QTL Analysis - age of onset [ICI vs EOI] (corrected phenotype with outliers removed if any)

workflowr

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Last updated: 2022-04-14

Checks: 5 2

Knit directory: Serreze-T1D_Workflow/

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Repository version: a8c2d1a

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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-11_peak.marker-UNC19970181_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-11_peak.marker-UNC20090524_lod.drop-1.5_snpsqc_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-12_peak.marker-ICR499_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-12_peak.marker-ICR499_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-13_peak.marker-UNCHS036773_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-14_peak.marker-UNC24056202_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-17_peak.marker-UNCJPD006614_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-17_peak.marker-UNCrs47191360_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-18_peak.marker-UNCHS045343_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-18_peak.marker-UNCHS045343_lod.drop-1.5_snpsqc_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-2_peak.marker-UNC4609527_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008219_lod.drop-1.5_5.batches_mis.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008229_lod.drop-1.5_5.batches_mis.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008271_lod.drop-1.5_5.batches_mis.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008432_lod.drop-1.5_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008511_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_age.of.onset-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008627_lod.drop-1.5_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_52.csv
    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008487_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-3_peak.marker-UNCHS008511_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-7_peak.marker-UNCHS020066_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-7_peak.marker-UNCHS020066_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-7_peak.marker-UNCHS020066_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-8_peak.marker-UNC15524531_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-8_peak.marker-UNC15524531_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_0.csv
    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-8_peak.marker-UNC15524531_lod.drop-1.5_snpsqc_dis_no-x_updated_5.batches_mis_52.csv
    Untracked:  data/ici.vs.eoi_rz.age-no.covariates_blup_sub_chr-9_peak.marker-UNC17203597_lod.drop-1.5_snpsqc_5.batches_mis_0.csv
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Unstaged changes:
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici.vs.eoi_snpsqc_dis_no-x_updated.Rmd
    Modified:   analysis/4.1.1_qtl.analysis_binary_ici.vs.pbs_snpsqc_dis_no-x_updated.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
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    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici-early.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
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    Modified:   analysis/4.1.2_qtl.analysis_cont_age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici-early.vs.pbs_pheno.corrected.cleaned_5.batches_mis.Rmd
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    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_5.batches_mis.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches.Rmd
    Modified:   analysis/4.1.2_qtl.analysis_cont_rz.age_ici.vs.pbs_snpsqc_pheno.corrected.cleaned_dis_no-xk_5.batches_mis.Rmd
    Modified:   analysis/index_5.batches.Rmd
    Modified:   analysis/index_5.batches_additional.Rmd

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

---

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches.Rmd) and HTML (docs/4.1.2_qtl.analysis_cont_age_ici.vs.eoi_snpsqc_pheno.corrected.cleaned_5.batches.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File	Version	Author	Date	Message
Rmd	a8c2d1a	Belinda Cornes	2022-04-13	additonal analysis - peaks and continuous variables
html	a8c2d1a	Belinda Cornes	2022-04-13	additonal analysis - peaks and continuous variables

---

Loading Data

load("data/gm_allqc_5.batches.RData")

#gm_allqc
gm=gm_allqc
gm

Object of class cross2 (crosstype "bc")

Total individuals              308
No. genotyped individuals      308
No. phenotyped individuals     308
No. with both geno & pheno     308

No. phenotypes                   1
No. covariates                   6
No. phenotype covariates         0

No. chromosomes                 20
Total markers                34537

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2643 2629 1857 1890 1774 1941 1672 1627 1878 1176 1871 1300 1549 1578 1257  935 
  17   18   19    X 
 501  913 1014 4532 

#pr <- readRDS("data/serreze_probs_allqc.rds")
#pr <- readRDS("data/serreze_probs.rds")

##extracting animals with ici and eoi group status
miceinfo <- gm$covar[gm$covar$group == "EOI" | gm$covar$group == "ICI",]
table(miceinfo$group)

EOI ICI 
164 104 

mice.ids <- rownames(miceinfo)

gm <- gm[mice.ids]
gm

Object of class cross2 (crosstype "bc")

Total individuals              268
No. genotyped individuals      268
No. phenotyped individuals     268
No. with both geno & pheno     268

No. phenotypes                   1
No. covariates                   6
No. phenotype covariates         0

No. chromosomes                 20
Total markers                34537

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2643 2629 1857 1890 1774 1941 1672 1627 1878 1176 1871 1300 1549 1578 1257  935 
  17   18   19    X 
 501  913 1014 4532 

table(gm$covar$group)

EOI ICI 
164 104 

gm.full <- gm

covars <- read_csv("data/covar_corrected.cleaned_ici.vs.eoi_5.batches.csv")
#removing any missing info
missing_ids <- covars[which(covars$"age.of.onset"==""),]$Mouse.ID
length(missing_ids)

[1] 3

missing_ids

[1] "NG00526-ICI-LATE" "NG00522-ICI-LATE" "NG01389-ICI-LATE"

if(length(missing_ids) != 0){
gm <- gm[paste0("-",as.character(missing_ids)),]
gm
table(gm$covar$group)

#keeping only mouseids in covars
covars <- covars[gm$covar$id,]
table(covars$group)
}

EOI ICI 
164 101 

#covars[covars$age.of.onset==0,]$age.of.onset <- ''

##removing problmetic marker
gm <- drop_markers(gm, "UNCHS013106")

query_variants <- create_variant_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/cc_variants.sqlite")
query_genes <- create_gene_query_func("/Users/corneb/Documents/MyJax/CS/Projects/support.files/qtl2/mouse_genes_mgi.sqlite")


##dropping monomorphic markers within the dataset

g <- do.call("cbind", gm$geno)
#g[1,1:ncol(g)]

gf_mar <- t(apply(g, 2, function(a) table(factor(a, 1:2))/sum(a != 0)))
#gn_mar <- t(apply(g, 2, function(a) table(factor(a, 1:2))))

gf_mar <- gf_mar[gf_mar[,2] != "NaN",]

count <- rowSums(gf_mar <=0.05)
low_freq_df <- merge(as.data.frame(gf_mar),as.data.frame(count), by="row.names",all=T)
low_freq_df[is.na(low_freq_df)] <- ''
low_freq_df <- low_freq_df[low_freq_df$count == 1,]
rownames(low_freq_df) <- low_freq_df$Row.names

low_freq <- find_markerpos(gm, rownames(low_freq_df))
low_freq$id <- rownames(low_freq)

nrow(low_freq)

[1] 8397

low_freq_bad <- merge(low_freq,low_freq_df, by="row.names",all=T)
names(low_freq_bad)[1] <- c("marker")

gf_mar <- gf_mar[gf_mar[,2] != "NaN",]
MAF <- apply(gf_mar, 1, function(x) min(x))
MAF <- as.data.frame(MAF)
MAF$index <- 1:nrow(gf_mar)
gf_mar_maf <- merge(gf_mar,as.data.frame(MAF), by="row.names")
gf_mar_maf <- gf_mar_maf[order(gf_mar_maf$index),]

gfmar <- NULL
gfmar$gfmar_mar_0 <- sum(gf_mar_maf$MAF==0)
gfmar$gfmar_mar_1 <- sum(gf_mar_maf$MAF< 0.01)
gfmar$gfmar_mar_5 <- sum(gf_mar_maf$MAF< 0.05)
gfmar$gfmar_mar_10 <- sum(gf_mar_maf$MAF< 0.10)
gfmar$gfmar_mar_15 <- sum(gf_mar_maf$MAF< 0.15)
gfmar$gfmar_mar_25 <- sum(gf_mar_maf$MAF< 0.25)
gfmar$gfmar_mar_50 <- sum(gf_mar_maf$MAF< 0.50)
gfmar$total_snps <- nrow(as.data.frame(gf_mar_maf))

gfmar <- t(as.data.frame(gfmar))
gfmar <- as.data.frame(gfmar)
gfmar$count <- gfmar$V1

gfmar[c(2)] %>%
  kable(escape = F,align = c("ccccccccc"),linesep ="\\hline") %>%
  kable_styling(full_width = F) %>%
  kable_styling("striped", full_width = F)  %>%
  row_spec(8 ,bold=T,color= "white",background = "black")

	count
gfmar_mar_0	3816
gfmar_mar_1	4125
gfmar_mar_5	8396
gfmar_mar_10	8556
gfmar_mar_15	8620
gfmar_mar_25	9026
gfmar_mar_50	34342
total_snps	34537

gm_qc <- drop_markers(gm, low_freq_bad$marker)
gm_qc <- drop_nullmarkers(gm_qc)
 
gm = gm_qc
gm

Object of class cross2 (crosstype "bc")

Total individuals              265
No. genotyped individuals      265
No. phenotyped individuals     265
No. with both geno & pheno     265

No. phenotypes                   1
No. covariates                   6
No. phenotype covariates         0

No. chromosomes                 20
Total markers                26140

No. markers by chr:
   1    2    3    4    5    6    7    8    9   10   11   12   13   14   15   16 
2336 2342 1589 1661 1536 1681 1450 1438 1654  947 1651 1107 1359 1396  945  728 
  17   18   19    X 
 303  747  903  367 

markers <- marker_names(gm)
gmapdf <- read.csv("/Users/corneb/Documents/MyJax/CS/Projects/Serreze/haplotype.reconstruction/output_5.batches/genetic_map.csv")
pmapdf <- read.csv("/Users/corneb/Documents/MyJax/CS/Projects/Serreze/haplotype.reconstruction/output_5.batches/physical_map.csv")
#mapdf <- merge(gmapdf,pmapdf, by=c("marker","chr"), all=T)
#rownames(mapdf) <- mapdf$marker
#mapdf <- mapdf[markers,]
#names(mapdf) <- c('marker','chr','gmapdf','pmapdf')
#mapdfnd <- mapdf[!duplicated(mapdf[c(2:3)]),]

pr.qc <- calc_genoprob(gm)

Preparing necessary info

covars$age.of.onset <- as.numeric(covars$age.of.onset)
Xcovar <- get_x_covar(gm)
addcovar = model.matrix(~ICI.vs.EOI, data = covars)[,-1]
#addcovar.i = model.matrix(~ICI.vs.EOI, data = covars)[,-1]

K <- calc_kinship(pr.qc, type = "loco")
#heatmap(K[[1]])
K.overall <- calc_kinship(pr.qc, type = "overall")
#heatmap(K.overall)
kinship <- calc_kinship(pr.qc)
heatmap(kinship)

No additive covariates

Significance thresholds

operm <- scan1perm(pr.qc, covars["age.of.onset"], model="normal", n_perm=10, perm_Xsp=TRUE, chr_lengths=chr_lengths(gm$gmap))

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))
names(summary_table) <- c("autosomes","X")
summary_table$significance.level <- rownames(summary_table)

rownames(summary_table) <- NULL

summary_table[c(3,1:2)] %>%
  kable(escape = F,align = c("ccc")) %>%
  kable_styling("striped", full_width = T) %>%
  column_spec(1, bold=TRUE)

significance.level	autosomes	X
0.01	2.126534	2.538558
0.05	2.027876	2.478866
0.1	1.904246	2.400809

Genome-wide scan

plot_lod<-function(out,map){
  for (i in 1:dim(out)[2]){
#par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - ICI vs. EOI (no covariates) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

  }
}


print("with no kinship")

[1] “with no kinship”

outf <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal")

plot_lod(outf,gm$gmap)

print("with normal kinship")

[1] “with normal kinship”

outk <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", kinship=kinship)

plot_lod(outk,gm$gmap)

print("with loco kinship")

[1] “with loco kinship”

out <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", kinship=K)

plot_lod(out,gm$gmap)

print(paste0("number of samples in analysis = ", as.data.frame(attributes(out)$sample_size)[1,]))

[1] “number of samples in analysis = 101”

LOD peaks

Centimorgan (cM)

peaks<-find_peaks(out, gm$gmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)

if(nrow(peaks) > 0){
peaks$marker <- find_marker(gm$gmap, chr=peaks$chr,pos=peaks$pos)
names(peaks)[2] <- c("phenotype")
peaks <- peaks[-1]

rownames(peaks) <- NULL
print(kable(peaks, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

#plot only peak chromosomes

plot_lod_chr<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " - ICI vs. EOI (no covariates) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

  }
}


} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

phenotype	chr	pos	lod	ci_lo	ci_hi	marker
age.of.onset	6	26.68	2.327825	5.377	46.914	UNC11108920

if(nrow(peaks) < 50 & nrow(peaks) > 0){

for(i in unique(peaks$chr)){
#for (i in 1:nrow(peaks)){
  #plot_lod_chr(out,gm$gmap, peaks$chr[i])
  plot_lod_chr(out,gm$gmap, i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

Megabase (MB)

peaks_mba<-find_peaks(out, gm$pmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)
if(nrow(peaks) > 0){
peaks_mba$marker <- find_marker(gm$pmap, chr=peaks_mba$chr,pos=peaks_mba$pos)
names(peaks_mba)[2] <- c("phenotype")
peaks_mba <- peaks_mba[-1]

rownames(peaks_mba) <- NULL
print(kable(peaks_mba, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

  plot_lod_chr_mb<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " - ICI vs. EOI (no covariates) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()
  }
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

phenotype	chr	pos	lod	ci_lo	ci_hi	marker
age.of.onset	6	54.12741	2.327825	12.98686	100.8239	UNC11108920

if(nrow(peaks_mba) < 50 & nrow(peaks_mba) > 0){

for(i in unique(peaks_mba$chr)){
#for (i in 1:nrow(peaks_mba)){
  #plot_lod_chr_mb(out,gm$pmap, peaks_mba$chr[i])
  plot_lod_chr_mb(out,gm$pmap,i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks_mba)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

QTL effects

For each peak LOD location we give a list of gene

if(nrow(peaks) < 50 & nrow(peaks) > 0){
for (i in 1:nrow(peaks)){
#for (i in 1:1){
  #Plot 1
  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, covars[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], covars[peaks$phenotype[i]])
  blup_sub <- scan1blup(pr_sub[,chr], covars[peaks$phenotype[i]])

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.eoi_",peaks$phenotype[i],"-no.covariates_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM] )")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM] )")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM] )")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.eoi_",peaks$phenotype[i],"-no.covariates_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))

  #table
  

}

} else {
  print(paste0("There are too many peaks (",nrow(peaks_mba)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

