL:ENSMUSG00000049241	MGI:2441671	protein coding gene	hydrocarboxylic acid receptor 1
5	gene	123.90717	123.92884	positive	MGI_C57BL6J_1915434	Denr	NCBI_Gene:68184,ENSEMBL:ENSMUSG00000023106	MGI:1915434	protein coding gene	density-regulated protein
5	gene	123.92742	123.93839	positive	MGI_C57BL6J_5663655	Gm43518	ENSEMBL:ENSMUSG00000105875	MGI:5663655	protein coding gene	predicted gene 43518
5	gene	123.93033	123.96989	positive	MGI_C57BL6J_2684996	Ccdc62	NCBI_Gene:208908,ENSEMBL:ENSMUSG00000061882	MGI:2684996	protein coding gene	coiled-coil domain containing 62
5	gene	123.97361	124.00556	positive	MGI_C57BL6J_1352504	Hip1r	NCBI_Gene:29816,ENSEMBL:ENSMUSG00000000915	MGI:1352504	protein coding gene	huntingtin interacting protein 1 related
5	gene	123.97387	123.97548	positive	MGI_C57BL6J_5826559	Gm46922	NCBI_Gene:108169068	MGI:5826559	lncRNA gene	predicted gene, 46922
5	gene	123.99685	123.99693	positive	MGI_C57BL6J_5530691	Mir7032	miRBase:MI0022881,NCBI_Gene:102465625,ENSEMBL:ENSMUSG00000098454	MGI:5530691	miRNA gene	microRNA 7032
5	gene	124.00464	124.03227	negative	MGI_C57BL6J_1916724	Vps37b	NCBI_Gene:330192,ENSEMBL:ENSMUSG00000066278	MGI:1916724	protein coding gene	vacuolar protein sorting 37B
5	gene	124.00465	124.00615	positive	MGI_C57BL6J_5611167	Gm37939	ENSEMBL:ENSMUSG00000102725	MGI:5611167	unclassified gene	predicted gene, 37939
5	gene	124.03236	124.07630	positive	MGI_C57BL6J_5593245	Gm34086	NCBI_Gene:102637216,ENSEMBL:ENSMUSG00000106261	MGI:5593245	lncRNA gene	predicted gene, 34086
5	gene	124.03520	124.05235	negative	MGI_C57BL6J_5663798	Gm43661	ENSEMBL:ENSMUSG00000104818	MGI:5663798	lncRNA gene	predicted gene 43661
5	gene	124.06153	124.09597	negative	MGI_C57BL6J_1861729	Abcb9	NCBI_Gene:56325,ENSEMBL:ENSMUSG00000029408	MGI:1861729	protein coding gene	ATP-binding cassette, sub-family B (MDR/TAP), member 9
5	gene	124.11106	124.11226	negative	MGI_C57BL6J_3802119	Gm16001	NCBI_Gene:108169069,ENSEMBL:ENSMUSG00000085433	MGI:3802119	lncRNA gene	predicted gene 16001
5	gene	124.11206	124.11548	positive	MGI_C57BL6J_1913877	Ogfod2	NCBI_Gene:66627,ENSEMBL:ENSMUSG00000023707	MGI:1913877	protein coding gene	2-oxoglutarate and iron-dependent oxygenase domain containing 2
5	gene	124.11609	124.11820	positive	MGI_C57BL6J_1929500	Arl6ip4	NCBI_Gene:65105,ENSEMBL:ENSMUSG00000029404	MGI:1929500	protein coding gene	ADP-ribosylation factor-like 6 interacting protein 4
5	gene	124.11869	124.24976	negative	MGI_C57BL6J_1336192	Pitpnm2	NCBI_Gene:19679,ENSEMBL:ENSMUSG00000029406	MGI:1336192	protein coding gene	phosphatidylinositol transfer protein, membrane-associated 2
5	gene	124.19482	124.20035	positive	MGI_C57BL6J_3840147	Pitpnm2os2	NCBI_Gene:105246788,ENSEMBL:ENSMUSG00000089842	MGI:3840147	antisense lncRNA gene	phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 2
5	gene	124.22973	124.23714	positive	MGI_C57BL6J_1923177	Pitpnm2os1	NCBI_Gene:75927,ENSEMBL:ENSMUSG00000090220	MGI:1923177	antisense lncRNA gene	phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 1
5	gene	124.23772	124.23843	positive	MGI_C57BL6J_5662562	Gm42425	ENSEMBL:ENSMUSG00000105759	MGI:5662562	lncRNA gene	predicted gene 42425
5	gene	124.25096	124.33076	negative	MGI_C57BL6J_2443138	Mphosph9	NCBI_Gene:269702,ENSEMBL:ENSMUSG00000038126	MGI:2443138	protein coding gene	M-phase phosphoprotein 9
5	gene	124.25776	124.25803	positive	MGI_C57BL6J_5452948	Gm23171	ENSEMBL:ENSMUSG00000087784	MGI:5452948	unclassified non-coding RNA gene	predicted gene, 23171
5	gene	124.27831	124.27991	negative	MGI_C57BL6J_5663476	Gm43339	ENSEMBL:ENSMUSG00000105382	MGI:5663476	unclassified gene	predicted gene 43339
5	gene	124.30048	124.30183	negative	MGI_C57BL6J_5663477	Gm43340	ENSEMBL:ENSMUSG00000105228	MGI:5663477	unclassified gene	predicted gene 43340
5	gene	124.32809	124.34185	positive	MGI_C57BL6J_1919900	2810006K23Rik	NCBI_Gene:72650,ENSEMBL:ENSMUSG00000047635	MGI:1919900	protein coding gene	RIKEN cDNA 2810006K23 gene
5	gene	124.34542	124.36308	negative	MGI_C57BL6J_1202069	Cdk2ap1	NCBI_Gene:13445,ENSEMBL:ENSMUSG00000029394	MGI:1202069	protein coding gene	CDK2 (cyclin-dependent kinase 2)-associated protein 1
5	gene	124.36870	124.42600	negative	MGI_C57BL6J_2384298	Sbno1	NCBI_Gene:243272,ENSEMBL:ENSMUSG00000038095	MGI:2384298	protein coding gene	strawberry notch 1
5	gene	124.42470	124.42688	positive	MGI_C57BL6J_5610643	Gm37415	ENSEMBL:ENSMUSG00000103864	MGI:5610643	unclassified gene	predicted gene, 37415
5	gene	124.42551	124.42559	negative	MGI_C57BL6J_5530868	Gm27486	ENSEMBL:ENSMUSG00000099144	MGI:5530868	miRNA gene	predicted gene, 27486
5	gene	124.43993	124.46231	positive	MGI_C57BL6J_1915206	Kmt5a	NCBI_Gene:67956,ENSEMBL:ENSMUSG00000049327	MGI:1915206	protein coding gene	lysine methyltransferase 5A
5	gene	124.46327	124.47837	negative	MGI_C57BL6J_1933112	Rilpl2	NCBI_Gene:80291,ENSEMBL:ENSMUSG00000029401	MGI:1933112	protein coding gene	Rab interacting lysosomal protein-like 2
5	pseudogene	124.47242	124.47298	positive	MGI_C57BL6J_3783066	Gm15621	NCBI_Gene:606492,ENSEMBL:ENSMUSG00000082402	MGI:3783066	pseudogene	predicted gene 15621
5	gene	124.48308	124.49133	positive	MGI_C57BL6J_1923417	Snrnp35	NCBI_Gene:76167,ENSEMBL:ENSMUSG00000029402	MGI:1923417	protein coding gene	small nuclear ribonucleoprotein 35 (U11/U12)
5	gene	124.49308	124.53243	negative	MGI_C57BL6J_1922945	Rilpl1	NCBI_Gene:75695,ENSEMBL:ENSMUSG00000029392	MGI:1922945	protein coding gene	Rab interacting lysosomal protein-like 1
5	pseudogene	124.52264	124.52312	positive	MGI_C57BL6J_3645682	Gm6046	NCBI_Gene:595150	MGI:3645682	pseudogene	predicted gene 6046
5	gene	124.53113	124.53250	positive	MGI_C57BL6J_5663171	Gm43034	ENSEMBL:ENSMUSG00000106662	MGI:5663171	unclassified gene	predicted gene 43034
5	gene	124.54069	124.55051	positive	MGI_C57BL6J_1929269	Tmed2	NCBI_Gene:56334,ENSEMBL:ENSMUSG00000029390	MGI:1929269	protein coding gene	transmembrane p24 trafficking protein 2
5	gene	124.55254	124.56966	positive	MGI_C57BL6J_1915098	Ddx55	NCBI_Gene:67848,ENSEMBL:ENSMUSG00000029389	MGI:1915098	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
5	gene	124.57021	124.57913	negative	MGI_C57BL6J_2384802	Eif2b1	NCBI_Gene:209354,ENSEMBL:ENSMUSG00000029388	MGI:2384802	protein coding gene	eukaryotic translation initiation factor 2B, subunit 1 (alpha)
5	gene	124.57914	124.59768	positive	MGI_C57BL6J_1277143	Gtf2h3	NCBI_Gene:209357,ENSEMBL:ENSMUSG00000029387	MGI:1277143	protein coding gene	general transcription factor IIH, polypeptide 3
5	gene	124.59875	124.62774	positive	MGI_C57BL6J_1915228	Tctn2	NCBI_Gene:67978,ENSEMBL:ENSMUSG00000029386	MGI:1915228	protein coding gene	tectonic family member 2
5	gene	124.62858	124.72446	positive	MGI_C57BL6J_104855	Atp6v0a2	NCBI_Gene:21871,ENSEMBL:ENSMUSG00000038023	MGI:104855	protein coding gene	ATPase, H+ transporting, lysosomal V0 subunit A2
5	gene	124.71708	124.71717	negative	MGI_C57BL6J_5454631	Gm24854	ENSEMBL:ENSMUSG00000088650	MGI:5454631	snRNA gene	predicted gene, 24854
5	gene	124.72200	124.72508	negative	MGI_C57BL6J_3605803	4930404A12Rik	ENSEMBL:ENSMUSG00000106082	MGI:3605803	lncRNA gene	RIKEN cDNA 4930404A12 gene
5	gene	124.72509	124.83431	positive	MGI_C57BL6J_1860299	Dnah10	NCBI_Gene:56087,ENSEMBL:ENSMUSG00000038011	MGI:1860299	protein coding gene	dynein, axonemal, heavy chain 10
5	gene	124.81780	124.81831	negative	MGI_C57BL6J_5663914	Gm43777	ENSEMBL:ENSMUSG00000105583	MGI:5663914	lncRNA gene	predicted gene 43777
5	gene	124.83442	124.86242	negative	MGI_C57BL6J_106485	Ccdc92	NCBI_Gene:215707,ENSEMBL:ENSMUSG00000037979	MGI:106485	protein coding gene	coiled-coil domain containing 92
5	gene	124.86269	124.90269	positive	MGI_C57BL6J_2442505	Zfp664	NCBI_Gene:269704,ENSEMBL:ENSMUSG00000079215	MGI:2442505	protein coding gene	zinc finger protein 664
5	gene	124.89498	124.89850	negative	MGI_C57BL6J_5591608	Gm32449	NCBI_Gene:102635004	MGI:5591608	lncRNA gene	predicted gene, 32449
5	gene	124.89978	124.90575	positive	MGI_C57BL6J_5623205	Gm40320	NCBI_Gene:105244768	MGI:5623205	lncRNA gene	predicted gene, 40320
5	gene	124.95424	124.97791	negative	MGI_C57BL6J_5623206	Gm40321	NCBI_Gene:105244769	MGI:5623206	lncRNA gene	predicted gene, 40321
5	gene	124.97851	124.97998	positive	MGI_C57BL6J_5591688	Gm32529	NCBI_Gene:102635109	MGI:5591688	lncRNA gene	predicted gene, 32529
5	gene	125.00322	125.01255	positive	MGI_C57BL6J_1920371	Rflna	NCBI_Gene:73121,ENSEMBL:ENSMUSG00000037962	MGI:1920371	protein coding gene	refilin A
5	gene	125.01715	125.17922	negative	MGI_C57BL6J_1337080	Ncor2	NCBI_Gene:20602,ENSEMBL:ENSMUSG00000029478	MGI:1337080	protein coding gene	nuclear receptor co-repressor 2
5	gene	125.05784	125.05837	positive	MGI_C57BL6J_5662975	Gm42838	ENSEMBL:ENSMUSG00000105604	MGI:5662975	lncRNA gene	predicted gene 42838
5	gene	125.08684	125.09036	positive	MGI_C57BL6J_5662976	Gm42839	ENSEMBL:ENSMUSG00000106663	MGI:5662976	lncRNA gene	predicted gene 42839
5	gene	125.23831	125.27281	negative	MGI_C57BL6J_5591744	Gm32585	NCBI_Gene:102635182,ENSEMBL:ENSMUSG00000105039	MGI:5591744	lncRNA gene	predicted gene, 32585
5	gene	125.27709	125.34109	negative	MGI_C57BL6J_893578	Scarb1	NCBI_Gene:20778,ENSEMBL:ENSMUSG00000037936	MGI:893578	protein coding gene	scavenger receptor class B, member 1
5	gene	125.30323	125.31259	positive	MGI_C57BL6J_5591860	Gm32701	NCBI_Gene:102635335	MGI:5591860	lncRNA gene	predicted gene, 32701
5	gene	125.31868	125.32144	negative	MGI_C57BL6J_5662770	Gm42633	ENSEMBL:ENSMUSG00000106458	MGI:5662770	unclassified gene	predicted gene 42633
5	gene	125.36118	125.37143	positive	MGI_C57BL6J_5623208	Gm40323	NCBI_Gene:105244771,ENSEMBL:ENSMUSG00000104932	MGI:5623208	lncRNA gene	predicted gene, 40323
5	gene	125.37482	125.37977	positive	MGI_C57BL6J_5623209	Gm40324	NCBI_Gene:105244772	MGI:5623209	lncRNA gene	predicted gene, 40324
5	gene	125.38596	125.39020	negative	MGI_C57BL6J_98889	Ubc	NCBI_Gene:22190,ENSEMBL:ENSMUSG00000008348	MGI:98889	protein coding gene	ubiquitin C
5	gene	125.38932	125.39056	positive	MGI_C57BL6J_3647829	Gm10382	ENSEMBL:ENSMUSG00000072612	MGI:3647829	protein coding gene	predicted gene 10382
5	gene	125.40331	125.40334	positive	MGI_C57BL6J_1919403	2610020P09Rik	NA	NA	unclassified gene	RIKEN cDNA 2610020P09 gene
5	gene	125.40425	125.40432	negative	MGI_C57BL6J_4413712	n-TAtgc10	NCBI_Gene:102467463	MGI:4413712	tRNA gene	nuclear encoded tRNA alanine 10 (anticodon TGC)
5	gene	125.40561	125.40568	negative	MGI_C57BL6J_4413766	n-TDgtc15	NCBI_Gene:102467486	MGI:4413766	tRNA gene	nuclear encoded tRNA aspartic acid 15 (anticodon GTC)
5	gene	125.40605	125.40613	negative	MGI_C57BL6J_4414002	n-TFgaa7	NCBI_Gene:102467363	MGI:4414002	tRNA gene	nuclear encoded tRNA pheylalanine 7 (anticodon GAA)
5	gene	125.40902	125.40909	negative	MGI_C57BL6J_4413765	n-TDgtc14	NCBI_Gene:102467265	MGI:4413765	tRNA gene	nuclear encoded tRNA aspartic acid 14 (anticodon GTC)
5	gene	125.40947	125.40954	positive	MGI_C57BL6J_4413707	n-TAtgc5	NCBI_Gene:102467420	MGI:4413707	tRNA gene	nuclear encoded tRNA alanine 5 (anticodon TGC)
5	gene	125.41375	125.43415	negative	MGI_C57BL6J_3028576	Dhx37	NCBI_Gene:208144,ENSEMBL:ENSMUSG00000029480	MGI:3028576	protein coding gene	DEAH (Asp-Glu-Ala-His) box polypeptide 37
5	pseudogene	125.43507	125.43577	positive	MGI_C57BL6J_5663889	Gm43752	ENSEMBL:ENSMUSG00000106271	MGI:5663889	pseudogene	predicted gene 43752
5	gene	125.44154	125.46089	positive	MGI_C57BL6J_1924059	Bri3bp	NCBI_Gene:76809,ENSEMBL:ENSMUSG00000037905	MGI:1924059	protein coding gene	Bri3 binding protein
5	gene	125.46457	125.46693	positive	MGI_C57BL6J_5623210	Gm40325	NCBI_Gene:105244773	MGI:5623210	lncRNA gene	predicted gene, 40325
5	gene	125.47150	125.47433	positive	MGI_C57BL6J_5663893	Gm43756	ENSEMBL:ENSMUSG00000104793	MGI:5663893	unclassified gene	predicted gene 43756
5	gene	125.47581	125.51741	positive	MGI_C57BL6J_1926144	Aacs	NCBI_Gene:78894,ENSEMBL:ENSMUSG00000029482	MGI:1926144	protein coding gene	acetoacetyl-CoA synthetase
5	gene	125.47938	125.47945	positive	MGI_C57BL6J_5530933	Gm27551	ENSEMBL:ENSMUSG00000098350	MGI:5530933	miRNA gene	predicted gene, 27551
5	gene	125.53177	125.79258	positive	MGI_C57BL6J_3609245	Tmem132b	NCBI_Gene:208151,ENSEMBL:ENSMUSG00000070498	MGI:3609245	protein coding gene	transmembrane protein 132B
5	gene	125.76177	125.76731	negative	MGI_C57BL6J_5591970	Gm32811	NCBI_Gene:102635485	MGI:5591970	lncRNA gene	predicted gene, 32811
5	gene	125.81673	125.83810	negative	MGI_C57BL6J_5623212	Gm40327	NCBI_Gene:105244775	MGI:5623212	lncRNA gene	predicted gene, 40327
5	pseudogene	125.84710	125.84994	negative	MGI_C57BL6J_3648712	Gm4868	NCBI_Gene:231736,ENSEMBL:ENSMUSG00000091970	MGI:3648712	pseudogene	predicted gene 4868
5	gene	125.86000	125.86187	negative	MGI_C57BL6J_5623213	Gm40328	NCBI_Gene:105244776	MGI:5623213	lncRNA gene	predicted gene, 40328
5	gene	125.91184	125.92680	negative	MGI_C57BL6J_5592145	Gm32986	NCBI_Gene:102635723	MGI:5592145	lncRNA gene	predicted gene, 32986
5	gene	125.92876	125.95263	positive	MGI_C57BL6J_1920646	1700048F04Rik	NCBI_Gene:73396,ENSEMBL:ENSMUSG00000105274	MGI:1920646	lncRNA gene	RIKEN cDNA 1700048F04 gene
5	gene	125.95841	125.96585	negative	MGI_C57BL6J_5663082	Gm42945	ENSEMBL:ENSMUSG00000106378	MGI:5663082	lncRNA gene	predicted gene 42945
5	gene	125.96353	125.98843	positive	MGI_C57BL6J_5663089	Gm42952	ENSEMBL:ENSMUSG00000105593	MGI:5663089	lncRNA gene	predicted gene 42952
5	pseudogene	126.02549	126.02647	negative	MGI_C57BL6J_3646056	Gm7774	NCBI_Gene:665760,ENSEMBL:ENSMUSG00000105189	MGI:3646056	pseudogene	predicted gene 7774
5	gene	126.04119	126.04401	positive	MGI_C57BL6J_5623214	Gm40329	NCBI_Gene:105244777	MGI:5623214	lncRNA gene	predicted gene, 40329
5	gene	126.38955	126.38965	negative	MGI_C57BL6J_5452928	Gm23151	ENSEMBL:ENSMUSG00000094875	MGI:5452928	snRNA gene	predicted gene, 23151
5	gene	126.44846	126.44942	positive	MGI_C57BL6J_5610928	Gm37700	ENSEMBL:ENSMUSG00000104175	MGI:5610928	unclassified gene	predicted gene, 37700
5	gene	126.50277	126.50498	negative	MGI_C57BL6J_5623215	Gm40330	NCBI_Gene:105244778,ENSEMBL:ENSMUSG00000104825	MGI:5623215	lncRNA gene	predicted gene, 40330
5	gene	126.51387	126.51398	negative	MGI_C57BL6J_5454616	Gm24839	ENSEMBL:ENSMUSG00000084551	MGI:5454616	snRNA gene	predicted gene, 24839
5	gene	126.69428	126.70660	positive	MGI_C57BL6J_5592398	Gm33239	NCBI_Gene:102636066	MGI:5592398	lncRNA gene	predicted gene, 33239
5	gene	126.70660	126.74933	positive	MGI_C57BL6J_1920750	1700081B01Rik	NCBI_Gene:73500,ENSEMBL:ENSMUSG00000105673	MGI:1920750	lncRNA gene	RIKEN cDNA 1700081B01 gene
5	gene	126.72175	126.72729	negative	MGI_C57BL6J_5592506	Gm33347	NCBI_Gene:102636215,ENSEMBL:ENSMUSG00000106235	MGI:5592506	lncRNA gene	predicted gene, 33347
5	gene	126.78767	126.90448	positive	MGI_C57BL6J_5623216	Gm40331	NCBI_Gene:105244779,ENSEMBL:ENSMUSG00000106644	MGI:5623216	lncRNA gene	predicted gene, 40331
5	gene	126.79726	126.81548	negative	MGI_C57BL6J_5663090	Gm42953	ENSEMBL:ENSMUSG00000105316	MGI:5663090	lncRNA gene	predicted gene 42953
5	gene	127.02023	127.02362	positive	MGI_C57BL6J_5663092	Gm42955	ENSEMBL:ENSMUSG00000105782	MGI:5663092	unclassified gene	predicted gene 42955
5	gene	127.02738	127.08853	positive	MGI_C57BL6J_1918497	4933438B17Rik	NCBI_Gene:71247,ENSEMBL:ENSMUSG00000105490	MGI:1918497	lncRNA gene	RIKEN cDNA 4933438B17 gene
5	gene	127.07009	127.10744	negative	MGI_C57BL6J_5592650	Gm33491	NCBI_Gene:102636426	MGI:5592650	lncRNA gene	predicted gene, 33491
5	gene	127.10807	127.10886	positive	MGI_C57BL6J_5663612	Gm43475	ENSEMBL:ENSMUSG00000105575	MGI:5663612	lncRNA gene	predicted gene 43475
5	gene	127.17056	127.18436	positive	MGI_C57BL6J_1923166	4930572K03Rik	NCBI_Gene:75916,ENSEMBL:ENSMUSG00000105308	MGI:1923166	lncRNA gene	RIKEN cDNA 4930572K03 gene
5	gene	127.20069	127.20110	negative	MGI_C57BL6J_5663613	Gm43476	ENSEMBL:ENSMUSG00000104778	MGI:5663613	lncRNA gene	predicted gene 43476
5	gene	127.20236	127.23053	negative	MGI_C57BL6J_1925291	4930548G05Rik	NCBI_Gene:102636581	MGI:1925291	lncRNA gene	RIKEN cDNA 4930548G05 gene
5	gene	127.24181	127.56579	positive	MGI_C57BL6J_2443061	Tmem132c	NCBI_Gene:208213,ENSEMBL:ENSMUSG00000034324	MGI:2443061	protein coding gene	transmembrane protein 132C