chr	type	start	stop	strand	ID	Name	Dbxref	gene_id	mgi_type	description
6	pseudogene	13.05540	13.05662	negative	MGI_C57BL6J_3642954	Gm5300	NCBI_Gene:384350,ENSEMBL:ENSMUSG00000098052	MGI:3642954	pseudogene	predicted gene 5300
6	gene	13.06974	13.08927	positive	MGI_C57BL6J_1919150	Tmem106b	NCBI_Gene:71900,ENSEMBL:ENSMUSG00000029571	MGI:1919150	protein coding gene	transmembrane protein 106B
6	gene	13.11130	13.11143	positive	MGI_C57BL6J_5454762	Gm24985	ENSEMBL:ENSMUSG00000077643	MGI:5454762	snoRNA gene	predicted gene, 24985
6	gene	13.15630	13.22496	negative	MGI_C57BL6J_2685313	Vwde	NCBI_Gene:232585,ENSEMBL:ENSMUSG00000079679	MGI:2685313	protein coding gene	von Willebrand factor D and EGF domains
6	gene	13.26370	13.26461	positive	MGI_C57BL6J_2685571	Gm725	NCBI_Gene:277899	MGI:2685571	protein coding gene	predicted gene 725
6	gene	13.41334	13.41600	positive	MGI_C57BL6J_1916663	1700016P04Rik	NCBI_Gene:69413,ENSEMBL:ENSMUSG00000101894	MGI:1916663	lncRNA gene	RIKEN cDNA 1700016P04 gene
6	pseudogene	13.46140	13.46199	negative	MGI_C57BL6J_3780965	Gm2796	NCBI_Gene:100040478,ENSEMBL:ENSMUSG00000107500	MGI:3780965	pseudogene	predicted gene 2796
6	gene	13.54951	13.54961	positive	MGI_C57BL6J_5455514	Gm25737	ENSEMBL:ENSMUSG00000095489	MGI:5455514	snRNA gene	predicted gene, 25737
6	gene	13.58069	13.60822	negative	MGI_C57BL6J_1921794	Tmem168	NCBI_Gene:101118,ENSEMBL:ENSMUSG00000029569	MGI:1921794	protein coding gene	transmembrane protein 168
6	gene	13.62567	13.67797	negative	MGI_C57BL6J_2141466	Bmt2	NCBI_Gene:101148,ENSEMBL:ENSMUSG00000042742	MGI:2141466	protein coding gene	base methyltransferase of 25S rRNA 2
6	gene	13.74948	13.77671	positive	MGI_C57BL6J_5623239	Gm40354	NCBI_Gene:105244809	MGI:5623239	lncRNA gene	predicted gene, 40354
6	gene	13.82416	13.83204	negative	MGI_C57BL6J_5621651	Gm38766	NCBI_Gene:105242598	MGI:5621651	lncRNA gene	predicted gene, 38766
6	gene	13.83445	13.83994	negative	MGI_C57BL6J_1927851	Gpr85	NCBI_Gene:64450,ENSEMBL:ENSMUSG00000048216	MGI:1927851	protein coding gene	G protein-coupled receptor 85
6	gene	13.86773	13.87152	negative	MGI_C57BL6J_1913770	2610001J05Rik	NCBI_Gene:66520,ENSEMBL:ENSMUSG00000052419	MGI:1913770	protein coding gene	RIKEN cDNA 2610001J05 gene
6	gene	13.87153	14.04439	positive	MGI_C57BL6J_1923561	1110019D14Rik	NCBI_Gene:76311,ENSEMBL:ENSMUSG00000097616	MGI:1923561	lncRNA gene	RIKEN cDNA 1110019D14 gene
6	pseudogene	13.91315	13.91345	negative	MGI_C57BL6J_5690804	Gm44412	ENSEMBL:ENSMUSG00000107562	MGI:5690804	pseudogene	predicted gene, 44412
6	pseudogene	14.00601	14.00635	positive	MGI_C57BL6J_5690803	Gm44411	ENSEMBL:ENSMUSG00000107942	MGI:5690803	pseudogene	predicted gene, 44411
6	gene	14.01853	14.04552	positive	MGI_C57BL6J_5621652	Gm38767	NCBI_Gene:105242599	MGI:5621652	lncRNA gene	predicted gene, 38767
6	pseudogene	14.08103	14.08165	negative	MGI_C57BL6J_5011437	Gm19252	NCBI_Gene:100462956,ENSEMBL:ENSMUSG00000108205	MGI:5011437	pseudogene	predicted gene, 19252
6	gene	14.11332	14.11343	positive	MGI_C57BL6J_5453537	Gm23760	ENSEMBL:ENSMUSG00000088975	MGI:5453537	snoRNA gene	predicted gene, 23760
6	pseudogene	14.38948	14.39005	negative	MGI_C57BL6J_3648638	Gm8820	NCBI_Gene:667797,ENSEMBL:ENSMUSG00000107403	MGI:3648638	pseudogene	predicted gene 8820
6	gene	14.45705	14.45715	negative	MGI_C57BL6J_5452790	Gm23013	ENSEMBL:ENSMUSG00000077334	MGI:5452790	snRNA gene	predicted gene, 23013
6	pseudogene	14.57077	14.57103	negative	MGI_C57BL6J_5690838	Gm44446	ENSEMBL:ENSMUSG00000107657	MGI:5690838	pseudogene	predicted gene, 44446
6	gene	14.60845	14.61164	positive	MGI_C57BL6J_5621653	Gm38768	NCBI_Gene:105242600	MGI:5621653	lncRNA gene	predicted gene, 38768
6	gene	14.71382	14.75527	negative	MGI_C57BL6J_2153588	Ppp1r3a	NCBI_Gene:140491,ENSEMBL:ENSMUSG00000042717	MGI:2153588	protein coding gene	protein phosphatase 1, regulatory subunit 3A
6	gene	14.78468	14.81921	negative	MGI_C57BL6J_5595459	Gm36300	NCBI_Gene:102640167	MGI:5595459	lncRNA gene	predicted gene, 36300
6	gene	14.90135	15.44198	positive	MGI_C57BL6J_2148705	Foxp2	NCBI_Gene:114142,ENSEMBL:ENSMUSG00000029563	MGI:2148705	protein coding gene	forkhead box P2
6	pseudogene	14.94852	14.94914	positive	MGI_C57BL6J_3781017	Gm2845	NCBI_Gene:100040568	MGI:3781017	pseudogene	predicted gene 2845
6	gene	15.40498	15.40509	positive	MGI_C57BL6J_5455247	Gm25470	ENSEMBL:ENSMUSG00000093317	MGI:5455247	miRNA gene	predicted gene, 25470
6	gene	15.63612	15.63837	positive	MGI_C57BL6J_5690431	Gm44039	ENSEMBL:ENSMUSG00000107703	MGI:5690431	unclassified gene	predicted gene, 44039
6	gene	15.63813	15.63976	negative	MGI_C57BL6J_5595511	Gm36352	NCBI_Gene:102640235	MGI:5595511	lncRNA gene	predicted gene, 36352
6	gene	15.72066	15.80217	positive	MGI_C57BL6J_104611	Mdfic	NCBI_Gene:16543,ENSEMBL:ENSMUSG00000041390	MGI:104611	protein coding gene	MyoD family inhibitor domain containing
6	gene	15.81132	15.81306	positive	MGI_C57BL6J_5690316	Gm43924	ENSEMBL:ENSMUSG00000108046	MGI:5690316	unclassified gene	predicted gene, 43924
6	gene	15.83609	15.83778	positive	MGI_C57BL6J_5690382	Gm43990	ENSEMBL:ENSMUSG00000108048	MGI:5690382	unclassified gene	predicted gene, 43990
6	pseudogene	16.08969	16.08996	negative	MGI_C57BL6J_5690383	Gm43991	ENSEMBL:ENSMUSG00000108201	MGI:5690383	pseudogene	predicted gene, 43991
6	pseudogene	16.23324	16.23349	negative	MGI_C57BL6J_5690385	Gm43993	ENSEMBL:ENSMUSG00000107885	MGI:5690385	pseudogene	predicted gene, 43993
6	pseudogene	16.23763	16.23824	positive	MGI_C57BL6J_3781327	Gm3148	NCBI_Gene:100041116,ENSEMBL:ENSMUSG00000108089	MGI:3781327	pseudogene	predicted gene 3148
6	gene	16.44401	16.46995	negative	MGI_C57BL6J_5595565	Gm36406	NCBI_Gene:102640305,ENSEMBL:ENSMUSG00000108295	MGI:5595565	lncRNA gene	predicted gene, 36406
6	gene	16.52475	16.67438	positive	MGI_C57BL6J_5595662	Gm36503	NCBI_Gene:102640443,ENSEMBL:ENSMUSG00000108025	MGI:5595662	lncRNA gene	predicted gene, 36503
6	gene	16.77752	16.78882	positive	MGI_C57BL6J_5595828	Gm36669	NCBI_Gene:102640655,ENSEMBL:ENSMUSG00000107022	MGI:5595828	lncRNA gene	predicted gene, 36669
6	gene	16.83093	16.89847	negative	MGI_C57BL6J_1333760	Tfec	NCBI_Gene:21426,ENSEMBL:ENSMUSG00000029553	MGI:1333760	protein coding gene	transcription factor EC
6	pseudogene	16.92523	16.92693	positive	MGI_C57BL6J_3647813	Gm5721	NCBI_Gene:435881,ENSEMBL:ENSMUSG00000081744	MGI:3647813	pseudogene	predicted gene 5721
6	gene	17.04800	17.06515	negative	MGI_C57BL6J_3705105	Gm15473	NCBI_Gene:100504308,ENSEMBL:ENSMUSG00000084772	MGI:3705105	lncRNA gene	predicted gene 15473
6	gene	17.06501	17.17183	negative	MGI_C57BL6J_3647654	Gm4876	NCBI_Gene:232599,ENSEMBL:ENSMUSG00000054556	MGI:3647654	lncRNA gene	predicted gene 4876
6	gene	17.06515	17.10583	positive	MGI_C57BL6J_105081	Tes	NCBI_Gene:21753,ENSEMBL:ENSMUSG00000029552	MGI:105081	protein coding gene	testis derived transcript
6	gene	17.19775	17.21015	positive	MGI_C57BL6J_2442531	D830026I12Rik	NCBI_Gene:319682,ENSEMBL:ENSMUSG00000085171	MGI:2442531	lncRNA gene	RIKEN cDNA D830026I12 gene
6	gene	17.20682	17.38560	negative	MGI_C57BL6J_3783029	Gm15581	ENSEMBL:ENSMUSG00000085264	MGI:3783029	lncRNA gene	predicted gene 15581
6	gene	17.28119	17.28913	positive	MGI_C57BL6J_107571	Cav2	NCBI_Gene:12390,ENSEMBL:ENSMUSG00000000058	MGI:107571	protein coding gene	caveolin 2
6	gene	17.30634	17.34145	positive	MGI_C57BL6J_102709	Cav1	NCBI_Gene:12389,ENSEMBL:ENSMUSG00000007655	MGI:102709	protein coding gene	caveolin 1, caveolae protein
6	gene	17.34773	17.34834	positive	MGI_C57BL6J_5580297	Gm29591	ENSEMBL:ENSMUSG00000100101	MGI:5580297	lncRNA gene	predicted gene 29591
6	gene	17.38191	17.38395	positive	MGI_C57BL6J_5826590	Gm46953	NCBI_Gene:108169132	MGI:5826590	lncRNA gene	predicted gene, 46953
6	gene	17.43631	17.43641	positive	MGI_C57BL6J_5454798	Gm25021	ENSEMBL:ENSMUSG00000093902	MGI:5454798	snRNA gene	predicted gene, 25021
6	gene	17.46335	17.57398	positive	MGI_C57BL6J_96969	Met	NCBI_Gene:17295,ENSEMBL:ENSMUSG00000009376	MGI:96969	protein coding gene	met proto-oncogene
6	gene	17.57807	17.57883	positive	MGI_C57BL6J_1925238	D730047N16Rik	NA	NA	unclassified gene	RIKEN cDNA D730047N16 gene
6	gene	17.63623	17.66697	positive	MGI_C57BL6J_106222	Capza2	NCBI_Gene:12343,ENSEMBL:ENSMUSG00000015733	MGI:106222	protein coding gene	capping protein (actin filament) muscle Z-line, alpha 2
6	gene	17.69293	17.94302	positive	MGI_C57BL6J_1927450	St7	NCBI_Gene:64213,ENSEMBL:ENSMUSG00000029534	MGI:1927450	protein coding gene	suppression of tumorigenicity 7
6	gene	17.69343	17.69356	positive	MGI_C57BL6J_5531137	Gm27755	ENSEMBL:ENSMUSG00000098767	MGI:5531137	unclassified non-coding RNA gene	predicted gene, 27755
6	gene	17.69394	17.69404	positive	MGI_C57BL6J_5531144	Gm27762	ENSEMBL:ENSMUSG00000098567	MGI:5531144	unclassified non-coding RNA gene	predicted gene, 27762
6	gene	17.69490	17.69508	positive	MGI_C57BL6J_5531342	Gm27960	ENSEMBL:ENSMUSG00000098874	MGI:5531342	unclassified non-coding RNA gene	predicted gene, 27960
6	gene	17.69535	17.69553	positive	MGI_C57BL6J_5530747	Gm27365	ENSEMBL:ENSMUSG00000098525	MGI:5530747	unclassified non-coding RNA gene	predicted gene, 27365
6	gene	17.69689	17.69715	positive	MGI_C57BL6J_5530924	Gm27542	ENSEMBL:ENSMUSG00000099244	MGI:5530924	unclassified non-coding RNA gene	predicted gene, 27542
6	gene	17.70323	17.70342	positive	MGI_C57BL6J_5531390	Gm28008	ENSEMBL:ENSMUSG00000098988	MGI:5531390	unclassified non-coding RNA gene	predicted gene, 28008
6	pseudogene	17.71060	17.71122	negative	MGI_C57BL6J_3652332	Gm13898	NCBI_Gene:100417251,ENSEMBL:ENSMUSG00000086409	MGI:3652332	pseudogene	predicted gene 13898
6	pseudogene	17.71169	17.71294	negative	MGI_C57BL6J_3652262	Gm13899	NCBI_Gene:100418218,ENSEMBL:ENSMUSG00000081077	MGI:3652262	pseudogene	predicted gene 13899
6	gene	17.71758	17.72051	positive	MGI_C57BL6J_5663670	Gm43533	ENSEMBL:ENSMUSG00000106822	MGI:5663670	unclassified gene	predicted gene 43533
6	gene	17.74752	17.74890	negative	MGI_C57BL6J_5662989	Gm42852	ENSEMBL:ENSMUSG00000106801	MGI:5662989	unclassified gene	predicted gene 42852
6	gene	17.83459	17.83518	negative	MGI_C57BL6J_5477232	Gm26738	ENSEMBL:ENSMUSG00000097700	MGI:5477232	lncRNA gene	predicted gene, 26738
6	gene	17.90571	17.90584	positive	MGI_C57BL6J_5530826	Gm27444	ENSEMBL:ENSMUSG00000098570	MGI:5530826	unclassified non-coding RNA gene	predicted gene, 27444
6	gene	17.90717	17.90729	positive	MGI_C57BL6J_5530784	Gm27402	ENSEMBL:ENSMUSG00000098791	MGI:5530784	unclassified non-coding RNA gene	predicted gene, 27402
6	gene	17.91500	17.92060	positive	MGI_C57BL6J_5663981	Gm43844	ENSEMBL:ENSMUSG00000106858	MGI:5663981	unclassified gene	predicted gene 43844
6	gene	17.98547	18.03275	negative	MGI_C57BL6J_98954	Wnt2	NCBI_Gene:22413,ENSEMBL:ENSMUSG00000010797	MGI:98954	protein coding gene	wingless-type MMTV integration site family, member 2
6	gene	18.05096	18.10906	negative	MGI_C57BL6J_1921318	Asz1	NCBI_Gene:74068,ENSEMBL:ENSMUSG00000010796	MGI:1921318	protein coding gene	ankyrin repeat, SAM and basic leucine zipper domain containing 1
6	gene	18.11014	18.11196	negative	MGI_C57BL6J_5663982	Gm43845	ENSEMBL:ENSMUSG00000107177	MGI:5663982	unclassified gene	predicted gene 43845
6	pseudogene	18.14472	18.14594	positive	MGI_C57BL6J_3783040	Gm15593	NCBI_Gene:386426,ENSEMBL:ENSMUSG00000084203	MGI:3783040	pseudogene	predicted gene 15593
6	pseudogene	18.15634	18.15712	negative	MGI_C57BL6J_3783043	Gm15596	NCBI_Gene:636450,ENSEMBL:ENSMUSG00000082289	MGI:3783043	pseudogene	predicted gene 15596
6	gene	18.17026	18.32277	positive	MGI_C57BL6J_88388	Cftr	NCBI_Gene:12638,ENSEMBL:ENSMUSG00000041301	MGI:88388	protein coding gene	cystic fibrosis transmembrane conductance regulator
6	gene	18.27014	18.28905	negative	MGI_C57BL6J_3783039	Gm15592	ENSEMBL:ENSMUSG00000087389	MGI:3783039	lncRNA gene	predicted gene 15592
6	pseudogene	18.29426	18.29523	positive	MGI_C57BL6J_3783042	Gm15595	NCBI_Gene:100417564,ENSEMBL:ENSMUSG00000080767	MGI:3783042	pseudogene	predicted gene 15595
6	gene	18.36647	18.51490	negative	MGI_C57BL6J_1353467	Cttnbp2	NCBI_Gene:30785,ENSEMBL:ENSMUSG00000000416	MGI:1353467	protein coding gene	cortactin binding protein 2
6	gene	18.42468	18.42788	positive	MGI_C57BL6J_3783041	Gm15594	ENSEMBL:ENSMUSG00000084947	MGI:3783041	lncRNA gene	predicted gene 15594
6	gene	18.42966	18.43125	negative	MGI_C57BL6J_5663980	Gm43843	ENSEMBL:ENSMUSG00000106944	MGI:5663980	unclassified gene	predicted gene 43843
6	gene	18.43712	18.44824	positive	MGI_C57BL6J_5623241	Gm40356	NCBI_Gene:105244811	MGI:5623241	lncRNA gene	predicted gene, 40356
6	gene	18.44927	18.44934	negative	MGI_C57BL6J_5456010	Gm26233	ENSEMBL:ENSMUSG00000093271	MGI:5456010	miRNA gene	predicted gene, 26233
6	gene	18.72729	18.72740	positive	MGI_C57BL6J_5453425	Gm23648	ENSEMBL:ENSMUSG00000095722	MGI:5453425	snRNA gene	predicted gene, 23648
6	pseudogene	18.79285	18.79311	positive	MGI_C57BL6J_5663365	Gm43228	ENSEMBL:ENSMUSG00000107299	MGI:5663365	pseudogene	predicted gene 43228
6	pseudogene	18.82451	18.82558	positive	MGI_C57BL6J_3648027	Gm5874	NCBI_Gene:545829,ENSEMBL:ENSMUSG00000071568	MGI:3648027	pseudogene	predicted gene 5874
6	gene	18.84422	18.84736	positive	MGI_C57BL6J_5477303	Gm26809	ENSEMBL:ENSMUSG00000097815	MGI:5477303	lncRNA gene	predicted gene, 26809
6	gene	18.84591	18.84821	negative	MGI_C57BL6J_5012371	Gm20186	ENSEMBL:ENSMUSG00000106874	MGI:5012371	lncRNA gene	predicted gene, 20186
6	gene	18.84858	18.85575	positive	MGI_C57BL6J_1923772	Lsm8	NCBI_Gene:76522,ENSEMBL:ENSMUSG00000044155	MGI:1923772	protein coding gene	LSM8 homolog, U6 small nuclear RNA associated
6	gene	18.85415	18.87959	positive	MGI_C57BL6J_1922446	Ankrd7	NCBI_Gene:75196,ENSEMBL:ENSMUSG00000029517	MGI:1922446	protein coding gene	ankyrin repeat domain 7
6	pseudogene	18.88271	18.88420	positive	MGI_C57BL6J_5663635	Gm43498	ENSEMBL:ENSMUSG00000106819	MGI:5663635	pseudogene	predicted gene 43498
6	gene	19.04684	19.04715	positive	MGI_C57BL6J_5452495	Gm22718	ENSEMBL:ENSMUSG00000084650	MGI:5452495	unclassified non-coding RNA gene	predicted gene, 22718
6	pseudogene	19.11944	19.12117	positive	MGI_C57BL6J_3645297	Gm6655	NCBI_Gene:626180,ENSEMBL:ENSMUSG00000107349	MGI:3645297	pseudogene	predicted gene 6655
6	gene	19.24790	19.27884	negative	MGI_C57BL6J_1921975	4930524B17Rik	NCBI_Gene:74725,ENSEMBL:ENSMUSG00000107217	MGI:1921975	lncRNA gene	RIKEN cDNA 4930524B17 gene
6	pseudogene	19.31722	19.31940	negative	MGI_C57BL6J_103210	Eif3s6-ps4	NCBI_Gene:16345,ENSEMBL:ENSMUSG00000106885	MGI:103210	pseudogene	eukaryotic translation initiation factor 3, subunit 6, pseudogene 4
6	gene	19.34133	19.34159	negative	MGI_C57BL6J_5453990	Gm24213	ENSEMBL:ENSMUSG00000088880	MGI:5453990	unclassified non-coding RNA gene	predicted gene, 24213
6	gene	19.55534	19.55546	positive	MGI_C57BL6J_5530862	Mir6370	miRBase:MI0021899,NCBI_Gene:102465192,ENSEMBL:ENSMUSG00000099149	MGI:5530862	miRNA gene	microRNA 6370
6	gene	19.62461	19.62471	positive	MGI_C57BL6J_5452605	Gm22828	ENSEMBL:ENSMUSG00000065702	MGI:5452605	snRNA gene	predicted gene, 22828
6	pseudogene	19.77396	19.77755	negative	MGI_C57BL6J_5010667	Gm18482	NCBI_Gene:100417252,ENSEMBL:ENSMUSG00000107100	MGI:5010667	pseudogene	predicted gene, 18482
6	pseudogene	19.78469	19.78479	positive	MGI_C57BL6J_5663638	Gm43501	ENSEMBL:ENSMUSG00000106814	MGI:5663638	pseudogene	predicted gene 43501
6	pseudogene	19.78805	19.78902	positive	MGI_C57BL6J_5662718	Gm42581	ENSEMBL:ENSMUSG00000107067	MGI:5662718	pseudogene	predicted gene 42581
6	pseudogene	20.49054	20.49581	positive	MGI_C57BL6J_5588957	Gm29798	NCBI_Gene:101056208	MGI:5588957	pseudogene	predicted gene, 29798
6	gene	20.95015	20.97038	negative	MGI_C57BL6J_5621657	Gm38772	NCBI_Gene:105242604	MGI:5621657	lncRNA gene	predicted gene, 38772
6	pseudogene	20.97031	20.97122	negative	MGI_C57BL6J_5011287	Gm19102	NCBI_Gene:100418256,ENSEMBL:ENSMUSG00000106763	MGI:5011287	pseudogene	predicted gene, 19102
6	gene	21.01311	21.01324	negative	MGI_C57BL6J_5453737	Gm23960	ENSEMBL:ENSMUSG00000087831	MGI:5453737	snoRNA gene	predicted gene, 23960
6	gene	21.12816	21.12826	positive	MGI_C57BL6J_5456150	Gm26373	ENSEMBL:ENSMUSG00000088458	MGI:5456150	snRNA gene	predicted gene, 26373
6	gene	21.21550	21.72980	positive	MGI_C57BL6J_102663	Kcnd2	NCBI_Gene:16508,ENSEMBL:ENSMUSG00000060882	MGI:102663	protein coding gene	potassium voltage-gated channel, Shal-related family, member 2
6	gene	21.23559	21.23617	negative	MGI_C57BL6J_2141497	6430519N07Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 6430519N07 gene
6	gene	21.25892	21.26562	positive	MGI_C57BL6J_5662720	Gm42583	ENSEMBL:ENSMUSG00000106826	MGI:5662720	unclassified gene	predicted gene 42583
6	gene	21.27497	21.27657	positive	MGI_C57BL6J_1923983	6330436F06Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 6330436F06 gene
6	gene	21.28210	21.28356	positive	MGI_C57BL6J_1923408	6330510M09Rik	NA	NA	unclassified gene	RIKEN cDNA 6330510M09 gene
6	gene	21.35212	21.35460	positive	MGI_C57BL6J_2443190	6720467L15Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 6720467L15 gene
6	pseudogene	21.49166	21.49188	positive	MGI_C57BL6J_5662721	Gm42584	ENSEMBL:ENSMUSG00000107097	MGI:5662721	pseudogene	predicted gene 42584
6	gene	21.68130	21.68538	positive	MGI_C57BL6J_2444650	5330437M03Rik	ENSEMBL:ENSMUSG00000106855	MGI:2444650	unclassified gene	RIKEN cDNA 5330437M03 gene
6	gene	21.77139	21.87955	negative	MGI_C57BL6J_1889818	Tspan12	NCBI_Gene:269831,ENSEMBL:ENSMUSG00000029669	MGI:1889818	protein coding gene	tetraspanin 12
6	gene	21.85242	21.85378	positive	MGI_C57BL6J_5589429	Gm30270	NCBI_Gene:102632112,ENSEMBL:ENSMUSG00000106709	MGI:5589429	lncRNA gene	predicted gene, 30270
6	gene	21.85298	21.85818	negative	MGI_C57BL6J_3781467	Gm3289	ENSEMBL:ENSMUSG00000106871	MGI:3781467	lncRNA gene	predicted gene 3289
6	gene	21.94957	21.97604	positive	MGI_C57BL6J_1919027	Ing3	NCBI_Gene:71777,ENSEMBL:ENSMUSG00000029670	MGI:1919027	protein coding gene	inhibitor of growth family, member 3
6	gene	21.98570	22.25641	positive	MGI_C57BL6J_2444814	Cped1	NCBI_Gene:214642,ENSEMBL:ENSMUSG00000062980	MGI:2444814	protein coding gene	cadherin-like and PC-esterase domain containing 1
6	gene	21.98591	22.06769	negative	MGI_C57BL6J_5477213	Gm26719	ENSEMBL:ENSMUSG00000097364	MGI:5477213	lncRNA gene	predicted gene, 26719
6	pseudogene	22.18253	22.18517	positive	MGI_C57BL6J_3644121	Gm8564	NCBI_Gene:105244812	MGI:3644121	pseudogene	predicted gene 8564
6	pseudogene	22.24544	22.24595	negative	MGI_C57BL6J_5662710	Gm42573	NCBI_Gene:108169133,ENSEMBL:ENSMUSG00000106736	MGI:5662710	pseudogene	predicted gene 42573
6	gene	22.28817	22.29852	positive	MGI_C57BL6J_2136018	Wnt16	NCBI_Gene:93735,ENSEMBL:ENSMUSG00000029671	MGI:2136018	protein coding gene	wingless-type MMTV integration site family, member 16