5	gene	127.25686	127.28163	negative	MGI_C57BL6J_1914601	Tmem132cos	NCBI_Gene:67351,ENSEMBL:ENSMUSG00000087104	MGI:1914601	antisense lncRNA gene	transmembrane protein 132C, opposite strand
5	gene	127.30902	127.31010	positive	MGI_C57BL6J_1924687	9430087B13Rik	ENSEMBL:ENSMUSG00000104971	MGI:1924687	unclassified gene	RIKEN cDNA 9430087B13 gene
5	gene	127.57875	127.58011	positive	MGI_C57BL6J_5663117	Gm42980	ENSEMBL:ENSMUSG00000106015	MGI:5663117	lncRNA gene	predicted gene 42980
5	gene	127.59548	127.63290	negative	MGI_C57BL6J_2140796	Slc15a4	NCBI_Gene:100561,ENSEMBL:ENSMUSG00000029416	MGI:2140796	protein coding gene	solute carrier family 15, member 4
5	gene	127.61699	127.61777	positive	MGI_C57BL6J_5663611	Gm43474	ENSEMBL:ENSMUSG00000105362	MGI:5663611	unclassified gene	predicted gene 43474
5	gene	127.63213	127.70937	positive	MGI_C57BL6J_2442755	Glt1d1	NCBI_Gene:319804,ENSEMBL:ENSMUSG00000049971	MGI:2442755	protein coding gene	glycosyltransferase 1 domain containing 1
5	gene	127.78163	128.43308	negative	MGI_C57BL6J_3044963	Tmem132d	NCBI_Gene:243274,ENSEMBL:ENSMUSG00000034310	MGI:3044963	protein coding gene	transmembrane protein 132D
5	pseudogene	127.87733	127.87849	positive	MGI_C57BL6J_4937959	Gm17132	ENSEMBL:ENSMUSG00000061331	MGI:4937959	pseudogene	predicted gene 17132
5	pseudogene	127.87853	127.88238	positive	MGI_C57BL6J_4937958	Gm17131	ENSEMBL:ENSMUSG00000085328	MGI:4937958	pseudogene	predicted gene 17131
5	gene	128.23938	128.24134	negative	MGI_C57BL6J_5662634	Gm42497	ENSEMBL:ENSMUSG00000104581	MGI:5662634	unclassified gene	predicted gene 42497
5	gene	128.29563	128.29887	negative	MGI_C57BL6J_5662633	Gm42496	ENSEMBL:ENSMUSG00000105772	MGI:5662633	unclassified gene	predicted gene 42496
5	gene	128.33678	128.34278	positive	MGI_C57BL6J_5662954	Gm42817	ENSEMBL:ENSMUSG00000105857	MGI:5662954	lncRNA gene	predicted gene 42817
5	gene	128.44349	128.44980	positive	MGI_C57BL6J_5592897	Gm33738	NCBI_Gene:102636754	MGI:5592897	lncRNA gene	predicted gene, 33738
5	gene	128.44442	128.44773	positive	MGI_C57BL6J_5662632	Gm42495	ENSEMBL:ENSMUSG00000106275	MGI:5662632	lncRNA gene	predicted gene 42495
5	gene	128.44890	128.44978	positive	MGI_C57BL6J_5662637	Gm42500	ENSEMBL:ENSMUSG00000104727	MGI:5662637	lncRNA gene	predicted gene 42500
5	gene	128.51612	128.51763	negative	MGI_C57BL6J_1925468	4930573I07Rik	ENSEMBL:ENSMUSG00000104980	MGI:1925468	lncRNA gene	RIKEN cDNA 4930573I07 gene
5	gene	128.52022	128.52163	positive	MGI_C57BL6J_5662636	Gm42499	ENSEMBL:ENSMUSG00000105172	MGI:5662636	unclassified gene	predicted gene 42499
5	gene	128.57019	128.57653	positive	MGI_C57BL6J_5621497	Gm38612	NCBI_Gene:102642489	MGI:5621497	lncRNA gene	predicted gene, 38612
5	gene	128.57911	128.60069	negative	MGI_C57BL6J_2442398	Fzd10os	NCBI_Gene:319616,ENSEMBL:ENSMUSG00000072591	MGI:2442398	lincRNA gene	frizzled class receptor 10, opposite strand
5	gene	128.59659	128.59796	negative	MGI_C57BL6J_5662635	Gm42498	ENSEMBL:ENSMUSG00000105059	MGI:5662635	unclassified gene	predicted gene 42498
5	gene	128.60084	128.60409	positive	MGI_C57BL6J_2136761	Fzd10	NCBI_Gene:93897,ENSEMBL:ENSMUSG00000081683	MGI:2136761	protein coding gene	frizzled class receptor 10
5	gene	128.64415	128.65681	negative	MGI_C57BL6J_5593090	Gm33931	NCBI_Gene:102637018	MGI:5593090	lncRNA gene	predicted gene, 33931
5	gene	128.70252	128.75547	positive	MGI_C57BL6J_1928897	Piwil1	NCBI_Gene:57749,ENSEMBL:ENSMUSG00000029423	MGI:1928897	protein coding gene	piwi-like RNA-mediated gene silencing 1
5	gene	128.70542	128.70940	negative	MGI_C57BL6J_5593154	Gm33995	NCBI_Gene:102637096	MGI:5593154	lncRNA gene	predicted gene, 33995
5	gene	128.73536	128.73603	negative	MGI_C57BL6J_1922494	4930553I04Rik	ENSEMBL:ENSMUSG00000105483	MGI:1922494	unclassified gene	RIKEN cDNA 4930553I04 gene
5	gene	128.75779	128.95365	negative	MGI_C57BL6J_2443235	Rimbp2	NCBI_Gene:231760,ENSEMBL:ENSMUSG00000029420	MGI:2443235	protein coding gene	RIMS binding protein 2
5	gene	128.76952	128.77784	positive	MGI_C57BL6J_5663012	Gm42875	ENSEMBL:ENSMUSG00000105271	MGI:5663012	lncRNA gene	predicted gene 42875
5	gene	128.77453	128.77555	negative	MGI_C57BL6J_5663008	Gm42871	ENSEMBL:ENSMUSG00000106522	MGI:5663008	lncRNA gene	predicted gene 42871
5	gene	128.81793	128.82170	positive	MGI_C57BL6J_5593216	Gm34057	NCBI_Gene:102637178	MGI:5593216	lncRNA gene	predicted gene, 34057
5	gene	128.98456	129.00860	negative	MGI_C57BL6J_108059	Stx2	NCBI_Gene:13852,ENSEMBL:ENSMUSG00000029428	MGI:108059	protein coding gene	syntaxin 2
5	gene	129.02007	129.02432	positive	MGI_C57BL6J_1333112	Ran	NCBI_Gene:19384,ENSEMBL:ENSMUSG00000029430	MGI:1333112	protein coding gene	RAN, member RAS oncogene family
5	gene	129.06358	129.06891	positive	MGI_C57BL6J_5621500	Gm38615	NCBI_Gene:102642556	MGI:5621500	lncRNA gene	predicted gene, 38615
5	gene	129.09667	129.20460	positive	MGI_C57BL6J_3041203	Adgrd1	NCBI_Gene:243277,ENSEMBL:ENSMUSG00000044017	MGI:3041203	protein coding gene	adhesion G protein-coupled receptor D1
5	gene	129.11338	129.11790	negative	MGI_C57BL6J_5826560	Gm46923	NCBI_Gene:108169070	MGI:5826560	lncRNA gene	predicted gene, 46923
5	pseudogene	129.12802	129.12857	negative	MGI_C57BL6J_3704259	Rps16-ps2	NCBI_Gene:100039355,ENSEMBL:ENSMUSG00000060419	MGI:3704259	pseudogene	ribosomal protein S16, pseudogene 2
5	gene	129.30660	129.30801	negative	MGI_C57BL6J_5593304	Gm34145	NCBI_Gene:102637297	MGI:5593304	lncRNA gene	predicted gene, 34145
5	gene	129.36274	129.38113	positive	MGI_C57BL6J_5663138	Gm43001	NCBI_Gene:108169071,ENSEMBL:ENSMUSG00000104681	MGI:5663138	lncRNA gene	predicted gene 43001
5	gene	129.49323	129.49742	positive	MGI_C57BL6J_5593627	Gm34468	NCBI_Gene:102637732	MGI:5593627	lncRNA gene	predicted gene, 34468
5	gene	129.49387	129.49438	negative	MGI_C57BL6J_5623218	Gm40333	NCBI_Gene:105244781	MGI:5623218	lncRNA gene	predicted gene, 40333
5	gene	129.50006	129.50116	negative	MGI_C57BL6J_5623217	Gm40332	NCBI_Gene:105244780,ENSEMBL:ENSMUSG00000104873	MGI:5623217	lncRNA gene	predicted gene, 40332
5	gene	129.50122	129.57138	positive	MGI_C57BL6J_101760	Sfswap	NCBI_Gene:231769,ENSEMBL:ENSMUSG00000029439	MGI:101760	protein coding gene	splicing factor SWAP
5	gene	129.55615	129.55837	positive	MGI_C57BL6J_5663116	Gm42979	ENSEMBL:ENSMUSG00000104814	MGI:5663116	unclassified gene	predicted gene 42979
5	gene	129.58417	129.61110	positive	MGI_C57BL6J_1346076	Mmp17	NCBI_Gene:23948,ENSEMBL:ENSMUSG00000029436	MGI:1346076	protein coding gene	matrix metallopeptidase 17
5	pseudogene	129.62299	129.62389	negative	MGI_C57BL6J_3643279	Gm6139	NCBI_Gene:108169072,ENSEMBL:ENSMUSG00000057244	MGI:3643279	pseudogene	predicted gene 6139
5	pseudogene	129.63426	129.64030	positive	MGI_C57BL6J_5010575	Gm18390	NCBI_Gene:100417059	MGI:5010575	pseudogene	predicted gene, 18390
5	gene	129.65459	129.67010	negative	MGI_C57BL6J_99156	Zfp11	NCBI_Gene:22648,ENSEMBL:ENSMUSG00000051034	MGI:99156	protein coding gene	zinc finger protein 11
5	gene	129.68339	129.70851	negative	MGI_C57BL6J_1921472	Sept14	NCBI_Gene:74222,ENSEMBL:ENSMUSG00000034219	MGI:1921472	protein coding gene	septin 14
5	gene	129.71544	129.72256	positive	MGI_C57BL6J_1913508	Mrps17	NCBI_Gene:66258,ENSEMBL:ENSMUSG00000034211	MGI:1913508	protein coding gene	mitochondrial ribosomal protein S17
5	gene	129.72504	129.75833	positive	MGI_C57BL6J_1278343	Nipsnap2	NCBI_Gene:14467,ENSEMBL:ENSMUSG00000029432	MGI:1278343	protein coding gene	nipsnap homolog 2
5	gene	129.72705	129.73169	positive	MGI_C57BL6J_3802037	Gm15903	ENSEMBL:ENSMUSG00000086916	MGI:3802037	lncRNA gene	predicted gene 15903
5	gene	129.76556	129.78745	negative	MGI_C57BL6J_97788	Psph	NCBI_Gene:100678,ENSEMBL:ENSMUSG00000029446	MGI:97788	protein coding gene	phosphoserine phosphatase
5	gene	129.78700	129.84644	positive	MGI_C57BL6J_107943	Cct6a	NCBI_Gene:12466,ENSEMBL:ENSMUSG00000029447	MGI:107943	protein coding gene	chaperonin containing Tcp1, subunit 6a (zeta)
5	gene	129.78954	129.78967	positive	MGI_C57BL6J_5453022	Gm23245	ENSEMBL:ENSMUSG00000065304	MGI:5453022	snoRNA gene	predicted gene, 23245
5	gene	129.79455	129.79468	positive	MGI_C57BL6J_3819490	Snora15	NCBI_Gene:100113364,ENSEMBL:ENSMUSG00000093413	MGI:3819490	snoRNA gene	small nucleolar RNA, H/ACA box 15
5	gene	129.84699	129.86405	positive	MGI_C57BL6J_1915152	Sumf2	NCBI_Gene:67902,ENSEMBL:ENSMUSG00000025538	MGI:1915152	protein coding gene	sulfatase modifying factor 2
5	gene	129.86342	129.89855	negative	MGI_C57BL6J_97579	Phkg1	NCBI_Gene:18682,ENSEMBL:ENSMUSG00000025537	MGI:97579	protein coding gene	phosphorylase kinase gamma 1
5	gene	129.87598	129.87695	negative	MGI_C57BL6J_5662927	Gm42790	ENSEMBL:ENSMUSG00000106840	MGI:5662927	unclassified gene	predicted gene 42790
5	gene	129.88116	129.88747	negative	MGI_C57BL6J_1261428	Chchd2	NCBI_Gene:14004,ENSEMBL:ENSMUSG00000070493	MGI:1261428	protein coding gene	coiled-coil-helix-coiled-coil-helix domain containing 2
5	gene	129.89572	129.90851	positive	MGI_C57BL6J_1919220	Zbed5	NCBI_Gene:71970,ENSEMBL:ENSMUSG00000034173	MGI:1919220	protein coding gene	zinc finger, BED type containing 5
5	gene	129.90854	129.91379	positive	MGI_C57BL6J_1923099	Nupr1l	NCBI_Gene:69034,ENSEMBL:ENSMUSG00000095789	MGI:1923099	protein coding gene	nuclear protein transcriptional regulator 1 like
5	gene	129.94197	129.98669	positive	MGI_C57BL6J_1916818	Vkorc1l1	NCBI_Gene:69568,ENSEMBL:ENSMUSG00000066735	MGI:1916818	protein coding gene	vitamin K epoxide reductase complex, subunit 1-like 1
5	gene	129.94558	129.94896	positive	MGI_C57BL6J_5663123	Gm42986	ENSEMBL:ENSMUSG00000107118	MGI:5663123	unclassified gene	predicted gene 42986
5	gene	129.96437	129.96623	positive	MGI_C57BL6J_5663619	Gm43482	ENSEMBL:ENSMUSG00000106757	MGI:5663619	unclassified gene	predicted gene 43482
5	gene	129.98901	130.00305	negative	MGI_C57BL6J_95872	Gusb	NCBI_Gene:110006,ENSEMBL:ENSMUSG00000025534	MGI:95872	protein coding gene	glucuronidase, beta
5	gene	130.01126	130.02925	negative	MGI_C57BL6J_88084	Asl	NCBI_Gene:109900,ENSEMBL:ENSMUSG00000025533	MGI:88084	protein coding gene	argininosuccinate lyase
5	gene	130.02513	130.02811	negative	MGI_C57BL6J_5623219	Gm40334	NCBI_Gene:105244784	MGI:5623219	lncRNA gene	predicted gene, 40334
5	gene	130.02929	130.06079	positive	MGI_C57BL6J_1100818	Crcp	NCBI_Gene:12909,ENSEMBL:ENSMUSG00000025532	MGI:1100818	protein coding gene	calcitonin gene-related peptide-receptor component protein
5	gene	130.07333	130.13573	positive	MGI_C57BL6J_1298231	Tpst1	NCBI_Gene:22021,ENSEMBL:ENSMUSG00000034118	MGI:1298231	protein coding gene	protein-tyrosine sulfotransferase 1
5	gene	130.13133	130.13182	positive	MGI_C57BL6J_1919625	2210412B16Rik	ENSEMBL:ENSMUSG00000107216	MGI:1919625	unclassified gene	RIKEN cDNA 2210412B16 gene
5	gene	130.14375	130.15581	positive	MGI_C57BL6J_2442265	Kctd7	NCBI_Gene:212919,ENSEMBL:ENSMUSG00000034110	MGI:2442265	protein coding gene	potassium channel tetramerisation domain containing 7
5	gene	130.17179	130.21434	positive	MGI_C57BL6J_1929459	Rabgef1	NCBI_Gene:56715,ENSEMBL:ENSMUSG00000025340	MGI:1929459	protein coding gene	RAB guanine nucleotide exchange factor (GEF) 1
5	pseudogene	130.18840	130.18880	positive	MGI_C57BL6J_3801934	Gm15920	ENSEMBL:ENSMUSG00000080893	MGI:3801934	pseudogene	predicted gene 15920
5	pseudogene	130.20807	130.20868	negative	MGI_C57BL6J_3801933	Gm15921	NCBI_Gene:108169073,ENSEMBL:ENSMUSG00000094092	MGI:3801933	pseudogene	predicted gene 15921
5	gene	130.21708	130.24376	positive	MGI_C57BL6J_1918917	Tmem248	NCBI_Gene:71667,ENSEMBL:ENSMUSG00000053094	MGI:1918917	protein coding gene	transmembrane protein 248
5	gene	130.22045	130.22306	negative	MGI_C57BL6J_3646314	Gm6598	NCBI_Gene:625540,ENSEMBL:ENSMUSG00000107143	MGI:3646314	lncRNA gene	predicted gene 6598
5	gene	130.22622	130.22766	positive	MGI_C57BL6J_5662604	Gm42467	ENSEMBL:ENSMUSG00000106751	MGI:5662604	unclassified gene	predicted gene 42467
5	gene	130.24573	130.25553	negative	MGI_C57BL6J_1913961	Sbds	NCBI_Gene:66711,ENSEMBL:ENSMUSG00000025337	MGI:1913961	protein coding gene	SBDS ribosome maturation factor
5	gene	130.25557	130.34157	positive	MGI_C57BL6J_2141161	Tyw1	NCBI_Gene:100929,ENSEMBL:ENSMUSG00000056310	MGI:2141161	protein coding gene	tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
5	gene	130.36936	130.84741	positive	MGI_C57BL6J_2155987	Caln1	NCBI_Gene:140904,ENSEMBL:ENSMUSG00000060371	MGI:2155987	protein coding gene	calneuron 1
5	gene	130.37215	130.37851	negative	MGI_C57BL6J_5623221	Gm40336	NCBI_Gene:105244786	MGI:5623221	lncRNA gene	predicted gene, 40336
5	gene	130.37878	130.38463	negative	MGI_C57BL6J_2685897	A330070K13Rik	NCBI_Gene:381673,ENSEMBL:ENSMUSG00000052014	MGI:2685897	protein coding gene	RIKEN cDNA A330070K13 gene
5	gene	130.61812	130.61855	negative	MGI_C57BL6J_5663555	Gm43418	ENSEMBL:ENSMUSG00000106849	MGI:5663555	unclassified gene	predicted gene 43418
5	gene	130.78270	130.78280	positive	MGI_C57BL6J_5453538	Gm23761	ENSEMBL:ENSMUSG00000088972	MGI:5453538	snRNA gene	predicted gene, 23761
5	gene	130.84451	130.84489	positive	MGI_C57BL6J_1924583	C030007I01Rik	NA	NA	unclassified gene	RIKEN cDNA C030007I01 gene
5	gene	130.85413	130.85524	negative	MGI_C57BL6J_5623222	Gm40337	NCBI_Gene:105244787	MGI:5623222	lncRNA gene	predicted gene, 40337
5	gene	130.86445	130.86784	negative	MGI_C57BL6J_5663031	Gm42894	ENSEMBL:ENSMUSG00000106694	MGI:5663031	unclassified gene	predicted gene 42894
5	gene	130.87208	131.30850	negative	MGI_C57BL6J_2137594	Galnt17	NCBI_Gene:212996,ENSEMBL:ENSMUSG00000034040	MGI:2137594	protein coding gene	polypeptide N-acetylgalactosaminyltransferase 17
5	gene	130.89650	130.89861	negative	MGI_C57BL6J_5663034	Gm42897	ENSEMBL:ENSMUSG00000107207	MGI:5663034	unclassified gene	predicted gene 42897
5	gene	130.95892	130.96004	negative	MGI_C57BL6J_5663033	Gm42896	ENSEMBL:ENSMUSG00000107295	MGI:5663033	unclassified gene	predicted gene 42896
5	gene	131.04134	131.04297	negative	MGI_C57BL6J_5663302	Gm43165	ENSEMBL:ENSMUSG00000106729	MGI:5663302	unclassified gene	predicted gene 43165
5	gene	131.08468	131.08881	positive	MGI_C57BL6J_5623223	Gm40338	NCBI_Gene:105244788	MGI:5623223	lncRNA gene	predicted gene, 40338
5	gene	131.13002	131.13471	negative	MGI_C57BL6J_5663303	Gm43166	ENSEMBL:ENSMUSG00000106710	MGI:5663303	lncRNA gene	predicted gene 43166
5	gene	131.39160	131.41477	negative	MGI_C57BL6J_5588840	Gm29681	NCBI_Gene:545809,ENSEMBL:ENSMUSG00000105387	MGI:5588840	lncRNA gene	predicted gene, 29681
5	gene	131.43733	132.54334	negative	MGI_C57BL6J_1919847	Auts2	NCBI_Gene:319974,ENSEMBL:ENSMUSG00000029673	MGI:1919847	protein coding gene	autism susceptibility candidate 2
5	gene	131.48620	131.48848	negative	MGI_C57BL6J_5012567	Gm20382	NA	NA	unclassified gene	predicted gene%2c 20382
5	gene	131.52495	131.52566	negative	MGI_C57BL6J_1924168	3110001N23Rik	NA	NA	unclassified gene	RIKEN cDNA 3110001N23 gene
5	gene	131.57799	131.57811	positive	MGI_C57BL6J_5530648	Gm27266	ENSEMBL:ENSMUSG00000099255	MGI:5530648	rRNA gene	predicted gene, 27266
5	gene	131.59381	131.59491	negative	MGI_C57BL6J_1924496	9330177L23Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 9330177L23 gene
5	gene	131.60365	131.60540	negative	MGI_C57BL6J_5662726	Gm42589	ENSEMBL:ENSMUSG00000105470	MGI:5662726	unclassified gene	predicted gene 42589
5	gene	131.60830	131.60959	negative	MGI_C57BL6J_5662725	Gm42588	ENSEMBL:ENSMUSG00000105584	MGI:5662725	unclassified gene	predicted gene 42588
5	gene	131.61544	131.62509	positive	MGI_C57BL6J_1917213	2810432F15Rik	ENSEMBL:ENSMUSG00000104987	MGI:1917213	lncRNA gene	RIKEN cDNA 2810432F15 gene
5	gene	131.62484	131.62554	negative	MGI_C57BL6J_5662728	Gm42591	ENSEMBL:ENSMUSG00000105500	MGI:5662728	unclassified gene	predicted gene 42591
5	gene	131.63995	131.64281	negative	MGI_C57BL6J_5663620	Gm43483	ENSEMBL:ENSMUSG00000105289	MGI:5663620	unclassified gene	predicted gene 43483
5	gene	131.69472	131.69588	negative	MGI_C57BL6J_5662580	Gm42443	ENSEMBL:ENSMUSG00000105726	MGI:5662580	unclassified gene	predicted gene 42443
5	gene	131.69722	131.69835	negative	MGI_C57BL6J_5662579	Gm42442	ENSEMBL:ENSMUSG00000106557	MGI:5662579	unclassified gene	predicted gene 42442
5	gene	131.88027	131.88377	positive	MGI_C57BL6J_1922619	4930563F08Rik	NCBI_Gene:75369,ENSEMBL:ENSMUSG00000105773	MGI:1922619	lncRNA gene	RIKEN cDNA 4930563F08 gene
5	gene	131.88297	131.88594	negative	MGI_C57BL6J_2444463	C230071H17Rik	ENSEMBL:ENSMUSG00000106570	MGI:2444463	unclassified gene	RIKEN cDNA C230071H17 gene
5	gene	131.90570	131.90644	negative	MGI_C57BL6J_5662578	Gm42441	ENSEMBL:ENSMUSG00000106516	MGI:5662578	unclassified gene	predicted gene 42441
5	gene	131.93240	131.93468	negative	MGI_C57BL6J_5662577	Gm42440	ENSEMBL:ENSMUSG00000105720	MGI:5662577	unclassified gene	predicted gene 42440
5	gene	131.95499	131.96501	positive	MGI_C57BL6J_5662576	Gm42439	ENSEMBL:ENSMUSG00000106395	MGI:5662576	lncRNA gene	predicted gene 42439
5	gene	131.95759	131.95856	negative	MGI_C57BL6J_5662575	Gm42438	ENSEMBL:ENSMUSG00000106356	MGI:5662575	unclassified gene	predicted gene 42438
5	gene	131.97205	131.97589	negative	MGI_C57BL6J_5663128	Gm42991	ENSEMBL:ENSMUSG00000106386	MGI:5663128	unclassified gene	predicted gene 42991
5	gene	131.98655	131.99338	negative	MGI_C57BL6J_5663129	Gm42992	ENSEMBL:ENSMUSG00000106320	MGI:5663129	unclassified gene	predicted gene 42992
5	gene	131.99618	131.99841	negative	MGI_C57BL6J_1919710	2610011E03Rik	ENSEMBL:ENSMUSG00000104936	MGI:1919710	unclassified gene	RIKEN cDNA 2610011E03 gene
5	gene	132.01561	132.02293	negative	MGI_C57BL6J_5663130	Gm42993	ENSEMBL:ENSMUSG00000105985	MGI:5663130	unclassified gene	predicted gene 42993
5	gene	132.20184	132.20317	negative	MGI_C57BL6J_5663132	Gm42995	ENSEMBL:ENSMUSG00000105495	MGI:5663132	unclassified gene	predicted gene 42995
5	gene	132.20507	132.20670	negative	MGI_C57BL6J_5663133	Gm42996	ENSEMBL:ENSMUSG00000106045	MGI:5663133	unclassified gene	predicted gene 42996
5	gene	132.37038	132.37268	negative	MGI_C57BL6J_5663126	Gm42989	ENSEMBL:ENSMUSG00000104994	MGI:5663126	unclassified gene	predicted gene 42989
5	gene	132.43457	132.43743	negative	MGI_C57BL6J_5663156	Gm43019	ENSEMBL:ENSMUSG00000106049	MGI:5663156	unclassified gene	predicted gene 43019
5	gene	132.43926	132.44053	negative	MGI_C57BL6J_5663155	Gm43018	ENSEMBL:ENSMUSG00000106450	MGI:5663155	unclassified gene	predicted gene 43018
5	gene	132.49034	132.49274	negative	MGI_C57BL6J_5663324	Gm43187	ENSEMBL:ENSMUSG00000105624	MGI:5663324	unclassified gene	predicted gene 43187
5	gene	132.49768	132.49984	negative	MGI_C57BL6J_5663325	Gm43188	ENSEMBL:ENSMUSG00000106384	MGI:5663325	unclassified gene	predicted gene 43188
5	gene	132.53442	132.53525	negative	MGI_C57BL6J_5663323	Gm43186	ENSEMBL:ENSMUSG00000105598	MGI:5663323	unclassified gene	predicted gene 43186
5	gene	132.54443	132.54559	positive	MGI_C57BL6J_5579322	Gm28616	ENSEMBL:ENSMUSG00000100420	MGI:5579322	lncRNA gene	predicted gene 28616
5	gene	132.54606	132.55063	positive	MGI_C57BL6J_5662763	Gm42626	ENSEMBL:ENSMUSG00000105809	MGI:5662763	lncRNA gene	predicted gene 42626
5	gene	132.75063	132.75647	negative	MGI_C57BL6J_5595687	Gm36528	NCBI_Gene:102640478	MGI:5595687	lncRNA gene	predicted gene, 36528
5	gene	132.79615	132.79644	positive	MGI_C57BL6J_5611601	Gm38373	ENSEMBL:ENSMUSG00000103500	MGI:5611601	unclassified gene	predicted gene, 38373
5	gene	132.80168	132.80196	positive	MGI_C57BL6J_5455499	Gm25722	ENSEMBL:ENSMUSG00000088123	MGI:5455499	unclassified non-coding RNA gene	predicted gene, 25722
5	gene	133.44334	133.44426	positive	MGI_C57BL6J_5662762	Gm42625	ENSEMBL:ENSMUSG00000106097	MGI:5662762	unclassified gene	predicted gene 42625
5	pseudogene	133.47509	133.47558	positive	MGI_C57BL6J_3641791	Gm10051	NCBI_Gene:100039731,ENSEMBL:ENSMUSG00000058905	MGI:3641791	pseudogene	predicted pseudogene 10051
5	pseudogene	133.51975	133.52072	positive	MGI_C57BL6J_5010164	Gm17979	NCBI_Gene:100416223,ENSEMBL:ENSMUSG00000106172	MGI:5010164	pseudogene	predicted gene, 17979
5	gene	133.53452	133.59843	negative	MGI_C57BL6J_5595826	Gm36667	NCBI_Gene:102640653,ENSEMBL:ENSMUSG00000105227	MGI:5595826	lncRNA gene	predicted gene, 36667
5	pseudogene	133.84156	133.84266	negative	MGI_C57BL6J_3645041	Gm7902	NCBI_Gene:666038,ENSEMBL:ENSMUSG00000106067	MGI:3645041	pseudogene	predicted gene 7902
5	pseudogene	133.91916	133.92000	negative	MGI_C57BL6J_3780572	Gm2404	NCBI_Gene:100039750,ENSEMBL:ENSMUSG00000104893	MGI:3780572	pseudogene	predicted gene 2404
5	gene	134.04583	134.08953	negative	MGI_C57BL6J_5623224	Gm40339	NCBI_Gene:105244789	MGI:5623224	lncRNA gene	predicted gene, 40339
5	gene	134.05079	134.05432	positive	MGI_C57BL6J_5623225	Gm40340	NCBI_Gene:105244790	MGI:5623225	lncRNA gene	predicted gene, 40340
5	gene	134.09049	134.09145	negative	MGI_C57BL6J_1917266	1700030N18Rik	ENSEMBL:ENSMUSG00000106800	MGI:1917266	unclassified gene	RIKEN cDNA 1700030N18 gene
5	gene	134.09841	134.09961	negative	MGI_C57BL6J_3783071	Gm15627	NCBI_Gene:102640952,ENSEMBL:ENSMUSG00000087344	MGI:3783071	lncRNA gene	predicted gene 15627
5	gene	134.09971	134.14434	positive	MGI_C57BL6J_1933384	Castor2	NCBI_Gene:80909,ENSEMBL:ENSMUSG00000015944	MGI:1933384	protein coding gene	cytosolic arginine sensor for mTORC1 subunit 2
5	gene	134.14805	134.17695	negative	MGI_C57BL6J_2137600	Rcc1l	NCBI_Gene:94254,ENSEMBL:ENSMUSG00000061979	MGI:2137600	protein coding gene	reculator of chromosome condensation 1 like
5	gene	134.17635	134.17771	positive	MGI_C57BL6J_3704260	B230377A18Rik	ENSEMBL:ENSMUSG00000104195	MGI:3704260	unclassified gene	RIKEN cDNA B230377A18 gene
5	gene	134.18402	134.22436	positive	MGI_C57BL6J_2149780	Gtf2ird2	NCBI_Gene:114674,ENSEMBL:ENSMUSG00000015942	MGI:2149780	protein coding gene	GTF2I repeat domain containing 2
5	gene	134.20447	134.20476	positive	MGI_C57BL6J_5453916	Gm24139	ENSEMBL:ENSMUSG00000084729	MGI:5453916	unclassified non-coding RNA gene	predicted gene, 24139
5	gene	134.22005	134.22962	negative	MGI_C57BL6J_97283	Ncf1	NCBI_Gene:17969,ENSEMBL:ENSMUSG00000015950	MGI:97283	protein coding gene	neutrophil cytosolic factor 1
5	gene	134.23783	134.31476	negative	MGI_C57BL6J_1202722	Gtf2i	NCBI_Gene:14886,ENSEMBL:ENSMUSG00000060261	MGI:1202722	protein coding gene	general transcription factor II I
5	gene	134.26707	134.27074	negative	MGI_C57BL6J_5663618	Gm43481	ENSEMBL:ENSMUSG00000107000	MGI:5663618	unclassified gene	predicted gene 43481
5	gene	134.29880	134.29921	negative	MGI_C57BL6J_5663617	Gm43480	ENSEMBL:ENSMUSG00000107076	MGI:5663617	lncRNA gene	predicted gene 43480
5	gene	134.32228	134.32497	positive	MGI_C57BL6J_5826561	Gm46924	NCBI_Gene:108169074	MGI:5826561	lncRNA gene	predicted gene, 46924
5	gene	134.32645	134.32652	positive	MGI_C57BL6J_4950404	Mir3965	miRBase:MI0016972,NCBI_Gene:100628570,ENSEMBL:ENSMUSG00000093311	MGI:4950404	miRNA gene	microRNA 3965
5	gene	134.34850	134.34985	positive	MGI_C57BL6J_5826562	Gm46925	NCBI_Gene:108169075	MGI:5826562	lncRNA gene	predicted gene, 46925
5	pseudogene	134.35328	134.35520	positive	MGI_C57BL6J_3779651	Gm7033	NCBI_Gene:630424	MGI:3779651	pseudogene	predicted gene 7033
5	gene	134.35766	134.45672	negative	MGI_C57BL6J_1861942	Gtf2ird1	NCBI_Gene:57080,ENSEMBL:ENSMUSG00000023079	MGI:1861942	protein coding gene	general transcription factor II I repeat domain-containing 1
5	gene	134.41624	134.41635	positive	MGI_C57BL6J_4422043	n-R5s178	ENSEMBL:ENSMUSG00000077437	MGI:4422043	rRNA gene	nuclear encoded rRNA 5S 178
5	gene	134.44857	134.44867	positive	MGI_C57BL6J_5456117	Gm26340	ENSEMBL:ENSMUSG00000076320	MGI:5456117	miRNA gene	predicted gene, 26340
5	gene	134.45599	134.45803	positive	MGI_C57BL6J_5663019	Gm42882	ENSEMBL:ENSMUSG00000106969	MGI:5663019	lncRNA gene	predicted gene 42882
5	pseudogene	134.46322	134.46354	positive	MGI_C57BL6J_3801865	Gm16020	NCBI_Gene:100039820,ENSEMBL:ENSMUSG00000072576	MGI:3801865	pseudogene	predicted gene 16020
5	gene	134.48123	134.48545	negative	MGI_C57BL6J_5663022	Gm42885	ENSEMBL:ENSMUSG00000106802	MGI:5663022	unclassified gene	predicted gene 42885
5	gene	134.48938	134.55247	negative	MGI_C57BL6J_1313136	Clip2	NCBI_Gene:269713,ENSEMBL:ENSMUSG00000063146	MGI:1313136	protein coding gene	CAP-GLY domain containing linker protein 2
5	gene	134.51933	134.52079	negative	MGI_C57BL6J_1924056	2700029L08Rik	ENSEMBL:ENSMUSG00000106691	MGI:1924056	unclassified gene	RIKEN cDNA 2700029L08 gene
5	gene	134.55206	134.55849	positive	MGI_C57BL6J_5663021	Gm42884	ENSEMBL:ENSMUSG00000107090	MGI:5663021	lncRNA gene	predicted gene 42884
5	gene	134.55725	134.57708	negative	MGI_C57BL6J_2684898	Syna	NCBI_Gene:214292,ENSEMBL:ENSMUSG00000085957	MGI:2684898	protein coding gene	syncytin a
5	gene	134.57208	134.57211	positive	MGI_C57BL6J_5562767	Mir7228	miRBase:MI0023723,NCBI_Gene:102465708,ENSEMBL:ENSMUSG00000106323	MGI:5562767	miRNA gene	microRNA 7228
5	gene	134.58137	134.60181	positive	MGI_C57BL6J_1341868	Rfc2	NCBI_Gene:19718,ENSEMBL:ENSMUSG00000023104	MGI:1341868	protein coding gene	replication factor C (activator 1) 2
5	gene	134.60002	134.61978	negative	MGI_C57BL6J_1926479	Lat2	NCBI_Gene:56743,ENSEMBL:ENSMUSG00000040751	MGI:1926479	protein coding gene	linker for activation of T cells family, member 2
5	gene	134.61972	134.63949	negative	MGI_C57BL6J_1341822	Eif4h	NCBI_Gene:22384,ENSEMBL:ENSMUSG00000040731	MGI:1341822	protein coding gene	eukaryotic translation initiation factor 4H
5	gene	134.65604	134.68866	negative	MGI_C57BL6J_104572	Limk1	NCBI_Gene:16885,ENSEMBL:ENSMUSG00000029674	MGI:104572	protein coding gene	LIM-domain containing, protein kinase
5	gene	134.67437	134.68015	positive	MGI_C57BL6J_3642774	Gm10369	NCBI_Gene:100038504,ENSEMBL:ENSMUSG00000072573	MGI:3642774	lncRNA gene	predicted gene 10369
5	gene	134.70259	134.74737	negative	MGI_C57BL6J_95317	Eln	NCBI_Gene:13717,ENSEMBL:ENSMUSG00000029675	MGI:95317	protein coding gene	elastin
5	gene	134.74704	134.82297	positive	MGI_C57BL6J_5589162	Gm30003	NCBI_Gene:102631739,ENSEMBL:ENSMUSG00000107318	MGI:5589162	lncRNA gene	predicted gene, 30003
5	gene	134.90159	134.90673	negative	MGI_C57BL6J_1923879	Tmem270	NCBI_Gene:76629,ENSEMBL:ENSMUSG00000040576	MGI:1923879	protein coding gene	transmembrane protein 270
5	gene	134.91425	134.91553	negative	MGI_C57BL6J_1913102	Cldn13	NCBI_Gene:57255,ENSEMBL:ENSMUSG00000008843	MGI:1913102	protein coding gene	claudin 13
5	pseudogene	134.91975	134.92035	negative	MGI_C57BL6J_6324743	Gm50473	ENSEMBL:ENSMUSG00000118424	MGI:6324743	pseudogene	predicted gene, 50473
5	gene	134.91979	134.92064	positive	MGI_C57BL6J_1918536	4933439J24Rik	ENSEMBL:ENSMUSG00000107322	MGI:1918536	lncRNA gene	RIKEN cDNA 4933439J24 gene
5	pseudogene	134.92426	134.92487	negative	MGI_C57BL6J_6324744	Gm50474	ENSEMBL:ENSMUSG00000118469	MGI:6324744	pseudogene	predicted gene, 50474
5	gene	134.92985	134.93239	negative	MGI_C57BL6J_1918776	9030607J07Rik	NCBI_Gene:105244793,ENSEMBL:ENSMUSG00000107005	MGI:1918776	lncRNA gene	RIKEN cDNA 9030607J07 gene
5	gene	134.93233	134.94264	positive	MGI_C57BL6J_1933146	Mettl27	NCBI_Gene:79565,ENSEMBL:ENSMUSG00000040557	MGI:1933146	protein coding gene	methyltransferase like 27
5	gene	134.94512	134.94693	negative	MGI_C57BL6J_1313314	Cldn4	NCBI_Gene:12740,ENSEMBL:ENSMUSG00000047501	MGI:1313314	protein coding gene	claudin 4
5	gene	134.98621	134.98748	positive	MGI_C57BL6J_1329044	Cldn3	NCBI_Gene:12739,ENSEMBL:ENSMUSG00000070473	MGI:1329044	protein coding gene	claudin 3
5	gene	134.98743	135.00135	negative	MGI_C57BL6J_1918554	Wbscr25	NCBI_Gene:71304,ENSEMBL:ENSMUSG00000054909	MGI:1918554	antisense lncRNA gene	Williams Beuren syndrome chromosome region 25 (human)
5	pseudogene	135.00658	135.00675	positive	MGI_C57BL6J_3783200	Rps29-ps	ENSEMBL:ENSMUSG00000084392	MGI:3783200	pseudogene	ribosomal protein S29, pseudogene
5	gene	135.00709	135.01011	negative	MGI_C57BL6J_5663509	Gm43372	ENSEMBL:ENSMUSG00000107335	MGI:5663509	unclassified gene	predicted gene 43372
5	gene	135.00915	135.01218	positive	MGI_C57BL6J_1916008	Abhd11	NCBI_Gene:68758,ENSEMBL:ENSMUSG00000040532	MGI:1916008	protein coding gene	abhydrolase domain containing 11
5	gene	135.01211	135.01325	negative	MGI_C57BL6J_1917062	Abhd11os	NCBI_Gene:69812,ENSEMBL:ENSMUSG00000085042	MGI:1917062	antisense lncRNA gene	abhydrolase domain containing 11, opposite strand
5	gene	135.02348	135.05110	positive	MGI_C57BL6J_109355	Stx1a	NCBI_Gene:20907,ENSEMBL:ENSMUSG00000007207	MGI:109355	protein coding gene	syntaxin 1A (brain)
5	gene	135.05296	135.06496	negative	MGI_C57BL6J_1913388	Bud23	NCBI_Gene:66138,ENSEMBL:ENSMUSG00000005378	MGI:1913388	protein coding gene	BUD23, rRNA methyltransferase and ribosome maturation factor
5	gene	135.05399	135.05412	negative	MGI_C57BL6J_5455269	Gm25492	ENSEMBL:ENSMUSG00000088008	MGI:5455269	snoRNA gene	predicted gene, 25492
5	gene	135.06420	135.06586	positive	MGI_C57BL6J_1913364	Dnajc30	NCBI_Gene:66114,ENSEMBL:ENSMUSG00000061118	MGI:1913364	protein coding gene	DnaJ heat shock protein family (Hsp40) member C30
5	gene	135.07290	135.07827	negative	MGI_C57BL6J_2159402	Vps37d	NCBI_Gene:194309,ENSEMBL:ENSMUSG00000043614	MGI:2159402	protein coding gene	vacuolar protein sorting 37D
5	gene	135.08989	135.13838	positive	MGI_C57BL6J_1927999	Mlxipl	NCBI_Gene:58805,ENSEMBL:ENSMUSG00000005373	MGI:1927999	protein coding gene	MLX interacting protein-like
5	gene	135.12241	135.12329	negative	MGI_C57BL6J_5663637	Gm43500	ENSEMBL:ENSMUSG00000107296	MGI:5663637	lncRNA gene	predicted gene 43500
5	gene	135.14942	135.16576	positive	MGI_C57BL6J_1351652	Tbl2	NCBI_Gene:27368,ENSEMBL:ENSMUSG00000005374	MGI:1351652	protein coding gene	transducin (beta)-like 2
5	gene	135.16828	135.18186	positive	MGI_C57BL6J_1332238	Bcl7b	NCBI_Gene:12054,ENSEMBL:ENSMUSG00000029681	MGI:1332238	protein coding gene	B cell CLL/lymphoma 7B
5	gene	135.18726	135.24613	positive	MGI_C57BL6J_1353499	Baz1b	NCBI_Gene:22385,ENSEMBL:ENSMUSG00000002748	MGI:1353499	protein coding gene	bromodomain adjacent to zinc finger domain, 1B
5	gene	135.20799	135.20811	positive	MGI_C57BL6J_5455092	Gm25315	ENSEMBL:ENSMUSG00000080473	MGI:5455092	miRNA gene	predicted gene, 25315
5	gene	135.24894	135.25123	negative	MGI_C57BL6J_1313278	Fzd9	NCBI_Gene:14371,ENSEMBL:ENSMUSG00000049551	MGI:1313278	protein coding gene	frizzled class receptor 9
5	gene	135.26433	135.26513	positive	MGI_C57BL6J_1924520	9430007M09Rik	ENSEMBL:ENSMUSG00000106913	MGI:1924520	unclassified gene	RIKEN cDNA 9430007M09 gene
5	gene	135.29170	135.35181	negative	MGI_C57BL6J_2137612	Fkbp6	NCBI_Gene:94244,ENSEMBL:ENSMUSG00000040013	MGI:2137612	protein coding gene	FK506 binding protein 6
5	gene	135.35187	135.36801	positive	MGI_C57BL6J_2664992	Trim50	NCBI_Gene:215061,ENSEMBL:ENSMUSG00000053388	MGI:2664992	protein coding gene	tripartite motif-containing 50
5	gene	135.36993	135.37680	positive	MGI_C57BL6J_2140844	Nsun5	NCBI_Gene:100609,ENSEMBL:ENSMUSG00000000916	MGI:2140844	protein coding gene	NOL1/NOP2/Sun domain family, member 5
5	gene	135.37614	135.40473	negative	MGI_C57BL6J_2137624	Pom121	NCBI_Gene:107939,ENSEMBL:ENSMUSG00000053293	MGI:2137624	protein coding gene	nuclear pore membrane protein 121
5	gene	135.38373	135.38381	negative	MGI_C57BL6J_5531069	Mir7033	miRBase:MI0022882,NCBI_Gene:102466217,ENSEMBL:ENSMUSG00000099212	MGI:5531069	miRNA gene	microRNA 7033
5	gene	135.40652	135.54532	negative	MGI_C57BL6J_1099804	Hip1	NCBI_Gene:215114,ENSEMBL:ENSMUSG00000039959	MGI:1099804	protein coding gene	huntingtin interacting protein 1
5	gene	135.47178	135.47342	negative	MGI_C57BL6J_5662868	Gm42731	ENSEMBL:ENSMUSG00000106758	MGI:5662868	unclassified gene	predicted gene 42731
5	gene	135.56045	135.56357	negative	MGI_C57BL6J_3589281	Ccl26	NCBI_Gene:541307,ENSEMBL:ENSMUSG00000070464	MGI:3589281	protein coding gene	chemokine (C-C motif) ligand 26
5	gene	135.56994	135.57312	negative	MGI_C57BL6J_1928953	Ccl24	NCBI_Gene:56221,ENSEMBL:ENSMUSG00000004814	MGI:1928953	protein coding gene	chemokine (C-C motif) ligand 24
5	gene	135.61383	135.61730	negative	MGI_C57BL6J_5663260	Gm43123	ENSEMBL:ENSMUSG00000107029	MGI:5663260	unclassified gene	predicted gene 43123
5	gene	135.63262	135.64645	positive	MGI_C57BL6J_1915612	Rhbdd2	NCBI_Gene:215160,ENSEMBL:ENSMUSG00000039917	MGI:1915612	protein coding gene	rhomboid domain containing 2