6	gene	22.30652	22.35624	negative	MGI_C57BL6J_107892	Fam3c	NCBI_Gene:27999,ENSEMBL:ENSMUSG00000029672	MGI:107892	protein coding gene	family with sequence similarity 3, member C
6	gene	22.38961	22.39208	negative	MGI_C57BL6J_5621658	Gm38773	NCBI_Gene:105242605	MGI:5621658	lncRNA gene	predicted gene, 38773
6	gene	22.54315	22.63414	negative	MGI_C57BL6J_5621659	Gm38774	NCBI_Gene:105242606	MGI:5621659	lncRNA gene	predicted gene, 38774
6	pseudogene	22.62292	22.62369	positive	MGI_C57BL6J_5663767	Gm43630	ENSEMBL:ENSMUSG00000107282	MGI:5663767	pseudogene	predicted gene 43630
6	pseudogene	22.70343	22.70463	positive	MGI_C57BL6J_3643156	Gm8927	NCBI_Gene:668018,ENSEMBL:ENSMUSG00000098187	MGI:3643156	pseudogene	predicted gene 8927
6	pseudogene	22.73373	22.73459	positive	MGI_C57BL6J_3646325	Gm8930	NCBI_Gene:668022,ENSEMBL:ENSMUSG00000106803	MGI:3646325	pseudogene	predicted gene 8930
6	pseudogene	22.75940	22.76140	positive	MGI_C57BL6J_5011046	Gm18861	NCBI_Gene:100417850,ENSEMBL:ENSMUSG00000107303	MGI:5011046	pseudogene	predicted gene, 18861
6	gene	22.76811	22.76820	negative	MGI_C57BL6J_5453738	Gm23961	ENSEMBL:ENSMUSG00000096079	MGI:5453738	miRNA gene	predicted gene, 23961
6	gene	22.78982	22.78993	positive	MGI_C57BL6J_5455719	Gm25942	ENSEMBL:ENSMUSG00000096721	MGI:5455719	miRNA gene	predicted gene, 25942
6	pseudogene	22.80463	22.80533	negative	MGI_C57BL6J_5663766	Gm43629	ENSEMBL:ENSMUSG00000107059	MGI:5663766	pseudogene	predicted gene 43629
6	gene	22.87546	23.05292	positive	MGI_C57BL6J_97816	Ptprz1	NCBI_Gene:19283,ENSEMBL:ENSMUSG00000068748	MGI:97816	protein coding gene	protein tyrosine phosphatase, receptor type Z, polypeptide 1
6	gene	22.97909	22.98610	negative	MGI_C57BL6J_5589652	Gm30493	NCBI_Gene:102632417	MGI:5589652	lncRNA gene	predicted gene, 30493
6	gene	22.98820	22.99163	positive	MGI_C57BL6J_5826591	Gm46954	NCBI_Gene:108169134	MGI:5826591	lncRNA gene	predicted gene, 46954
6	gene	23.07217	23.13299	negative	MGI_C57BL6J_1353573	Aass	NCBI_Gene:30956,ENSEMBL:ENSMUSG00000029695	MGI:1353573	protein coding gene	aminoadipate-semialdehyde synthase
6	pseudogene	23.15593	23.15662	negative	MGI_C57BL6J_3645708	Gm8945	NCBI_Gene:668044,ENSEMBL:ENSMUSG00000117306	MGI:3645708	pseudogene	predicted gene 8945
6	pseudogene	23.15799	23.16006	negative	MGI_C57BL6J_3643846	Gm5989	NCBI_Gene:546894,ENSEMBL:ENSMUSG00000106989	MGI:3643846	pseudogene	predicted pseudogene 5989
6	pseudogene	23.16337	23.16409	negative	MGI_C57BL6J_3648955	Gm8950	NCBI_Gene:668053,ENSEMBL:ENSMUSG00000117101	MGI:3648955	pseudogene	predicted gene 8950
6	pseudogene	23.16534	23.16741	negative	MGI_C57BL6J_3642953	Gm5301	NCBI_Gene:384356,ENSEMBL:ENSMUSG00000107032	MGI:3642953	pseudogene	predicted pseudogene 5301
6	gene	23.18048	23.18153	negative	MGI_C57BL6J_1922499	4930554P06Rik	NCBI_Gene:102632493	MGI:1922499	lncRNA gene	RIKEN cDNA 4930554P06 gene
6	pseudogene	23.23483	23.23648	positive	MGI_C57BL6J_5010118	Gm17933	NCBI_Gene:100416135	MGI:5010118	pseudogene	predicted gene, 17933
6	gene	23.24504	23.25246	negative	MGI_C57BL6J_1920441	Fezf1	NCBI_Gene:73191,ENSEMBL:ENSMUSG00000029697	MGI:1920441	protein coding gene	Fez family zinc finger 1
6	gene	23.25113	23.25336	positive	MGI_C57BL6J_2443208	C130093G08Rik	ENSEMBL:ENSMUSG00000106775	MGI:2443208	lncRNA gene	RIKEN cDNA C130093G08 gene
6	gene	23.26277	23.83942	negative	MGI_C57BL6J_2443963	Cadps2	NCBI_Gene:320405,ENSEMBL:ENSMUSG00000017978	MGI:2443963	protein coding gene	Ca2+-dependent activator protein for secretion 2
6	gene	23.51975	23.51986	positive	MGI_C57BL6J_5531341	Gm27959	ENSEMBL:ENSMUSG00000098877	MGI:5531341	rRNA gene	predicted gene, 27959
6	gene	23.57343	23.58335	positive	MGI_C57BL6J_5621660	Gm38775	NCBI_Gene:105242607	MGI:5621660	lncRNA gene	predicted gene, 38775
6	gene	23.63982	23.63996	negative	MGI_C57BL6J_5453994	Gm24217	ENSEMBL:ENSMUSG00000088885	MGI:5453994	rRNA gene	predicted gene, 24217
6	gene	23.64887	23.65030	negative	MGI_C57BL6J_2677436	Rnf133	NCBI_Gene:386611,ENSEMBL:ENSMUSG00000051956	MGI:2677436	protein coding gene	ring finger protein 133
6	gene	23.65389	23.65514	negative	MGI_C57BL6J_1918550	Rnf148	NCBI_Gene:71300,ENSEMBL:ENSMUSG00000078179	MGI:1918550	protein coding gene	ring finger protein 148
6	pseudogene	23.73650	23.73813	positive	MGI_C57BL6J_5011151	Gm18966	NCBI_Gene:100418047	MGI:5011151	pseudogene	predicted gene, 18966
6	gene	23.96916	23.97006	negative	MGI_C57BL6J_2681247	Tas2r118	NCBI_Gene:387347,ENSEMBL:ENSMUSG00000043865	MGI:2681247	protein coding gene	taste receptor, type 2, member 118
6	gene	24.08828	24.16812	negative	MGI_C57BL6J_1859937	Slc13a1	NCBI_Gene:55961,ENSEMBL:ENSMUSG00000029700	MGI:1859937	protein coding gene	solute carrier family 13 (sodium/sulfate symporters), member 1
6	pseudogene	24.13832	24.14172	negative	MGI_C57BL6J_5313153	Gm20706	NCBI_Gene:102634112,ENSEMBL:ENSMUSG00000093580	MGI:5313153	pseudogene	predicted gene 20706
6	gene	24.14337	24.14347	positive	MGI_C57BL6J_5456163	Gm26386	ENSEMBL:ENSMUSG00000096522	MGI:5456163	miRNA gene	predicted gene, 26386
6	pseudogene	24.34325	24.34459	positive	MGI_C57BL6J_3781313	Gm3136	NCBI_Gene:100041094	MGI:3781313	pseudogene	predicted gene 3136
6	gene	24.44487	24.51856	negative	MGI_C57BL6J_3041159	Iqub	NCBI_Gene:214704,ENSEMBL:ENSMUSG00000046192	MGI:3041159	protein coding gene	IQ motif and ubiquitin domain containing
6	gene	24.51866	24.52801	negative	MGI_C57BL6J_1915452	Ndufa5	NCBI_Gene:68202,ENSEMBL:ENSMUSG00000023089	MGI:1915452	protein coding gene	NADH:ubiquinone oxidoreductase subunit A5
6	gene	24.52814	24.57316	positive	MGI_C57BL6J_1926160	Asb15	NCBI_Gene:78910,ENSEMBL:ENSMUSG00000029685	MGI:1926160	protein coding gene	ankyrin repeat and SOCS box-containing 15
6	pseudogene	24.59453	24.59524	positive	MGI_C57BL6J_5662826	Gm42689	ENSEMBL:ENSMUSG00000107189	MGI:5662826	pseudogene	predicted gene 42689
6	gene	24.59776	24.60541	positive	MGI_C57BL6J_2135672	Lmod2	NCBI_Gene:93677,ENSEMBL:ENSMUSG00000029683	MGI:2135672	protein coding gene	leiomodin 2 (cardiac)
6	gene	24.61380	24.66501	negative	MGI_C57BL6J_1920428	Wasl	NCBI_Gene:73178,ENSEMBL:ENSMUSG00000029684	MGI:1920428	protein coding gene	Wiskott-Aldrich syndrome-like (human)
6	gene	24.65752	24.66037	negative	MGI_C57BL6J_5662993	Gm42856	ENSEMBL:ENSMUSG00000106946	MGI:5662993	unclassified gene	predicted gene 42856
6	gene	24.73325	24.74545	positive	MGI_C57BL6J_1921659	Hyal6	NCBI_Gene:74409,ENSEMBL:ENSMUSG00000029679	MGI:1921659	protein coding gene	hyaluronoglucosaminidase 6
6	gene	24.74833	24.76766	positive	MGI_C57BL6J_1924292	Hyal4	NCBI_Gene:77042,ENSEMBL:ENSMUSG00000029680	MGI:1924292	protein coding gene	hyaluronoglucosaminidase 4
6	gene	24.76628	24.77525	negative	MGI_C57BL6J_5621661	Gm38776	NCBI_Gene:105242608	MGI:5621661	lncRNA gene	predicted gene, 38776
6	gene	24.79119	24.80105	positive	MGI_C57BL6J_109335	Spam1	NCBI_Gene:20690,ENSEMBL:ENSMUSG00000029682	MGI:109335	protein coding gene	sperm adhesion molecule 1
6	pseudogene	24.83729	24.83842	positive	MGI_C57BL6J_5010512	Gm18327	NCBI_Gene:100416932,ENSEMBL:ENSMUSG00000107223	MGI:5010512	pseudogene	predicted gene, 18327
6	gene	24.85796	24.89196	positive	MGI_C57BL6J_1921718	Hyal5	NCBI_Gene:74468,ENSEMBL:ENSMUSG00000029678	MGI:1921718	protein coding gene	hyaluronoglucosaminidase 5
6	gene	24.89467	24.89480	negative	MGI_C57BL6J_5452044	Gm22267	ENSEMBL:ENSMUSG00000077196	MGI:5452044	snoRNA gene	predicted gene, 22267
6	gene	24.95114	24.95630	negative	MGI_C57BL6J_2442812	Tmem229a	NCBI_Gene:319832,ENSEMBL:ENSMUSG00000048022	MGI:2442812	protein coding gene	transmembrane protein 229A
6	gene	25.03314	25.05747	positive	MGI_C57BL6J_5621662	Gm38777	NCBI_Gene:105242609	MGI:5621662	lncRNA gene	predicted gene, 38777
6	pseudogene	25.04646	25.04732	negative	MGI_C57BL6J_3642956	Gm5302	NCBI_Gene:384358,ENSEMBL:ENSMUSG00000107212	MGI:3642956	pseudogene	predicted gene 5302
6	gene	25.07877	25.07890	negative	MGI_C57BL6J_5454220	Gm24443	ENSEMBL:ENSMUSG00000087867	MGI:5454220	snoRNA gene	predicted gene, 24443
6	gene	25.12699	25.18399	negative	MGI_C57BL6J_5589817	Gm30658	NCBI_Gene:102632632	MGI:5589817	lncRNA gene	predicted gene, 30658
6	gene	25.19993	25.20005	negative	MGI_C57BL6J_5452306	Gm22529	ENSEMBL:ENSMUSG00000089442	MGI:5452306	snoRNA gene	predicted gene, 22529
6	gene	25.66588	25.69073	negative	MGI_C57BL6J_1313297	Gpr37	NCBI_Gene:14763,ENSEMBL:ENSMUSG00000039904	MGI:1313297	protein coding gene	G protein-coupled receptor 37
6	gene	25.73780	25.74055	negative	MGI_C57BL6J_1925221	A930037O16Rik	NA	NA	unclassified gene	RIKEN cDNA A930037O16 gene
6	gene	25.74374	25.80928	negative	MGI_C57BL6J_2141503	Pot1a	NCBI_Gene:101185,ENSEMBL:ENSMUSG00000029676	MGI:2141503	protein coding gene	protection of telomeres 1A
6	gene	25.93143	25.97723	positive	MGI_C57BL6J_5434112	Gm20756	NCBI_Gene:626904,ENSEMBL:ENSMUSG00000106799	MGI:5434112	lncRNA gene	predicted gene, 20756
6	pseudogene	25.97661	25.97715	negative	MGI_C57BL6J_3647632	Gm6719	NCBI_Gene:626912,ENSEMBL:ENSMUSG00000107127	MGI:3647632	pseudogene	predicted gene 6719
6	gene	26.46029	26.46043	negative	MGI_C57BL6J_5454468	Gm24691	ENSEMBL:ENSMUSG00000088387	MGI:5454468	snRNA gene	predicted gene, 24691
6	gene	26.73978	26.76687	negative	MGI_C57BL6J_5589938	Gm30779	NCBI_Gene:102632801	MGI:5589938	lncRNA gene	predicted gene, 30779
6	pseudogene	26.83042	26.83116	positive	MGI_C57BL6J_5662611	Gm42474	ENSEMBL:ENSMUSG00000106742	MGI:5662611	pseudogene	predicted gene 42474
6	gene	27.20502	27.21848	positive	MGI_C57BL6J_5621663	Gm38778	NCBI_Gene:105242610	MGI:5621663	lncRNA gene	predicted gene, 38778
6	gene	27.27512	28.13591	negative	MGI_C57BL6J_1351345	Grm8	NCBI_Gene:14823,ENSEMBL:ENSMUSG00000024211	MGI:1351345	protein coding gene	glutamate receptor, metabotropic 8
6	gene	27.44109	27.44395	negative	MGI_C57BL6J_5662938	Gm42801	ENSEMBL:ENSMUSG00000107377	MGI:5662938	unclassified gene	predicted gene 42801
6	gene	27.66809	27.66820	positive	MGI_C57BL6J_5456087	Gm26310	ENSEMBL:ENSMUSG00000088391	MGI:5456087	snoRNA gene	predicted gene, 26310
6	gene	27.90555	27.90723	negative	MGI_C57BL6J_1923475	6430711C07Rik	NA	NA	unclassified gene	RIKEN cDNA 6430711C07 gene
6	gene	27.93665	27.93675	negative	MGI_C57BL6J_3629661	Mir592	miRBase:MI0004127,NCBI_Gene:735266,ENSEMBL:ENSMUSG00000076067	MGI:3629661	miRNA gene	microRNA 592
6	gene	28.21055	28.39805	negative	MGI_C57BL6J_1889334	Zfp800	NCBI_Gene:627049,ENSEMBL:ENSMUSG00000039841	MGI:1889334	protein coding gene	zinc finger protein 800
6	gene	28.21101	28.21480	negative	MGI_C57BL6J_5662684	Gm42547	ENSEMBL:ENSMUSG00000106990	MGI:5662684	unclassified gene	predicted gene 42547
6	gene	28.21555	28.26086	positive	MGI_C57BL6J_1923474	6530409C15Rik	ENSEMBL:ENSMUSG00000043340	MGI:1923474	lncRNA gene	RIKEN cDNA 6530409C15 gene
6	gene	28.21917	28.22617	negative	MGI_C57BL6J_5662686	Gm42549	ENSEMBL:ENSMUSG00000107320	MGI:5662686	unclassified gene	predicted gene 42549
6	gene	28.23308	28.23701	negative	MGI_C57BL6J_5662685	Gm42548	ENSEMBL:ENSMUSG00000106959	MGI:5662685	unclassified gene	predicted gene 42548
6	pseudogene	28.36171	28.36317	negative	MGI_C57BL6J_3647388	Gm5303	NCBI_Gene:384360,ENSEMBL:ENSMUSG00000083107	MGI:3647388	pseudogene	predicted gene 5303
6	gene	28.41609	28.42839	negative	MGI_C57BL6J_1921625	Gcc1	NCBI_Gene:74375,ENSEMBL:ENSMUSG00000029708	MGI:1921625	protein coding gene	golgi coiled coil 1
6	gene	28.42356	28.42660	positive	MGI_C57BL6J_99434	Arf5	NCBI_Gene:11844,ENSEMBL:ENSMUSG00000020440	MGI:99434	protein coding gene	ADP-ribosylation factor 5
6	gene	28.42779	28.43940	positive	MGI_C57BL6J_1890386	Fscn3	NCBI_Gene:56223,ENSEMBL:ENSMUSG00000029707	MGI:1890386	protein coding gene	fascin actin-bundling protein 3
6	gene	28.44233	28.44935	negative	MGI_C57BL6J_97488	Pax4	NCBI_Gene:18506,ENSEMBL:ENSMUSG00000029706	MGI:97488	protein coding gene	paired box 4
6	pseudogene	28.46557	28.46698	negative	MGI_C57BL6J_5663401	Gm43264	ENSEMBL:ENSMUSG00000107130	MGI:5663401	pseudogene	predicted gene 43264
6	gene	28.47514	28.93516	positive	MGI_C57BL6J_1929266	Snd1	NCBI_Gene:56463,ENSEMBL:ENSMUSG00000001424	MGI:1929266	protein coding gene	staphylococcal nuclease and tudor domain containing 1
6	gene	28.56349	28.56536	positive	MGI_C57BL6J_5610549	Gm37321	ENSEMBL:ENSMUSG00000104325	MGI:5610549	unclassified gene	predicted gene, 37321
6	gene	28.56807	28.57099	positive	MGI_C57BL6J_5611206	Gm37978	ENSEMBL:ENSMUSG00000103132	MGI:5611206	unclassified gene	predicted gene, 37978
6	gene	28.66183	28.83175	negative	MGI_C57BL6J_2182081	Lrrc4	NCBI_Gene:192198,ENSEMBL:ENSMUSG00000049939	MGI:2182081	protein coding gene	leucine rich repeat containing 4
6	gene	28.79646	28.79971	positive	MGI_C57BL6J_5611168	Gm37940	ENSEMBL:ENSMUSG00000103899	MGI:5611168	unclassified gene	predicted gene, 37940
6	gene	28.95739	28.96604	negative	MGI_C57BL6J_5621664	Gm38779	NCBI_Gene:105242611	MGI:5621664	lncRNA gene	predicted gene, 38779
6	gene	28.96480	28.96641	positive	MGI_C57BL6J_5623242	Gm40357	NCBI_Gene:105244813	MGI:5623242	lncRNA gene	predicted gene, 40357
6	gene	28.98163	29.02892	positive	MGI_C57BL6J_3781472	Gm3294	ENSEMBL:ENSMUSG00000092090	MGI:3781472	lncRNA gene	predicted gene 3294
6	gene	29.02262	29.02269	positive	MGI_C57BL6J_2676815	Mir129-1	miRBase:MI0000222,NCBI_Gene:387237,ENSEMBL:ENSMUSG00000065469	MGI:2676815	miRNA gene	microRNA 129-1
6	gene	29.03095	29.03953	positive	MGI_C57BL6J_5589997	Lnclep	NCBI_Gene:102632876	MGI:5589997	lncRNA gene	long noncoding RNA upstream of leptin
6	gene	29.06020	29.07388	positive	MGI_C57BL6J_104663	Lep	NCBI_Gene:16846,ENSEMBL:ENSMUSG00000059201	MGI:104663	protein coding gene	leptin
6	gene	29.11344	29.11361	negative	MGI_C57BL6J_5455366	Gm25589	ENSEMBL:ENSMUSG00000064436	MGI:5455366	snRNA gene	predicted gene, 25589
6	gene	29.12357	29.16501	negative	MGI_C57BL6J_2655711	Rbm28	NCBI_Gene:68272,ENSEMBL:ENSMUSG00000029701	MGI:2655711	protein coding gene	RNA binding motif protein 28
6	gene	29.15055	29.15068	negative	MGI_C57BL6J_5454080	Gm24303	ENSEMBL:ENSMUSG00000095596	MGI:5454080	miRNA gene	predicted gene, 24303
6	gene	29.16923	29.17958	negative	MGI_C57BL6J_2141677	Prrt4	NCBI_Gene:101359,ENSEMBL:ENSMUSG00000079654	MGI:2141677	protein coding gene	proline-rich transmembrane protein 4
6	gene	29.20043	29.21636	negative	MGI_C57BL6J_96567	Impdh1	NCBI_Gene:23917,ENSEMBL:ENSMUSG00000003500	MGI:96567	protein coding gene	inosine monophosphate dehydrogenase 1
6	gene	29.23443	29.23456	positive	MGI_C57BL6J_5455798	Gm26021	ENSEMBL:ENSMUSG00000089289	MGI:5455798	snoRNA gene	predicted gene, 26021
6	gene	29.25029	29.26496	negative	MGI_C57BL6J_5623243	Gm40358	NCBI_Gene:105244814	MGI:5623243	lncRNA gene	predicted gene, 40358
6	gene	29.27249	29.27545	positive	MGI_C57BL6J_1916823	Hilpda	NCBI_Gene:69573,ENSEMBL:ENSMUSG00000043421	MGI:1916823	protein coding gene	hypoxia inducible lipid droplet associated
6	gene	29.27580	29.29068	positive	MGI_C57BL6J_2141439	Fam71f2	NCBI_Gene:245884,ENSEMBL:ENSMUSG00000079652	MGI:2141439	protein coding gene	family with sequence similarity 71, member F2
6	gene	29.31077	29.31222	negative	MGI_C57BL6J_1921908	4930445G23Rik	NA	NA	unclassified gene	RIKEN cDNA 4930445G23 gene
6	gene	29.31348	29.33602	positive	MGI_C57BL6J_3032524	Fam71f1	NCBI_Gene:330277,ENSEMBL:ENSMUSG00000039742	MGI:3032524	protein coding gene	family with sequence similarity 71, member F1
6	gene	29.32280	29.32321	negative	MGI_C57BL6J_4937999	Gm17172	ENSEMBL:ENSMUSG00000090692	MGI:4937999	lncRNA gene	predicted gene 17172
6	gene	29.34807	29.37711	positive	MGI_C57BL6J_1097158	Calu	NCBI_Gene:12321,ENSEMBL:ENSMUSG00000029767	MGI:1097158	protein coding gene	calumenin
6	gene	29.37667	29.38847	negative	MGI_C57BL6J_99438	Opn1sw	NCBI_Gene:12057,ENSEMBL:ENSMUSG00000058831	MGI:99438	protein coding gene	opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
6	gene	29.38882	29.38890	positive	MGI_C57BL6J_4414008	n-TPagg6	NCBI_Gene:102467586	MGI:4414008	tRNA gene	nuclear encoded tRNA proline 6 (anticodon AGG)
6	gene	29.39631	29.42700	positive	MGI_C57BL6J_1918128	Ccdc136	NCBI_Gene:232664,ENSEMBL:ENSMUSG00000029769	MGI:1918128	protein coding gene	coiled-coil domain containing 136
6	gene	29.39662	29.39671	positive	MGI_C57BL6J_5455997	Gm26220	ENSEMBL:ENSMUSG00000092956	MGI:5455997	miRNA gene	predicted gene, 26220
6	gene	29.39743	29.39758	negative	MGI_C57BL6J_5690746	Gm44354	ENSEMBL:ENSMUSG00000104796	MGI:5690746	miRNA gene	predicted gene, 44354
6	gene	29.43315	29.46189	positive	MGI_C57BL6J_95557	Flnc	NCBI_Gene:68794,ENSEMBL:ENSMUSG00000068699	MGI:95557	protein coding gene	filamin C, gamma
6	gene	29.46772	29.47051	positive	MGI_C57BL6J_1913394	Atp6v1f	NCBI_Gene:66144,ENSEMBL:ENSMUSG00000004285	MGI:1913394	protein coding gene	ATPase, H+ transporting, lysosomal V1 subunit F
6	gene	29.47144	29.47347	positive	MGI_C57BL6J_3644212	Atp6v1fnb	NCBI_Gene:668210,ENSEMBL:ENSMUSG00000090685	MGI:3644212	protein coding gene	Atp6v1f neighbor
6	gene	29.47316	29.50801	negative	MGI_C57BL6J_2141640	Kcp	NCBI_Gene:333088,ENSEMBL:ENSMUSG00000059022	MGI:2141640	protein coding gene	kielin/chordin-like protein
6	gene	29.48772	29.48782	negative	MGI_C57BL6J_5456261	Gm26484	ENSEMBL:ENSMUSG00000088643	MGI:5456261	snRNA gene	predicted gene, 26484
6	gene	29.50724	29.52470	positive	MGI_C57BL6J_5477121	Gm26627	NCBI_Gene:105242612,ENSEMBL:ENSMUSG00000097137	MGI:5477121	lncRNA gene	predicted gene, 26627
6	gene	29.52613	29.54187	positive	MGI_C57BL6J_1350924	Irf5	NCBI_Gene:27056,ENSEMBL:ENSMUSG00000029771	MGI:1350924	protein coding gene	interferon regulatory factor 5
6	gene	29.54083	29.61011	negative	MGI_C57BL6J_1196412	Tnpo3	NCBI_Gene:320938,ENSEMBL:ENSMUSG00000012535	MGI:1196412	protein coding gene	transportin 3
6	gene	29.54660	29.54814	negative	MGI_C57BL6J_5663166	Gm43029	ENSEMBL:ENSMUSG00000106904	MGI:5663166	unclassified gene	predicted gene 43029
6	gene	29.67596	29.67753	positive	MGI_C57BL6J_5590055	Gm30896	NCBI_Gene:102632951	MGI:5590055	lncRNA gene	predicted gene, 30896
6	gene	29.68690	29.68872	negative	MGI_C57BL6J_5621665	Gm38780	NCBI_Gene:105242613	MGI:5621665	lncRNA gene	predicted gene, 38780
6	gene	29.69421	29.71856	positive	MGI_C57BL6J_1919012	Tspan33	NCBI_Gene:232670,ENSEMBL:ENSMUSG00000001763	MGI:1919012	protein coding gene	tetraspanin 33
6	gene	29.73550	29.76137	positive	MGI_C57BL6J_108075	Smo	NCBI_Gene:319757,ENSEMBL:ENSMUSG00000001761	MGI:108075	protein coding gene	smoothened, frizzled class receptor
6	pseudogene	29.75017	29.75151	positive	MGI_C57BL6J_3650430	Gm13717	NCBI_Gene:102633026,ENSEMBL:ENSMUSG00000081564	MGI:3650430	pseudogene	predicted gene 13717
6	gene	29.76801	29.91231	positive	MGI_C57BL6J_1921590	Ahcyl2	NCBI_Gene:74340,ENSEMBL:ENSMUSG00000029772	MGI:1921590	protein coding gene	S-adenosylhomocysteine hydrolase-like 2