5	pseudogene	135.63714	135.63750	negative	MGI_C57BL6J_3783054	Gm15607	NCBI_Gene:100502746,ENSEMBL:ENSMUSG00000082001	MGI:3783054	pseudogene	predicted gene 15607
5	pseudogene	135.64396	135.64434	negative	MGI_C57BL6J_5434003	Gm21839	ENSEMBL:ENSMUSG00000094372	MGI:5434003	pseudogene	predicted gene, 21839
5	gene	135.65381	135.67299	negative	MGI_C57BL6J_5663228	Gm43091	ENSEMBL:ENSMUSG00000105239	MGI:5663228	lncRNA gene	predicted gene 43091
5	gene	135.67003	135.73533	positive	MGI_C57BL6J_97744	Por	NCBI_Gene:18984,ENSEMBL:ENSMUSG00000005514	MGI:97744	protein coding gene	P450 (cytochrome) oxidoreductase
5	gene	135.68594	135.68777	negative	MGI_C57BL6J_5623230	Gm40345	NCBI_Gene:105244797	MGI:5623230	lncRNA gene	predicted gene, 40345
5	pseudogene	135.69752	135.70018	negative	MGI_C57BL6J_3801920	Gm16061	NCBI_Gene:102641305,ENSEMBL:ENSMUSG00000080972	MGI:3801920	pseudogene	predicted gene 16061
5	gene	135.73549	135.74445	negative	MGI_C57BL6J_2686991	Tmem120a	NCBI_Gene:215210,ENSEMBL:ENSMUSG00000039886	MGI:2686991	protein coding gene	transmembrane protein 120A
5	gene	135.73581	135.73589	negative	MGI_C57BL6J_5530754	Mir7034	miRBase:MI0022883,NCBI_Gene:102466791,ENSEMBL:ENSMUSG00000099197	MGI:5530754	miRNA gene	microRNA 7034
5	gene	135.74722	135.77841	negative	MGI_C57BL6J_1923821	Styxl1	NCBI_Gene:76571,ENSEMBL:ENSMUSG00000019178	MGI:1923821	protein coding gene	serine/threonine/tyrosine interacting-like 1
5	gene	135.77280	135.77798	positive	MGI_C57BL6J_5589364	Gm30205	NCBI_Gene:105244798	MGI:5589364	lncRNA gene	predicted gene, 30205
5	gene	135.77848	135.79040	positive	MGI_C57BL6J_97050	Mdh2	NCBI_Gene:17448,ENSEMBL:ENSMUSG00000019179	MGI:97050	protein coding gene	malate dehydrogenase 2, NAD (mitochondrial)
5	gene	135.80686	135.87477	positive	MGI_C57BL6J_1920309	Srrm3	NCBI_Gene:58212,ENSEMBL:ENSMUSG00000039860	MGI:1920309	protein coding gene	serine/arginine repetitive matrix 3
5	gene	135.83730	135.83737	negative	MGI_C57BL6J_5453045	Gm23268	ENSEMBL:ENSMUSG00000094486	MGI:5453045	miRNA gene	predicted gene, 23268
5	gene	135.84306	135.84495	negative	MGI_C57BL6J_1918907	Srrm3os	ENSEMBL:ENSMUSG00000085026	MGI:1918907	antisense lncRNA gene	serine/arginine repetitive matrix 3, opposite strand
5	gene	135.85810	135.86025	positive	MGI_C57BL6J_5011544	Gm19359	NA	NA	unclassified gene	predicted gene%2c 19359
5	gene	135.87566	135.87576	positive	MGI_C57BL6J_5452227	Gm22450	ENSEMBL:ENSMUSG00000095502	MGI:5452227	snRNA gene	predicted gene, 22450
5	gene	135.88792	135.88956	positive	MGI_C57BL6J_96240	Hspb1	NCBI_Gene:15507,ENSEMBL:ENSMUSG00000004951	MGI:96240	protein coding gene	heat shock protein 1
5	pseudogene	135.89633	135.89649	negative	MGI_C57BL6J_5662670	Gm42533	ENSEMBL:ENSMUSG00000105047	MGI:5662670	pseudogene	predicted gene 42533
5	gene	135.90838	135.93464	negative	MGI_C57BL6J_108109	Ywhag	NCBI_Gene:22628,ENSEMBL:ENSMUSG00000051391	MGI:108109	protein coding gene	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
5	gene	135.93067	135.93432	negative	MGI_C57BL6J_5623231	Gm40346	NCBI_Gene:105244799	MGI:5623231	lncRNA gene	predicted gene, 40346
5	gene	135.96021	135.97454	negative	MGI_C57BL6J_1924709	Ssc4d	NCBI_Gene:109267,ENSEMBL:ENSMUSG00000029699	MGI:1924709	protein coding gene	scavenger receptor cysteine rich family, 4 domains
5	gene	135.98010	135.98862	positive	MGI_C57BL6J_99215	Zp3	NCBI_Gene:22788,ENSEMBL:ENSMUSG00000004948	MGI:99215	protein coding gene	zona pellucida glycoprotein 3
5	gene	135.99480	136.03288	positive	MGI_C57BL6J_1921448	Dtx2	NCBI_Gene:74198,ENSEMBL:ENSMUSG00000004947	MGI:1921448	protein coding gene	deltex 2, E3 ubiquitin ligase
5	gene	136.03850	136.04649	positive	MGI_C57BL6J_2140882	Upk3b	NCBI_Gene:100647,ENSEMBL:ENSMUSG00000042985	MGI:2140882	protein coding gene	uroplakin 3B
5	gene	136.05449	136.07670	positive	MGI_C57BL6J_1916915	Upk3bl	NCBI_Gene:69665,ENSEMBL:ENSMUSG00000006143	MGI:1916915	protein coding gene	uroplakin 3B-like
5	gene	136.07249	136.07480	negative	MGI_C57BL6J_5623232	Gm40347	NCBI_Gene:105244800	MGI:5623232	lncRNA gene	predicted gene, 40347
5	gene	136.08392	136.11186	positive	MGI_C57BL6J_1858600	Rasa4	NCBI_Gene:54153,ENSEMBL:ENSMUSG00000004952	MGI:1858600	protein coding gene	RAS p21 protein activator 4
5	gene	136.09626	136.09643	negative	MGI_C57BL6J_5451991	Gm22214	ENSEMBL:ENSMUSG00000088188	MGI:5451991	snRNA gene	predicted gene, 22214
5	gene	136.10260	136.10444	negative	MGI_C57BL6J_3783141	Gm15701	ENSEMBL:ENSMUSG00000086656	MGI:3783141	lncRNA gene	predicted gene 15701
5	gene	136.10552	136.10560	positive	MGI_C57BL6J_5531043	Mir7035	miRBase:MI0022884,NCBI_Gene:102465626,ENSEMBL:ENSMUSG00000099003	MGI:5531043	miRNA gene	microRNA 7035
5	gene	136.11663	136.12295	positive	MGI_C57BL6J_109582	Polr2j	NCBI_Gene:20022,ENSEMBL:ENSMUSG00000039771	MGI:109582	protein coding gene	polymerase (RNA) II (DNA directed) polypeptide J
5	gene	136.12097	136.12167	negative	MGI_C57BL6J_5663741	Gm43604	ENSEMBL:ENSMUSG00000105349	MGI:5663741	lncRNA gene	predicted gene 43604
5	gene	136.12277	136.13607	negative	MGI_C57BL6J_1918985	Lrwd1	NCBI_Gene:71735,ENSEMBL:ENSMUSG00000029703	MGI:1918985	protein coding gene	leucine-rich repeats and WD repeat domain containing 1
5	gene	136.13608	136.14180	positive	MGI_C57BL6J_1919291	Alkbh4	NCBI_Gene:72041,ENSEMBL:ENSMUSG00000039754	MGI:1919291	protein coding gene	alkB homolog 4, lysine demethylase
5	gene	136.14746	136.17071	negative	MGI_C57BL6J_2443195	Orai2	NCBI_Gene:269717,ENSEMBL:ENSMUSG00000039747	MGI:2443195	protein coding gene	ORAI calcium release-activated calcium modulator 2
5	gene	136.17813	136.19896	negative	MGI_C57BL6J_1914051	Prkrip1	NCBI_Gene:66801,ENSEMBL:ENSMUSG00000039737	MGI:1914051	protein coding gene	Prkr interacting protein 1 (IL11 inducible)
5	pseudogene	136.21097	136.21182	negative	MGI_C57BL6J_3649091	Gm5050	NCBI_Gene:269718,ENSEMBL:ENSMUSG00000106243	MGI:3649091	pseudogene	predicted gene 5050
5	gene	136.21815	136.24661	negative	MGI_C57BL6J_1345171	Sh2b2	NCBI_Gene:23921,ENSEMBL:ENSMUSG00000005057	MGI:1345171	protein coding gene	SH2B adaptor protein 2
5	gene	136.24553	136.25136	positive	MGI_C57BL6J_5589567	Gm30408	NCBI_Gene:102632296	MGI:5589567	lncRNA gene	predicted gene, 30408
5	gene	136.24813	136.56749	negative	MGI_C57BL6J_88568	Cux1	NCBI_Gene:13047,ENSEMBL:ENSMUSG00000029705	MGI:88568	protein coding gene	cut-like homeobox 1
5	gene	136.24814	136.24840	positive	MGI_C57BL6J_5589650	Gm30491	NA	NA	unclassified non-coding RNA gene	predicted gene%2c 30491
5	gene	136.27500	136.41789	positive	MGI_C57BL6J_4439523	Gm16599	NCBI_Gene:105244801,ENSEMBL:ENSMUSG00000086220	MGI:4439523	lncRNA gene	predicted gene, 16599
5	gene	136.34588	136.35023	negative	MGI_C57BL6J_2444994	A430110C17Rik	ENSEMBL:ENSMUSG00000102415	MGI:2444994	unclassified gene	RIKEN cDNA A430110C17 gene
5	gene	136.37572	136.37580	negative	MGI_C57BL6J_3624349	Mir721	miRBase:MI0004708,NCBI_Gene:723975,ENSEMBL:ENSMUSG00000106479	MGI:3624349	miRNA gene	microRNA 721
5	gene	136.52960	136.53648	negative	MGI_C57BL6J_5611310	Gm38082	ENSEMBL:ENSMUSG00000104369	MGI:5611310	unclassified gene	predicted gene, 38082
5	gene	136.54230	136.54406	negative	MGI_C57BL6J_1917548	2600010L24Rik	NA	NA	unclassified gene	RIKEN cDNA 2600010L24 gene
5	gene	136.61370	136.61533	negative	MGI_C57BL6J_1921826	4731417B20Rik	NA	NA	unclassified gene	RIKEN cDNA 4731417B20 gene
5	gene	136.63233	136.67542	positive	MGI_C57BL6J_5621607	Gm38722	NCBI_Gene:105242534	MGI:5621607	lncRNA gene	predicted gene, 38722
5	gene	136.68889	136.70186	positive	MGI_C57BL6J_1891705	Myl10	NCBI_Gene:59310,ENSEMBL:ENSMUSG00000005474	MGI:1891705	protein coding gene	myosin, light chain 10, regulatory
5	gene	136.74176	136.88338	negative	MGI_C57BL6J_2155345	Col26a1	NCBI_Gene:140709,ENSEMBL:ENSMUSG00000004415	MGI:2155345	protein coding gene	collagen, type XXVI, alpha 1
5	gene	136.82609	136.83467	positive	MGI_C57BL6J_5589813	Gm30654	NCBI_Gene:102632628	MGI:5589813	lncRNA gene	predicted gene, 30654
5	gene	136.86363	136.87037	negative	MGI_C57BL6J_5141950	Gm20485	NCBI_Gene:105242535,ENSEMBL:ENSMUSG00000092402	MGI:5141950	lncRNA gene	predicted gene 20485
5	pseudogene	136.89663	136.89704	positive	MGI_C57BL6J_5663786	Gm43649	NCBI_Gene:108169103,ENSEMBL:ENSMUSG00000104707	MGI:5663786	pseudogene	predicted gene 43649
5	gene	136.90815	136.91540	positive	MGI_C57BL6J_1914536	Ift22	NCBI_Gene:67286,ENSEMBL:ENSMUSG00000007987	MGI:1914536	protein coding gene	intraflagellar transport 22
5	gene	136.91915	136.93711	positive	MGI_C57BL6J_1914002	4933404O12Rik	NCBI_Gene:66752,ENSEMBL:ENSMUSG00000097908	MGI:1914002	lncRNA gene	RIKEN cDNA 4933404O12 gene
5	gene	136.95326	136.96623	positive	MGI_C57BL6J_1913687	Fis1	NCBI_Gene:66437,ENSEMBL:ENSMUSG00000019054	MGI:1913687	protein coding gene	fission, mitochondrial 1
5	gene	136.96662	136.97586	positive	MGI_C57BL6J_1913103	Cldn15	NCBI_Gene:60363,ENSEMBL:ENSMUSG00000001739	MGI:1913103	protein coding gene	claudin 15
5	gene	136.98216	136.98802	negative	MGI_C57BL6J_1917353	Znhit1	NCBI_Gene:70103,ENSEMBL:ENSMUSG00000059518	MGI:1917353	protein coding gene	zinc finger, HIT domain containing 1
5	gene	136.98702	136.99665	positive	MGI_C57BL6J_1347008	Plod3	NCBI_Gene:26433,ENSEMBL:ENSMUSG00000004846	MGI:1347008	protein coding gene	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
5	gene	136.99143	136.99154	positive	MGI_C57BL6J_3629659	Mir702	miRBase:MI0004686,NCBI_Gene:735283,ENSEMBL:ENSMUSG00000076240	MGI:3629659	miRNA gene	microRNA 702
5	pseudogene	136.99739	136.99945	positive	MGI_C57BL6J_3647125	Gm7284	NCBI_Gene:102632711,ENSEMBL:ENSMUSG00000087244	MGI:3647125	pseudogene	predicted gene 7284
5	pseudogene	137.00002	137.00562	positive	MGI_C57BL6J_5504104	Gm26989	NCBI_Gene:100502916,ENSEMBL:ENSMUSG00000098131	MGI:5504104	pseudogene	predicted gene, 26989
5	gene	137.02530	137.03335	positive	MGI_C57BL6J_1343180	Vgf	NCBI_Gene:381677,ENSEMBL:ENSMUSG00000037428	MGI:1343180	protein coding gene	VGF nerve growth factor inducible
5	gene	137.03499	137.04613	negative	MGI_C57BL6J_1098244	Ap1s1	NCBI_Gene:11769,ENSEMBL:ENSMUSG00000004849	MGI:1098244	protein coding gene	adaptor protein complex AP-1, sigma 1
5	gene	137.06150	137.07227	negative	MGI_C57BL6J_97608	Serpine1	NCBI_Gene:18787,ENSEMBL:ENSMUSG00000037411	MGI:97608	protein coding gene	serine (or cysteine) peptidase inhibitor, clade E, member 1
5	gene	137.10564	137.11647	negative	MGI_C57BL6J_2685298	Trim56	NCBI_Gene:384309,ENSEMBL:ENSMUSG00000043279	MGI:2685298	protein coding gene	tripartite motif-containing 56
5	gene	137.13492	137.16605	negative	MGI_C57BL6J_1203527	Muc3	NCBI_Gene:666339,ENSEMBL:ENSMUSG00000037390	MGI:1203527	protein coding gene	mucin 3, intestinal
5	gene	137.15403	137.16607	negative	MGI_C57BL6J_3781232	Gm3054	ENSEMBL:ENSMUSG00000079174	MGI:3781232	lncRNA gene	predicted gene 3054
5	gene	137.16093	137.17266	positive	MGI_C57BL6J_5623233	Gm40348	NCBI_Gene:105244802,ENSEMBL:ENSMUSG00000106466	MGI:5623233	lncRNA gene	predicted gene, 40348
5	gene	137.16689	137.17805	negative	MGI_C57BL6J_5590319	Gm31160	NCBI_Gene:102633301	MGI:5590319	protein coding gene	predicted gene, 31160
5	gene	137.17829	137.18982	negative	MGI_C57BL6J_5623234	Gm40349	NCBI_Gene:105244804	MGI:5623234	protein coding gene	predicted gene, 40349
5	pseudogene	137.18659	137.18917	negative	MGI_C57BL6J_5434124	Gm20768	NCBI_Gene:105244803,ENSEMBL:ENSMUSG00000106190	MGI:5434124	pseudogene	predicted gene, 20768
5	gene	137.20881	137.21239	negative	MGI_C57BL6J_3588263	Muc3a	ENSEMBL:ENSMUSG00000094840	MGI:3588263	protein coding gene	mucin 3A, cell surface associated
5	gene	137.27409	137.28866	negative	MGI_C57BL6J_5662593	Gm42456	ENSEMBL:ENSMUSG00000105736	MGI:5662593	lncRNA gene	predicted gene 42456
5	gene	137.28752	137.29447	positive	MGI_C57BL6J_87876	Ache	NCBI_Gene:11423,ENSEMBL:ENSMUSG00000023328	MGI:87876	protein coding gene	acetylcholinesterase
5	gene	137.29378	137.29388	positive	MGI_C57BL6J_5530867	Mir8116	miRBase:MI0026048,NCBI_Gene:102466887,ENSEMBL:ENSMUSG00000099145	MGI:5530867	miRNA gene	microRNA 8116
5	gene	137.29463	137.29567	positive	MGI_C57BL6J_1917490	Ufsp1	NCBI_Gene:70240,ENSEMBL:ENSMUSG00000051502	MGI:1917490	protein coding gene	UFM1-specific peptidase 1
5	gene	137.29570	137.30771	negative	MGI_C57BL6J_1933527	Srrt	NCBI_Gene:83701,ENSEMBL:ENSMUSG00000037364	MGI:1933527	protein coding gene	serrate RNA effector molecule homolog (Arabidopsis)
5	gene	137.29662	137.29669	negative	MGI_C57BL6J_5531355	Mir7036	miRBase:MI0022885,NCBI_Gene:102465627,ENSEMBL:ENSMUSG00000098624	MGI:5531355	miRNA gene	microRNA 7036
5	pseudogene	137.30940	137.30964	positive	MGI_C57BL6J_5663150	Gm43013	ENSEMBL:ENSMUSG00000106058	MGI:5663150	pseudogene	predicted gene 43013
5	gene	137.30965	137.31450	negative	MGI_C57BL6J_1343458	Trip6	NCBI_Gene:22051,ENSEMBL:ENSMUSG00000023348	MGI:1343458	protein coding gene	thyroid hormone receptor interactor 6
5	gene	137.31456	137.33686	negative	MGI_C57BL6J_1933532	Slc12a9	NCBI_Gene:83704,ENSEMBL:ENSMUSG00000037344	MGI:1933532	protein coding gene	solute carrier family 12 (potassium/chloride transporters), member 9
5	gene	137.33741	137.33835	positive	MGI_C57BL6J_5663149	Gm43012	ENSEMBL:ENSMUSG00000105802	MGI:5663149	unclassified gene	predicted gene 43012
5	gene	137.33741	137.33835	negative	MGI_C57BL6J_5621435	Gm38550	NA	NA	lncRNA gene	predicted gene%2c 38550
5	gene	137.35011	137.37867	positive	MGI_C57BL6J_104757	Ephb4	NCBI_Gene:13846,ENSEMBL:ENSMUSG00000029710	MGI:104757	protein coding gene	Eph receptor B4
5	gene	137.37864	137.47706	negative	MGI_C57BL6J_106656	Zan	NCBI_Gene:22635,ENSEMBL:ENSMUSG00000079173	MGI:106656	protein coding gene	zonadhesin
5	pseudogene	137.43295	137.43332	positive	MGI_C57BL6J_3643602	Rpl36-ps9	NCBI_Gene:665591,ENSEMBL:ENSMUSG00000106476	MGI:3643602	pseudogene	ribosomal protein L36, pseudogene 9
5	gene	137.47804	137.48015	positive	MGI_C57BL6J_5621610	Gm38725	NCBI_Gene:105242540	MGI:5621610	lncRNA gene	predicted gene, 38725
5	gene	137.48289	137.48550	positive	MGI_C57BL6J_5595215	Gm36056	NCBI_Gene:102639836	MGI:5595215	lncRNA gene	predicted gene, 36056
5	gene	137.48302	137.53324	negative	MGI_C57BL6J_95407	Epo	NCBI_Gene:13856,ENSEMBL:ENSMUSG00000029711	MGI:95407	protein coding gene	erythropoietin
5	gene	137.50144	137.50252	negative	MGI_C57BL6J_1921347	Pop7	NCBI_Gene:74097,ENSEMBL:ENSMUSG00000029715	MGI:1921347	protein coding gene	processing of precursor 7, ribonuclease P family, (S. cerevisiae)
5	gene	137.50267	137.50363	positive	MGI_C57BL6J_1924957	9130604C24Rik	ENSEMBL:ENSMUSG00000105851	MGI:1924957	lncRNA gene	RIKEN cDNA 9130604C24 gene
5	gene	137.51025	137.51750	positive	MGI_C57BL6J_3646351	Gm8066	ENSEMBL:ENSMUSG00000106237	MGI:3646351	lncRNA gene	predicted gene 8066
5	gene	137.51026	137.52794	positive	MGI_C57BL6J_1888677	Gigyf1	NCBI_Gene:57330,ENSEMBL:ENSMUSG00000029714	MGI:1888677	protein coding gene	GRB10 interacting GYF protein 1
5	gene	137.52813	137.53351	negative	MGI_C57BL6J_95784	Gnb2	NCBI_Gene:14693,ENSEMBL:ENSMUSG00000029713	MGI:95784	protein coding gene	guanine nucleotide binding protein (G protein), beta 2
5	gene	137.52948	137.52959	negative	MGI_C57BL6J_5531011	Mir6418	miRBase:MI0021956,NCBI_Gene:102465227,ENSEMBL:ENSMUSG00000098597	MGI:5531011	miRNA gene	microRNA 6418
5	gene	137.53242	137.54072	positive	MGI_C57BL6J_4937939	Gm17112	ENSEMBL:ENSMUSG00000090873	MGI:4937939	lncRNA gene	predicted gene 17112
5	gene	137.55352	137.56958	positive	MGI_C57BL6J_1933548	Actl6b	NCBI_Gene:83766,ENSEMBL:ENSMUSG00000029712	MGI:1933548	protein coding gene	actin-like 6B
5	gene	137.56982	137.58808	positive	MGI_C57BL6J_1354956	Tfr2	NCBI_Gene:50765,ENSEMBL:ENSMUSG00000029716	MGI:1354956	protein coding gene	transferrin receptor 2
5	gene	137.59664	137.60108	negative	MGI_C57BL6J_1916179	Mospd3	NCBI_Gene:68929,ENSEMBL:ENSMUSG00000037221	MGI:1916179	protein coding gene	motile sperm domain containing 3
5	pseudogene	137.60122	137.60221	positive	MGI_C57BL6J_3647212	Gm7285	NCBI_Gene:640050,ENSEMBL:ENSMUSG00000105408	MGI:3647212	pseudogene	predicted gene 7285
5	gene	137.60510	137.61378	negative	MGI_C57BL6J_105099	Pcolce	NCBI_Gene:18542,ENSEMBL:ENSMUSG00000029718	MGI:105099	protein coding gene	procollagen C-endopeptidase enhancer protein
5	gene	137.61197	137.61525	positive	MGI_C57BL6J_5595425	Gm36266	NCBI_Gene:108169076,ENSEMBL:ENSMUSG00000106617	MGI:5595425	lncRNA gene	predicted gene, 36266
5	gene	137.61250	137.62900	negative	MGI_C57BL6J_1918426	Fbxo24	NCBI_Gene:71176,ENSEMBL:ENSMUSG00000089984	MGI:1918426	protein coding gene	F-box protein 24
5	pseudogene	137.61561	137.61606	positive	MGI_C57BL6J_3801884	Gm16089	NCBI_Gene:100504640,ENSEMBL:ENSMUSG00000081228	MGI:3801884	pseudogene	predicted gene 16089
5	gene	137.62912	137.64110	positive	MGI_C57BL6J_1917193	Lrch4	NCBI_Gene:231798,ENSEMBL:ENSMUSG00000093445	MGI:1917193	protein coding gene	leucine-rich repeats and calponin homology (CH) domain containing 4
5	gene	137.62912	137.64290	positive	MGI_C57BL6J_5306917	Gm20605	NCBI_Gene:100316903,ENSEMBL:ENSMUSG00000029720	MGI:5306917	protein coding gene	predicted gene 20605
5	gene	137.64133	137.64290	positive	MGI_C57BL6J_3802945	Sap25	NCBI_Gene:751865,ENSEMBL:ENSMUSG00000079165	MGI:3802945	protein coding gene	sin3 associated polypeptide
5	gene	137.64303	137.64571	negative	MGI_C57BL6J_1194882	Irs3	NCBI_Gene:16369,ENSEMBL:ENSMUSG00000047182	MGI:1194882	protein coding gene	insulin receptor substrate 3
5	gene	137.65046	137.68481	negative	MGI_C57BL6J_2443267	Agfg2	NCBI_Gene:231801,ENSEMBL:ENSMUSG00000029722	MGI:2443267	protein coding gene	ArfGAP with FG repeats 2
5	gene	137.68515	137.69075	negative	MGI_C57BL6J_3782945	Gm15498	ENSEMBL:ENSMUSG00000079163	MGI:3782945	lncRNA gene	predicted gene 15498
5	gene	137.70712	137.71963	positive	MGI_C57BL6J_5595562	Gm36403	NCBI_Gene:102640302	MGI:5595562	lncRNA gene	predicted gene, 36403
5	pseudogene	137.71977	137.72249	negative	MGI_C57BL6J_3783195	Gm15753	NCBI_Gene:624083,ENSEMBL:ENSMUSG00000082088	MGI:3783195	pseudogene	predicted gene 15753
5	gene	137.72990	137.74161	negative	MGI_C57BL6J_2443880	Nyap1	NCBI_Gene:243300,ENSEMBL:ENSMUSG00000045348	MGI:2443880	protein coding gene	neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
5	gene	137.74573	137.76845	positive	MGI_C57BL6J_1926079	Tsc22d4	NCBI_Gene:78829,ENSEMBL:ENSMUSG00000029723	MGI:1926079	protein coding gene	TSC22 domain family, member 4
5	gene	137.77885	137.78013	positive	MGI_C57BL6J_1922853	Ppp1r35	NCBI_Gene:69871,ENSEMBL:ENSMUSG00000029725	MGI:1922853	protein coding gene	protein phosphatase 1, regulatory subunit 35
5	gene	137.78191	137.78766	negative	MGI_C57BL6J_106477	Mepce	NCBI_Gene:231803,ENSEMBL:ENSMUSG00000029726	MGI:106477	protein coding gene	methylphosphate capping enzyme
5	gene	137.78709	137.82262	positive	MGI_C57BL6J_2685899	Zcwpw1	NCBI_Gene:381678,ENSEMBL:ENSMUSG00000037108	MGI:2685899	protein coding gene	zinc finger, CW type with PWWP domain 1
5	gene	137.82195	137.83628	negative	MGI_C57BL6J_2450529	Pilra	NCBI_Gene:231805,ENSEMBL:ENSMUSG00000046245	MGI:2450529	protein coding gene	paired immunoglobin-like type 2 receptor alpha
5	gene	137.85214	137.85853	negative	MGI_C57BL6J_2450532	Pilrb1	NCBI_Gene:170741,ENSEMBL:ENSMUSG00000066684	MGI:2450532	protein coding gene	paired immunoglobin-like type 2 receptor beta 1
5	gene	137.85689	137.86553	positive	MGI_C57BL6J_5595710	Gm36551	NCBI_Gene:102640510,ENSEMBL:ENSMUSG00000106478	MGI:5595710	lncRNA gene	predicted gene, 36551
5	gene	137.86582	137.87191	negative	MGI_C57BL6J_2450535	Pilrb2	NCBI_Gene:545812,ENSEMBL:ENSMUSG00000066682	MGI:2450535	protein coding gene	paired immunoglobin-like type 2 receptor beta 2
5	gene	137.87075	137.87121	positive	MGI_C57BL6J_5663632	Gm43495	ENSEMBL:ENSMUSG00000106155	MGI:5663632	lncRNA gene	predicted gene 43495
5	pseudogene	137.87524	137.87562	negative	MGI_C57BL6J_5663631	Gm43494	ENSEMBL:ENSMUSG00000105649	MGI:5663631	pseudogene	predicted gene 43494
5	pseudogene	137.88807	137.89174	positive	MGI_C57BL6J_3781279	Gm3103	NCBI_Gene:100041027,ENSEMBL:ENSMUSG00000106435	MGI:3781279	pseudogene	predicted gene 3103
5	gene	137.89293	137.92162	negative	MGI_C57BL6J_88610	Cyp3a13	NCBI_Gene:13113,ENSEMBL:ENSMUSG00000029727	MGI:88610	protein coding gene	cytochrome P450, family 3, subfamily a, polypeptide 13
5	pseudogene	137.89675	137.89696	negative	MGI_C57BL6J_3782949	Gm15502	ENSEMBL:ENSMUSG00000083813	MGI:3782949	pseudogene	predicted gene 15502
5	pseudogene	137.92827	137.92920	positive	MGI_C57BL6J_3645754	Gm8099	NCBI_Gene:666429,ENSEMBL:ENSMUSG00000105787	MGI:3645754	pseudogene	predicted gene 8099
5	gene	137.95099	137.96338	negative	MGI_C57BL6J_2153041	Gjc3	NCBI_Gene:118446,ENSEMBL:ENSMUSG00000056966	MGI:2153041	protein coding gene	gap junction protein, gamma 3
5	gene	137.98152	137.99023	positive	MGI_C57BL6J_103163	Azgp1	NCBI_Gene:12007,ENSEMBL:ENSMUSG00000037053	MGI:103163	protein coding gene	alpha-2-glycoprotein 1, zinc
5	pseudogene	137.99303	137.99347	negative	MGI_C57BL6J_3645168	Gm4963	NCBI_Gene:243302,ENSEMBL:ENSMUSG00000063739	MGI:3645168	pseudogene	predicted gene 4963
5	pseudogene	138.01742	138.01793	positive	MGI_C57BL6J_5579833	Gm29127	ENSEMBL:ENSMUSG00000100543	MGI:5579833	pseudogene	predicted gene 29127
5	gene	138.02126	138.03466	positive	MGI_C57BL6J_3693943	Smok3a	NCBI_Gene:545814,ENSEMBL:ENSMUSG00000075599	MGI:3693943	protein coding gene	sperm motility kinase 3A
5	gene	138.02143	138.05064	positive	MGI_C57BL6J_3615348	Smok3b	NCBI_Gene:622474,ENSEMBL:ENSMUSG00000079156	MGI:3615348	protein coding gene	sperm motility kinase 3B
5	gene	138.05319	138.06654	positive	MGI_C57BL6J_3647925	Smok3c	NCBI_Gene:622486,ENSEMBL:ENSMUSG00000075598	MGI:3647925	protein coding gene	sperm motility kinase 3C
5	gene	138.08507	138.10782	positive	MGI_C57BL6J_1921820	Zkscan1	NCBI_Gene:74570,ENSEMBL:ENSMUSG00000029729	MGI:1921820	protein coding gene	zinc finger with KRAB and SCAN domains 1
5	pseudogene	138.10691	138.10711	positive	MGI_C57BL6J_5663630	Gm43493	ENSEMBL:ENSMUSG00000106102	MGI:5663630	pseudogene	predicted gene 43493
5	gene	138.11690	138.13426	positive	MGI_C57BL6J_99182	Zscan21	NCBI_Gene:22697,ENSEMBL:ENSMUSG00000037017	MGI:99182	protein coding gene	zinc finger and SCAN domain containing 21
5	gene	138.13970	138.15574	negative	MGI_C57BL6J_1929116	Zfp113	NCBI_Gene:56314,ENSEMBL:ENSMUSG00000037007	MGI:1929116	protein coding gene	zinc finger protein 113
5	gene	138.16107	138.16465	positive	MGI_C57BL6J_1349439	Cops6	NCBI_Gene:26893,ENSEMBL:ENSMUSG00000019494	MGI:1349439	protein coding gene	COP9 signalosome subunit 6
5	gene	138.16458	138.17242	negative	MGI_C57BL6J_1298398	Mcm7	NCBI_Gene:17220,ENSEMBL:ENSMUSG00000029730	MGI:1298398	protein coding gene	minichromosome maintenance complex component 7
5	gene	138.16532	138.16540	negative	MGI_C57BL6J_3619266	Mir25	miRBase:MI0000689,NCBI_Gene:723926,ENSEMBL:ENSMUSG00000065394	MGI:3619266	miRNA gene	microRNA 25
5	gene	138.16552	138.16561	negative	MGI_C57BL6J_3619439	Mir93	miRBase:MI0000581,NCBI_Gene:723885,ENSEMBL:ENSMUSG00000065527	MGI:3619439	miRNA gene	microRNA 93
5	gene	138.16574	138.16582	negative	MGI_C57BL6J_3619060	Mir106b	miRBase:MI0000407,NCBI_Gene:723925,ENSEMBL:ENSMUSG00000065514	MGI:3619060	miRNA gene	microRNA 106b
5	gene	138.17200	138.18043	positive	MGI_C57BL6J_1337063	Ap4m1	NCBI_Gene:11781,ENSEMBL:ENSMUSG00000019518	MGI:1337063	protein coding gene	adaptor-related protein complex AP-4, mu 1
5	gene	138.17862	138.18745	negative	MGI_C57BL6J_109129	Taf6	NCBI_Gene:21343,ENSEMBL:ENSMUSG00000036980	MGI:109129	protein coding gene	TATA-box binding protein associated factor 6
5	gene	138.18749	138.19392	positive	MGI_C57BL6J_1913705	Cnpy4	NCBI_Gene:66455,ENSEMBL:ENSMUSG00000036968	MGI:1913705	protein coding gene	canopy FGF signaling regulator 4
5	gene	138.19431	138.19562	positive	MGI_C57BL6J_2679717	Mblac1	NCBI_Gene:330216,ENSEMBL:ENSMUSG00000049285	MGI:2679717	protein coding gene	metallo-beta-lactamase domain containing 1
5	gene	138.20272	138.20735	negative	MGI_C57BL6J_2685300	Gm454	NCBI_Gene:243303,ENSEMBL:ENSMUSG00000089783	MGI:2685300	lncRNA gene	predicted gene 454
5	gene	138.20750	138.25336	positive	MGI_C57BL6J_3584036	Nxpe5	NCBI_Gene:381680,ENSEMBL:ENSMUSG00000047592	MGI:3584036	protein coding gene	neurexophilin and PC-esterase domain family, member 5
5	gene	138.20751	138.20797	positive	MGI_C57BL6J_5663782	Gm43645	ENSEMBL:ENSMUSG00000106338	MGI:5663782	lncRNA gene	predicted gene 43645
5	gene	138.21974	138.21982	positive	MGI_C57BL6J_5452733	Gm22956	ENSEMBL:ENSMUSG00000084469	MGI:5452733	snRNA gene	predicted gene, 22956
5	gene	138.25548	138.25940	positive	MGI_C57BL6J_1913346	Lamtor4	NCBI_Gene:66096,ENSEMBL:ENSMUSG00000050552	MGI:1913346	protein coding gene	late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
5	gene	138.25966	138.26405	negative	MGI_C57BL6J_2385896	Map11	NCBI_Gene:231807,ENSEMBL:ENSMUSG00000036948	MGI:2385896	protein coding gene	microtubule associated protein 11
5	gene	138.26404	138.26666	positive	MGI_C57BL6J_3697416	6330418K02Rik	NCBI_Gene:69004,ENSEMBL:ENSMUSG00000085227	MGI:3697416	lncRNA gene	RIKEN cDNA 6330418K02 gene
5	gene	138.26492	138.27308	negative	MGI_C57BL6J_1916254	Gal3st4	NCBI_Gene:330217,ENSEMBL:ENSMUSG00000075593	MGI:1916254	protein coding gene	galactose-3-O-sulfotransferase 4
5	gene	138.26495	138.27996	negative	MGI_C57BL6J_5663857	Gm43720	ENSEMBL:ENSMUSG00000106247	MGI:5663857	protein coding gene	predicted gene 43720
5	gene	138.27259	138.31240	positive	MGI_C57BL6J_1355311	Stag3	NCBI_Gene:50878,ENSEMBL:ENSMUSG00000036928	MGI:1355311	protein coding gene	stromal antigen 3
5	gene	138.27365	138.28002	negative	MGI_C57BL6J_1919201	Gpc2	NCBI_Gene:71951,ENSEMBL:ENSMUSG00000029510	MGI:1919201	protein coding gene	glypican 2 (cerebroglycan)
5	gene	138.34177	138.35980	positive	MGI_C57BL6J_5596028	Pvrig	NCBI_Gene:102640920,ENSEMBL:ENSMUSG00000109713	MGI:5596028	protein coding gene	poliovirus receptor related immunoglobulin domain containing
5	pseudogene	138.34731	138.36206	positive	MGI_C57BL6J_3648938	Pvrig-ps	NCBI_Gene:620147,ENSEMBL:ENSMUSG00000106161	MGI:3648938	pseudogene	poliovirus receptor related immunoglobulin domain containing, pseudogene
5	pseudogene	138.36327	138.36561	negative	MGI_C57BL6J_104721	Got2-ps1	NCBI_Gene:14720,ENSEMBL:ENSMUSG00000080935	MGI:104721	pseudogene	glutamatic-oxaloacetic transaminase 2, mitochondrial, pseudogene 1
5	gene	138.36372	138.38829	positive	MGI_C57BL6J_3704261	Gm10874	ENSEMBL:ENSMUSG00000075591	MGI:3704261	lncRNA gene	predicted gene 10874
5	gene	138.37859	138.37870	positive	MGI_C57BL6J_5455302	Gm25525	ENSEMBL:ENSMUSG00000093932	MGI:5455302	snRNA gene	predicted gene, 25525
5	pseudogene	138.38379	138.39159	negative	MGI_C57BL6J_5295684	Cyp3a61-ps1	NCBI_Gene:100125874,ENSEMBL:ENSMUSG00000112214	MGI:5295684	pseudogene	cytochrome P450, family 3, subfamily a, member 61, pseudogene 1
5	pseudogene	138.41259	138.41291	negative	MGI_C57BL6J_6097344	Gm48029	ENSEMBL:ENSMUSG00000112194	MGI:6097344	pseudogene	predicted gene, 48029
5	gene	138.44146	138.46090	positive	MGI_C57BL6J_1919404	Zfp157	NCBI_Gene:72154,ENSEMBL:ENSMUSG00000036898	MGI:1919404	protein coding gene	zinc finger protein 157
5	pseudogene	138.50471	138.50645	positive	MGI_C57BL6J_3645018	Gm5564	NCBI_Gene:433955,ENSEMBL:ENSMUSG00000046440	MGI:3645018	pseudogene	predicted gene 5564
5	pseudogene	138.51944	138.53299	positive	MGI_C57BL6J_3761469	Vmn2r-ps24	NCBI_Gene:666533,ENSEMBL:ENSMUSG00000104668	MGI:3761469	pseudogene	vomeronasal 2, receptor, pseudogene 24
5	gene	138.55977	138.56556	negative	MGI_C57BL6J_1923908	1700123K08Rik	NCBI_Gene:76658,ENSEMBL:ENSMUSG00000029526	MGI:1923908	protein coding gene	RIKEN cDNA 1700123K08 gene
5	gene	138.60365	138.61976	negative	MGI_C57BL6J_1344427	Zfp68	NCBI_Gene:24135,ENSEMBL:ENSMUSG00000058291	MGI:1344427	protein coding gene	zinc finger protein 68
5	gene	138.60670	138.60678	positive	MGI_C57BL6J_5453859	Gm24082	ENSEMBL:ENSMUSG00000092916	MGI:5453859	miRNA gene	predicted gene, 24082
5	pseudogene	138.61074	138.61129	positive	MGI_C57BL6J_3782944	Gm15497	ENSEMBL:ENSMUSG00000081142	MGI:3782944	pseudogene	predicted gene 15497
5	gene	138.61929	138.62076	positive	MGI_C57BL6J_5662952	Gm42815	ENSEMBL:ENSMUSG00000104686	MGI:5662952	unclassified gene	predicted gene 42815
5	gene	138.62286	138.65241	positive	MGI_C57BL6J_3583896	A430033K04Rik	NCBI_Gene:243308,ENSEMBL:ENSMUSG00000056014	MGI:3583896	protein coding gene	RIKEN cDNA A430033K04 gene
5	gene	138.72539	138.72618	positive	MGI_C57BL6J_5611460	Gm38232	ENSEMBL:ENSMUSG00000103298	MGI:5611460	unclassified gene	predicted gene, 38232
5	gene	138.75431	138.81008	positive	MGI_C57BL6J_2136853	Fam20c	NCBI_Gene:80752,ENSEMBL:ENSMUSG00000025854	MGI:2136853	protein coding gene	family with sequence similarity 20, member C
5	gene	138.81962	138.82173	positive	MGI_C57BL6J_3646467	Gm5294	NCBI_Gene:384244,ENSEMBL:ENSMUSG00000094504	MGI:3646467	protein coding gene	predicted gene 5294
5	gene	138.82381	138.82523	negative	MGI_C57BL6J_5589365	Gm30206	NCBI_Gene:102632029	MGI:5589365	lncRNA gene	predicted gene, 30206
5	pseudogene	138.86305	138.91060	positive	MGI_C57BL6J_5591050	Gm31891	NCBI_Gene:102634264	MGI:5591050	pseudogene	predicted gene, 31891
5	gene	138.93459	138.94516	positive	MGI_C57BL6J_5621611	Gm38726	NCBI_Gene:105242542	MGI:5621611	lncRNA gene	predicted gene, 38726
5	gene	138.97601	138.99769	negative	MGI_C57BL6J_97527	Pdgfa	NCBI_Gene:18590,ENSEMBL:ENSMUSG00000025856	MGI:97527	protein coding gene	platelet derived growth factor, alpha
5	gene	138.99506	139.00058	positive	MGI_C57BL6J_1917994	6330403L08Rik	ENSEMBL:ENSMUSG00000075585	MGI:1917994	lncRNA gene	RIKEN cDNA 6330403L08 gene
5	gene	139.01730	139.15070	negative	MGI_C57BL6J_97759	Prkar1b	NCBI_Gene:19085,ENSEMBL:ENSMUSG00000025855	MGI:97759	protein coding gene	protein kinase, cAMP dependent regulatory, type I beta
5	gene	139.13583	139.13942	negative	MGI_C57BL6J_2443134	9330169B04Rik	NA	NA	unclassified gene	RIKEN cDNA 9330169B04 gene
5	gene	139.14758	139.15069	negative	MGI_C57BL6J_3783114	Gm15672	ENSEMBL:ENSMUSG00000086873	MGI:3783114	lncRNA gene	predicted gene 15672
5	gene	139.15022	139.18651	positive	MGI_C57BL6J_3616079	Dnaaf5	NCBI_Gene:433956,ENSEMBL:ENSMUSG00000025857	MGI:3616079	protein coding gene	dynein, axonemal assembly factor 5
5	gene	139.20056	139.24984	positive	MGI_C57BL6J_1924303	Sun1	NCBI_Gene:77053,ENSEMBL:ENSMUSG00000036817	MGI:1924303	protein coding gene	Sad1 and UNC84 domain containing 1
5	gene	139.21547	139.21636	negative	MGI_C57BL6J_1925432	4930520M14Rik	ENSEMBL:ENSMUSG00000106127	MGI:1925432	lncRNA gene	RIKEN cDNA 4930520M14 gene
5	gene	139.25158	139.27005	positive	MGI_C57BL6J_1914854	Get4	NCBI_Gene:67604,ENSEMBL:ENSMUSG00000025858	MGI:1914854	protein coding gene	golgi to ER traffic protein 4
5	gene	139.27188	139.32562	negative	MGI_C57BL6J_2442201	Adap1	NCBI_Gene:231821,ENSEMBL:ENSMUSG00000056413	MGI:2442201	protein coding gene	ArfGAP with dual PH domains 1
5	gene	139.31242	139.31270	positive	MGI_C57BL6J_5530698	Gm27316	ENSEMBL:ENSMUSG00000098690	MGI:5530698	unclassified non-coding RNA gene	predicted gene, 27316
5	gene	139.33619	139.35142	negative	MGI_C57BL6J_1915283	Cox19	NCBI_Gene:68033,ENSEMBL:ENSMUSG00000045438	MGI:1915283	protein coding gene	cytochrome c oxidase assembly protein 19
5	gene	139.35262	139.35961	positive	MGI_C57BL6J_3616076	Cyp2w1	NCBI_Gene:545817,ENSEMBL:ENSMUSG00000029541	MGI:3616076	protein coding gene	cytochrome P450, family 2, subfamily w, polypeptide 1
5	gene	139.35974	139.46053	negative	MGI_C57BL6J_1920462	3110082I17Rik	NCBI_Gene:73212,ENSEMBL:ENSMUSG00000053553	MGI:1920462	protein coding gene	RIKEN cDNA 3110082I17 gene
5	gene	139.36929	139.37225	negative	MGI_C57BL6J_1926042	4930432F04Rik	NA	NA	unclassified gene	RIKEN cDNA 4930432F04 gene
5	gene	139.36965	139.36974	negative	MGI_C57BL6J_3619354	Mir339	miRBase:MI0000621,NCBI_Gene:723898,ENSEMBL:ENSMUSG00000065593	MGI:3619354	miRNA gene	microRNA 339
5	gene	139.37643	139.39641	positive	MGI_C57BL6J_1933113	Gpr146	NCBI_Gene:80290,ENSEMBL:ENSMUSG00000044197	MGI:1933113	protein coding gene	G protein-coupled receptor 146
5	gene	139.37770	139.38005	positive	MGI_C57BL6J_2443565	D830046C22Rik	NA	NA	lncRNA gene	RIKEN cDNA D830046C22 gene
5	gene	139.40404	139.41609	positive	MGI_C57BL6J_2442694	C130050O18Rik	NCBI_Gene:319772,ENSEMBL:ENSMUSG00000044092	MGI:2442694	protein coding gene	RIKEN cDNA C130050O18 gene