6	gene	29.91202	29.91563	negative	MGI_C57BL6J_1922474	4930528J11Rik	ENSEMBL:ENSMUSG00000107012	MGI:1922474	unclassified gene	RIKEN cDNA 4930528J11 gene
6	gene	29.91698	29.95968	positive	MGI_C57BL6J_2444363	Strip2	NCBI_Gene:320609,ENSEMBL:ENSMUSG00000039629	MGI:2444363	protein coding gene	striatin interacting protein 2
6	pseudogene	29.96095	29.96215	positive	MGI_C57BL6J_3651278	Gm13724	NCBI_Gene:100416933,ENSEMBL:ENSMUSG00000082036	MGI:3651278	pseudogene	predicted gene 13724
6	gene	29.96355	29.96366	positive	MGI_C57BL6J_5454313	Gm24536	ENSEMBL:ENSMUSG00000065078	MGI:5454313	snRNA gene	predicted gene, 24536
6	pseudogene	29.96364	29.96385	positive	MGI_C57BL6J_3702114	Gm13725	ENSEMBL:ENSMUSG00000083961	MGI:3702114	pseudogene	predicted gene 13725
6	gene	29.96525	29.96856	positive	MGI_C57BL6J_5590262	Gm31103	NCBI_Gene:102633221	MGI:5590262	lncRNA gene	predicted gene, 31103
6	pseudogene	29.98523	29.99378	positive	MGI_C57BL6J_1923669	Smkr-ps	NCBI_Gene:76419,ENSEMBL:ENSMUSG00000045709	MGI:1923669	pseudogene	smal lysine rich protein 1, pseudogene
6	gene	29.98839	29.98849	positive	MGI_C57BL6J_5452826	Gm23049	ENSEMBL:ENSMUSG00000095989	MGI:5452826	miRNA gene	predicted gene, 23049
6	gene	30.04740	30.04914	negative	MGI_C57BL6J_1920783	1700080G18Rik	NCBI_Gene:73533	MGI:1920783	protein coding gene	RIKEN cDNA 1700080G18 gene
6	gene	30.04799	30.15346	positive	MGI_C57BL6J_1332235	Nrf1	NCBI_Gene:18181,ENSEMBL:ENSMUSG00000058440	MGI:1332235	protein coding gene	nuclear respiratory factor 1
6	gene	30.14380	30.14413	negative	MGI_C57BL6J_5455357	Gm25580	ENSEMBL:ENSMUSG00000065343	MGI:5455357	unclassified non-coding RNA gene	predicted gene, 25580
6	gene	30.15864	30.17413	negative	MGI_C57BL6J_5475487	Mirc35hg	NCBI_Gene:101447999	MGI:5475487	lncRNA gene	microRNA cluster 35, host gene
6	gene	30.16592	30.16599	negative	MGI_C57BL6J_2676846	Mir182	miRBase:MI0000224,NCBI_Gene:387177,ENSEMBL:ENSMUSG00000076361	MGI:2676846	miRNA gene	microRNA 182
6	gene	30.16945	30.16955	negative	MGI_C57BL6J_3619440	Mir96	miRBase:MI0000583,NCBI_Gene:723886,ENSEMBL:ENSMUSG00000065586	MGI:3619440	miRNA gene	microRNA 96
6	gene	30.16967	30.16974	negative	MGI_C57BL6J_2676847	Mir183	miRBase:MI0000225,NCBI_Gene:387178,ENSEMBL:ENSMUSG00000065619	MGI:2676847	miRNA gene	microRNA 183
6	gene	30.17289	30.17513	positive	MGI_C57BL6J_5610274	Rncr4	ENSEMBL:ENSMUSG00000103108	MGI:5610274	lncRNA gene	retina expressed non-coding RNA 4
6	gene	30.17662	30.17805	positive	MGI_C57BL6J_3034268	BB283400	NCBI_Gene:100463519	MGI:3034268	lncRNA gene	expressed sequence BB283400
6	gene	30.17816	30.18183	positive	MGI_C57BL6J_5590380	Gm31221	NCBI_Gene:102633386	MGI:5590380	lncRNA gene	predicted gene, 31221
6	gene	30.21129	30.30454	negative	MGI_C57BL6J_104632	Ube2h	NCBI_Gene:22214,ENSEMBL:ENSMUSG00000039159	MGI:104632	protein coding gene	ubiquitin-conjugating enzyme E2H
6	gene	30.30460	30.33178	positive	MGI_C57BL6J_1920824	1700095J07Rik	ENSEMBL:ENSMUSG00000084861	MGI:1920824	lncRNA gene	RIKEN cDNA 1700095J07 gene
6	gene	30.34737	30.34747	negative	MGI_C57BL6J_5455402	Gm25625	ENSEMBL:ENSMUSG00000087846	MGI:5455402	rRNA gene	predicted gene, 25625
6	gene	30.36638	30.39104	negative	MGI_C57BL6J_1916023	Zc3hc1	NCBI_Gene:232679,ENSEMBL:ENSMUSG00000039130	MGI:1916023	protein coding gene	zinc finger, C3HC type 1
6	gene	30.37910	30.37921	positive	MGI_C57BL6J_4422025	n-R5s161	ENSEMBL:ENSMUSG00000065662	MGI:4422025	rRNA gene	nuclear encoded rRNA 5S 161
6	gene	30.40186	30.45518	positive	MGI_C57BL6J_1924038	Klhdc10	NCBI_Gene:76788,ENSEMBL:ENSMUSG00000029775	MGI:1924038	protein coding gene	kelch domain containing 10
6	gene	30.46013	30.46331	positive	MGI_C57BL6J_1916587	1700012C14Rik	NCBI_Gene:69337,ENSEMBL:ENSMUSG00000085470	MGI:1916587	lncRNA gene	RIKEN cDNA 1700012C14 gene
6	gene	30.47905	30.50978	negative	MGI_C57BL6J_1919899	Tmem209	NCBI_Gene:72649,ENSEMBL:ENSMUSG00000029782	MGI:1919899	protein coding gene	transmembrane protein 209
6	gene	30.50985	30.52025	positive	MGI_C57BL6J_1922897	Ssmem1	NCBI_Gene:75647,ENSEMBL:ENSMUSG00000029784	MGI:1922897	protein coding gene	serine-rich single-pass membrane protein 1
6	gene	30.54158	30.56448	positive	MGI_C57BL6J_3617840	Cpa2	NCBI_Gene:232680,ENSEMBL:ENSMUSG00000071553	MGI:3617840	protein coding gene	carboxypeptidase A2, pancreatic
6	gene	30.54764	30.55079	negative	MGI_C57BL6J_5826592	Gm46955	NCBI_Gene:108169136	MGI:5826592	lncRNA gene	predicted gene, 46955
6	gene	30.56837	30.59242	positive	MGI_C57BL6J_1919041	Cpa4	NCBI_Gene:71791,ENSEMBL:ENSMUSG00000039070	MGI:1919041	protein coding gene	carboxypeptidase A4
6	gene	30.57315	30.57604	negative	MGI_C57BL6J_3649768	Gm13781	ENSEMBL:ENSMUSG00000086854	MGI:3649768	lncRNA gene	predicted gene 13781
6	gene	30.59414	30.61093	negative	MGI_C57BL6J_5590612	Gm31453	NCBI_Gene:102633690	MGI:5590612	lncRNA gene	predicted gene, 31453
6	gene	30.61101	30.63174	positive	MGI_C57BL6J_1921899	Cpa5	NCBI_Gene:74649,ENSEMBL:ENSMUSG00000029788	MGI:1921899	protein coding gene	carboxypeptidase A5
6	gene	30.63922	30.64536	positive	MGI_C57BL6J_88478	Cpa1	NCBI_Gene:109697,ENSEMBL:ENSMUSG00000054446	MGI:88478	protein coding gene	carboxypeptidase A1, pancreatic
6	gene	30.65346	30.71052	negative	MGI_C57BL6J_1891414	Cep41	NCBI_Gene:83922,ENSEMBL:ENSMUSG00000029790	MGI:1891414	protein coding gene	centrosomal protein 41
6	gene	30.66745	30.68385	positive	MGI_C57BL6J_3649363	Gm13782	NCBI_Gene:102633925,ENSEMBL:ENSMUSG00000086542	MGI:3649363	lncRNA gene	predicted gene 13782
6	pseudogene	30.71987	30.72010	positive	MGI_C57BL6J_3705486	Gm14528	ENSEMBL:ENSMUSG00000083221	MGI:3705486	pseudogene	predicted gene 14528
6	gene	30.72355	30.74847	positive	MGI_C57BL6J_96968	Mest	NCBI_Gene:17294,ENSEMBL:ENSMUSG00000051855	MGI:96968	protein coding gene	mesoderm specific transcript
6	gene	30.73442	30.73465	positive	MGI_C57BL6J_5530904	Gm27522	ENSEMBL:ENSMUSG00000098260	MGI:5530904	unclassified non-coding RNA gene	predicted gene, 27522
6	gene	30.73503	30.73592	negative	MGI_C57BL6J_5690688	Gm44296	ENSEMBL:ENSMUSG00000107825	MGI:5690688	lncRNA gene	predicted gene, 44296
6	gene	30.73596	30.73606	positive	MGI_C57BL6J_5530950	Gm27568	ENSEMBL:ENSMUSG00000099073	MGI:5530950	unclassified non-coding RNA gene	predicted gene, 27568
6	gene	30.74130	30.74140	positive	MGI_C57BL6J_3619348	Mir335	miRBase:MI0000817,NCBI_Gene:723930,ENSEMBL:ENSMUSG00000065501	MGI:3619348	miRNA gene	microRNA 335
6	gene	30.74755	30.89683	negative	MGI_C57BL6J_1858683	Copg2	NCBI_Gene:54160,ENSEMBL:ENSMUSG00000025607	MGI:1858683	protein coding gene	coatomer protein complex, subunit gamma 2
6	gene	30.80478	30.80883	positive	MGI_C57BL6J_1858731	Copg2os2	NA	NA	unclassified non-coding RNA gene	coatomer protein complex%2c subunit gamma 2%2c opposite strand 2
6	gene	30.88567	30.89450	positive	MGI_C57BL6J_5621666	Gm38781	NCBI_Gene:105242616	MGI:5621666	lncRNA gene	predicted gene, 38781
6	gene	30.89690	30.94347	positive	MGI_C57BL6J_1921177	4930412F09Rik	NCBI_Gene:102633576,ENSEMBL:ENSMUSG00000085321	MGI:1921177	lncRNA gene	RIKEN cDNA 4930412F09 gene
6	gene	30.89698	30.92515	negative	MGI_C57BL6J_1891413	Tsga13	NCBI_Gene:116732,ENSEMBL:ENSMUSG00000039032	MGI:1891413	protein coding gene	testis specific gene A13
6	gene	30.95602	30.95908	negative	MGI_C57BL6J_3577024	Klf14	NCBI_Gene:619665,ENSEMBL:ENSMUSG00000073209	MGI:3577024	protein coding gene	Kruppel-like factor 14
6	gene	31.01007	31.01556	negative	MGI_C57BL6J_5623244	Gm40359	NCBI_Gene:105244822	MGI:5623244	lncRNA gene	predicted gene, 40359
6	gene	31.06266	31.06275	negative	MGI_C57BL6J_2676904	Mir29a	miRBase:MI0000576,NCBI_Gene:387222,ENSEMBL:ENSMUSG00000065610	MGI:2676904	miRNA gene	microRNA 29a
6	gene	31.06302	31.06309	negative	MGI_C57BL6J_2676905	Mir29b-1	miRBase:MI0000143,NCBI_Gene:387223,ENSEMBL:ENSMUSG00000065604	MGI:2676905	miRNA gene	microRNA 29b-1
6	gene	31.06309	31.06349	negative	MGI_C57BL6J_5504134	Gm27019	ENSEMBL:ENSMUSG00000097998	MGI:5504134	lncRNA gene	predicted gene, 27019
6	gene	31.08256	31.22049	negative	MGI_C57BL6J_2673128	Lncpint	NCBI_Gene:232685,ENSEMBL:ENSMUSG00000044471	MGI:2673128	lncRNA gene	long non-protein coding RNA, Trp53 induced transcript
6	gene	31.10285	31.10465	positive	MGI_C57BL6J_3650920	Gm13833	ENSEMBL:ENSMUSG00000087312	MGI:3650920	lncRNA gene	predicted gene 13833
6	gene	31.10883	31.11092	negative	MGI_C57BL6J_1923921	5330406M23Rik	ENSEMBL:ENSMUSG00000104030	MGI:1923921	unclassified gene	RIKEN cDNA 5330406M23 gene
6	pseudogene	31.14186	31.14273	negative	MGI_C57BL6J_3650921	Gm13835	NCBI_Gene:100038973,ENSEMBL:ENSMUSG00000086922	MGI:3650921	pseudogene	predicted gene 13835
6	gene	31.14513	31.14742	negative	MGI_C57BL6J_5610956	Gm37728	ENSEMBL:ENSMUSG00000103220	MGI:5610956	unclassified gene	predicted gene, 37728
6	gene	31.22035	31.33740	positive	MGI_C57BL6J_1920902	2210408F21Rik	NCBI_Gene:73652,ENSEMBL:ENSMUSG00000087380	MGI:1920902	lncRNA gene	RIKEN cDNA 2210408F21 gene
6	gene	31.24058	31.24396	negative	MGI_C57BL6J_5621667	Gm38782	NCBI_Gene:105242618	MGI:5621667	lncRNA gene	predicted gene, 38782
6	gene	31.28896	31.29169	positive	MGI_C57BL6J_5663937	Gm43800	ENSEMBL:ENSMUSG00000106867	MGI:5663937	unclassified gene	predicted gene 43800
6	gene	31.33063	31.33173	positive	MGI_C57BL6J_1925667	9530034D02Rik	NA	NA	unclassified gene	RIKEN cDNA 9530034D02 gene
6	gene	31.35633	31.37369	positive	MGI_C57BL6J_3705266	Gm14532	NCBI_Gene:102633651,ENSEMBL:ENSMUSG00000086931	MGI:3705266	lncRNA gene	predicted gene 14532
6	gene	31.36688	31.39877	negative	MGI_C57BL6J_3651306	Mkln1os	NCBI_Gene:100503869,ENSEMBL:ENSMUSG00000086212	MGI:3651306	lncRNA gene	muskelin 1, intracellular mediator containing kelch motifs, opposite strand
6	gene	31.37289	31.38388	positive	MGI_C57BL6J_3651305	Gm13844	ENSEMBL:ENSMUSG00000086855	MGI:3651305	lncRNA gene	predicted gene 13844
6	gene	31.39873	31.51681	positive	MGI_C57BL6J_1351638	Mkln1	NCBI_Gene:27418,ENSEMBL:ENSMUSG00000025609	MGI:1351638	protein coding gene	muskelin 1, intracellular mediator containing kelch motifs
6	gene	31.51949	31.56398	negative	MGI_C57BL6J_1351317	Podxl	NCBI_Gene:27205,ENSEMBL:ENSMUSG00000025608	MGI:1351317	protein coding gene	podocalyxin-like
6	gene	31.57473	31.57672	positive	MGI_C57BL6J_3647032	Gm6117	NCBI_Gene:105242621,ENSEMBL:ENSMUSG00000086732	MGI:3647032	lncRNA gene	predicted gene 6117
6	gene	31.60514	31.63577	positive	MGI_C57BL6J_5590645	Gm31486	NCBI_Gene:102633732	MGI:5590645	lncRNA gene	predicted gene, 31486
6	gene	31.60519	31.79805	positive	MGI_C57BL6J_5663291	Gm43154	ENSEMBL:ENSMUSG00000086804	MGI:5663291	lncRNA gene	predicted gene 43154
6	gene	31.65098	31.74309	positive	MGI_C57BL6J_3651995	Gm13846	NCBI_Gene:105242622	MGI:3651995	lncRNA gene	predicted gene 13846
6	gene	31.65817	31.66613	negative	MGI_C57BL6J_3651996	Gm13848	NCBI_Gene:434003,ENSEMBL:ENSMUSG00000084973	MGI:3651996	lncRNA gene	predicted gene 13848
6	gene	31.66640	31.68070	positive	MGI_C57BL6J_3651994	Gm13847	NCBI_Gene:102634036	MGI:3651994	lncRNA gene	predicted gene 13847
6	gene	31.70225	31.70699	negative	MGI_C57BL6J_5663430	Gm43293	ENSEMBL:ENSMUSG00000107010	MGI:5663430	lncRNA gene	predicted gene 43293
6	gene	31.78667	31.92227	positive	MGI_C57BL6J_3651992	Gm13849	ENSEMBL:ENSMUSG00000087379	MGI:3651992	lncRNA gene	predicted gene 13849
6	gene	32.01800	32.04093	positive	MGI_C57BL6J_5591053	Gm31894	NCBI_Gene:102634267	MGI:5591053	lncRNA gene	predicted gene, 31894
6	gene	32.05025	32.05892	positive	MGI_C57BL6J_1923632	1700012A03Rik	NCBI_Gene:76382,ENSEMBL:ENSMUSG00000029766	MGI:1923632	protein coding gene	RIKEN cDNA 1700012A03 gene
6	gene	32.11210	32.11753	positive	MGI_C57BL6J_3651993	Gm13850	NCBI_Gene:105242623,ENSEMBL:ENSMUSG00000085616	MGI:3651993	lncRNA gene	predicted gene 13850
6	gene	32.14427	32.58819	negative	MGI_C57BL6J_2179061	Plxna4	NCBI_Gene:243743,ENSEMBL:ENSMUSG00000029765	MGI:2179061	protein coding gene	plexin A4
6	gene	32.30383	32.31661	positive	MGI_C57BL6J_3651753	Plxna4os3	ENSEMBL:ENSMUSG00000086720	MGI:3651753	antisense lncRNA gene	plexin A4, opposite strand 3
6	gene	32.45117	32.45475	positive	MGI_C57BL6J_3045237	Plxna4os2	ENSEMBL:ENSMUSG00000086675	MGI:3045237	antisense lncRNA gene	plexin A4, opposite strand 2
6	gene	32.51107	32.51558	positive	MGI_C57BL6J_2442851	Plxna4os1	NCBI_Gene:319849,ENSEMBL:ENSMUSG00000086763	MGI:2442851	antisense lncRNA gene	plexin A4, opposite strand 1
6	gene	32.59825	32.63512	negative	MGI_C57BL6J_5826593	Gm46956	NCBI_Gene:108169137	MGI:5826593	lncRNA gene	predicted gene, 46956
6	pseudogene	32.61012	32.61036	positive	MGI_C57BL6J_3651754	Gm13852	ENSEMBL:ENSMUSG00000084386	MGI:3651754	pseudogene	predicted gene 13852
6	gene	32.63600	32.65722	negative	MGI_C57BL6J_5591166	Gm32007	NCBI_Gene:102634422	MGI:5591166	lncRNA gene	predicted gene, 32007
6	gene	32.75163	32.75229	negative	MGI_C57BL6J_3039568	BC049739	ENSEMBL:ENSMUSG00000106873	MGI:3039568	lncRNA gene	cDNA sequence BC049739
6	gene	32.79098	33.06028	negative	MGI_C57BL6J_1913325	Chchd3	NCBI_Gene:66075,ENSEMBL:ENSMUSG00000053768	MGI:1913325	protein coding gene	coiled-coil-helix-coiled-coil-helix domain containing 3
6	gene	32.95395	32.95495	negative	MGI_C57BL6J_1924889	C030041B07Rik	NA	NA	unclassified gene	RIKEN cDNA C030041B07 gene
6	gene	33.03847	33.04322	positive	MGI_C57BL6J_3705140	Gm14540	ENSEMBL:ENSMUSG00000085847	MGI:3705140	lncRNA gene	predicted gene 14540
6	gene	33.03912	33.04212	negative	MGI_C57BL6J_5663032	Gm42895	ENSEMBL:ENSMUSG00000106676	MGI:5663032	unclassified gene	predicted gene 42895
6	gene	33.08865	33.08875	negative	MGI_C57BL6J_5452098	Gm22321	ENSEMBL:ENSMUSG00000087777	MGI:5452098	snRNA gene	predicted gene, 22321
6	pseudogene	33.24727	33.24811	negative	MGI_C57BL6J_2686247	Gm1401	NCBI_Gene:102634733,ENSEMBL:ENSMUSG00000082217	MGI:2686247	pseudogene	predicted gene 1401
6	gene	33.24909	33.97398	positive	MGI_C57BL6J_1096376	Exoc4	NCBI_Gene:20336,ENSEMBL:ENSMUSG00000029763	MGI:1096376	protein coding gene	exocyst complex component 4
6	pseudogene	33.37511	33.37745	negative	MGI_C57BL6J_3651023	Gm13854	NCBI_Gene:100416262,ENSEMBL:ENSMUSG00000083728	MGI:3651023	pseudogene	predicted gene 13854
6	gene	33.43301	33.43462	positive	MGI_C57BL6J_5663305	Gm43168	ENSEMBL:ENSMUSG00000107358	MGI:5663305	unclassified gene	predicted gene 43168
6	gene	33.46412	33.47484	positive	MGI_C57BL6J_5621670	Gm38785	NCBI_Gene:105242624	MGI:5621670	lncRNA gene	predicted gene, 38785
6	gene	33.69003	33.69215	negative	MGI_C57BL6J_5663301	Gm43164	ENSEMBL:ENSMUSG00000107103	MGI:5663301	unclassified gene	predicted gene 43164
6	gene	33.84311	33.84495	positive	MGI_C57BL6J_1921750	5430439C14Rik	NA	NA	unclassified gene	RIKEN cDNA 5430439C14 gene
6	gene	33.98181	33.99248	negative	MGI_C57BL6J_3649279	Gm13853	NCBI_Gene:102634837,ENSEMBL:ENSMUSG00000087441	MGI:3649279	lncRNA gene	predicted gene 13853
6	gene	34.02241	34.02972	negative	MGI_C57BL6J_5621671	Gm38786	NCBI_Gene:105242625	MGI:5621671	lncRNA gene	predicted gene, 38786
6	gene	34.02899	34.13403	positive	MGI_C57BL6J_1921604	Lrguk	NCBI_Gene:74354,ENSEMBL:ENSMUSG00000056215	MGI:1921604	protein coding gene	leucine-rich repeats and guanylate kinase domain containing
6	gene	34.15193	34.17424	positive	MGI_C57BL6J_3652199	Gm13856	ENSEMBL:ENSMUSG00000087356	MGI:3652199	lncRNA gene	predicted gene 13856
6	gene	34.15338	34.17711	negative	MGI_C57BL6J_1931249	Slc35b4	NCBI_Gene:58246,ENSEMBL:ENSMUSG00000018999	MGI:1931249	protein coding gene	solute carrier family 35, member B4
6	gene	34.17717	34.18639	positive	MGI_C57BL6J_3652198	Gm13855	NCBI_Gene:105242626,ENSEMBL:ENSMUSG00000087613	MGI:3652198	lncRNA gene	predicted gene 13855
6	gene	34.19717	34.22708	positive	MGI_C57BL6J_5591692	Gm32533	NCBI_Gene:102635113	MGI:5591692	lncRNA gene	predicted gene, 32533
6	gene	34.29026	34.32425	positive	MGI_C57BL6J_3705210	Gm14546	ENSEMBL:ENSMUSG00000086762	MGI:3705210	lncRNA gene	predicted gene 14546
6	gene	34.30243	34.31749	negative	MGI_C57BL6J_1353494	Akr1b3	NCBI_Gene:11677,ENSEMBL:ENSMUSG00000001642	MGI:1353494	protein coding gene	aldo-keto reductase family 1, member B3 (aldose reductase)
6	gene	34.35412	34.36846	positive	MGI_C57BL6J_107673	Akr1b8	NCBI_Gene:14187,ENSEMBL:ENSMUSG00000029762	MGI:107673	protein coding gene	aldo-keto reductase family 1, member B8
6	pseudogene	34.36245	34.38045	negative	MGI_C57BL6J_3649681	Gm13858	NCBI_Gene:664942,ENSEMBL:ENSMUSG00000081196	MGI:3649681	pseudogene	predicted gene 13858
6	pseudogene	34.37369	34.38079	negative	MGI_C57BL6J_3649465	Gm13859	NCBI_Gene:100416263,ENSEMBL:ENSMUSG00000081991	MGI:3649465	pseudogene	predicted gene 13859
6	gene	34.38421	34.39696	positive	MGI_C57BL6J_1915111	Akr1b10	NCBI_Gene:67861,ENSEMBL:ENSMUSG00000061758	MGI:1915111	protein coding gene	aldo-keto reductase family 1, member B10 (aldose reductase)
6	gene	34.41233	34.42314	positive	MGI_C57BL6J_101918	Akr1b7	NCBI_Gene:11997,ENSEMBL:ENSMUSG00000052131	MGI:101918	protein coding gene	aldo-keto reductase family 1, member B7
6	pseudogene	34.41940	34.44544	negative	MGI_C57BL6J_3649688	Gm13857	NCBI_Gene:102635489,ENSEMBL:ENSMUSG00000084965	MGI:3649688	pseudogene	predicted gene 13857
6	gene	34.47621	34.50561	positive	MGI_C57BL6J_1098242	Bpgm	NCBI_Gene:12183,ENSEMBL:ENSMUSG00000038871	MGI:1098242	protein coding gene	2,3-bisphosphoglycerate mutase
6	gene	34.53355	34.54139	positive	MGI_C57BL6J_3649464	Gm13860	ENSEMBL:ENSMUSG00000085187	MGI:3649464	lncRNA gene	predicted gene 13860
6	gene	34.53406	34.53691	negative	MGI_C57BL6J_5592101	Gm32942	NCBI_Gene:102635662	MGI:5592101	lncRNA gene	predicted gene, 32942
6	gene	34.59850	34.77547	positive	MGI_C57BL6J_88250	Cald1	NCBI_Gene:109624,ENSEMBL:ENSMUSG00000029761	MGI:88250	protein coding gene	caldesmon 1
6	gene	34.65135	34.65433	negative	MGI_C57BL6J_3649466	Gm13861	NCBI_Gene:100039184,ENSEMBL:ENSMUSG00000085382	MGI:3649466	lncRNA gene	predicted gene 13861
6	gene	34.71229	34.71316	negative	MGI_C57BL6J_5621672	Gm38787	NCBI_Gene:105242628	MGI:5621672	lncRNA gene	predicted gene, 38787
6	gene	34.71480	34.71666	positive	MGI_C57BL6J_5012151	Gm19966	NA	NA	unclassified gene	predicted gene%2c 19966
6	gene	34.72667	34.72691	negative	MGI_C57BL6J_104972	Npn2	ENSEMBL:ENSMUSG00000060411	MGI:104972	lncRNA gene	neoplastic progression 2
6	gene	34.72722	34.73539	negative	MGI_C57BL6J_3705289	Gm14547	ENSEMBL:ENSMUSG00000086834	MGI:3705289	lncRNA gene	predicted gene 14547
6	gene	34.78043	34.85946	positive	MGI_C57BL6J_1923473	Agbl3	NCBI_Gene:76223,ENSEMBL:ENSMUSG00000038836	MGI:1923473	protein coding gene	ATP/GTP binding protein-like 3
6	pseudogene	34.78666	34.78751	positive	MGI_C57BL6J_3651491	Gm13864	NCBI_Gene:100384877,ENSEMBL:ENSMUSG00000082920	MGI:3651491	pseudogene	predicted gene 13864
6	pseudogene	34.81063	34.81083	negative	MGI_C57BL6J_3651503	Gm13862	ENSEMBL:ENSMUSG00000082118	MGI:3651503	pseudogene	predicted gene 13862