5	gene	139.42297	139.42780	positive	MGI_C57BL6J_1924104	Gper1	NCBI_Gene:76854,ENSEMBL:ENSMUSG00000053647	MGI:1924104	protein coding gene	G protein-coupled estrogen receptor 1
5	gene	139.44360	139.44370	positive	MGI_C57BL6J_5456062	Gm26285	ENSEMBL:ENSMUSG00000095016	MGI:5456062	snRNA gene	predicted gene, 26285
5	gene	139.47121	139.48455	negative	MGI_C57BL6J_2140729	Zfand2a	NCBI_Gene:100494,ENSEMBL:ENSMUSG00000053581	MGI:2140729	protein coding gene	zinc finger, AN1-type domain 2A
5	gene	139.52375	139.54134	positive	MGI_C57BL6J_1922223	4930500L23Rik	NCBI_Gene:74973,ENSEMBL:ENSMUSG00000106056	MGI:1922223	lncRNA gene	RIKEN cDNA 4930500L23 gene
5	gene	139.54349	139.54818	positive	MGI_C57BL6J_108013	Uncx	NCBI_Gene:22255,ENSEMBL:ENSMUSG00000029546	MGI:108013	protein coding gene	UNC homeobox
5	gene	139.66086	139.66921	negative	MGI_C57BL6J_5826563	Gm46926	NCBI_Gene:108169078	MGI:5826563	lncRNA gene	predicted gene, 46926
5	pseudogene	139.70165	139.70202	positive	MGI_C57BL6J_5662561	Gm42424	ENSEMBL:ENSMUSG00000104637	MGI:5662561	pseudogene	predicted gene 42424
5	gene	139.70669	139.73634	negative	MGI_C57BL6J_2444818	Micall2	NCBI_Gene:231830,ENSEMBL:ENSMUSG00000036718	MGI:2444818	protein coding gene	MICAL-like 2
5	gene	139.75128	139.77570	negative	MGI_C57BL6J_1915760	Ints1	NCBI_Gene:68510,ENSEMBL:ENSMUSG00000029547	MGI:1915760	protein coding gene	integrator complex subunit 1
5	gene	139.76788	139.76794	negative	MGI_C57BL6J_5530829	Mir7037	miRBase:MI0022886,NCBI_Gene:102465628,ENSEMBL:ENSMUSG00000098574	MGI:5530829	miRNA gene	microRNA 7037
5	gene	139.79151	139.80265	positive	MGI_C57BL6J_99951	Mafk	NCBI_Gene:17135,ENSEMBL:ENSMUSG00000018143	MGI:99951	protein coding gene	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
5	gene	139.80248	139.81997	negative	MGI_C57BL6J_2385897	Tmem184a	NCBI_Gene:231832,ENSEMBL:ENSMUSG00000036687	MGI:2385897	protein coding gene	transmembrane protein 184a
5	gene	139.80798	139.82641	negative	MGI_C57BL6J_5504053	Gm26938	ENSEMBL:ENSMUSG00000098140	MGI:5504053	protein coding gene	predicted gene, 26938
5	gene	139.82106	139.83321	positive	MGI_C57BL6J_5826564	Gm46927	NCBI_Gene:108169079	MGI:5826564	lncRNA gene	predicted gene, 46927
5	gene	139.82359	139.82701	negative	MGI_C57BL6J_1913756	Psmg3	NCBI_Gene:66506,ENSEMBL:ENSMUSG00000029551	MGI:1913756	protein coding gene	proteasome (prosome, macropain) assembly chaperone 3
5	gene	139.83653	139.83834	positive	MGI_C57BL6J_5621612	Gm38727	NCBI_Gene:105242544	MGI:5621612	lncRNA gene	predicted gene, 38727
5	gene	139.84493	139.84525	positive	MGI_C57BL6J_5453923	Gm24146	ENSEMBL:ENSMUSG00000064694	MGI:5453923	unclassified non-coding RNA gene	predicted gene, 24146
5	gene	139.89581	139.90273	positive	MGI_C57BL6J_5662560	Gm42423	ENSEMBL:ENSMUSG00000105335	MGI:5662560	lncRNA gene	predicted gene 42423
5	gene	139.90764	139.97473	positive	MGI_C57BL6J_2442479	Elfn1	NCBI_Gene:243312,ENSEMBL:ENSMUSG00000048988	MGI:2442479	protein coding gene	leucine rich repeat and fibronectin type III, extracellular 1
5	pseudogene	139.96330	139.96379	negative	MGI_C57BL6J_5663841	Gm43704	ENSEMBL:ENSMUSG00000106090	MGI:5663841	pseudogene	predicted gene 43704
5	gene	140.00869	140.32159	negative	MGI_C57BL6J_1341857	Mad1l1	NCBI_Gene:17120,ENSEMBL:ENSMUSG00000029554	MGI:1341857	protein coding gene	MAD1 mitotic arrest deficient 1-like 1
5	gene	140.02963	140.03218	negative	MGI_C57BL6J_5663839	Gm43702	ENSEMBL:ENSMUSG00000105453	MGI:5663839	unclassified gene	predicted gene 43702
5	gene	140.07411	140.08551	positive	MGI_C57BL6J_3801886	Gm16122	ENSEMBL:ENSMUSG00000085673	MGI:3801886	lncRNA gene	predicted gene 16122
5	gene	140.09472	140.10019	positive	MGI_C57BL6J_5589651	Gm30492	NCBI_Gene:102632414	MGI:5589651	lncRNA gene	predicted gene, 30492
5	gene	140.10120	140.10759	positive	MGI_C57BL6J_3802131	Gm16121	ENSEMBL:ENSMUSG00000087606	MGI:3802131	lncRNA gene	predicted gene 16121
5	gene	140.14916	140.15149	negative	MGI_C57BL6J_5663332	Gm43195	ENSEMBL:ENSMUSG00000106497	MGI:5663332	unclassified gene	predicted gene 43195
5	gene	140.20738	140.21360	positive	MGI_C57BL6J_3802132	Gm16120	NCBI_Gene:105242545,ENSEMBL:ENSMUSG00000087248	MGI:3802132	lncRNA gene	predicted gene 16120
5	gene	140.32162	140.32384	negative	MGI_C57BL6J_5663475	Gm43338	ENSEMBL:ENSMUSG00000105679	MGI:5663475	unclassified gene	predicted gene 43338
5	gene	140.32163	140.33814	positive	MGI_C57BL6J_109280	Nudt1	NCBI_Gene:17766,ENSEMBL:ENSMUSG00000036639	MGI:109280	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 1
5	gene	140.32482	140.32533	negative	MGI_C57BL6J_1917813	5730453C05Rik	NA	NA	unclassified gene	RIKEN cDNA 5730453C05 gene
5	gene	140.32767	140.33190	negative	MGI_C57BL6J_1915267	Mrm2	NCBI_Gene:68017,ENSEMBL:ENSMUSG00000029557	MGI:1915267	protein coding gene	mitochondrial rRNA methyltransferase 2
5	gene	140.34030	140.38926	negative	MGI_C57BL6J_2443816	Snx8	NCBI_Gene:231834,ENSEMBL:ENSMUSG00000029560	MGI:2443816	protein coding gene	sorting nexin 8
5	gene	140.40640	140.41036	positive	MGI_C57BL6J_5589709	Gm30550	NCBI_Gene:102632491	MGI:5589709	lncRNA gene	predicted gene, 30550
5	gene	140.41931	140.44336	positive	MGI_C57BL6J_106478	Eif3b	NCBI_Gene:27979,ENSEMBL:ENSMUSG00000056076	MGI:106478	protein coding gene	eukaryotic translation initiation factor 3, subunit B
5	gene	140.42734	140.42741	positive	MGI_C57BL6J_5531337	Mir7038	miRBase:MI0022887,NCBI_Gene:102466792,ENSEMBL:ENSMUSG00000098319	MGI:5531337	miRNA gene	microRNA 7038
5	gene	140.44565	140.49588	positive	MGI_C57BL6J_3646257	Gm4869	NCBI_Gene:101055939,ENSEMBL:ENSMUSG00000106350	MGI:3646257	protein coding gene	predicted gene 4869
5	pseudogene	140.45342	140.45389	negative	MGI_C57BL6J_5662942	Gm42805	ENSEMBL:ENSMUSG00000105056	MGI:5662942	pseudogene	predicted gene 42805
5	gene	140.50309	140.51827	negative	MGI_C57BL6J_5621613	Gm38728	NCBI_Gene:105242546	MGI:5621613	lncRNA gene	predicted gene, 38728
5	gene	140.50555	140.52572	positive	MGI_C57BL6J_1929064	Chst12	NCBI_Gene:59031,ENSEMBL:ENSMUSG00000036599	MGI:1929064	protein coding gene	carbohydrate sulfotransferase 12
5	gene	140.53785	140.54976	negative	MGI_C57BL6J_5662945	Gm42808	NCBI_Gene:108169080,ENSEMBL:ENSMUSG00000105845	MGI:5662945	lncRNA gene	predicted gene 42808
5	pseudogene	140.53908	140.58515	positive	MGI_C57BL6J_5591317	Gm32158	NCBI_Gene:102634619,ENSEMBL:ENSMUSG00000105633	MGI:5591317	pseudogene	predicted gene, 32158
5	gene	140.56312	140.56763	negative	MGI_C57BL6J_1925248	Grifin	NCBI_Gene:77998,ENSEMBL:ENSMUSG00000036586	MGI:1925248	protein coding gene	galectin-related inter-fiber protein
5	gene	140.58910	140.59660	negative	MGI_C57BL6J_5589762	Gm30603	NCBI_Gene:102632562	MGI:5589762	lncRNA gene	predicted gene, 30603
5	gene	140.60579	140.60655	negative	MGI_C57BL6J_5663840	Gm43703	ENSEMBL:ENSMUSG00000105699	MGI:5663840	lncRNA gene	predicted gene 43703
5	gene	140.60732	140.61554	positive	MGI_C57BL6J_1095413	Lfng	NCBI_Gene:16848,ENSEMBL:ENSMUSG00000029570	MGI:1095413	protein coding gene	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
5	gene	140.61569	140.61834	positive	MGI_C57BL6J_3641677	Gm10091	NA	NA	unclassified gene	predicted gene 10091
5	gene	140.62058	140.64903	negative	MGI_C57BL6J_1925589	Ttyh3	NCBI_Gene:78339,ENSEMBL:ENSMUSG00000036565	MGI:1925589	protein coding gene	tweety family member 3
5	gene	140.66183	140.70243	negative	MGI_C57BL6J_1921489	Iqce	NCBI_Gene:74239,ENSEMBL:ENSMUSG00000036555	MGI:1921489	protein coding gene	IQ motif containing E
5	gene	140.70478	140.71938	positive	MGI_C57BL6J_1891679	Brat1	NCBI_Gene:231841,ENSEMBL:ENSMUSG00000000148	MGI:1891679	protein coding gene	BRCA1-associated ATM activator 1
5	gene	140.72413	140.76144	positive	MGI_C57BL6J_2442258	Amz1	NCBI_Gene:231842,ENSEMBL:ENSMUSG00000050022	MGI:2442258	protein coding gene	archaelysin family metallopeptidase 1
5	gene	140.74869	140.75009	negative	MGI_C57BL6J_5589904	Gm30745	NCBI_Gene:102632756	MGI:5589904	lncRNA gene	predicted gene, 30745
5	gene	140.75841	140.83043	negative	MGI_C57BL6J_95767	Gna12	NCBI_Gene:14673,ENSEMBL:ENSMUSG00000000149	MGI:95767	protein coding gene	guanine nucleotide binding protein, alpha 12
5	gene	140.85251	140.88028	positive	MGI_C57BL6J_5589963	Gm30804	NCBI_Gene:102632835	MGI:5589963	lncRNA gene	predicted gene, 30804
5	gene	140.87299	141.00060	negative	MGI_C57BL6J_1916978	Card11	NCBI_Gene:108723,ENSEMBL:ENSMUSG00000036526	MGI:1916978	protein coding gene	caspase recruitment domain family, member 11
5	gene	141.00500	141.01349	negative	MGI_C57BL6J_5621614	Gm38729	NCBI_Gene:105242547	MGI:5621614	lncRNA gene	predicted gene, 38729
5	gene	141.02993	141.03001	positive	MGI_C57BL6J_5690777	Gm44385	ENSEMBL:ENSMUSG00000104683	MGI:5690777	miRNA gene	predicted gene, 44385
5	gene	141.06423	141.07468	positive	MGI_C57BL6J_5621615	Gm38730	NCBI_Gene:105242548	MGI:5621615	lncRNA gene	predicted gene, 38730
5	gene	141.08043	141.08051	positive	MGI_C57BL6J_5455890	Gm26113	ENSEMBL:ENSMUSG00000093344	MGI:5455890	miRNA gene	predicted gene, 26113
5	gene	141.12486	141.15898	positive	MGI_C57BL6J_5590025	Gm30866	NCBI_Gene:102632914	MGI:5590025	lncRNA gene	predicted gene, 30866
5	gene	141.24149	142.21559	positive	MGI_C57BL6J_2444413	Sdk1	NCBI_Gene:330222,ENSEMBL:ENSMUSG00000039683	MGI:2444413	protein coding gene	sidekick cell adhesion molecule 1
5	pseudogene	141.26758	141.26882	negative	MGI_C57BL6J_3645394	Gm6433	NCBI_Gene:108169090,ENSEMBL:ENSMUSG00000083382	MGI:3645394	pseudogene	predicted gene 6433
5	gene	141.29714	141.29810	negative	MGI_C57BL6J_5663845	Gm43708	ENSEMBL:ENSMUSG00000105873	MGI:5663845	unclassified gene	predicted gene 43708
5	gene	141.30739	141.30807	negative	MGI_C57BL6J_5663693	Gm43556	ENSEMBL:ENSMUSG00000105344	MGI:5663693	unclassified gene	predicted gene 43556
5	gene	141.31576	141.31813	negative	MGI_C57BL6J_5663694	Gm43557	ENSEMBL:ENSMUSG00000105212	MGI:5663694	unclassified gene	predicted gene 43557
5	gene	141.36110	141.38338	negative	MGI_C57BL6J_3801892	Gm16035	NCBI_Gene:102632986,ENSEMBL:ENSMUSG00000084934	MGI:3801892	lncRNA gene	predicted gene 16035
5	gene	141.56614	141.56625	negative	MGI_C57BL6J_5453908	Gm24131	ENSEMBL:ENSMUSG00000089164	MGI:5453908	snRNA gene	predicted gene, 24131
5	gene	141.59388	141.59508	positive	MGI_C57BL6J_1916521	3200001G23Rik	NA	NA	unclassified gene	RIKEN cDNA 3200001G23 gene
5	gene	141.59599	141.61600	negative	MGI_C57BL6J_3801891	Gm16036	ENSEMBL:ENSMUSG00000085540	MGI:3801891	lncRNA gene	predicted gene 16036
5	gene	142.11195	142.11233	negative	MGI_C57BL6J_2441967	D330005C11Rik	NA	NA	unclassified gene	RIKEN cDNA D330005C11 gene
5	pseudogene	142.28311	142.28407	positive	MGI_C57BL6J_5504085	Gm26970	ENSEMBL:ENSMUSG00000097947	MGI:5504085	pseudogene	predicted gene, 26970
5	gene	142.35015	142.36330	negative	MGI_C57BL6J_5590157	Gm30998	NCBI_Gene:102633087	MGI:5590157	lncRNA gene	predicted gene, 30998
5	gene	142.36502	142.36720	positive	MGI_C57BL6J_5590227	Gm31068	NCBI_Gene:102633174	MGI:5590227	lncRNA gene	predicted gene, 31068
5	gene	142.38009	142.38821	negative	MGI_C57BL6J_5590286	Gm31127	NCBI_Gene:102633260	MGI:5590286	lncRNA gene	predicted gene, 31127
5	gene	142.40150	142.46202	positive	MGI_C57BL6J_1347488	Foxk1	NCBI_Gene:17425,ENSEMBL:ENSMUSG00000056493	MGI:1347488	protein coding gene	forkhead box K1
5	gene	142.45652	142.45758	negative	MGI_C57BL6J_3704262	Gm10868	NA	NA	unclassified gene	predicted gene 10868
5	gene	142.46320	142.47872	positive	MGI_C57BL6J_1924908	Ap5z1	NCBI_Gene:231855,ENSEMBL:ENSMUSG00000039623	MGI:1924908	protein coding gene	adaptor-related protein complex 5, zeta 1 subunit
5	gene	142.48484	142.55110	negative	MGI_C57BL6J_2443088	Radil	NCBI_Gene:231858,ENSEMBL:ENSMUSG00000029576	MGI:2443088	protein coding gene	Ras association and DIL domains
5	gene	142.50074	142.51441	positive	MGI_C57BL6J_5621617	Gm38732	NCBI_Gene:105242552	MGI:5621617	lncRNA gene	predicted gene, 38732
5	gene	142.52584	142.53008	negative	MGI_C57BL6J_1932115	Papolb	NCBI_Gene:56522,ENSEMBL:ENSMUSG00000074817	MGI:1932115	protein coding gene	poly (A) polymerase beta (testis specific)
5	pseudogene	142.55644	142.55695	positive	MGI_C57BL6J_5663174	Gm43037	ENSEMBL:ENSMUSG00000105213	MGI:5663174	pseudogene	predicted gene 43037
5	gene	142.56236	142.60881	negative	MGI_C57BL6J_1922354	Mmd2	NCBI_Gene:75104,ENSEMBL:ENSMUSG00000039533	MGI:1922354	protein coding gene	monocyte to macrophage differentiation-associated 2
5	pseudogene	142.62246	142.62360	negative	MGI_C57BL6J_5590433	Gm31274	NCBI_Gene:102633454,ENSEMBL:ENSMUSG00000104978	MGI:5590433	pseudogene	predicted gene, 31274
5	gene	142.62770	142.63049	negative	MGI_C57BL6J_3641697	B630006N21Rik	NA	NA	unclassified gene	RIKEN cDNA B630006N21 gene
5	gene	142.62770	142.67059	positive	MGI_C57BL6J_1923831	Wipi2	NCBI_Gene:74781,ENSEMBL:ENSMUSG00000029578	MGI:1923831	protein coding gene	WD repeat domain, phosphoinositide interacting 2
5	gene	142.67187	142.69336	negative	MGI_C57BL6J_5623237	Gm40352	NCBI_Gene:105244807	MGI:5623237	lncRNA gene	predicted gene, 40352
5	gene	142.69248	142.72249	positive	MGI_C57BL6J_2385330	Slc29a4	NCBI_Gene:243328,ENSEMBL:ENSMUSG00000050822	MGI:2385330	protein coding gene	solute carrier family 29 (nucleoside transporters), member 4
5	gene	142.72460	142.82271	negative	MGI_C57BL6J_3648294	Tnrc18	NCBI_Gene:231861,ENSEMBL:ENSMUSG00000039477	MGI:3648294	protein coding gene	trinucleotide repeat containing 18
5	gene	142.73407	142.73507	positive	MGI_C57BL6J_1913953	4921504P13Rik	NA	NA	unclassified gene	RIKEN cDNA 4921504P13 gene
5	gene	142.81178	142.81600	positive	MGI_C57BL6J_5590524	Gm31365	NCBI_Gene:102633573	MGI:5590524	lncRNA gene	predicted gene, 31365
5	pseudogene	142.85236	142.85414	negative	MGI_C57BL6J_3783212	Gm15770	NCBI_Gene:666788,ENSEMBL:ENSMUSG00000082308	MGI:3783212	pseudogene	predicted gene 15770
5	gene	142.86695	142.89542	negative	MGI_C57BL6J_2444450	Fbxl18	NCBI_Gene:231863,ENSEMBL:ENSMUSG00000066640	MGI:2444450	protein coding gene	F-box and leucine-rich repeat protein 18
5	gene	142.87408	142.87837	negative	MGI_C57BL6J_3045245	D430018E03Rik	ENSEMBL:ENSMUSG00000097559	MGI:3045245	lncRNA gene	RIKEN cDNA D430018E03 gene
5	gene	142.89540	142.89792	positive	MGI_C57BL6J_5621618	Gm38733	NCBI_Gene:105242554	MGI:5621618	lncRNA gene	predicted gene, 38733
5	gene	142.90312	142.90675	negative	MGI_C57BL6J_87904	Actb	NCBI_Gene:11461,ENSEMBL:ENSMUSG00000029580	MGI:87904	protein coding gene	actin, beta
5	gene	142.96034	142.97319	positive	MGI_C57BL6J_1352745	Fscn1	NCBI_Gene:14086,ENSEMBL:ENSMUSG00000029581	MGI:1352745	protein coding gene	fascin actin-bundling protein 1
5	gene	142.99089	143.11310	negative	MGI_C57BL6J_1344349	Rnf216	NCBI_Gene:108086,ENSEMBL:ENSMUSG00000045078	MGI:1344349	protein coding gene	ring finger protein 216
5	gene	143.04946	143.05004	negative	MGI_C57BL6J_5663515	Gm43378	ENSEMBL:ENSMUSG00000106543	MGI:5663515	lncRNA gene	predicted gene 43378
5	pseudogene	143.06765	143.06787	positive	MGI_C57BL6J_5663517	Gm43380	ENSEMBL:ENSMUSG00000105714	MGI:5663517	pseudogene	predicted gene 43380
5	gene	143.13313	143.13390	positive	MGI_C57BL6J_5621619	Gm38734	NCBI_Gene:105242555	MGI:5621619	lncRNA gene	predicted gene, 38734
5	pseudogene	143.13401	143.14758	negative	MGI_C57BL6J_3030552	Olfr718-ps1	NCBI_Gene:258006,ENSEMBL:ENSMUSG00000090981	MGI:3030552	pseudogene	olfactory receptor 718, pseudogene 1
5	pseudogene	143.15713	143.15963	negative	MGI_C57BL6J_3779716	Gm7291	NCBI_Gene:640324,ENSEMBL:ENSMUSG00000105901	MGI:3779716	pseudogene	predicted gene 7291
5	gene	143.15718	143.15730	positive	MGI_C57BL6J_5690797	Gm44405	ENSEMBL:ENSMUSG00000104836	MGI:5690797	miRNA gene	predicted gene, 44405
5	gene	143.16478	143.16575	negative	MGI_C57BL6J_3782099	Rbakdn	NCBI_Gene:100042605,ENSEMBL:ENSMUSG00000104529	MGI:3782099	lncRNA gene	RB-associated KRAB zinc finger downstream neighbor (non-protein coding)
5	gene	143.17218	143.18085	negative	MGI_C57BL6J_1927369	Rbak	NCBI_Gene:57782,ENSEMBL:ENSMUSG00000061898	MGI:1927369	protein coding gene	RB-associated KRAB zinc finger