6	pseudogene	34.82020	34.82090	negative	MGI_C57BL6J_3652088	Gm13863	ENSEMBL:ENSMUSG00000082446	MGI:3652088	pseudogene	predicted gene 13863
6	gene	34.84134	34.84954	negative	MGI_C57BL6J_5826594	Gm46957	NCBI_Gene:108169138	MGI:5826594	lncRNA gene	predicted gene, 46957
6	gene	34.85970	34.86094	positive	MGI_C57BL6J_5663885	Gm43748	ENSEMBL:ENSMUSG00000106707	MGI:5663885	unclassified gene	predicted gene 43748
6	gene	34.86311	34.87495	positive	MGI_C57BL6J_1915737	Tmem140	NCBI_Gene:68487,ENSEMBL:ENSMUSG00000057137	MGI:1915737	protein coding gene	transmembrane protein 140
6	gene	34.87177	34.87806	negative	MGI_C57BL6J_1925662	Cyren	NCBI_Gene:78412,ENSEMBL:ENSMUSG00000046806	MGI:1925662	protein coding gene	cell cycle regulator of NHEJ
6	gene	34.87759	34.91089	negative	MGI_C57BL6J_2141558	Wdr91	NCBI_Gene:101240,ENSEMBL:ENSMUSG00000058486	MGI:2141558	protein coding gene	WD repeat domain 91
6	gene	34.92016	34.93934	positive	MGI_C57BL6J_107917	Stra8	NCBI_Gene:20899,ENSEMBL:ENSMUSG00000029848	MGI:107917	protein coding gene	stimulated by retinoic acid gene 8
6	gene	34.94528	34.98850	negative	MGI_C57BL6J_1917272	Slc23a4	NCBI_Gene:243753,ENSEMBL:ENSMUSG00000029847	MGI:1917272	protein coding gene	solute carrier family 23 member 4
6	gene	35.02206	35.13374	negative	MGI_C57BL6J_1859026	Cnot4	NCBI_Gene:53621,ENSEMBL:ENSMUSG00000038784	MGI:1859026	protein coding gene	CCR4-NOT transcription complex, subunit 4
6	gene	35.12152	35.12393	negative	MGI_C57BL6J_2443917	A230071A22Rik	NA	NA	unclassified gene	RIKEN cDNA A230071A22 gene
6	gene	35.13361	35.15214	positive	MGI_C57BL6J_5592205	Gm33046	NCBI_Gene:102635798	MGI:5592205	lncRNA gene	predicted gene, 33046
6	gene	35.17742	35.24760	positive	MGI_C57BL6J_2141625	Nup205	NCBI_Gene:70699,ENSEMBL:ENSMUSG00000038759	MGI:2141625	protein coding gene	nucleoporin 205
6	gene	35.24359	35.24375	positive	MGI_C57BL6J_5453212	Gm23435	ENSEMBL:ENSMUSG00000087808	MGI:5453212	snRNA gene	predicted gene, 23435
6	gene	35.25265	35.26350	positive	MGI_C57BL6J_1914955	1810058I24Rik	NCBI_Gene:67705,ENSEMBL:ENSMUSG00000073155	MGI:1914955	lncRNA gene	RIKEN cDNA 1810058I24 gene
6	gene	35.26795	35.30813	negative	MGI_C57BL6J_2442367	Slc13a4	NCBI_Gene:243755,ENSEMBL:ENSMUSG00000029843	MGI:2442367	protein coding gene	solute carrier family 13 (sodium/sulfate symporters), member 4
6	gene	35.31267	35.32614	negative	MGI_C57BL6J_3039626	Fam180a	NCBI_Gene:208164,ENSEMBL:ENSMUSG00000047420	MGI:3039626	protein coding gene	family with sequence similarity 180, member A
6	gene	35.31315	35.32232	positive	MGI_C57BL6J_5621673	Gm38788	NCBI_Gene:105242629	MGI:5621673	lncRNA gene	predicted gene, 38788
6	gene	35.33085	35.33683	positive	MGI_C57BL6J_1920659	1700065J11Rik	NCBI_Gene:73409,ENSEMBL:ENSMUSG00000107341	MGI:1920659	lncRNA gene	RIKEN cDNA 1700065J11 gene
6	gene	35.41280	35.41901	positive	MGI_C57BL6J_5621674	Gm38789	NCBI_Gene:105242630	MGI:5621674	lncRNA gene	predicted gene, 38789
6	gene	35.50882	35.53989	negative	MGI_C57BL6J_99445	Mtpn	NCBI_Gene:14489,ENSEMBL:ENSMUSG00000029840	MGI:99445	protein coding gene	myotrophin
6	gene	35.52454	35.52464	negative	MGI_C57BL6J_5452830	Gm23053	ENSEMBL:ENSMUSG00000095986	MGI:5452830	miRNA gene	predicted gene, 23053
6	gene	35.61109	35.61567	negative	MGI_C57BL6J_5663068	Gm42931	ENSEMBL:ENSMUSG00000107110	MGI:5663068	lncRNA gene	predicted gene 42931
6	gene	35.88328	35.88544	negative	MGI_C57BL6J_1921788	9030409K20Rik	NA	NA	unclassified gene	RIKEN cDNA 9030409K20 gene
6	pseudogene	35.92671	35.92712	positive	MGI_C57BL6J_5663579	Gm43442	ENSEMBL:ENSMUSG00000107145	MGI:5663579	pseudogene	predicted gene 43442
6	gene	35.96588	35.99970	negative	MGI_C57BL6J_5621675	Gm38790	NCBI_Gene:105242631	MGI:5621675	lncRNA gene	predicted gene, 38790
6	gene	35.97533	35.97546	positive	MGI_C57BL6J_5453050	Gm23273	ENSEMBL:ENSMUSG00000077246	MGI:5453050	snoRNA gene	predicted gene, 23273
6	gene	36.18671	36.18910	negative	MGI_C57BL6J_5592279	Gm33120	NA	NA	unclassified non-coding RNA gene	predicted gene%2c 33120
6	gene	36.18671	36.18910	negative	MGI_C57BL6J_5663580	Gm43443	ENSEMBL:ENSMUSG00000107089	MGI:5663580	unclassified gene	predicted gene 43443
6	gene	36.20962	36.39019	negative	MGI_C57BL6J_2442094	9330158H04Rik	NCBI_Gene:319472,ENSEMBL:ENSMUSG00000073154	MGI:2442094	lncRNA gene	RIKEN cDNA 9330158H04 gene
6	gene	36.38808	36.52864	positive	MGI_C57BL6J_88397	Chrm2	NCBI_Gene:243764,ENSEMBL:ENSMUSG00000045613	MGI:88397	protein coding gene	cholinergic receptor, muscarinic 2, cardiac
6	gene	36.42174	36.42182	positive	MGI_C57BL6J_3629662	Mir490	miRBase:MI0005002,NCBI_Gene:735279,ENSEMBL:ENSMUSG00000070075	MGI:3629662	miRNA gene	microRNA 490
6	gene	36.52502	36.52864	positive	MGI_C57BL6J_2444158	9330162L04Rik	NA	NA	unclassified gene	RIKEN cDNA 9330162L04 gene
6	pseudogene	36.58778	36.58798	positive	MGI_C57BL6J_5663578	Gm43441	ENSEMBL:ENSMUSG00000106817	MGI:5663578	pseudogene	predicted gene 43441
6	pseudogene	36.63981	36.64027	negative	MGI_C57BL6J_3780359	Gm2189	NCBI_Gene:100039370,ENSEMBL:ENSMUSG00000106872	MGI:3780359	pseudogene	predicted gene 2189
6	gene	36.69940	36.69954	positive	MGI_C57BL6J_5454888	Gm25111	ENSEMBL:ENSMUSG00000080336	MGI:5454888	miRNA gene	predicted gene, 25111
6	gene	36.71492	36.81136	negative	MGI_C57BL6J_97804	Ptn	NCBI_Gene:19242,ENSEMBL:ENSMUSG00000029838	MGI:97804	protein coding gene	pleiotrophin
6	gene	36.83738	37.30018	negative	MGI_C57BL6J_2443430	Dgki	NCBI_Gene:320127,ENSEMBL:ENSMUSG00000038665	MGI:2443430	protein coding gene	diacylglycerol kinase, iota
6	gene	36.84021	36.84399	negative	MGI_C57BL6J_2443216	6430604M11Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 6430604M11 gene
6	gene	36.93705	36.98578	positive	MGI_C57BL6J_1920835	1700111E14Rik	ENSEMBL:ENSMUSG00000029837	MGI:1920835	lncRNA gene	RIKEN cDNA 1700111E14 gene
6	pseudogene	36.95665	36.96043	positive	MGI_C57BL6J_3645151	Gm7452	NCBI_Gene:665024,ENSEMBL:ENSMUSG00000107310	MGI:3645151	pseudogene	predicted pseudogene 7452
6	gene	37.32726	37.44219	negative	MGI_C57BL6J_2442695	Creb3l2	NCBI_Gene:208647,ENSEMBL:ENSMUSG00000038648	MGI:2442695	protein coding gene	cAMP responsive element binding protein 3-like 2
6	gene	37.41819	37.41945	positive	MGI_C57BL6J_5592434	Gm33275	NCBI_Gene:102636112	MGI:5592434	lncRNA gene	predicted gene, 33275
6	gene	37.44250	37.44741	positive	MGI_C57BL6J_5592477	Gm33318	NCBI_Gene:102636178	MGI:5592477	lncRNA gene	predicted gene, 33318
6	gene	37.52643	37.53140	negative	MGI_C57BL6J_5592588	Gm33429	NCBI_Gene:102636331	MGI:5592588	lncRNA gene	predicted gene, 33429
6	gene	37.52998	37.57493	positive	MGI_C57BL6J_2384785	Akr1d1	NCBI_Gene:208665,ENSEMBL:ENSMUSG00000038641	MGI:2384785	protein coding gene	aldo-keto reductase family 1, member D1
6	pseudogene	37.54141	37.54199	positive	MGI_C57BL6J_3645336	Gm7463	NCBI_Gene:665046,ENSEMBL:ENSMUSG00000106889	MGI:3645336	pseudogene	predicted gene 7463
6	pseudogene	37.68564	37.68731	negative	MGI_C57BL6J_2137671	Ybx1-ps2	NCBI_Gene:94283,ENSEMBL:ENSMUSG00000107035	MGI:2137671	pseudogene	Y box protein 1, pseudogene 2
6	gene	37.71466	37.73438	positive	MGI_C57BL6J_5621676	Gm38791	NCBI_Gene:105242632	MGI:5621676	lncRNA gene	predicted gene, 38791
6	pseudogene	37.80597	37.80711	positive	MGI_C57BL6J_2151816	Atp6v0c-ps2	NCBI_Gene:100039636,ENSEMBL:ENSMUSG00000080242	MGI:2151816	pseudogene	ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2
6	pseudogene	37.86584	37.86656	negative	MGI_C57BL6J_3648381	Gm7492	NCBI_Gene:665102,ENSEMBL:ENSMUSG00000106853	MGI:3648381	pseudogene	predicted gene 7492
6	gene	37.86988	37.96845	positive	MGI_C57BL6J_109275	Trim24	NCBI_Gene:21848,ENSEMBL:ENSMUSG00000029833	MGI:109275	protein coding gene	tripartite motif-containing 24
6	gene	37.94102	37.94241	positive	MGI_C57BL6J_1918761	9030601B04Rik	NA	NA	unclassified gene	RIKEN cDNA 9030601B04 gene
6	gene	37.98374	38.04701	negative	MGI_C57BL6J_2444335	Svopl	NCBI_Gene:320590,ENSEMBL:ENSMUSG00000029830	MGI:2444335	protein coding gene	SV2 related protein homolog (rat)-like
6	pseudogene	37.99466	37.99532	negative	MGI_C57BL6J_5010586	Gm18401	NCBI_Gene:100417109	MGI:5010586	pseudogene	predicted gene, 18401
6	gene	38.03266	38.03551	positive	MGI_C57BL6J_5592653	Gm33494	NCBI_Gene:102636429	MGI:5592653	lncRNA gene	predicted gene, 33494
6	gene	38.04848	38.12459	negative	MGI_C57BL6J_2153480	Atp6v0a4	NCBI_Gene:140494,ENSEMBL:ENSMUSG00000038600	MGI:2153480	protein coding gene	ATPase, H+ transporting, lysosomal V0 subunit A4
6	gene	38.10925	38.11581	positive	MGI_C57BL6J_1924772	Tmem213	NCBI_Gene:77522,ENSEMBL:ENSMUSG00000029829	MGI:1924772	protein coding gene	transmembrane protein 213
6	gene	38.11838	38.11849	positive	MGI_C57BL6J_5453008	Gm23231	ENSEMBL:ENSMUSG00000087924	MGI:5453008	snRNA gene	predicted gene, 23231
6	gene	38.12317	38.25401	negative	MGI_C57BL6J_2669829	D630045J12Rik	NCBI_Gene:330286,ENSEMBL:ENSMUSG00000063455	MGI:2669829	protein coding gene	RIKEN cDNA D630045J12 gene
6	pseudogene	38.28444	38.28534	positive	MGI_C57BL6J_3643241	Gm7504	NCBI_Gene:665125,ENSEMBL:ENSMUSG00000107026	MGI:3643241	pseudogene	predicted gene 7504
6	gene	38.28739	38.29926	negative	MGI_C57BL6J_2443387	Zc3hav1l	NCBI_Gene:209032,ENSEMBL:ENSMUSG00000047749	MGI:2443387	protein coding gene	zinc finger CCCH-type, antiviral 1-like
6	gene	38.30529	38.35557	negative	MGI_C57BL6J_1926031	Zc3hav1	NCBI_Gene:78781,ENSEMBL:ENSMUSG00000029826	MGI:1926031	protein coding gene	zinc finger CCCH type, antiviral 1
6	pseudogene	38.36523	38.36590	negative	MGI_C57BL6J_5663715	Gm43578	ENSEMBL:ENSMUSG00000106836	MGI:5663715	pseudogene	predicted gene 43578
6	pseudogene	38.37674	38.37719	positive	MGI_C57BL6J_1321399	Rpl30-ps1	NCBI_Gene:19947,ENSEMBL:ENSMUSG00000057696	MGI:1321399	pseudogene	ribosomal protein L30, pseudogene 1
6	gene	38.38147	38.42765	positive	MGI_C57BL6J_2444853	Ttc26	NCBI_Gene:264134,ENSEMBL:ENSMUSG00000056832	MGI:2444853	protein coding gene	tetratricopeptide repeat domain 26
6	pseudogene	38.39627	38.39669	positive	MGI_C57BL6J_4414983	Gm16563	ENSEMBL:ENSMUSG00000089905	MGI:4414983	pseudogene	predicted gene 16563
6	gene	38.43304	38.43378	negative	MGI_C57BL6J_1919478	1700021L22Rik	NA	NA	unclassified gene	RIKEN cDNA 1700021L22 gene
6	gene	38.43393	38.52482	positive	MGI_C57BL6J_2444236	Ubn2	NCBI_Gene:320538,ENSEMBL:ENSMUSG00000038538	MGI:2444236	protein coding gene	ubinuclein 2
6	gene	38.44536	38.44705	positive	MGI_C57BL6J_2443652	E430026H10Rik	NA	NA	unclassified gene	RIKEN cDNA E430026H10 gene
6	gene	38.50733	38.50739	positive	MGI_C57BL6J_5531089	Mir7670	miRBase:MI0025010,NCBI_Gene:102466843,ENSEMBL:ENSMUSG00000098285	MGI:5531089	miRNA gene	microRNA 7670
6	gene	38.53258	38.53388	positive	MGI_C57BL6J_1920489	3110054G05Rik	NA	NA	unclassified gene	RIKEN cDNA 3110054G05 gene
6	gene	38.53350	38.53945	positive	MGI_C57BL6J_1913367	Fmc1	NCBI_Gene:66117,ENSEMBL:ENSMUSG00000019689	MGI:1913367	protein coding gene	formation of mitochondrial complex V assembly factor 1
6	gene	38.53393	38.53400	positive	MGI_C57BL6J_4413723	n-TRcct1	NCBI_Gene:102467248	MGI:4413723	tRNA gene	nuclear encoded tRNA arginine 1 (anticodon CCT)
6	pseudogene	38.54230	38.54610	negative	MGI_C57BL6J_3783138	Gm15697	NCBI_Gene:621228,ENSEMBL:ENSMUSG00000081670	MGI:3783138	pseudogene	predicted gene 15697
6	gene	38.55042	38.55125	negative	MGI_C57BL6J_2443093	D630014H12Rik	NA	NA	unclassified gene	RIKEN cDNA D630014H12 gene
6	gene	38.55133	38.60995	positive	MGI_C57BL6J_2183260	Luc7l2	NCBI_Gene:192196,ENSEMBL:ENSMUSG00000029823	MGI:2183260	protein coding gene	LUC7-like 2 (S. cerevisiae)
6	gene	38.55153	38.55401	negative	MGI_C57BL6J_5477193	Gm26699	ENSEMBL:ENSMUSG00000097206	MGI:5477193	lncRNA gene	predicted gene, 26699
6	gene	38.58236	38.58449	negative	MGI_C57BL6J_5012207	Gm20022	NA	NA	unclassified gene	predicted gene%2c 20022
6	gene	38.61005	38.61096	positive	MGI_C57BL6J_1924759	9330153N18Rik	NA	NA	unclassified gene	RIKEN cDNA 9330153N18 gene
6	gene	38.62141	38.63771	negative	MGI_C57BL6J_1921503	Klrg2	NCBI_Gene:74253,ENSEMBL:ENSMUSG00000071537	MGI:1921503	protein coding gene	killer cell lectin-like receptor subfamily G, member 2
6	gene	38.66307	38.68086	positive	MGI_C57BL6J_2141402	Clec2l	NCBI_Gene:665180,ENSEMBL:ENSMUSG00000079598	MGI:2141402	protein coding gene	C-type lectin domain family 2, member L
6	gene	38.68751	38.87619	negative	MGI_C57BL6J_1314872	Hipk2	NCBI_Gene:15258,ENSEMBL:ENSMUSG00000061436	MGI:1314872	protein coding gene	homeodomain interacting protein kinase 2
6	gene	38.69974	38.74190	positive	MGI_C57BL6J_5621381	Gm38496	NCBI_Gene:102637181	MGI:5621381	lncRNA gene	predicted gene, 38496
6	gene	38.75224	38.78048	positive	MGI_C57BL6J_2444621	4930502C15Rik	NCBI_Gene:320733	MGI:2444621	lncRNA gene	RIKEN cDNA 4930502C15 gene
6	gene	38.87538	39.08459	positive	MGI_C57BL6J_98497	Tbxas1	NCBI_Gene:21391,ENSEMBL:ENSMUSG00000029925	MGI:98497	protein coding gene	thromboxane A synthase 1, platelet
6	gene	38.87611	38.88505	positive	MGI_C57BL6J_5826625	Gm46988	NCBI_Gene:108169201	MGI:5826625	protein coding gene	predicted gene, 46988
6	gene	38.91710	38.98432	negative	MGI_C57BL6J_5621678	Gm38793	NA	NA	lncRNA gene	predicted gene%2c 38793
6	gene	38.91710	38.98432	negative	MGI_C57BL6J_5663099	Gm42962	ENSEMBL:ENSMUSG00000106737	MGI:5663099	lncRNA gene	predicted gene 42962
6	gene	38.94437	38.95028	negative	MGI_C57BL6J_5592926	Gm33767	NCBI_Gene:102636794	MGI:5592926	lncRNA gene	predicted gene, 33767
6	gene	38.98884	39.00644	negative	MGI_C57BL6J_5621573	Gm38688	NCBI_Gene:105242415	MGI:5621573	lncRNA gene	predicted gene, 38688
6	gene	39.01367	39.01379	positive	MGI_C57BL6J_5452787	Gm23010	ENSEMBL:ENSMUSG00000077339	MGI:5452787	snoRNA gene	predicted gene, 23010
6	gene	39.01920	39.04383	negative	MGI_C57BL6J_5621374	Gm38489	NCBI_Gene:102636584	MGI:5621374	lncRNA gene	predicted gene, 38489
6	gene	39.04417	39.05652	negative	MGI_C57BL6J_5826626	Gm46989	NCBI_Gene:108169202	MGI:5826626	lncRNA gene	predicted gene, 46989
6	gene	39.06388	39.06760	negative	MGI_C57BL6J_1917236	1700025N23Rik	NCBI_Gene:69986,ENSEMBL:ENSMUSG00000100121	MGI:1917236	lncRNA gene	RIKEN cDNA 1700025N23 gene
6	gene	39.08641	39.11835	negative	MGI_C57BL6J_2143990	Parp12	NCBI_Gene:243771,ENSEMBL:ENSMUSG00000038507	MGI:2143990	protein coding gene	poly (ADP-ribose) polymerase family, member 12
6	gene	39.11847	39.14831	positive	MGI_C57BL6J_1922629	4930599N23Rik	NCBI_Gene:75379,ENSEMBL:ENSMUSG00000073144	MGI:1922629	lncRNA gene	RIKEN cDNA 4930599N23 gene
6	gene	39.12517	39.12638	negative	MGI_C57BL6J_5663100	Gm42963	ENSEMBL:ENSMUSG00000106976	MGI:5663100	unclassified gene	predicted gene 42963
6	gene	39.13662	39.20679	negative	MGI_C57BL6J_2443388	Kdm7a	NCBI_Gene:338523,ENSEMBL:ENSMUSG00000042599	MGI:2443388	protein coding gene	lysine (K)-specific demethylase 7A
6	gene	39.20707	39.20761	positive	MGI_C57BL6J_6118414	Gm49041	ENSEMBL:ENSMUSG00000115026	MGI:6118414	lncRNA gene	predicted gene, 49041
6	gene	39.22756	39.24535	positive	MGI_C57BL6J_5621679	Gm38794	NCBI_Gene:105242635	MGI:5621679	lncRNA gene	predicted gene, 38794
6	gene	39.24011	39.24254	positive	MGI_C57BL6J_5663616	Gm43479	ENSEMBL:ENSMUSG00000107365	MGI:5663616	lncRNA gene	predicted gene 43479
6	gene	39.24615	39.26561	negative	MGI_C57BL6J_5593306	Gm34147	NCBI_Gene:102637300	MGI:5593306	lncRNA gene	predicted gene, 34147
6	gene	39.26565	39.29957	negative	MGI_C57BL6J_5455785	Gm26008	NCBI_Gene:102637404,ENSEMBL:ENSMUSG00000089422	MGI:5455785	snRNA gene	predicted gene, 26008
6	gene	39.33477	39.37772	negative	MGI_C57BL6J_1919394	Slc37a3	NCBI_Gene:72144,ENSEMBL:ENSMUSG00000029924	MGI:1919394	protein coding gene	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
6	gene	39.38117	39.39067	positive	MGI_C57BL6J_103292	Rab19	NCBI_Gene:19331,ENSEMBL:ENSMUSG00000029923	MGI:103292	protein coding gene	RAB19, member RAS oncogene family
6	gene	39.39780	39.42330	negative	MGI_C57BL6J_1859353	Mkrn1	NCBI_Gene:54484,ENSEMBL:ENSMUSG00000029922	MGI:1859353	protein coding gene	makorin, ring finger protein, 1
6	gene	39.41989	39.42129	positive	MGI_C57BL6J_3642504	Gm10244	NCBI_Gene:621427,ENSEMBL:ENSMUSG00000068601	MGI:3642504	lncRNA gene	predicted gene 10244
6	gene	39.42229	39.42242	negative	MGI_C57BL6J_5455179	Gm25402	ENSEMBL:ENSMUSG00000064900	MGI:5455179	snoRNA gene	predicted gene, 25402
6	gene	39.46237	39.55817	negative	MGI_C57BL6J_2444961	Dennd2a	NCBI_Gene:209773,ENSEMBL:ENSMUSG00000038456	MGI:2444961	protein coding gene	DENN/MADD domain containing 2A
6	gene	39.52751	39.54449	positive	MGI_C57BL6J_1924459	8030453O22Rik	NCBI_Gene:77209,ENSEMBL:ENSMUSG00000085058	MGI:1924459	lncRNA gene	RIKEN cDNA 8030453O22 gene
6	gene	39.57384	39.58877	positive	MGI_C57BL6J_1889336	Adck2	NCBI_Gene:57869,ENSEMBL:ENSMUSG00000046947	MGI:1889336	protein coding gene	aarF domain containing kinase 2
6	gene	39.58409	39.59278	negative	MGI_C57BL6J_3826603	Gm16272	ENSEMBL:ENSMUSG00000086582	MGI:3826603	lncRNA gene	predicted gene 16272
6	gene	39.58575	39.59660	positive	MGI_C57BL6J_5649067	Gm42420	ENSEMBL:ENSMUSG00000107071	MGI:5649067	protein coding gene	predicted gene, 42420
6	gene	39.59255	39.60338	positive	MGI_C57BL6J_1915448	Ndufb2	NCBI_Gene:68198,ENSEMBL:ENSMUSG00000002416	MGI:1915448	protein coding gene	NADH:ubiquinone oxidoreductase subunit B2
6	gene	39.60323	39.72566	negative	MGI_C57BL6J_88190	Braf	NCBI_Gene:109880,ENSEMBL:ENSMUSG00000002413	MGI:88190	protein coding gene	Braf transforming gene
6	gene	39.61650	39.62507	positive	MGI_C57BL6J_5593548	Gm34389	NCBI_Gene:102637627	MGI:5593548	lncRNA gene	predicted gene, 34389
6	pseudogene	39.65330	39.65396	negative	MGI_C57BL6J_104594	Fth-ps2	NCBI_Gene:14321,ENSEMBL:ENSMUSG00000091313	MGI:104594	pseudogene	ferritin heavy chain, pseudogene 2
6	gene	39.80180	39.81099	negative	MGI_C57BL6J_1338046	Mrps33	NCBI_Gene:14548,ENSEMBL:ENSMUSG00000029918	MGI:1338046	protein coding gene	mitochondrial ribosomal protein S33
6	gene	39.81018	39.81065	negative	MGI_C57BL6J_1925337	5730402E23Rik	NA	NA	unclassified gene	RIKEN cDNA 5730402E23 gene
6	pseudogene	39.82815	39.82881	negative	MGI_C57BL6J_3646122	Gm7554	NCBI_Gene:665247,ENSEMBL:ENSMUSG00000106936	MGI:3646122	pseudogene	predicted gene 7554
6	pseudogene	39.84302	39.84448	negative	MGI_C57BL6J_3645467	Gm7556	NCBI_Gene:665254,ENSEMBL:ENSMUSG00000106827	MGI:3645467	pseudogene	predicted gene 7556
6	gene	39.87068	40.25515	positive	MGI_C57BL6J_3647581	Tmem178b	NCBI_Gene:434008,ENSEMBL:ENSMUSG00000057716	MGI:3647581	protein coding gene	transmembrane protein 178B
6	gene	39.87153	39.87197	negative	MGI_C57BL6J_5477327	Gm26833	ENSEMBL:ENSMUSG00000097406	MGI:5477327	lncRNA gene	predicted gene, 26833
6	gene	40.02689	40.02861	positive	MGI_C57BL6J_5611223	Gm37995	ENSEMBL:ENSMUSG00000103331	MGI:5611223	unclassified gene	predicted gene, 37995
6	gene	40.09872	40.10117	positive	MGI_C57BL6J_5610901	Gm37673	ENSEMBL:ENSMUSG00000102623	MGI:5610901	unclassified gene	predicted gene, 37673
6	gene	40.11878	40.12948	positive	MGI_C57BL6J_5477132	Gm26638	ENSEMBL:ENSMUSG00000097563	MGI:5477132	lncRNA gene	predicted gene, 26638
6	gene	40.20330	40.20926	negative	MGI_C57BL6J_5477301	Gm26807	ENSEMBL:ENSMUSG00000097484	MGI:5477301	lncRNA gene	predicted gene, 26807
6	gene	40.22622	40.22904	positive	MGI_C57BL6J_5610231	Gm37003	ENSEMBL:ENSMUSG00000102287	MGI:5610231	unclassified gene	predicted gene, 37003
6	gene	40.32516	40.39756	positive	MGI_C57BL6J_1917173	Agk	NCBI_Gene:69923,ENSEMBL:ENSMUSG00000029916	MGI:1917173	protein coding gene	acylglycerol kinase
6	gene	40.40138	40.43649	negative	MGI_C57BL6J_2444256	E330009J07Rik	NCBI_Gene:243780,ENSEMBL:ENSMUSG00000037172	MGI:2444256	protein coding gene	RIKEN cDNA E330009J07 gene
6	gene	40.43540	40.46681	positive	MGI_C57BL6J_3027899	Wee2	NCBI_Gene:381759,ENSEMBL:ENSMUSG00000037159	MGI:3027899	protein coding gene	WEE1 homolog 2 (S. pombe)
6	gene	40.47054	40.47128	negative	MGI_C57BL6J_1925080	A930033M24Rik	NA	NA	unclassified gene	RIKEN cDNA A930033M24 gene
6	gene	40.47135	40.48470	positive	MGI_C57BL6J_1920040	Ssbp1	NCBI_Gene:381760,ENSEMBL:ENSMUSG00000029911	MGI:1920040	protein coding gene	single-stranded DNA binding protein 1
6	gene	40.49123	40.49231	positive	MGI_C57BL6J_3606604	Tas2r137	NCBI_Gene:574417,ENSEMBL:ENSMUSG00000052850	MGI:3606604	protein coding gene	taste receptor, type 2, member 137
6	gene	40.49353	40.49454	positive	MGI_C57BL6J_2681210	Tas2r108	NCBI_Gene:57253,ENSEMBL:ENSMUSG00000037140	MGI:2681210	protein coding gene	taste receptor, type 2, member 108
6	gene	40.51482	40.51955	negative	MGI_C57BL6J_1914940	Prss37	NCBI_Gene:67690,ENSEMBL:ENSMUSG00000029909	MGI:1914940	protein coding gene	protease, serine 37
6	pseudogene	40.52280	40.52322	negative	MGI_C57BL6J_5663432	Gm43295	ENSEMBL:ENSMUSG00000107359	MGI:5663432	pseudogene	predicted gene 43295
6	gene	40.54217	40.55505	negative	MGI_C57BL6J_3030295	Olfr461	NCBI_Gene:258380,ENSEMBL:ENSMUSG00000068259	MGI:3030295	protein coding gene	olfactory receptor 461
6	gene	40.56915	40.57434	positive	MGI_C57BL6J_3030294	Olfr460	NCBI_Gene:258381,ENSEMBL:ENSMUSG00000045514	MGI:3030294	protein coding gene	olfactory receptor 460
6	gene	40.57489	40.58582	negative	MGI_C57BL6J_1345151	Clec5a	NCBI_Gene:23845,ENSEMBL:ENSMUSG00000029915	MGI:1345151	protein coding gene	C-type lectin domain family 5, member a
6	gene	40.61232	40.61331	negative	MGI_C57BL6J_2681306	Tas2r138	NCBI_Gene:387513,ENSEMBL:ENSMUSG00000058250	MGI:2681306	protein coding gene	taste receptor, type 2, member 138
6	gene	40.62883	40.76912	positive	MGI_C57BL6J_1203495	Mgam	NCBI_Gene:232714,ENSEMBL:ENSMUSG00000068587	MGI:1203495	protein coding gene	maltase-glucoamylase
6	pseudogene	40.77871	40.86816	positive	MGI_C57BL6J_3645497	Mgam2-ps	NCBI_Gene:638904,ENSEMBL:ENSMUSG00000102802	MGI:3645497	pseudogene	maltase-glucoamylase 2, pseudogene
6	gene	40.87879	40.88749	negative	MGI_C57BL6J_2388042	Moxd2	NCBI_Gene:194357,ENSEMBL:ENSMUSG00000029885	MGI:2388042	protein coding gene	monooxygenase, DBH-like 2
6	gene	40.88953	40.89087	negative	MGI_C57BL6J_5611504	Gm38276	ENSEMBL:ENSMUSG00000104084	MGI:5611504	unclassified gene	predicted gene, 38276
6	gene	40.89123	40.89189	positive	MGI_C57BL6J_98594	Trbv1	NCBI_Gene:621968,ENSEMBL:ENSMUSG00000076461	MGI:98594	gene segment	T cell receptor beta, variable 1
6	gene	40.89526	40.90039	negative	MGI_C57BL6J_3608323	Prss58	NCBI_Gene:232717,ENSEMBL:ENSMUSG00000051936	MGI:3608323	protein coding gene	protease, serine 58
6	gene	40.92044	40.94097	negative	MGI_C57BL6J_1920731	1700074P13Rik	NCBI_Gene:73481,ENSEMBL:ENSMUSG00000029883	MGI:1920731	protein coding gene	RIKEN cDNA 1700074P13 gene
6	gene	40.94837	40.95435	negative	MGI_C57BL6J_3643181	Gm4744	NCBI_Gene:194360,ENSEMBL:ENSMUSG00000063252	MGI:3643181	protein coding gene	predicted gene 4744
6	gene	40.95022	40.95052	positive	MGI_C57BL6J_5580294	Gm29588	ENSEMBL:ENSMUSG00000101629	MGI:5580294	lncRNA gene	predicted gene 29588
6	gene	40.96475	40.96843	positive	MGI_C57BL6J_1920876	1810009J06Rik	NCBI_Gene:73626,ENSEMBL:ENSMUSG00000094808	MGI:1920876	protein coding gene	RIKEN cDNA 1810009J06 gene
6	gene	40.99582	40.99948	negative	MGI_C57BL6J_3780832	Gm2663	NCBI_Gene:100040208,ENSEMBL:ENSMUSG00000096525	MGI:3780832	protein coding gene	predicted gene 2663
6	pseudogene	41.01118	41.01137	negative	MGI_C57BL6J_5611243	Gm38015	ENSEMBL:ENSMUSG00000104408	MGI:5611243	pseudogene	predicted gene, 38015
6	pseudogene	41.02124	41.02188	negative	MGI_C57BL6J_5611106	Gm37878	ENSEMBL:ENSMUSG00000104105	MGI:5611106	pseudogene	predicted gene, 37878
6	pseudogene	41.02627	41.02665	positive	MGI_C57BL6J_5611522	Gm38294	ENSEMBL:ENSMUSG00000103157	MGI:5611522	pseudogene	predicted gene, 38294
6	gene	41.03027	41.03551	negative	MGI_C57BL6J_1914623	2210010C04Rik	NCBI_Gene:67373,ENSEMBL:ENSMUSG00000029882	MGI:1914623	protein coding gene	RIKEN cDNA 2210010C04 gene
6	gene	41.04734	41.04800	positive	MGI_C57BL6J_98599	Trbv2	NCBI_Gene:100124659,ENSEMBL:ENSMUSG00000076462	MGI:98599	gene segment	T cell receptor beta, variable 2
6	gene	41.04829	41.04883	positive	MGI_C57BL6J_98590	Trbv3	NCBI_Gene:100039790,ENSEMBL:ENSMUSG00000076463	MGI:98590	gene segment	T cell receptor beta, variable 3
6	gene	41.05588	41.06310	positive	MGI_C57BL6J_1923265	5830405F06Rik	ENSEMBL:ENSMUSG00000103586	MGI:1923265	lncRNA gene	RIKEN cDNA 5830405F06 gene
6	gene	41.05939	41.05989	positive	MGI_C57BL6J_98584	Trbv4	NCBI_Gene:100124660,ENSEMBL:ENSMUSG00000107486	MGI:98584	gene segment	T cell receptor beta, variable 10
6	gene	41.06233	41.06280	positive	MGI_C57BL6J_98583	Trbv5	NCBI_Gene:100124661,ENSEMBL:ENSMUSG00000076465	MGI:98583	gene segment	T cell receptor beta, variable 5
6	pseudogene	41.06687	41.06715	positive	MGI_C57BL6J_5009962	Trbv6	NCBI_Gene:100124662,ENSEMBL:ENSMUSG00000103807	MGI:5009962	pseudogenic gene segment	T cell receptor beta variable 6
6	pseudogene	41.08025	41.08065	positive	MGI_C57BL6J_5009963	Trbv7	NCBI_Gene:100124663,ENSEMBL:ENSMUSG00000102622	MGI:5009963	pseudogenic gene segment	T cell receptor beta variable 7
6	gene	41.08159	41.09198	positive	MGI_C57BL6J_6270568	Gm49885	ENSEMBL:ENSMUSG00000103833	MGI:6270568	lncRNA gene	predicted gene, 49885
6	pseudogene	41.08467	41.08511	positive	MGI_C57BL6J_5009964	Trbv8	NCBI_Gene:100124664,ENSEMBL:ENSMUSG00000102821	MGI:5009964	pseudogenic gene segment	T cell receptor beta variable 8
6	pseudogene	41.08799	41.08829	positive	MGI_C57BL6J_5009965	Trbv9	NCBI_Gene:100124665,ENSEMBL:ENSMUSG00000104198	MGI:5009965	pseudogenic gene segment	T cell receptor beta variable 9
6	pseudogene	41.09193	41.09223	positive	MGI_C57BL6J_4937160	Trbv10	NCBI_Gene:100124670,ENSEMBL:ENSMUSG00000091671	MGI:4937160	pseudogenic gene segment	T cell receptor beta variable 10
6	pseudogene	41.10681	41.10730	positive	MGI_C57BL6J_5009966	Trbv11	NCBI_Gene:100124671,ENSEMBL:ENSMUSG00000102903	MGI:5009966	pseudogenic gene segment	T cell receptor beta variable 11
6	gene	41.11355	41.11407	positive	MGI_C57BL6J_98602	Trbv12-1	NCBI_Gene:100124672,ENSEMBL:ENSMUSG00000095574	MGI:98602	gene segment	T cell receptor beta, variable 12-1
6	gene	41.11601	41.11647	positive	MGI_C57BL6J_98609	Trbv13-1	NCBI_Gene:100124673,ENSEMBL:ENSMUSG00000076467	MGI:98609	gene segment	T cell receptor beta, variable 13-1
6	gene	41.11885	41.11936	positive	MGI_C57BL6J_98601	Trbv12-2	NCBI_Gene:100124674,ENSEMBL:ENSMUSG00000094525	MGI:98601	gene segment	T cell receptor beta, variable 12-2
6	gene	41.12140	41.12183	positive	MGI_C57BL6J_98608	Trbv13-2	NCBI_Gene:100124675,ENSEMBL:ENSMUSG00000076469	MGI:98608	gene segment	T cell receptor beta, variable 13-2
6	pseudogene	41.12759	41.12808	positive	MGI_C57BL6J_98603	Trbv12-3	NCBI_Gene:100124676,ENSEMBL:ENSMUSG00000102327	MGI:98603	pseudogenic gene segment	T cell receptor beta, variable 12-3
6	gene	41.13015	41.13059	positive	MGI_C57BL6J_98607	Trbv13-3	NCBI_Gene:100124677,ENSEMBL:ENSMUSG00000076470	MGI:98607	gene segment	T cell receptor beta, variable 13-3
6	gene	41.13515	41.13562	positive	MGI_C57BL6J_98587	Trbv14	NCBI_Gene:100124678,ENSEMBL:ENSMUSG00000076471	MGI:98587	gene segment	T cell receptor beta, variable 14
6	gene	41.14119	41.14166	positive	MGI_C57BL6J_98586	Trbv15	NCBI_Gene:100124679,ENSEMBL:ENSMUSG00000076472	MGI:98586	gene segment	T cell receptor beta, variable 15
6	gene	41.15174	41.15223	positive	MGI_C57BL6J_98585	Trbv16	NCBI_Gene:100124680,ENSEMBL:ENSMUSG00000076473	MGI:98585	gene segment	T cell receptor beta, variable 16
6	gene	41.16306	41.16356	positive	MGI_C57BL6J_98610	Trbv17	NCBI_Gene:100124681,ENSEMBL:ENSMUSG00000076474	MGI:98610	gene segment	T cell receptor beta, variable 17
6	pseudogene	41.17514	41.17561	positive	MGI_C57BL6J_5009967	Trbv18	NCBI_Gene:100124682,ENSEMBL:ENSMUSG00000102409	MGI:5009967	pseudogenic gene segment	T cell receptor beta variable 18
6	gene	41.17838	41.17905	positive	MGI_C57BL6J_98604	Trbv19	NCBI_Gene:100124684,ENSEMBL:ENSMUSG00000076475	MGI:98604	gene segment	T cell receptor beta, variable 19
6	gene	41.18827	41.18898	positive	MGI_C57BL6J_98589	Trbv20	NCBI_Gene:100124685,ENSEMBL:ENSMUSG00000076476	MGI:98589	gene segment	T cell receptor beta, variable 20
6	gene	41.20255	41.20304	positive	MGI_C57BL6J_98593	Trbv21	NCBI_Gene:100124686,ENSEMBL:ENSMUSG00000076477	MGI:98593	gene segment	T cell receptor beta, variable 21
6	pseudogene	41.21207	41.21253	positive	MGI_C57BL6J_5009968	Trbv22	NCBI_Gene:100124687,ENSEMBL:ENSMUSG00000102988	MGI:5009968	pseudogenic gene segment	T cell receptor beta variable 22
6	gene	41.21607	41.21653	positive	MGI_C57BL6J_98595	Trbv23	NCBI_Gene:100124688,ENSEMBL:ENSMUSG00000076478	MGI:98595	gene segment	T cell receptor beta, variable V23
6	gene	41.21809	41.21856	positive	MGI_C57BL6J_98591	Trbv24	NCBI_Gene:100124689,ENSEMBL:ENSMUSG00000102955	MGI:98591	gene segment	T cell receptor beta, variable 24
6	pseudogene	41.22167	41.22221	positive	MGI_C57BL6J_5009969	Trbv25	NCBI_Gene:100124690,ENSEMBL:ENSMUSG00000104473	MGI:5009969	pseudogenic gene segment	T cell receptor beta variable 25
6	gene	41.22751	41.22799	positive	MGI_C57BL6J_98596	Trbv26	NCBI_Gene:110315,ENSEMBL:ENSMUSG00000076479	MGI:98596	gene segment	T cell receptor beta, variable 26
6	pseudogene	41.25323	41.25433	positive	MGI_C57BL6J_3780888	Gm2719	NCBI_Gene:100040333,ENSEMBL:ENSMUSG00000103042	MGI:3780888	pseudogene	predicted pseudogene 2719
6	pseudogene	41.25812	41.25858	positive	MGI_C57BL6J_5009970	Trbv27	NCBI_Gene:100124693,ENSEMBL:ENSMUSG00000104254	MGI:5009970	pseudogenic gene segment	T cell receptor beta variable 27
6	pseudogene	41.26670	41.26715	positive	MGI_C57BL6J_5009971	Trbv28	NCBI_Gene:100124694,ENSEMBL:ENSMUSG00000104326	MGI:5009971	pseudogenic gene segment	T cell receptor beta variable 28
6	pseudogene	41.27139	41.27188	positive	MGI_C57BL6J_98605	Trbv29	NCBI_Gene:100124698,ENSEMBL:ENSMUSG00000076480	MGI:98605	pseudogenic gene segment	T cell receptor beta, variable 29
6	gene	41.28138	41.28199	positive	MGI_C57BL6J_98592	Trbv30	NCBI_Gene:100124699,ENSEMBL:ENSMUSG00000076481	MGI:98592	gene segment	T cell receptor beta, variable 30
6	gene	41.30227	41.30553	positive	MGI_C57BL6J_102757	Try4	NCBI_Gene:22074,ENSEMBL:ENSMUSG00000054106	MGI:102757	protein coding gene	trypsin 4
6	pseudogene	41.30620	41.30676	negative	MGI_C57BL6J_5011149	Gm18964	NCBI_Gene:100418045,ENSEMBL:ENSMUSG00000103797	MGI:5011149	pseudogene	predicted gene, 18964
6	gene	41.31123	41.31684	negative	MGI_C57BL6J_102756	Try5	NCBI_Gene:103964,ENSEMBL:ENSMUSG00000036938	MGI:102756	protein coding gene	trypsin 5
6	gene	41.35410	41.35794	positive	MGI_C57BL6J_3687012	Try10	NCBI_Gene:436522,ENSEMBL:ENSMUSG00000071521	MGI:3687012	protein coding gene	trypsin 10
6	gene	41.37376	41.37768	negative	MGI_C57BL6J_102758	Prss3	NCBI_Gene:22073,ENSEMBL:ENSMUSG00000071519	MGI:102758	protein coding gene	protease, serine 3
6	gene	41.39236	41.39726	positive	MGI_C57BL6J_3646222	Gm5771	NCBI_Gene:436523,ENSEMBL:ENSMUSG00000058119	MGI:3646222	protein coding gene	predicted gene 5771
6	pseudogene	41.40508	41.41963	positive	MGI_C57BL6J_3643903	Gm5409	NCBI_Gene:386551,ENSEMBL:ENSMUSG00000059014	MGI:3643903	pseudogene	predicted pseudogene 5409
6	pseudogene	41.40691	41.40727	positive	MGI_C57BL6J_5611534	Gm38306	ENSEMBL:ENSMUSG00000103397	MGI:5611534	pseudogene	predicted gene, 38306
6	gene	41.44221	41.44615	negative	MGI_C57BL6J_3641889	Gm10334	NCBI_Gene:100040233,ENSEMBL:ENSMUSG00000071517	MGI:3641889	protein coding gene	predicted gene 10334
6	gene	41.45893	41.46379	positive	MGI_C57BL6J_98839	Prss1	NCBI_Gene:114228,ENSEMBL:ENSMUSG00000062751	MGI:98839	protein coding gene	protease, serine 1 (trypsin 1)
6	pseudogene	41.48051	41.48172	positive	MGI_C57BL6J_5610529	Gm37301	ENSEMBL:ENSMUSG00000102221	MGI:5610529	pseudogene	predicted gene, 37301
6	pseudogene	41.49338	41.49515	negative	MGI_C57BL6J_5588972	Gm29813	NCBI_Gene:101954205,ENSEMBL:ENSMUSG00000104513	MGI:5588972	pseudogene	predicted gene, 29813
6	pseudogene	41.49693	41.49730	positive	MGI_C57BL6J_5611069	Gm37841	ENSEMBL:ENSMUSG00000102616	MGI:5611069	pseudogene	predicted gene, 37841
6	pseudogene	41.50412	41.50565	positive	MGI_C57BL6J_5611246	Gm38018	ENSEMBL:ENSMUSG00000103699	MGI:5611246	pseudogene	predicted gene, 38018
6	gene	41.52178	41.52508	positive	MGI_C57BL6J_102759	Prss2	NCBI_Gene:22072,ENSEMBL:ENSMUSG00000057163	MGI:102759	protein coding gene	protease, serine 2
6	gene	41.53320	41.53321	positive	MGI_C57BL6J_4439571	Trbd1	NCBI_Gene:100125246,ENSEMBL:ENSMUSG00000095668	MGI:4439571	gene segment	T cell receptor beta, D region 1
6	gene	41.53386	41.53391	positive	MGI_C57BL6J_4439570	Trbj1-1	NCBI_Gene:100125248,ENSEMBL:ENSMUSG00000076483	MGI:4439570	gene segment	T cell receptor beta joining 1-1
6	gene	41.53400	41.53405	positive	MGI_C57BL6J_4439569	Trbj1-2	NCBI_Gene:100125249,ENSEMBL:ENSMUSG00000076484	MGI:4439569	gene segment	T cell receptor beta joining 1-2
6	gene	41.53432	41.53438	positive	MGI_C57BL6J_4439568	Trbj1-3	NCBI_Gene:100125250,ENSEMBL:ENSMUSG00000076485	MGI:4439568	gene segment	T cell receptor beta joining 1-3
6	gene	41.53481	41.53486	positive	MGI_C57BL6J_4439567	Trbj1-4	NCBI_Gene:100125251,ENSEMBL:ENSMUSG00000076486	MGI:4439567	gene segment	T cell receptor beta joining 1-4
6	gene	41.53508	41.53513	positive	MGI_C57BL6J_4439566	Trbj1-5	NCBI_Gene:100125252,ENSEMBL:ENSMUSG00000076487	MGI:4439566	gene segment	T cell receptor beta joining 1-5
6	gene	41.53555	41.53561	positive	MGI_C57BL6J_4439575	Trbj1-6	NCBI_Gene:100125253,ENSEMBL:ENSMUSG00000076488	MGI:4439575	gene segment	T cell receptor beta joining 1-6
6	gene	41.53564	41.53569	positive	MGI_C57BL6J_4439574	Trbj1-7	NCBI_Gene:100125254,ENSEMBL:ENSMUSG00000076489	MGI:4439574	gene segment	T cell receptor beta joining 1-7
6	gene	41.53822	41.53988	positive	MGI_C57BL6J_4439726	Trbc1	NCBI_Gene:100125262,ENSEMBL:ENSMUSG00000076490	MGI:4439726	gene segment	T cell receptor beta, constant region 1
6	gene	41.54216	41.54218	positive	MGI_C57BL6J_4439727	Trbd2	NCBI_Gene:100125247,ENSEMBL:ENSMUSG00000094569	MGI:4439727	gene segment	T cell receptor beta, D region 2
6	gene	41.54275	41.54280	positive	MGI_C57BL6J_4439728	Trbj2-1	NCBI_Gene:100125255,ENSEMBL:ENSMUSG00000076492	MGI:4439728	gene segment	T cell receptor beta joining 2-1
6	gene	41.54296	41.54301	positive	MGI_C57BL6J_4439729	Trbj2-2	NCBI_Gene:100125256,ENSEMBL:ENSMUSG00000076493	MGI:4439729	gene segment	T cell receptor beta joining 2-2
6	gene	41.54322	41.54327	positive	MGI_C57BL6J_4439898	Trbj2-3	NCBI_Gene:100125257,ENSEMBL:ENSMUSG00000076494	MGI:4439898	gene segment	T cell receptor beta joining 2-3
6	gene	41.54336	41.54341	positive	MGI_C57BL6J_4439730	Trbj2-4	NCBI_Gene:100125258,ENSEMBL:ENSMUSG00000076495	MGI:4439730	gene segment	T cell receptor beta joining 2-4
6	gene	41.54345	41.54350	positive	MGI_C57BL6J_4439899	Trbj2-5	NCBI_Gene:100125259,ENSEMBL:ENSMUSG00000076496	MGI:4439899	gene segment	T cell receptor beta joining 2-5
6	pseudogene	41.54360	41.54364	positive	MGI_C57BL6J_4937236	Trbj2-6	NCBI_Gene:100125260,ENSEMBL:ENSMUSG00000090818	MGI:4937236	pseudogenic gene segment	T cell receptor beta joining 2-6
6	gene	41.54381	41.54386	positive	MGI_C57BL6J_4439731	Trbj2-7	NCBI_Gene:100125261,ENSEMBL:ENSMUSG00000076497	MGI:4439731	gene segment	T cell receptor beta joining 2-7
6	gene	41.54673	41.54835	positive	MGI_C57BL6J_4835227	Trbc2	NCBI_Gene:100125263,ENSEMBL:ENSMUSG00000076498	MGI:4835227	gene segment	T cell receptor beta, constant 2
6	gene	41.55769	41.55845	negative	MGI_C57BL6J_98588	Trbv31	NCBI_Gene:269846,ENSEMBL:ENSMUSG00000076499	MGI:98588	gene segment	T cell receptor beta, variable 31
6	gene	41.55849	41.60345	positive	MGI_C57BL6J_5621467	Gm38582	NCBI_Gene:102641876	MGI:5621467	lncRNA gene	predicted gene, 38582
6	gene	41.56729	41.57071	positive	MGI_C57BL6J_2444452	B630006K09Rik	NA	NA	unclassified gene	RIKEN cDNA B630006K09 gene
6	gene	41.60224	41.60231	negative	MGI_C57BL6J_5530931	Gm27549	ENSEMBL:ENSMUSG00000098970	MGI:5530931	snRNA gene	predicted gene, 27549
6	gene	41.60504	41.62051	positive	MGI_C57BL6J_1096338	Ephb6	NCBI_Gene:13848,ENSEMBL:ENSMUSG00000029869	MGI:1096338	protein coding gene	Eph receptor B6
6	gene	41.62062	41.63641	negative	MGI_C57BL6J_1927259	Trpv6	NCBI_Gene:64177,ENSEMBL:ENSMUSG00000029868	MGI:1927259	protein coding gene	transient receptor potential cation channel, subfamily V, member 6
6	gene	41.62178	41.62406	positive	MGI_C57BL6J_5621680	Gm38795	NCBI_Gene:105242636	MGI:5621680	lncRNA gene	predicted gene, 38795
6	gene	41.64173	41.65880	positive	MGI_C57BL6J_5593801	Gm34642	NCBI_Gene:102637960	MGI:5593801	lncRNA gene	predicted gene, 34642
6	gene	41.65166	41.68145	negative	MGI_C57BL6J_2429764	Trpv5	NCBI_Gene:194352,ENSEMBL:ENSMUSG00000036899	MGI:2429764	protein coding gene	transient receptor potential cation channel, subfamily V, member 5
6	gene	41.68435	41.68572	positive	MGI_C57BL6J_1923856	Llcfc1	NCBI_Gene:76606,ENSEMBL:ENSMUSG00000029867	MGI:1923856	protein coding gene	LLLL and CFNLAS motif containing 1
6	gene	41.68633	41.70434	negative	MGI_C57BL6J_1346053	Kel	NCBI_Gene:23925,ENSEMBL:ENSMUSG00000029866	MGI:1346053	protein coding gene	Kell blood group
6	gene	41.69264	41.69619	negative	MGI_C57BL6J_5610755	Gm37527	ENSEMBL:ENSMUSG00000103788	MGI:5610755	unclassified gene	predicted gene, 37527
6	gene	41.70619	41.71014	positive	MGI_C57BL6J_5621681	Gm38796	NCBI_Gene:105242637	MGI:5621681	lncRNA gene	predicted gene, 38796
6	gene	41.76877	41.77518	negative	MGI_C57BL6J_3030293	Olfr459	NCBI_Gene:258569,ENSEMBL:ENSMUSG00000045479	MGI:3030293	protein coding gene	olfactory receptor 459