5	gene	143.18092	143.20507	positive	MGI_C57BL6J_3612701	Spdye4b	NCBI_Gene:330228,ENSEMBL:ENSMUSG00000029586	MGI:3612701	protein coding gene	speedy/RINGO cell cycle regulator family, member E4B
5	gene	143.21632	143.22690	negative	MGI_C57BL6J_1921923	Spdye4a	NCBI_Gene:74673,ENSEMBL:ENSMUSG00000039296	MGI:1921923	protein coding gene	speedy/RINGO cell cycle regulator family, member E4A
5	gene	143.22699	143.23475	positive	MGI_C57BL6J_1922122	4930448H16Rik	NCBI_Gene:74872,ENSEMBL:ENSMUSG00000089879	MGI:1922122	lncRNA gene	RIKEN cDNA 4930448H16 gene
5	gene	143.22843	143.23505	negative	MGI_C57BL6J_5621620	Gm38735	NCBI_Gene:105242556	MGI:5621620	lncRNA gene	predicted gene, 38735
5	gene	143.23516	143.24883	positive	MGI_C57BL6J_99157	Zfp12	NCBI_Gene:231866,ENSEMBL:ENSMUSG00000029587	MGI:99157	protein coding gene	zinc finger protein 12
5	gene	143.24970	143.27002	negative	MGI_C57BL6J_1860402	Zfp316	NCBI_Gene:54201,ENSEMBL:ENSMUSG00000046658	MGI:1860402	protein coding gene	zinc finger protein 316
5	gene	143.27007	143.27251	positive	MGI_C57BL6J_2679267	BC030343	ENSEMBL:ENSMUSG00000105345	MGI:2679267	lncRNA gene	cDNA sequence BC030343
5	gene	143.28600	143.29480	negative	MGI_C57BL6J_2685638	Zfp853	NCBI_Gene:330230,ENSEMBL:ENSMUSG00000093910	MGI:2685638	protein coding gene	zinc finger protein 853
5	gene	143.30107	143.31536	negative	MGI_C57BL6J_2442621	E130309D02Rik	NCBI_Gene:231868,ENSEMBL:ENSMUSG00000039244	MGI:2442621	protein coding gene	RIKEN cDNA E130309D02 gene
5	gene	143.31484	143.31586	positive	MGI_C57BL6J_5662638	Gm42501	ENSEMBL:ENSMUSG00000105609	MGI:5662638	unclassified gene	predicted gene 42501
5	gene	143.31649	143.32926	negative	MGI_C57BL6J_1920131	Zdhhc4	NCBI_Gene:72881,ENSEMBL:ENSMUSG00000001844	MGI:1920131	protein coding gene	zinc finger, DHHC domain containing 4
5	gene	143.32925	143.33270	positive	MGI_C57BL6J_1914922	0610040B10Rik	NCBI_Gene:67672,ENSEMBL:ENSMUSG00000089889	MGI:1914922	lncRNA gene	RIKEN cDNA 0610040B10 gene
5	gene	143.33463	143.33542	positive	MGI_C57BL6J_5663534	Gm43397	ENSEMBL:ENSMUSG00000104875	MGI:5663534	lncRNA gene	predicted gene 43397
5	gene	143.35734	143.39215	positive	MGI_C57BL6J_2176213	Grid2ip	NCBI_Gene:170935,ENSEMBL:ENSMUSG00000010825	MGI:2176213	protein coding gene	glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
5	gene	143.37321	143.37525	negative	MGI_C57BL6J_5621621	Gm38736	NCBI_Gene:105242558	MGI:5621621	lncRNA gene	predicted gene, 38736
5	gene	143.39073	143.40375	negative	MGI_C57BL6J_5313082	Gm20635	NCBI_Gene:105242557,ENSEMBL:ENSMUSG00000093720	MGI:5313082	lncRNA gene	predicted gene 20635
5	gene	143.39369	143.39746	negative	MGI_C57BL6J_5662641	Gm42504	ENSEMBL:ENSMUSG00000106198	MGI:5662641	lncRNA gene	predicted gene 42504
5	gene	143.39550	143.39824	positive	MGI_C57BL6J_5663535	Gm43398	ENSEMBL:ENSMUSG00000105594	MGI:5663535	unclassified gene	predicted gene 43398
5	gene	143.39725	143.39956	negative	MGI_C57BL6J_2444456	9530056K15Rik	ENSEMBL:ENSMUSG00000045345	MGI:2444456	unclassified gene	RIKEN cDNA 9530056K15 gene
5	gene	143.40382	143.42190	positive	MGI_C57BL6J_1914163	Kdelr2	NCBI_Gene:66913,ENSEMBL:ENSMUSG00000079111	MGI:1914163	protein coding gene	KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
5	pseudogene	143.43827	143.43974	positive	MGI_C57BL6J_3779442	Gm4870	NCBI_Gene:231869,ENSEMBL:ENSMUSG00000105206	MGI:3779442	pseudogene	predicted gene 4870
5	pseudogene	143.45675	143.45744	positive	MGI_C57BL6J_3779907	Gm9497	NCBI_Gene:670671,ENSEMBL:ENSMUSG00000106068	MGI:3779907	pseudogene	predicted gene 9497
5	gene	143.46449	143.50594	positive	MGI_C57BL6J_2442032	Daglb	NCBI_Gene:231871,ENSEMBL:ENSMUSG00000039206	MGI:2442032	protein coding gene	diacylglycerol lipase, beta
5	gene	143.50363	143.52812	negative	MGI_C57BL6J_97845	Rac1	NCBI_Gene:19353,ENSEMBL:ENSMUSG00000001847	MGI:97845	protein coding gene	Rac family small GTPase 1
5	gene	143.52566	143.52675	positive	MGI_C57BL6J_5662639	Gm42502	ENSEMBL:ENSMUSG00000105198	MGI:5662639	unclassified gene	predicted gene 42502
5	gene	143.54871	143.56453	positive	MGI_C57BL6J_1914488	Fam220a	NCBI_Gene:67238,ENSEMBL:ENSMUSG00000083012,ENSEMBL:ENSMUSG00000118332	MGI:1914488	protein coding gene	family with sequence similarity 220, member A
5	gene	143.62245	143.71025	positive	MGI_C57BL6J_1335107	Cyth3	NCBI_Gene:19159,ENSEMBL:ENSMUSG00000018001	MGI:1335107	protein coding gene	cytohesin 3
5	gene	143.71033	143.75979	negative	MGI_C57BL6J_1924050	Usp42	NCBI_Gene:76800,ENSEMBL:ENSMUSG00000051306	MGI:1924050	protein coding gene	ubiquitin specific peptidase 42
5	gene	143.73245	143.73546	positive	MGI_C57BL6J_5621622	Gm38737	NCBI_Gene:105242559	MGI:5621622	lncRNA gene	predicted gene, 38737
5	gene	143.75835	143.76857	positive	MGI_C57BL6J_2443273	D130017N08Rik	NCBI_Gene:320064,ENSEMBL:ENSMUSG00000097287	MGI:2443273	lncRNA gene	RIKEN cDNA D130017N08 gene
5	gene	143.77004	143.77374	positive	MGI_C57BL6J_5662640	Gm42503	ENSEMBL:ENSMUSG00000104708	MGI:5662640	unclassified gene	predicted gene 42503
5	gene	143.81779	143.90425	positive	MGI_C57BL6J_1353448	Eif2ak1	NCBI_Gene:15467,ENSEMBL:ENSMUSG00000029613	MGI:1353448	protein coding gene	eukaryotic translation initiation factor 2 alpha kinase 1
5	gene	143.89064	143.89768	negative	MGI_C57BL6J_1913979	Ankrd61	NCBI_Gene:66729,ENSEMBL:ENSMUSG00000029607	MGI:1913979	protein coding gene	ankyrin repeat domain 61
5	gene	143.90270	143.90985	negative	MGI_C57BL6J_2385237	Aimp2	NCBI_Gene:231872,ENSEMBL:ENSMUSG00000029610	MGI:2385237	protein coding gene	aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
5	gene	143.90990	143.98572	positive	MGI_C57BL6J_104288	Pms2	NCBI_Gene:18861,ENSEMBL:ENSMUSG00000079109	MGI:104288	protein coding gene	PMS1 homolog2, mismatch repair system component
5	gene	143.92258	143.98121	negative	MGI_C57BL6J_4937962	Gm17135	NCBI_Gene:108169081,ENSEMBL:ENSMUSG00000091351	MGI:4937962	lncRNA gene	predicted gene 17135
5	gene	143.92818	143.93731	positive	MGI_C57BL6J_5649069	Gm42421	ENSEMBL:ENSMUSG00000104633	MGI:5649069	protein coding gene	predicted gene, 42421
5	gene	143.93303	143.98572	positive	MGI_C57BL6J_1922386	Rsph10b	ENSEMBL:ENSMUSG00000075569	MGI:1922386	protein coding gene	radial spoke head 10 homolog B (Chlamydomonas)
5	gene	143.98791	144.01488	negative	MGI_C57BL6J_2141070	Ccz1	NCBI_Gene:231874,ENSEMBL:ENSMUSG00000029617	MGI:2141070	protein coding gene	CCZ1 vacuolar protein trafficking and biogenesis associated
5	gene	144.01400	144.01410	positive	MGI_C57BL6J_5454088	Gm24311	ENSEMBL:ENSMUSG00000093856	MGI:5454088	snRNA gene	predicted gene, 24311
5	gene	144.01516	144.01716	positive	MGI_C57BL6J_5592586	Gm33427	NCBI_Gene:102636328	MGI:5592586	lncRNA gene	predicted gene, 33427
5	gene	144.01980	144.05064	negative	MGI_C57BL6J_97401	Ocm	NCBI_Gene:18261,ENSEMBL:ENSMUSG00000029618	MGI:97401	protein coding gene	oncomodulin
5	pseudogene	144.06742	144.06919	negative	MGI_C57BL6J_5663752	Gm43615	ENSEMBL:ENSMUSG00000105150	MGI:5663752	pseudogene	predicted gene 43615
5	gene	144.10037	144.18820	positive	MGI_C57BL6J_3036247	Lmtk2	NCBI_Gene:231876,ENSEMBL:ENSMUSG00000038970	MGI:3036247	protein coding gene	lemur tyrosine kinase 2
5	pseudogene	144.11082	144.11177	negative	MGI_C57BL6J_5504040	Gm26925	ENSEMBL:ENSMUSG00000098039	MGI:5504040	pseudogene	predicted gene, 26925
5	gene	144.19022	144.19444	positive	MGI_C57BL6J_891976	Bhlha15	NCBI_Gene:17341,ENSEMBL:ENSMUSG00000052271	MGI:891976	protein coding gene	basic helix-loop-helix family, member a15
5	gene	144.19444	144.22361	negative	MGI_C57BL6J_1917631	Tecpr1	NCBI_Gene:70381,ENSEMBL:ENSMUSG00000066621	MGI:1917631	protein coding gene	tectonin beta-propeller repeat containing 1
5	gene	144.22373	144.22552	positive	MGI_C57BL6J_5663404	Gm43267	ENSEMBL:ENSMUSG00000104662	MGI:5663404	unclassified gene	predicted gene 43267
5	gene	144.24169	144.25620	negative	MGI_C57BL6J_1914527	2900089D17Rik	NCBI_Gene:67277,ENSEMBL:ENSMUSG00000087484	MGI:1914527	lncRNA gene	RIKEN cDNA 2900089D17 gene
5	gene	144.24444	144.44676	positive	MGI_C57BL6J_1933174	Bri3	NCBI_Gene:55950,ENSEMBL:ENSMUSG00000047843	MGI:1933174	protein coding gene	brain protein I3
5	gene	144.24679	144.24776	negative	MGI_C57BL6J_1924970	6720454L20Rik	NA	NA	unclassified gene	RIKEN cDNA 6720454L20 gene
5	gene	144.25622	144.26382	positive	MGI_C57BL6J_5621560	Gm38675	NCBI_Gene:105242391	MGI:5621560	lncRNA gene	predicted gene, 38675
5	gene	144.26452	144.35811	negative	MGI_C57BL6J_1914148	Baiap2l1	NCBI_Gene:66898,ENSEMBL:ENSMUSG00000038859	MGI:1914148	protein coding gene	BAI1-associated protein 2-like 1
5	gene	144.27706	144.28051	positive	MGI_C57BL6J_3783149	Gm15708	NCBI_Gene:100504231,ENSEMBL:ENSMUSG00000086894	MGI:3783149	lncRNA gene	predicted gene 15708
5	gene	144.35792	144.36105	positive	MGI_C57BL6J_4887388	Dmrt1i	NCBI_Gene:100579137,ENSEMBL:ENSMUSG00000104600	MGI:4887388	lncRNA gene	Dmrt1 interacting ncRNA
5	pseudogene	144.40660	144.40681	positive	MGI_C57BL6J_3783150	Gm15709	ENSEMBL:ENSMUSG00000083574	MGI:3783150	pseudogene	predicted gene 15709
5	gene	144.42300	144.42723	negative	MGI_C57BL6J_5592711	Gm33552	NCBI_Gene:102636505	MGI:5592711	lncRNA gene	predicted gene, 33552
5	gene	144.46591	144.47980	negative	MGI_C57BL6J_5592873	Gm33714	NCBI_Gene:102636721	MGI:5592873	lncRNA gene	predicted gene, 33714
5	gene	144.49510	144.52014	negative	MGI_C57BL6J_5592924	Gm33765	NCBI_Gene:102636791	MGI:5592924	lncRNA gene	predicted gene, 33765
5	gene	144.54489	144.54576	negative	MGI_C57BL6J_1923123	4930568B11Rik	NA	NA	unclassified gene	RIKEN cDNA 4930568B11 gene
5	gene	144.54589	144.55748	positive	MGI_C57BL6J_1858209	Nptx2	NCBI_Gene:53324,ENSEMBL:ENSMUSG00000059991	MGI:1858209	protein coding gene	neuronal pentraxin 2
5	pseudogene	144.72359	144.72383	negative	MGI_C57BL6J_3643871	Gm6272	NCBI_Gene:108169117,ENSEMBL:ENSMUSG00000082524	MGI:3643871	pseudogene	predicted pseudogene 6272
5	gene	144.73592	144.76182	negative	MGI_C57BL6J_3607706	Tmem130	NCBI_Gene:243339,ENSEMBL:ENSMUSG00000043388	MGI:3607706	protein coding gene	transmembrane protein 130
5	gene	144.76171	144.76422	positive	MGI_C57BL6J_5621624	Gm38739	NCBI_Gene:105242562	MGI:5621624	lncRNA gene	predicted gene, 38739
5	gene	144.76773	144.85978	positive	MGI_C57BL6J_2153272	Trrap	NCBI_Gene:100683,ENSEMBL:ENSMUSG00000045482	MGI:2153272	protein coding gene	transformation/transcription domain-associated protein
5	gene	144.77443	144.77455	positive	MGI_C57BL6J_5453772	Gm23995	ENSEMBL:ENSMUSG00000088685	MGI:5453772	snoRNA gene	predicted gene, 23995
5	gene	144.87650	144.96585	negative	MGI_C57BL6J_1923038	Smurf1	NCBI_Gene:75788,ENSEMBL:ENSMUSG00000038780	MGI:1923038	protein coding gene	SMAD specific E3 ubiquitin protein ligase 1
5	gene	144.89673	144.89682	negative	MGI_C57BL6J_5531206	Mir7039	miRBase:MI0022888,NCBI_Gene:102465629,ENSEMBL:ENSMUSG00000098822	MGI:5531206	miRNA gene	microRNA 7039
5	gene	144.91845	144.92277	positive	MGI_C57BL6J_5592980	Gm33821	NCBI_Gene:102636868	MGI:5592980	lncRNA gene	predicted gene, 33821
5	gene	144.98352	145.08403	negative	MGI_C57BL6J_2141165	Kpna7	NCBI_Gene:381686,ENSEMBL:ENSMUSG00000038770	MGI:2141165	protein coding gene	karyopherin alpha 7 (importin alpha 8)
5	gene	145.00795	145.02025	positive	MGI_C57BL6J_5593063	Gm33904	NCBI_Gene:102636982	MGI:5593063	lncRNA gene	predicted gene, 33904
5	pseudogene	145.02018	145.02102	positive	MGI_C57BL6J_5663700	Gm43563	ENSEMBL:ENSMUSG00000105177	MGI:5663700	pseudogene	predicted gene 43563
5	gene	145.02960	145.03276	negative	MGI_C57BL6J_3648713	Gm4871	NCBI_Gene:231885,ENSEMBL:ENSMUSG00000061707	MGI:3648713	protein coding gene	predicted gene 4871
5	gene	145.03284	145.03346	positive	MGI_C57BL6J_5663699	Gm43562	ENSEMBL:ENSMUSG00000106393	MGI:5663699	lncRNA gene	predicted gene 43562
5	pseudogene	145.03537	145.03582	negative	MGI_C57BL6J_5663698	Gm43561	ENSEMBL:ENSMUSG00000105024	MGI:5663698	pseudogene	predicted gene 43561
5	gene	145.04295	145.04568	positive	MGI_C57BL6J_1916646	1700018F24Rik	NCBI_Gene:69396,ENSEMBL:ENSMUSG00000029620	MGI:1916646	protein coding gene	RIKEN cDNA 1700018F24 gene
5	pseudogene	145.06752	145.06768	positive	MGI_C57BL6J_6324723	Gm50458	ENSEMBL:ENSMUSG00000118480	MGI:6324723	pseudogene	predicted gene, 50458
5	gene	145.08383	145.10876	positive	MGI_C57BL6J_1928896	Arpc1a	NCBI_Gene:56443,ENSEMBL:ENSMUSG00000029621	MGI:1928896	protein coding gene	actin related protein 2/3 complex, subunit 1A
5	gene	145.11422	145.13071	positive	MGI_C57BL6J_1343142	Arpc1b	NCBI_Gene:11867,ENSEMBL:ENSMUSG00000029622	MGI:1343142	protein coding gene	actin related protein 2/3 complex, subunit 1B
5	gene	145.12877	145.14024	negative	MGI_C57BL6J_2448536	Pdap1	NCBI_Gene:231887,ENSEMBL:ENSMUSG00000029623	MGI:2448536	protein coding gene	PDGFA associated protein 1
5	gene	145.14036	145.14808	positive	MGI_C57BL6J_2141291	Bud31	NCBI_Gene:231889,ENSEMBL:ENSMUSG00000038722	MGI:2141291	protein coding gene	BUD31 homolog
5	gene	145.14738	145.16711	negative	MGI_C57BL6J_1919049	Ptcd1	NCBI_Gene:71799,ENSEMBL:ENSMUSG00000029624	MGI:1919049	protein coding gene	pentatricopeptide repeat domain 1
5	gene	145.16721	145.18204	positive	MGI_C57BL6J_1861602	Cpsf4	NCBI_Gene:54188,ENSEMBL:ENSMUSG00000029625	MGI:1861602	protein coding gene	cleavage and polyadenylation specific factor 4
5	gene	145.18370	145.19206	negative	MGI_C57BL6J_1927558	Atp5j2	NCBI_Gene:57423,ENSEMBL:ENSMUSG00000038690	MGI:1927558	protein coding gene	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
5	gene	145.19495	145.20417	negative	MGI_C57BL6J_1914485	Zkscan14	NCBI_Gene:67235,ENSEMBL:ENSMUSG00000029627	MGI:1914485	protein coding gene	zinc finger with KRAB and SCAN domains 14
5	gene	145.20446	145.22175	positive	MGI_C57BL6J_107533	Zkscan5	NCBI_Gene:22757,ENSEMBL:ENSMUSG00000055991	MGI:107533	protein coding gene	zinc finger with KRAB and SCAN domains 5
5	gene	145.23051	145.23229	negative	MGI_C57BL6J_3643197	Gm6287	NA	NA	unclassified gene	predicted gene 6287
5	gene	145.23172	145.24731	positive	MGI_C57BL6J_1919861	Zfp655	NCBI_Gene:72611,ENSEMBL:ENSMUSG00000007812	MGI:1919861	protein coding gene	zinc finger protein 655
5	pseudogene	145.26567	145.26690	negative	MGI_C57BL6J_3780118	Gm9710	NCBI_Gene:677270,ENSEMBL:ENSMUSG00000106188	MGI:3780118	pseudogene	predicted gene 9710
5	gene	145.27951	145.28062	negative	MGI_C57BL6J_5621625	Gm38740	NCBI_Gene:105242563	MGI:5621625	lncRNA gene	predicted gene, 38740
5	gene	145.28048	145.29149	positive	MGI_C57BL6J_3647079	Zscan25	NCBI_Gene:666311,ENSEMBL:ENSMUSG00000070420	MGI:3647079	protein coding gene	zinc finger and SCAN domain containing 25
5	gene	145.29277	145.29501	positive	MGI_C57BL6J_5662773	Gm42636	ENSEMBL:ENSMUSG00000104682	MGI:5662773	unclassified gene	predicted gene 42636
5	gene	145.34515	145.39093	positive	MGI_C57BL6J_3646373	Cyp3a57	NCBI_Gene:622127,ENSEMBL:ENSMUSG00000070419	MGI:3646373	protein coding gene	cytochrome P450, family 3, subfamily a, polypeptide 57
5	pseudogene	145.40087	145.40145	positive	MGI_C57BL6J_3780485	Gm2314	NCBI_Gene:100039566,ENSEMBL:ENSMUSG00000104644	MGI:3780485	pseudogene	predicted gene 2314
5	pseudogene	145.40965	145.40984	positive	MGI_C57BL6J_5662996	Gm42859	ENSEMBL:ENSMUSG00000105764	MGI:5662996	pseudogene	predicted gene 42859
5	gene	145.43631	145.46974	negative	MGI_C57BL6J_106099	Cyp3a16	NCBI_Gene:13114,ENSEMBL:ENSMUSG00000038656	MGI:106099	protein coding gene	cytochrome P450, family 3, subfamily a, polypeptide 16
5	pseudogene	145.49042	145.49197	negative	MGI_C57BL6J_5434371	Gm21016	NCBI_Gene:100534292	MGI:5434371	pseudogene	predicted gene, 21016
5	pseudogene	145.49261	145.53263	positive	MGI_C57BL6J_5295682	Cyp3a58-ps	NCBI_Gene:100125872	MGI:5295682	pseudogene	cytochrome P450, family 3, subfamily a, member 58, pseudogene
5	gene	145.50410	145.50705	negative	MGI_C57BL6J_5663000	Gm42863	ENSEMBL:ENSMUSG00000105270	MGI:5663000	unclassified gene	predicted gene 42863
5	gene	145.55866	145.58473	negative	MGI_C57BL6J_3714859	Cyp3a41b	NCBI_Gene:100041375,ENSEMBL:ENSMUSG00000075552	MGI:3714859	protein coding gene	cytochrome P450, family 3, subfamily a, polypeptide 41B
5	pseudogene	145.59580	145.59596	negative	MGI_C57BL6J_5663518	Gm43381	ENSEMBL:ENSMUSG00000106033	MGI:5663518	pseudogene	predicted gene 43381