6	gene	41.84754	41.85207	positive	MGI_C57BL6J_102696	Pip	NCBI_Gene:18716,ENSEMBL:ENSMUSG00000058499	MGI:102696	protein coding gene	prolactin induced protein
6	gene	41.85299	41.86441	positive	MGI_C57BL6J_1934254	Sval2	NCBI_Gene:84543,ENSEMBL:ENSMUSG00000014104	MGI:1934254	protein coding gene	seminal vesicle antigen-like 2
6	gene	41.95163	41.95610	positive	MGI_C57BL6J_1918828	Sval1	NCBI_Gene:71578,ENSEMBL:ENSMUSG00000029865	MGI:1918828	protein coding gene	seminal vesicle antigen-like 1
6	gene	41.96814	41.97309	positive	MGI_C57BL6J_3047714	Sval3	NCBI_Gene:387564,ENSEMBL:ENSMUSG00000062833	MGI:3047714	protein coding gene	seminal vesicle antigen-like 3
6	gene	42.00990	42.03309	positive	MGI_C57BL6J_2141598	AU046084	NA	NA	unclassified gene	expressed sequence AU046084
6	gene	42.03839	42.04285	positive	MGI_C57BL6J_102785	Sva	NCBI_Gene:20939,ENSEMBL:ENSMUSG00000023289	MGI:102785	protein coding gene	seminal vesicle antigen
6	gene	42.10570	42.11452	negative	MGI_C57BL6J_5593860	Gm34701	NCBI_Gene:102638036,ENSEMBL:ENSMUSG00000107543	MGI:5593860	lncRNA gene	predicted gene, 34701
6	gene	42.14094	42.14189	positive	MGI_C57BL6J_2681308	Tas2r139	NCBI_Gene:353148,ENSEMBL:ENSMUSG00000047102	MGI:2681308	protein coding gene	taste receptor, type 2, member 139
6	gene	42.21533	42.21629	positive	MGI_C57BL6J_2681312	Tas2r144	NCBI_Gene:387515,ENSEMBL:ENSMUSG00000051917	MGI:2681312	protein coding gene	taste receptor, type 2, member 144
6	gene	42.24594	42.25045	positive	MGI_C57BL6J_1923513	Gstk1	NCBI_Gene:76263,ENSEMBL:ENSMUSG00000029864	MGI:1923513	protein coding gene	glutathione S-transferase kappa 1
6	gene	42.26192	42.26456	positive	MGI_C57BL6J_1924444	Tmem139	NCBI_Gene:109218,ENSEMBL:ENSMUSG00000071506	MGI:1924444	protein coding gene	transmembrane protein 139
6	gene	42.26490	42.28251	positive	MGI_C57BL6J_97295	Casp2	NCBI_Gene:12366,ENSEMBL:ENSMUSG00000029863	MGI:97295	protein coding gene	caspase 2
6	gene	42.27565	42.27573	positive	MGI_C57BL6J_5454885	Gm25108	ENSEMBL:ENSMUSG00000084422	MGI:5454885	snoRNA gene	predicted gene, 25108
6	gene	42.28260	42.31576	positive	MGI_C57BL6J_88417	Clcn1	NCBI_Gene:12723,ENSEMBL:ENSMUSG00000029862	MGI:88417	protein coding gene	chloride channel, voltage-sensitive 1
6	gene	42.31015	42.31303	negative	MGI_C57BL6J_5621682	Gm38797	NCBI_Gene:105242638	MGI:5621682	lncRNA gene	predicted gene, 38797
6	gene	42.31531	42.32464	negative	MGI_C57BL6J_1923406	Fam131b	NCBI_Gene:76156,ENSEMBL:ENSMUSG00000029861	MGI:1923406	protein coding gene	family with sequence similarity 131, member B
6	gene	42.32871	42.35086	negative	MGI_C57BL6J_5690676	Gm44284	ENSEMBL:ENSMUSG00000108033	MGI:5690676	lncRNA gene	predicted gene, 44284
6	gene	42.33768	42.33778	negative	MGI_C57BL6J_5454388	Gm24611	ENSEMBL:ENSMUSG00000065206	MGI:5454388	snRNA gene	predicted gene, 24611
6	gene	42.34962	42.36021	positive	MGI_C57BL6J_103072	Zyx	NCBI_Gene:22793,ENSEMBL:ENSMUSG00000029860	MGI:103072	protein coding gene	zyxin
6	gene	42.35849	42.37331	negative	MGI_C57BL6J_107381	Epha1	NCBI_Gene:13835,ENSEMBL:ENSMUSG00000029859	MGI:107381	protein coding gene	Eph receptor A1
6	gene	42.37067	42.38121	positive	MGI_C57BL6J_1919381	2010310C07Rik	NCBI_Gene:72131,ENSEMBL:ENSMUSG00000101268	MGI:1919381	lncRNA gene	RIKEN cDNA 2010310C07 gene
6	gene	42.40024	42.40112	positive	MGI_C57BL6J_2681310	Tas2r143	NCBI_Gene:387514,ENSEMBL:ENSMUSG00000046652	MGI:2681310	protein coding gene	taste receptor, type 2, member 143
6	gene	42.40543	42.40653	positive	MGI_C57BL6J_2681302	Tas2r135	NCBI_Gene:387512,ENSEMBL:ENSMUSG00000056203	MGI:2681302	protein coding gene	taste receptor, type 2, member 135
6	gene	42.43453	42.43546	positive	MGI_C57BL6J_2681273	Tas2r126	NCBI_Gene:387353,ENSEMBL:ENSMUSG00000048284	MGI:2681273	protein coding gene	taste receptor, type 2, member 126
6	pseudogene	42.44379	42.44393	negative	MGI_C57BL6J_5690862	Gm44470	ENSEMBL:ENSMUSG00000108150	MGI:5690862	pseudogene	predicted gene, 44470
6	pseudogene	42.44524	42.44591	negative	MGI_C57BL6J_5593977	Gm34818	NCBI_Gene:102638200	MGI:5593977	pseudogene	predicted gene, 34818
6	gene	42.45998	42.46520	negative	MGI_C57BL6J_3030292	Olfr458	NCBI_Gene:258436,ENSEMBL:ENSMUSG00000068574	MGI:3030292	protein coding gene	olfactory receptor 458
6	gene	42.46802	42.47633	negative	MGI_C57BL6J_3030291	Olfr457	NCBI_Gene:258989,ENSEMBL:ENSMUSG00000091983	MGI:3030291	protein coding gene	olfactory receptor 457
6	gene	42.48616	42.48721	negative	MGI_C57BL6J_3030290	Olfr456	NCBI_Gene:259144,ENSEMBL:ENSMUSG00000090631	MGI:3030290	protein coding gene	olfactory receptor 456
6	gene	42.50963	42.52147	positive	MGI_C57BL6J_5593911	Gm34752	NCBI_Gene:102638113	MGI:5593911	lncRNA gene	predicted gene, 34752
6	pseudogene	42.51947	42.52033	negative	MGI_C57BL6J_3779444	Gm4877	NCBI_Gene:232745,ENSEMBL:ENSMUSG00000078177	MGI:3779444	pseudogene	predicted gene 4877
6	gene	42.53566	42.54759	negative	MGI_C57BL6J_3030289	Olfr455	NCBI_Gene:546896,ENSEMBL:ENSMUSG00000071494	MGI:3030289	protein coding gene	olfactory receptor 455
6	gene	42.57823	42.58178	negative	MGI_C57BL6J_5621683	Gm38798	NCBI_Gene:105242639	MGI:5621683	lncRNA gene	predicted gene, 38798
6	gene	42.58487	42.59769	negative	MGI_C57BL6J_3042585	Tcaf3	NCBI_Gene:403088,ENSEMBL:ENSMUSG00000018656	MGI:3042585	protein coding gene	TRPM8 channel-associated factor 3
6	gene	42.62302	42.64525	negative	MGI_C57BL6J_2385258	Tcaf2	NCBI_Gene:232748,ENSEMBL:ENSMUSG00000029851	MGI:2385258	protein coding gene	TRPM8 channel-associated factor 2
6	gene	42.66800	42.71011	negative	MGI_C57BL6J_1914665	Tcaf1	NCBI_Gene:77574,ENSEMBL:ENSMUSG00000036667	MGI:1914665	protein coding gene	TRPM8 channel-associated factor 1
6	gene	42.69392	42.69576	negative	MGI_C57BL6J_5608918	B930083L10Rik	NA	NA	unclassified gene	Riken cDNA B930083L10 gene
6	pseudogene	42.72134	42.72226	positive	MGI_C57BL6J_3030288	Olfr454-ps1	NCBI_Gene:257777,ENSEMBL:ENSMUSG00000107986	MGI:3030288	pseudogene	olfactory receptor 454, pseudogene 1
6	pseudogene	42.72559	42.72602	positive	MGI_C57BL6J_5690422	Gm44030	ENSEMBL:ENSMUSG00000107416	MGI:5690422	pseudogene	predicted gene, 44030
6	pseudogene	42.73393	42.73410	negative	MGI_C57BL6J_5690424	Gm44032	ENSEMBL:ENSMUSG00000107650	MGI:5690424	pseudogene	predicted gene, 44032
6	gene	42.73937	42.74696	positive	MGI_C57BL6J_3030287	Olfr453	NCBI_Gene:258016,ENSEMBL:ENSMUSG00000095831	MGI:3030287	protein coding gene	olfactory receptor 453
6	pseudogene	42.74519	42.74525	positive	MGI_C57BL6J_5690426	Gm44034	ENSEMBL:ENSMUSG00000107818	MGI:5690426	pseudogene	predicted gene, 44034
6	gene	42.75640	42.76323	positive	MGI_C57BL6J_1313140	Olfr38	NCBI_Gene:258988,ENSEMBL:ENSMUSG00000095236	MGI:1313140	protein coding gene	olfactory receptor 38
6	gene	42.77557	42.77568	negative	MGI_C57BL6J_5452140	Gm22363	ENSEMBL:ENSMUSG00000065034	MGI:5452140	snRNA gene	predicted gene, 22363
6	gene	42.78509	42.79162	positive	MGI_C57BL6J_3030286	Olfr452	NCBI_Gene:258207,ENSEMBL:ENSMUSG00000094192	MGI:3030286	protein coding gene	olfactory receptor 452
6	pseudogene	42.80074	42.80168	positive	MGI_C57BL6J_3030285	Olfr451-ps1	NCBI_Gene:258017,ENSEMBL:ENSMUSG00000108058	MGI:3030285	polymorphic pseudogene	olfactory receptor 451, pseudogene 1
6	gene	42.81194	42.81908	positive	MGI_C57BL6J_3030284	Olfr450	NCBI_Gene:258437,ENSEMBL:ENSMUSG00000054431	MGI:3030284	protein coding gene	olfactory receptor 450
6	gene	42.83278	42.83288	positive	MGI_C57BL6J_5453759	Gm23982	ENSEMBL:ENSMUSG00000087766	MGI:5453759	snRNA gene	predicted gene, 23982
6	gene	42.83438	42.83952	positive	MGI_C57BL6J_3030283	Olfr449	NCBI_Gene:259067,ENSEMBL:ENSMUSG00000049168	MGI:3030283	protein coding gene	olfactory receptor 449
6	gene	42.89044	42.89908	positive	MGI_C57BL6J_3030282	Olfr448	NCBI_Gene:258270,ENSEMBL:ENSMUSG00000043119	MGI:3030282	protein coding gene	olfactory receptor 448
6	gene	42.90888	42.91427	positive	MGI_C57BL6J_3030281	Olfr447	NCBI_Gene:258990,ENSEMBL:ENSMUSG00000045708	MGI:3030281	protein coding gene	olfactory receptor 447
6	gene	42.92138	42.93114	positive	MGI_C57BL6J_3030280	Olfr446	NCBI_Gene:258292,ENSEMBL:ENSMUSG00000073111	MGI:3030280	protein coding gene	olfactory receptor 446
6	pseudogene	42.93407	42.93494	positive	MGI_C57BL6J_3030279	Olrf445-ps1	NCBI_Gene:257781,ENSEMBL:ENSMUSG00000108157	MGI:3030279	pseudogene	olfactory receptor 445, pseudogene 1
6	gene	42.94907	42.95676	positive	MGI_C57BL6J_3030278	Olfr444	NCBI_Gene:258650,ENSEMBL:ENSMUSG00000073110	MGI:3030278	protein coding gene	olfactory receptor 444
6	gene	42.98069	42.98115	positive	MGI_C57BL6J_4937106	Gm17472	ENSEMBL:ENSMUSG00000091008	MGI:4937106	gene segment	predicted gene, 17472
6	gene	43.01450	43.06690	negative	MGI_C57BL6J_5594064	Gm34905	NCBI_Gene:102638311	MGI:5594064	lncRNA gene	predicted gene, 34905
6	pseudogene	43.06731	43.09558	positive	MGI_C57BL6J_3030277	Olfr443-ps1	NCBI_Gene:258106,ENSEMBL:ENSMUSG00000091386	MGI:3030277	pseudogene	olfactory receptor 443, pseudogene 1
6	gene	43.06746	43.09046	positive	MGI_C57BL6J_5621684	Gm38799	NCBI_Gene:105242640	MGI:5621684	lncRNA gene	predicted gene, 38799
6	gene	43.08152	43.08210	negative	MGI_C57BL6J_5313039	Gm20730	ENSEMBL:ENSMUSG00000076500	MGI:5313039	gene segment	predicted gene, 20730
6	pseudogene	43.09911	43.09972	positive	MGI_C57BL6J_3030276	Olfr442-ps1	NCBI_Gene:257780,ENSEMBL:ENSMUSG00000108193	MGI:3030276	pseudogene	olfactory receptor 442, pseudogene 1
6	gene	43.10637	43.11780	positive	MGI_C57BL6J_3030275	Olfr441	NCBI_Gene:258649,ENSEMBL:ENSMUSG00000094669	MGI:3030275	protein coding gene	olfactory receptor 441
6	pseudogene	43.12235	43.12327	positive	MGI_C57BL6J_3030274	Olfr440-ps1	NCBI_Gene:258107,ENSEMBL:ENSMUSG00000107889	MGI:3030274	pseudogene	olfactory receptor 440, pseudogene 1
6	pseudogene	43.13783	43.13844	positive	MGI_C57BL6J_3030273	Olfr439-ps1	NCBI_Gene:257779,ENSEMBL:ENSMUSG00000108149	MGI:3030273	pseudogene	olfactory receptor 439, pseudogene 1
6	gene	43.14657	43.15717	positive	MGI_C57BL6J_3030071	Olfr237-ps1	NCBI_Gene:258648,ENSEMBL:ENSMUSG00000094200	MGI:3030071	protein coding gene	olfactory receptor 237, pseudogene 1
6	gene	43.16245	43.17486	negative	MGI_C57BL6J_1922770	1700024N05Rik	NCBI_Gene:75520	MGI:1922770	lncRNA gene	RIKEN cDNA 1700024N05 gene
6	gene	43.16328	43.16986	positive	MGI_C57BL6J_3030271	Olfr437	NCBI_Gene:258293,ENSEMBL:ENSMUSG00000071481	MGI:3030271	protein coding gene	olfactory receptor 437
6	gene	43.17214	43.17746	positive	MGI_C57BL6J_104812	Olfr13	NCBI_Gene:18310,ENSEMBL:ENSMUSG00000043605	MGI:104812	protein coding gene	olfactory receptor 13
6	pseudogene	43.18665	43.18770	positive	MGI_C57BL6J_3030270	Olfr436-ps1	NCBI_Gene:257778,ENSEMBL:ENSMUSG00000107469	MGI:3030270	pseudogene	olfactory receptor 436, pseudogene 1
6	gene	43.19715	43.20363	positive	MGI_C57BL6J_3030269	Olfr435	NCBI_Gene:258647,ENSEMBL:ENSMUSG00000048693	MGI:3030269	protein coding gene	olfactory receptor 435
6	pseudogene	43.21033	43.21075	positive	MGI_C57BL6J_5433991	Gm21827	ENSEMBL:ENSMUSG00000096158	MGI:5433991	pseudogene	predicted gene, 21827
6	gene	43.21302	43.21811	positive	MGI_C57BL6J_3030268	Olfr434	NCBI_Gene:258366,ENSEMBL:ENSMUSG00000059411	MGI:3030268	protein coding gene	olfactory receptor 434
6	gene	43.23153	43.23696	positive	MGI_C57BL6J_1333821	Olfr47	NCBI_Gene:18346,ENSEMBL:ENSMUSG00000061210	MGI:1333821	protein coding gene	olfactory receptor 47
6	gene	43.26454	43.26586	negative	MGI_C57BL6J_5753307	Gm44731	ENSEMBL:ENSMUSG00000108190	MGI:5753307	lncRNA gene	predicted gene 44731
6	gene	43.26558	43.28932	positive	MGI_C57BL6J_1858952	Arhgef5	NCBI_Gene:54324,ENSEMBL:ENSMUSG00000033542	MGI:1858952	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 5
6	gene	43.27775	43.27838	positive	MGI_C57BL6J_5690645	Gm44253	ENSEMBL:ENSMUSG00000107861	MGI:5690645	unclassified gene	predicted gene, 44253
6	gene	43.30367	43.31007	negative	MGI_C57BL6J_108011	Nobox	NCBI_Gene:18291,ENSEMBL:ENSMUSG00000029736	MGI:108011	protein coding gene	NOBOX oogenesis homeobox
6	gene	43.34500	43.66649	negative	MGI_C57BL6J_1352500	Tpk1	NCBI_Gene:29807,ENSEMBL:ENSMUSG00000029735	MGI:1352500	protein coding gene	thiamine pyrophosphokinase
6	pseudogene	43.37380	43.37555	positive	MGI_C57BL6J_3782999	Gm15550	NCBI_Gene:665747,ENSEMBL:ENSMUSG00000084325	MGI:3782999	pseudogene	predicted gene 15550
6	gene	43.37609	43.39253	positive	MGI_C57BL6J_5594272	Gm35113	NCBI_Gene:102638584	MGI:5594272	lncRNA gene	predicted gene, 35113
6	gene	43.41594	43.41867	positive	MGI_C57BL6J_5621685	Gm38800	NCBI_Gene:105242642	MGI:5621685	lncRNA gene	predicted gene, 38800
6	gene	43.44243	43.47432	positive	MGI_C57BL6J_2442776	9430018G01Rik	NCBI_Gene:319812,ENSEMBL:ENSMUSG00000107709	MGI:2442776	lncRNA gene	RIKEN cDNA 9430018G01 gene
6	gene	43.67881	43.67972	negative	MGI_C57BL6J_5826621	Gm46984	NCBI_Gene:108169189	MGI:5826621	lncRNA gene	predicted gene, 46984
6	pseudogene	43.76656	43.76732	negative	MGI_C57BL6J_3648301	Gm5990	NCBI_Gene:546897,ENSEMBL:ENSMUSG00000107465	MGI:3648301	pseudogene	predicted gene 5990
6	gene	43.83926	43.85238	positive	MGI_C57BL6J_5594322	Gm35163	NCBI_Gene:102638650	MGI:5594322	lncRNA gene	predicted gene, 35163
6	pseudogene	43.85608	43.85692	negative	MGI_C57BL6J_3643099	Gm7783	NCBI_Gene:665779,ENSEMBL:ENSMUSG00000107920	MGI:3643099	pseudogene	predicted gene 7783
6	gene	43.88719	43.88732	positive	MGI_C57BL6J_5452716	Gm22939	ENSEMBL:ENSMUSG00000077146	MGI:5452716	snoRNA gene	predicted gene, 22939
6	gene	44.08049	44.08338	negative	MGI_C57BL6J_5594375	Gm35216	NCBI_Gene:102638722,ENSEMBL:ENSMUSG00000107598	MGI:5594375	lncRNA gene	predicted gene, 35216
6	pseudogene	44.66729	44.66743	negative	MGI_C57BL6J_5690603	Gm44211	ENSEMBL:ENSMUSG00000107953	MGI:5690603	pseudogene	predicted gene, 44211
6	pseudogene	44.82157	44.82247	positive	MGI_C57BL6J_5690604	Gm44212	ENSEMBL:ENSMUSG00000107845	MGI:5690604	pseudogene	predicted gene, 44212
6	pseudogene	44.96592	44.96663	positive	MGI_C57BL6J_5690605	Gm44213	ENSEMBL:ENSMUSG00000107904	MGI:5690605	pseudogene	predicted gene, 44213
6	gene	45.05936	47.30421	positive	MGI_C57BL6J_1914047	Cntnap2	NCBI_Gene:66797,ENSEMBL:ENSMUSG00000039419	MGI:1914047	protein coding gene	contactin associated protein-like 2
6	gene	45.07357	45.07479	positive	MGI_C57BL6J_1925234	B230112I24Rik	ENSEMBL:ENSMUSG00000107729	MGI:1925234	unclassified gene	RIKEN cDNA B230112I24 gene
6	gene	45.08075	45.08451	positive	MGI_C57BL6J_5690271	Gm43879	ENSEMBL:ENSMUSG00000107858	MGI:5690271	unclassified gene	predicted gene, 43879
6	gene	45.13527	45.13748	positive	MGI_C57BL6J_5690264	Gm43872	ENSEMBL:ENSMUSG00000108070	MGI:5690264	unclassified gene	predicted gene, 43872
6	gene	45.19488	45.19742	positive	MGI_C57BL6J_5690277	Gm43885	ENSEMBL:ENSMUSG00000107643	MGI:5690277	unclassified gene	predicted gene, 43885
6	gene	45.20381	45.20749	positive	MGI_C57BL6J_5690281	Gm43889	ENSEMBL:ENSMUSG00000108146	MGI:5690281	unclassified gene	predicted gene, 43889
6	gene	45.22979	45.23377	positive	MGI_C57BL6J_2441759	9630039A02Rik	NA	NA	unclassified gene	RIKEN cDNA 9630039A02 gene
6	gene	45.24564	45.24843	positive	MGI_C57BL6J_5690266	Gm43874	ENSEMBL:ENSMUSG00000107779	MGI:5690266	unclassified gene	predicted gene, 43874
6	gene	45.30110	45.30251	positive	MGI_C57BL6J_5690261	Gm43869	ENSEMBL:ENSMUSG00000108008	MGI:5690261	unclassified gene	predicted gene, 43869
6	gene	45.30612	45.30739	positive	MGI_C57BL6J_1918013	6330419E04Rik	ENSEMBL:ENSMUSG00000107414	MGI:1918013	unclassified gene	RIKEN cDNA 6330419E04 gene
6	gene	45.32640	45.32867	positive	MGI_C57BL6J_5690274	Gm43882	ENSEMBL:ENSMUSG00000107433	MGI:5690274	unclassified gene	predicted gene, 43882
6	gene	45.32924	45.32980	positive	MGI_C57BL6J_5690276	Gm43884	ENSEMBL:ENSMUSG00000108123	MGI:5690276	unclassified gene	predicted gene, 43884
6	gene	45.41324	45.41540	positive	MGI_C57BL6J_5690272	Gm43880	ENSEMBL:ENSMUSG00000107886	MGI:5690272	unclassified gene	predicted gene, 43880
6	gene	45.52908	45.53231	positive	MGI_C57BL6J_5690268	Gm43876	ENSEMBL:ENSMUSG00000108055	MGI:5690268	unclassified gene	predicted gene, 43876
6	pseudogene	45.89447	45.89503	negative	MGI_C57BL6J_5010668	Gm18483	NCBI_Gene:100417253	MGI:5010668	pseudogene	predicted gene, 18483
6	gene	45.90194	45.90432	positive	MGI_C57BL6J_5690278	Gm43886	ENSEMBL:ENSMUSG00000107515	MGI:5690278	unclassified gene	predicted gene, 43886
6	gene	46.03778	46.03808	positive	MGI_C57BL6J_5452616	Gm22839	ENSEMBL:ENSMUSG00000089061	MGI:5452616	unclassified non-coding RNA gene	predicted gene, 22839
6	gene	46.04195	46.04391	positive	MGI_C57BL6J_5690263	Gm43871	ENSEMBL:ENSMUSG00000107913	MGI:5690263	unclassified gene	predicted gene, 43871
6	gene	46.04514	46.04908	positive	MGI_C57BL6J_5690265	Gm43873	ENSEMBL:ENSMUSG00000107606	MGI:5690265	unclassified gene	predicted gene, 43873
6	gene	46.04916	46.05139	positive	MGI_C57BL6J_5690269	Gm43877	ENSEMBL:ENSMUSG00000107571	MGI:5690269	unclassified gene	predicted gene, 43877
6	gene	46.07241	46.07500	positive	MGI_C57BL6J_5690280	Gm43888	ENSEMBL:ENSMUSG00000107782	MGI:5690280	unclassified gene	predicted gene, 43888
6	gene	46.07618	46.07936	positive	MGI_C57BL6J_5690279	Gm43887	ENSEMBL:ENSMUSG00000108189	MGI:5690279	unclassified gene	predicted gene, 43887
6	gene	46.13410	46.13847	positive	MGI_C57BL6J_5690262	Gm43870	ENSEMBL:ENSMUSG00000107712	MGI:5690262	unclassified gene	predicted gene, 43870
6	gene	46.41376	46.41629	positive	MGI_C57BL6J_5690273	Gm43881	ENSEMBL:ENSMUSG00000107442	MGI:5690273	unclassified gene	predicted gene, 43881
6	gene	46.48171	46.48184	negative	MGI_C57BL6J_5454938	Gm25161	ENSEMBL:ENSMUSG00000089538	MGI:5454938	snoRNA gene	predicted gene, 25161
6	gene	46.48664	46.48912	positive	MGI_C57BL6J_5690267	Gm43875	ENSEMBL:ENSMUSG00000107454	MGI:5690267	unclassified gene	predicted gene, 43875
6	pseudogene	46.52935	46.53079	negative	MGI_C57BL6J_96525	Rbpj-ps3	NCBI_Gene:19667,ENSEMBL:ENSMUSG00000079575	MGI:96525	pseudogene	recombination signal binding protein for immunoglobulin kappa J region, pseudogene 3
6	pseudogene	46.63725	46.63830	negative	MGI_C57BL6J_5010669	Gm18484	NCBI_Gene:100417254,ENSEMBL:ENSMUSG00000107725	MGI:5010669	pseudogene	predicted gene, 18484
6	pseudogene	46.77073	46.77965	negative	MGI_C57BL6J_5595090	Gm35931	NCBI_Gene:105242644,ENSEMBL:ENSMUSG00000107532	MGI:5595090	pseudogene	predicted gene, 35931
6	gene	46.78595	46.78970	positive	MGI_C57BL6J_5690275	Gm43883	ENSEMBL:ENSMUSG00000108217	MGI:5690275	unclassified gene	predicted gene, 43883
6	gene	46.95238	46.95823	negative	MGI_C57BL6J_5621686	Gm38801	NCBI_Gene:105242643	MGI:5621686	lncRNA gene	predicted gene, 38801
6	gene	47.00655	47.04080	negative	MGI_C57BL6J_5595034	Gm35875	NCBI_Gene:102639602	MGI:5595034	lncRNA gene	predicted gene, 35875