R/qtl

scanone

gm

Object of class cross2 (crosstype "bc")

Total individuals               138
No. genotyped individuals       138
No. phenotyped individuals      138
No. with both geno & pheno      138

No. phenotypes                    1
No. covariates                    7
No. phenotype covariates          0

No. chromosomes                  20
Total markers                131355

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
9956 9987 7848 7585 7609 7736 7399 6458 6713 6385 7143 6110 6082 5966 5346 5015 
  17   18   19    X 
5080 4605 3562 4770 

#detach("package:qtl2", unload=TRUE)
#library(qtl)

cross <- qtl::read.cross("csv", file = "data/ici.vs.pbs_gm_qtl_5.batches_mis_conditional_2-peaks-chr4-10.csv",alleles=c("A","B"))

 --Read the following data:
     138  individuals
     131355  markers
     5  phenotypes
 --Cross type: bc 

cross <- qtl::jittermap(cross)

summary(cross)

    Backcross

    No. individuals:    138 

    No. phenotypes:     5 
    Percent phenotyped: 100 100 100 98.6 98.6 

    No. chromosomes:    20 
        Autosomes:      1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 
        X chr:          X 

    Total markers:      131355 
    No. markers:        9956 9987 7848 7585 7609 7736 7399 6458 6713 6385 7143 
                        6110 6082 5966 5346 5015 5080 4605 3562 4770 
    Percent genotyped:  99.5 
    Genotypes (%):    
          Autosomes:    AA:88.1  AB:11.9 
       X chromosome:    AA:93.9  AB:6.1  

cross.probs <- qtl::calc.genoprob(cross)

print("method == hk")

[1] "method == hk"

add.covars = qtl::pull.pheno(cross.probs, c("UNC8250659","UNC18240977"))

scanone.hk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.PBS" , model="binary", method="hk", addcovar = add.covars)
operm.hk <- qtl::scanone(cross.probs, method = "hk", pheno.col="ICI.vs.PBS", n.perm = 10, perm.Xsp = TRUE, model="binary", verbose=FALSE, addcovar = add.covars)
plot(operm.hk)

print(summary(operm.hk, alpha=c(0.01,  0.05, 0.1)))

Autosome LOD thresholds (10 permutations)
     lod
1%  3.33
5%  3.28
10% 3.21

X chromosome LOD thresholds (182 permutations)
     lod
1%  3.39
5%  3.29
10% 3.17

#plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- maxlod(out) # overall maximum LOD score
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]")) 
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

ymx <- 14
plot(scanone.hk, bandcol = "grey90",lty=1, cex=1, col = "slateblue", ylim=c(0, ymx+0.5))
title(main = paste0(colnames(out), " [positions in cM]\n(using same scale as ici vs. eoi for easier comparison)"))
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.01, col = 'blue')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.05, col = 'red')
qtl::add.threshold(scanone.hk,  perms= operm.hk, alpha=0.1, col = 'purple')

print(as.data.frame(summary(scanone.hk, perms=operm.hk, pvalues=TRUE, format="allpeaks")))

            chr       pos      lod      pval
UNC1197721    1 47.673577 1.868502 1.0000000
UNCHS005266   2 40.908610 1.873368 1.0000000
UNC6045859    3 50.620447 1.870152 1.0000000
JAX00123711   4 53.542073 1.799165 1.0000000
JAX00574407   5  6.213413 3.388862 0.0000000
UNCHS017906   6 37.001766 1.868162 1.0000000
JAX00233659   7 87.998157 1.870072 1.0000000
JAX00667121   8 24.443849 2.382541 0.6196652
UNC17203329   9 68.519175 1.323467 1.0000000
JAX00302150  10 74.547218 2.532706 0.5187088
UNC20281687  11 67.380801 1.859331 1.0000000
UNCHS034188  12 38.836978 1.870151 1.0000000
JAX00350973  13  5.743505 1.378528 1.0000000
JAX00380911  14 30.154517 2.381660 0.6196652
UNC25275535  15 11.968141 1.402063 1.0000000
UNC26790882  16 30.832641 2.019242 0.9118988
UNCHS045288  17 60.699043 2.034920 0.9118988
JAX00450853  18  2.913076 2.621475 0.5187088
UNCHS047190  19  8.712408 1.804318 1.0000000
XiB2          X 45.699951 1.870087 0.9996602

print("all peaks with a p-value less or equal to 0.05 (suggestive)")

[1] "all peaks with a p-value less or equal to 0.05 (suggestive)"

print(as.data.frame(summary(scanone.hk, perms=operm.hk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

            chr      pos      lod pval
JAX00574407   5 6.213413 3.388862    0

#print("method == ehk")

#scanone.ehk <-qtl::scanone(cross.probs, pheno.col="ICI.vs.PBS" , model="binary", method="ehk")
#operm.ehk <- qtl::scanone(cross.probs, method = "ehk", pheno.col="ICI.vs.PBS", n.perm = 10, perm.Xsp = TRUE, model="binary", verbose=FALSE)
#plot(operm.ehk)
#print(summary(operm.ehk, alpha=c(0.01,  0.05, 0.1)))

#plot(scanone.ehk, bandcol = "grey90",lty=1, cex=1, col = "steelblue")  
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.01, col = 'blue')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.05, col = 'red')
#qtl::add.threshold(scanone.ehk,  perms= operm.ehk, alpha=0.1, col = 'purple')

#print(as.data.frame(summary(scanone.ehk)))
#print(as.data.frame(summary(scanone.ehk, perms=operm.ehk, alpha=0.05, pvalues=TRUE, format="allpeaks")))

Session information

R version 3.5.1 (2018-07-02)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS  10.15.7

Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib

locale:
[1] en_AU.UTF-8/en_AU.UTF-8/en_AU.UTF-8/C/en_AU.UTF-8/en_AU.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] abind_1.4-5       qtl2_0.22         reshape2_1.4.3    ggplot2_3.3.6    
 [5] tibble_3.1.7      psych_2.2.5       readxl_1.4.0      cluster_2.0.7-1  
 [9] dplyr_1.0.9       optparse_1.6.6    rhdf5_2.26.2      mclust_5.4.5     
[13] tidyr_1.2.0       data.table_1.14.2 knitr_1.29        kableExtra_1.3.4 
[17] workflowr_1.6.2  

loaded via a namespace (and not attached):
 [1] httr_1.4.3        bit64_0.9-7       viridisLite_0.3.0 assertthat_0.2.1 
 [5] highr_0.8         blob_1.2.1        cellranger_1.1.0  yaml_2.2.1       
 [9] gdtools_0.2.1     pillar_1.7.0      RSQLite_2.2.0     backports_1.1.5  
[13] lattice_0.20-35   glue_1.6.2        digest_0.6.25     promises_1.1.0   
[17] rvest_1.0.2       colorspace_1.4-1  htmltools_0.5.2   httpuv_1.5.2     
[21] plyr_1.8.6        pkgconfig_2.0.3   purrr_0.3.4       scales_1.1.1     
[25] webshot_0.5.3     svglite_1.2.3     qtl_1.46-2        getopt_1.20.3    
[29] later_1.0.0       git2r_0.26.1      generics_0.0.2    ellipsis_0.3.2   
[33] withr_2.5.0       cli_3.3.0         mnormt_1.5-6      magrittr_2.0.3   
[37] crayon_1.5.1      memoise_1.1.0     evaluate_0.14     fs_1.3.2         
[41] fansi_0.4.1       nlme_3.1-137      xml2_1.3.2        tools_3.5.1      
[45] lifecycle_1.0.1   stringr_1.4.0     Rhdf5lib_1.4.3    munsell_0.5.0    
[49] compiler_3.5.1    systemfonts_0.1.1 rlang_1.0.3       grid_3.5.1       
[53] rstudioapi_0.13   rmarkdown_2.3     gtable_0.3.0      DBI_1.1.0        
[57] R6_2.4.1          fastmap_1.1.0     bit_1.1-15.2      utf8_1.1.4       
[61] rprojroot_1.3-2   stringi_1.4.6     parallel_3.5.1    Rcpp_1.0.4.6     
[65] vctrs_0.4.1       tidyselect_1.1.2  xfun_0.15