6	pseudogene	47.04516	47.04629	positive	MGI_C57BL6J_3647816	Gm6352	NCBI_Gene:622745,ENSEMBL:ENSMUSG00000107952	MGI:3647816	pseudogene	predicted gene 6352
6	gene	47.12001	47.12496	negative	MGI_C57BL6J_5594957	Gm35798	NCBI_Gene:102639497	MGI:5594957	lncRNA gene	predicted gene, 35798
6	gene	47.13921	47.16423	negative	MGI_C57BL6J_1915519	4930432J01Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 4930432J01 gene
6	gene	47.19138	47.25916	negative	MGI_C57BL6J_5594439	Gm35280	NCBI_Gene:102638803	MGI:5594439	lncRNA gene	predicted gene, 35280
6	gene	47.22750	47.23058	positive	MGI_C57BL6J_5594724	Gm35565	NCBI_Gene:102639203	MGI:5594724	lncRNA gene	predicted gene, 35565
6	pseudogene	47.43212	47.43309	negative	MGI_C57BL6J_5010769	Gm18584	NCBI_Gene:100417389,ENSEMBL:ENSMUSG00000107853	MGI:5010769	pseudogene	predicted gene, 18584
6	gene	47.45340	47.52614	positive	MGI_C57BL6J_1349658	Cul1	NCBI_Gene:26965,ENSEMBL:ENSMUSG00000029686	MGI:1349658	protein coding gene	cullin 1
6	gene	47.45378	47.45432	negative	MGI_C57BL6J_2445106	A930035D04Rik	ENSEMBL:ENSMUSG00000052241	MGI:2445106	lncRNA gene	RIKEN cDNA A930035D04 gene
6	gene	47.53014	47.59534	negative	MGI_C57BL6J_107940	Ezh2	NCBI_Gene:14056,ENSEMBL:ENSMUSG00000029687	MGI:107940	protein coding gene	enhancer of zeste 2 polycomb repressive complex 2 subunit
6	gene	47.54667	47.55170	positive	MGI_C57BL6J_5477119	Gm26625	ENSEMBL:ENSMUSG00000097138	MGI:5477119	lncRNA gene	predicted gene, 26625
6	pseudogene	47.58522	47.58541	positive	MGI_C57BL6J_5690674	Gm44282	ENSEMBL:ENSMUSG00000107628	MGI:5690674	pseudogene	predicted gene, 44282
6	gene	47.59519	47.59753	positive	MGI_C57BL6J_2442048	F830010H11Rik	NA	NA	unclassified gene	RIKEN cDNA F830010H11 gene
6	gene	47.63530	47.63688	positive	MGI_C57BL6J_5690533	Gm44141	ENSEMBL:ENSMUSG00000108180	MGI:5690533	unclassified gene	predicted gene, 44141
6	gene	47.63714	47.63722	positive	MGI_C57BL6J_5455060	Gm25283	ENSEMBL:ENSMUSG00000087897	MGI:5455060	unclassified non-coding RNA gene	predicted gene, 25283
6	gene	47.64461	47.65185	negative	MGI_C57BL6J_5623256	Gm40371	NCBI_Gene:105244835	MGI:5623256	lncRNA gene	predicted gene, 40371
6	gene	47.65213	47.65612	positive	MGI_C57BL6J_5623254	Gm40369	NCBI_Gene:105244833	MGI:5623254	protein coding gene	predicted gene, 40369
6	gene	47.65492	47.65509	negative	MGI_C57BL6J_97946	Rn4.5s	NCBI_Gene:19799	MGI:97946	rRNA gene	4.5S RNA
6	gene	47.65637	47.66043	positive	MGI_C57BL6J_5623253	Gm40368	NCBI_Gene:105244832	MGI:5623253	protein coding gene	predicted gene, 40368
6	gene	47.66068	47.66479	positive	MGI_C57BL6J_5623252	Gm40367	NCBI_Gene:105244831	MGI:5623252	protein coding gene	predicted gene, 40367
6	gene	47.66504	47.66912	positive	MGI_C57BL6J_5595663	Gm36504	NCBI_Gene:102640444	MGI:5595663	protein coding gene	predicted gene, 36504
6	gene	47.66937	47.67345	positive	MGI_C57BL6J_5623250	Gm40365	NCBI_Gene:105244829	MGI:5623250	protein coding gene	predicted gene, 40365
6	gene	47.67369	47.67777	positive	MGI_C57BL6J_5595486	Gm36327	NCBI_Gene:102640203	MGI:5595486	protein coding gene	predicted gene, 36327
6	gene	47.67802	47.68209	positive	MGI_C57BL6J_5623249	Gm40364	NCBI_Gene:105244828	MGI:5623249	protein coding gene	predicted gene, 40364
6	gene	47.68234	47.73833	positive	MGI_C57BL6J_5623248	Gm40363	NCBI_Gene:105244826	MGI:5623248	protein coding gene	predicted gene, 40363
6	gene	47.76221	47.77309	positive	MGI_C57BL6J_5595832	Gm36673	NCBI_Gene:102640659	MGI:5595832	lncRNA gene	predicted gene, 36673
6	gene	47.78162	47.78173	positive	MGI_C57BL6J_107304	Rny3	NCBI_Gene:19874,ENSEMBL:ENSMUSG00000064945	MGI:107304	scRNA gene	RNA, Y3 small cytoplasmic (associated with Ro protein)
6	pseudogene	47.78596	47.78637	negative	MGI_C57BL6J_3648986	Rpl31-ps7	NCBI_Gene:384379,ENSEMBL:ENSMUSG00000097255	MGI:3648986	pseudogene	ribosomal protein L31, pseudogene 7
6	gene	47.78807	47.78818	negative	MGI_C57BL6J_97995	Rny1	NCBI_Gene:19872,ENSEMBL:ENSMUSG00000065701	MGI:97995	scRNA gene	RNA, Y1 small cytoplasmic, Ro-associated
6	gene	47.79609	47.81351	negative	MGI_C57BL6J_104864	Pdia4	NCBI_Gene:12304,ENSEMBL:ENSMUSG00000025823	MGI:104864	protein coding gene	protein disulfide isomerase associated 4
6	gene	47.80358	47.80365	negative	MGI_C57BL6J_3629672	Mir704	miRBase:MI0004688,NCBI_Gene:735289,ENSEMBL:ENSMUSG00000076060	MGI:3629672	miRNA gene	microRNA 704
6	pseudogene	47.81526	47.81569	negative	MGI_C57BL6J_3781346	Rpl35a-ps7	NCBI_Gene:100041154,ENSEMBL:ENSMUSG00000094557	MGI:3781346	pseudogene	ribosomal protein L35A, pseudogene 7
6	gene	47.81926	47.83556	negative	MGI_C57BL6J_3026883	Zfp786	NCBI_Gene:330301,ENSEMBL:ENSMUSG00000051499	MGI:3026883	protein coding gene	zinc finger protein 786
6	gene	47.83566	47.87354	positive	MGI_C57BL6J_1917856	Zfp398	NCBI_Gene:272347,ENSEMBL:ENSMUSG00000062519	MGI:1917856	protein coding gene	zinc finger protein 398
6	pseudogene	47.84774	47.84814	positive	MGI_C57BL6J_5690433	Gm44041	ENSEMBL:ENSMUSG00000107604	MGI:5690433	pseudogene	predicted gene, 44041
6	gene	47.87720	47.90848	positive	MGI_C57BL6J_2141413	Zfp282	NCBI_Gene:101095,ENSEMBL:ENSMUSG00000025821	MGI:2141413	protein coding gene	zinc finger protein 282
6	gene	47.92048	47.93264	positive	MGI_C57BL6J_2682609	Zfp212	NCBI_Gene:232784,ENSEMBL:ENSMUSG00000052763	MGI:2682609	protein coding gene	Zinc finger protein 212
6	pseudogene	47.94317	47.95591	positive	MGI_C57BL6J_3040704	Zfp783	NCBI_Gene:232785,ENSEMBL:ENSMUSG00000072653	MGI:3040704	pseudogene	zinc finger protein 783
6	gene	47.95339	47.96530	positive	MGI_C57BL6J_2141515	Zfp956	NCBI_Gene:101197,ENSEMBL:ENSMUSG00000045466	MGI:2141515	protein coding gene	zinc finger protein 956
6	pseudogene	47.97699	47.97790	negative	MGI_C57BL6J_3646734	Gm6443	NCBI_Gene:623601,ENSEMBL:ENSMUSG00000107824	MGI:3646734	pseudogene	predicted gene 6443
6	gene	47.97900	47.97907	positive	MGI_C57BL6J_4413824	n-TCgca57	NCBI_Gene:102467643	MGI:4413824	tRNA gene	nuclear encoded tRNA cysteine 57 (anticodon GCA)
6	gene	48.01766	48.05000	negative	MGI_C57BL6J_1919556	Zfp777	NCBI_Gene:72306,ENSEMBL:ENSMUSG00000071477	MGI:1919556	protein coding gene	zinc finger protein 777
6	gene	48.04555	48.04595	negative	MGI_C57BL6J_5804853	Gm45738	ENSEMBL:ENSMUSG00000108101	MGI:5804853	lncRNA gene	predicted gene 45738
6	gene	48.04870	48.04879	positive	MGI_C57BL6J_5454340	Gm24563	ENSEMBL:ENSMUSG00000092928	MGI:5454340	miRNA gene	predicted gene, 24563
6	gene	48.06239	48.08669	negative	MGI_C57BL6J_1916478	Zfp746	NCBI_Gene:69228,ENSEMBL:ENSMUSG00000057691	MGI:1916478	protein coding gene	zinc finger protein 746
6	gene	48.06595	48.06605	positive	MGI_C57BL6J_3629706	Gt(pU21)138Imeg	NA	NA	unclassified gene	gene trap 138%2c Institute of Molecular Embryology and Genetics
6	gene	48.12866	48.39541	negative	MGI_C57BL6J_4439554	Gm16630	NCBI_Gene:100503622,ENSEMBL:ENSMUSG00000097434	MGI:4439554	lncRNA gene	predicted gene, 16630
6	gene	48.13047	48.14608	positive	MGI_C57BL6J_5589594	Gm30435	NCBI_Gene:102632336	MGI:5589594	lncRNA gene	predicted gene, 30435
6	gene	48.13394	48.13401	positive	MGI_C57BL6J_4413804	n-TCgca37	NCBI_Gene:102467630	MGI:4413804	tRNA gene	nuclear encoded tRNA cysteine 37 (anticodon GCA)
6	gene	48.13951	48.13958	negative	MGI_C57BL6J_4413777	n-TCgca10	NCBI_Gene:102467491	MGI:4413777	tRNA gene	nuclear encoded tRNA cysteine 10 (anticodon GCA)
6	gene	48.14048	48.14055	negative	MGI_C57BL6J_4413771	n-TCgca4	NCBI_Gene:102467488	MGI:4413771	tRNA gene	nuclear encoded tRNA cysteine 4 (anticodon GCA)
6	gene	48.14336	48.14343	positive	MGI_C57BL6J_4413780	n-TCgca13	NCBI_Gene:102467492	MGI:4413780	tRNA gene	nuclear encoded tRNA cysteine 13 (anticodon GCA)
6	gene	48.14493	48.14500	negative	MGI_C57BL6J_4413803	n-TCgca36	NCBI_Gene:102467282	MGI:4413803	tRNA gene	nuclear encoded tRNA cysteine 36 (anticodon GCA)
6	gene	48.15471	48.15478	positive	MGI_C57BL6J_4413805	n-TCgca38	NCBI_Gene:102467502	MGI:4413805	tRNA gene	nuclear encoded tRNA cysteine 38 (anticodon GCA)
6	gene	48.15628	48.15635	negative	MGI_C57BL6J_4413802	n-TCgca35	NCBI_Gene:102467501	MGI:4413802	tRNA gene	nuclear encoded tRNA cysteine 35 (anticodon GCA)
6	gene	48.16018	48.16025	positive	MGI_C57BL6J_4413806	n-TCgca39	NCBI_Gene:102467642	MGI:4413806	tRNA gene	nuclear encoded tRNA cysteine 39 (anticodon GCA)
6	gene	48.16410	48.16417	positive	MGI_C57BL6J_4413807	n-TCgca40	NCBI_Gene:109705	MGI:4413807	tRNA gene	nuclear encoded tRNA cysteine 40 (anticodon GCA)
6	gene	48.18632	48.18639	positive	MGI_C57BL6J_4413775	n-TCgca8	NCBI_Gene:102467490	MGI:4413775	tRNA gene	nuclear encoded tRNA cysteine 8 (anticodon GCA)
6	gene	48.19703	48.19710	positive	MGI_C57BL6J_4413808	n-TCgca41	NCBI_Gene:102467283	MGI:4413808	tRNA gene	nuclear encoded tRNA cysteine 41 (anticodon GCA)
6	gene	48.20507	48.20514	positive	MGI_C57BL6J_4413768	n-TCgca1	NCBI_Gene:102467487	MGI:4413768	tRNA gene	nuclear encoded tRNA cysteine 1 (anticodon GCA)
6	gene	48.20745	48.20752	negative	MGI_C57BL6J_4413801	n-TCgca34	NCBI_Gene:102467281	MGI:4413801	tRNA gene	nuclear encoded tRNA cysteine 34 (anticodon GCA)
6	gene	48.20984	48.20991	negative	MGI_C57BL6J_4413816	n-TCgca49	NCBI_Gene:102467286	MGI:4413816	tRNA gene	nuclear encoded tRNA cysteine 49 (anticodon GCA)
6	gene	48.22218	48.24739	positive	MGI_C57BL6J_5621687	Gm38802	NCBI_Gene:105242646	MGI:5621687	lncRNA gene	predicted gene, 38802
6	gene	48.22309	48.22317	negative	MGI_C57BL6J_4413800	n-TCgca33	NCBI_Gene:102467500	MGI:4413800	tRNA gene	nuclear encoded tRNA cysteine 33 (anticodon GCA)
6	gene	48.22433	48.22440	negative	MGI_C57BL6J_4413815	n-TCgca48	NCBI_Gene:102467426	MGI:4413815	tRNA gene	nuclear encoded tRNA cysteine 48 (anticodon GCA)
6	gene	48.24432	48.24439	negative	MGI_C57BL6J_4413799	n-TCgca32	NCBI_Gene:102467280	MGI:4413799	tRNA gene	nuclear encoded tRNA cysteine 32 (anticodon GCA)
6	gene	48.25210	48.25217	negative	MGI_C57BL6J_4413798	n-TCgca31	NCBI_Gene:102467499	MGI:4413798	tRNA gene	nuclear encoded tRNA cysteine 31 (anticodon GCA)
6	gene	48.25308	48.25315	negative	MGI_C57BL6J_4413782	n-TCgca15	NCBI_Gene:102467412	MGI:4413782	tRNA gene	nuclear encoded tRNA cysteine 15 (anticodon GCA)
6	gene	48.26172	48.26179	negative	MGI_C57BL6J_4413797	n-TCgca30	NCBI_Gene:102467425	MGI:4413797	tRNA gene	nuclear encoded tRNA cysteine 30 (anticodon GCA)
6	gene	48.26846	48.26853	negative	MGI_C57BL6J_4413796	n-TCgca29	NCBI_Gene:102467279	MGI:4413796	tRNA gene	nuclear encoded tRNA cysteine 29 (anticodon GCA)
6	gene	48.27193	48.27200	positive	MGI_C57BL6J_4413809	n-TCgca42	NCBI_Gene:102467503	MGI:4413809	tRNA gene	nuclear encoded tRNA cysteine 42 (anticodon GCA)
6	gene	48.27368	48.27375	positive	MGI_C57BL6J_4413810	n-TCgca43	NCBI_Gene:102467504	MGI:4413810	tRNA gene	nuclear encoded tRNA cysteine 43 (anticodon GCA)
6	gene	48.27524	48.33816	positive	MGI_C57BL6J_5589521	Gm30362	NCBI_Gene:102632227	MGI:5589521	lncRNA gene	predicted gene, 30362
6	gene	48.27879	48.27886	negative	MGI_C57BL6J_4413770	n-TCgca3	NCBI_Gene:102467640	MGI:4413770	tRNA gene	nuclear encoded tRNA cysteine 3 (anticodon GCA)
6	gene	48.27977	48.27984	negative	MGI_C57BL6J_4413795	n-TCgca28	NCBI_Gene:102467498	MGI:4413795	tRNA gene	nuclear encoded tRNA cysteine 28 (anticodon GCA)
6	gene	48.28888	48.28895	negative	MGI_C57BL6J_4413779	n-TCgca12	NCBI_Gene:102467424	MGI:4413779	tRNA gene	nuclear encoded tRNA cysteine 12 (anticodon GCA)
6	gene	48.28923	48.28943	positive	MGI_C57BL6J_5451899	Gm22122	ENSEMBL:ENSMUSG00000092888	MGI:5451899	snRNA gene	predicted gene, 22122
6	gene	48.29301	48.29308	negative	MGI_C57BL6J_4413817	n-TCgca50	NCBI_Gene:102467287	MGI:4413817	tRNA gene	nuclear encoded tRNA cysteine 50 (anticodon GCA)
6	gene	48.29743	48.29750	positive	MGI_C57BL6J_4413811	n-Tcgca44	NCBI_Gene:102467284	MGI:4413811	tRNA gene	nuclear encoded tRNA cysteine 44 (anticodon GCA)
6	gene	48.29895	48.29902	negative	MGI_C57BL6J_4413794	n-TCgca27	NCBI_Gene:102467278	MGI:4413794	tRNA gene	nuclear encoded tRNA cysteine 27 (anticodon GCA)
6	gene	48.30246	48.30253	positive	MGI_C57BL6J_4413773	n-TCgca6	NCBI_Gene:102467489	MGI:4413773	tRNA gene	nuclear encoded tRNA cysteine 6 (anticodon GCA)
6	gene	48.30347	48.30354	positive	MGI_C57BL6J_4413784	n-TCgca17	NCBI_Gene:102467273	MGI:4413784	tRNA gene	nuclear encoded tRNA cysteine 17 (anticodon GCA)
6	gene	48.30546	48.30553	negative	MGI_C57BL6J_4413774	n-TCgca7	NCBI_Gene:102467269	MGI:4413774	tRNA gene	nuclear encoded tRNA cysteine 7 (anticodon GCA)
6	gene	48.30873	48.30880	negative	MGI_C57BL6J_4413783	n-TCgca16	NCBI_Gene:102467493	MGI:4413783	tRNA gene	nuclear encoded tRNA cysteine 16 (anticodon GCA)
6	gene	48.30971	48.30978	negative	MGI_C57BL6J_4413793	n-TCgca26	NCBI_Gene:102467497	MGI:4413793	tRNA gene	nuclear encoded tRNA cysteine 26 (anticodon GCA)
6	gene	48.31150	48.31157	positive	MGI_C57BL6J_4413776	n-TCgca9	NCBI_Gene:102467270	MGI:4413776	tRNA gene	nuclear encoded tRNA cysteine 9 (anticodon GCA)
6	gene	48.31302	48.31309	negative	MGI_C57BL6J_4413792	n-TCgca25	NCBI_Gene:102467277	MGI:4413792	tRNA gene	nuclear encoded tRNA cysteine 25 (anticodon GCA)
6	gene	48.31654	48.31661	positive	MGI_C57BL6J_4413769	n-TCgca2	NCBI_Gene:102467267	MGI:4413769	tRNA gene	nuclear encoded tRNA cysteine 2 (anticodon GCA)
6	gene	48.31752	48.31759	positive	MGI_C57BL6J_4413812	n-TCgca45	NCBI_Gene:102467505	MGI:4413812	tRNA gene	nuclear encoded tRNA cysteine 45 (anticodon GCA)
6	gene	48.33284	48.33291	negative	MGI_C57BL6J_4413791	n-TCgca24	NCBI_Gene:102467276	MGI:4413791	tRNA gene	nuclear encoded tRNA cysteine 24 (anticodon GCA)
6	gene	48.33611	48.33618	negative	MGI_C57BL6J_4413790	n-TCgca23	NCBI_Gene:102467496	MGI:4413790	tRNA gene	nuclear encoded tRNA cysteine 23 (anticodon GCA)
6	gene	48.33709	48.33716	negative	MGI_C57BL6J_4413789	n-TCgca22	NCBI_Gene:102467275	MGI:4413789	tRNA gene	nuclear encoded tRNA cysteine 22 (anticodon GCA)
6	gene	48.34061	48.34068	positive	MGI_C57BL6J_4413781	n-TCgca14	NCBI_Gene:102467272	MGI:4413781	tRNA gene	nuclear encoded tRNA cysteine 14 (anticodon GCA)
6	gene	48.34159	48.34166	positive	MGI_C57BL6J_4413772	n-TCgca5	NCBI_Gene:102467268	MGI:4413772	tRNA gene	nuclear encoded tRNA cysteine 5 (anticodon GCA)
6	gene	48.34976	48.34983	negative	MGI_C57BL6J_4413788	n-TCgca21	NCBI_Gene:102467641	MGI:4413788	tRNA gene	nuclear encoded tRNA cysteine 21 (anticodon GCA)
6	gene	48.35402	48.35409	negative	MGI_C57BL6J_4413787	n-TCgca20	NCBI_Gene:102467495	MGI:4413787	tRNA gene	nuclear encoded tRNA cysteine 20 (anticodon GCA)
6	gene	48.35585	48.35593	positive	MGI_C57BL6J_4413813	n-TCgca46	NCBI_Gene:102467285	MGI:4413813	tRNA gene	nuclear encoded tRNA cysteine 46 (anticodon GCA)
6	gene	48.35685	48.35692	positive	MGI_C57BL6J_4413778	n-TCgca11	NCBI_Gene:102467271	MGI:4413778	tRNA gene	nuclear encoded tRNA cysteine 11 (anticodon GCA)
6	gene	48.36353	48.36360	negative	MGI_C57BL6J_4413786	n-TCgca19	NCBI_Gene:102467274	MGI:4413786	tRNA gene	nuclear encoded tRNA cysteine 19 (anticodon GCA)
6	gene	48.37414	48.39541	negative	MGI_C57BL6J_5753272	Gm44696	ENSEMBL:ENSMUSG00000107875	MGI:5753272	lncRNA gene	predicted gene 44696
6	pseudogene	48.38116	48.38207	negative	MGI_C57BL6J_3645672	Gm7880	NCBI_Gene:665990,ENSEMBL:ENSMUSG00000108275	MGI:3645672	pseudogene	predicted gene 7880
6	gene	48.39559	48.41985	positive	MGI_C57BL6J_1925077	Krba1	NCBI_Gene:77827,ENSEMBL:ENSMUSG00000042810	MGI:1925077	protein coding gene	KRAB-A domain containing 1
6	gene	48.39618	48.39672	negative	MGI_C57BL6J_1922119	4930447G04Rik	NA	NA	unclassified gene	RIKEN cDNA 4930447G04 gene
6	gene	48.42077	48.42084	positive	MGI_C57BL6J_5454102	Gm24325	ENSEMBL:ENSMUSG00000093085	MGI:5454102	miRNA gene	predicted gene, 24325
6	gene	48.42236	48.42756	positive	MGI_C57BL6J_5621688	Gm38803	NCBI_Gene:105242647	MGI:5621688	lncRNA gene	predicted gene, 38803
6	gene	48.42769	48.44603	negative	MGI_C57BL6J_1916160	Zfp467	NCBI_Gene:68910,ENSEMBL:ENSMUSG00000068551	MGI:1916160	protein coding gene	zinc finger protein 467
6	gene	48.44623	48.50126	positive	MGI_C57BL6J_2674311	Sspo	NCBI_Gene:243369,ENSEMBL:ENSMUSG00000029797	MGI:2674311	protein coding gene	SCO-spondin
6	pseudogene	48.50434	48.53483	positive	MGI_C57BL6J_1889827	Zfp862-ps	NCBI_Gene:58894,ENSEMBL:ENSMUSG00000107476	MGI:1889827	pseudogene	zinc finger protein 862, pseudogene
6	pseudogene	48.52346	48.52388	positive	MGI_C57BL6J_3704266	Gm10243	NCBI_Gene:100302576,ENSEMBL:ENSMUSG00000095526	MGI:3704266	pseudogene	predicted gene 10243
6	pseudogene	48.52392	48.52513	negative	MGI_C57BL6J_3648251	Gm7887	NCBI_Gene:666005,ENSEMBL:ENSMUSG00000044211	MGI:3648251	pseudogene	predicted gene 7887
6	gene	48.53658	48.53747	negative	MGI_C57BL6J_1916682	1700026J14Rik	NCBI_Gene:69432,ENSEMBL:ENSMUSG00000097716	MGI:1916682	lncRNA gene	RIKEN cDNA 1700026J14 gene
6	gene	48.53757	48.54180	positive	MGI_C57BL6J_1923502	Atp6v0e2	NCBI_Gene:76252,ENSEMBL:ENSMUSG00000039347	MGI:1923502	protein coding gene	ATPase, H+ transporting, lysosomal V0 subunit E2
6	gene	48.55478	48.57072	positive	MGI_C57BL6J_2652848	Lrrc61	NCBI_Gene:243371,ENSEMBL:ENSMUSG00000073096	MGI:2652848	protein coding gene	leucine rich repeat containing 61
6	gene	48.56970	48.57285	negative	MGI_C57BL6J_1918910	Rarres2	NCBI_Gene:71660,ENSEMBL:ENSMUSG00000009281	MGI:1918910	protein coding gene	retinoic acid receptor responder (tazarotene induced) 2
6	gene	48.58944	48.59058	positive	MGI_C57BL6J_3645688	Gm5111	NCBI_Gene:330305,ENSEMBL:ENSMUSG00000052730	MGI:3645688	protein coding gene	predicted gene 5111
6	gene	48.58961	48.61325	positive	MGI_C57BL6J_5753597	Gm45021	ENSEMBL:ENSMUSG00000107588	MGI:5753597	protein coding gene	predicted gene 45021
6	gene	48.59388	48.59908	positive	MGI_C57BL6J_1889817	Repin1	NCBI_Gene:58887,ENSEMBL:ENSMUSG00000052751	MGI:1889817	protein coding gene	replication initiator 1
6	gene	48.59394	48.61928	positive	MGI_C57BL6J_5753541	Gm44965	ENSEMBL:ENSMUSG00000107789	MGI:5753541	protein coding gene	predicted gene 44965
6	gene	48.60200	48.62323	positive	MGI_C57BL6J_2683557	Zfp775	NCBI_Gene:243372,ENSEMBL:ENSMUSG00000007216	MGI:2683557	protein coding gene	zinc finger protein 775
6	gene	48.61127	48.62236	negative	MGI_C57BL6J_5621689	Gm38804	NCBI_Gene:105242648,ENSEMBL:ENSMUSG00000107640	MGI:5621689	lncRNA gene	predicted gene, 38804
6	gene	48.62676	48.63369	positive	MGI_C57BL6J_2141510	AI854703	NCBI_Gene:243373,ENSEMBL:ENSMUSG00000053297	MGI:2141510	protein coding gene	expressed sequence AI854703
6	gene	48.64719	48.66087	positive	MGI_C57BL6J_2685303	Gimap8	NCBI_Gene:243374,ENSEMBL:ENSMUSG00000064262	MGI:2685303	protein coding gene	GTPase, IMAP family member 8
6	pseudogene	48.66540	48.66586	negative	MGI_C57BL6J_5690654	Gm44262	ENSEMBL:ENSMUSG00000108117	MGI:5690654	pseudogene	predicted gene, 44262
6	gene	48.67583	48.67694	negative	MGI_C57BL6J_5826595	Gm46958	NCBI_Gene:108169139	MGI:5826595	lncRNA gene	predicted gene, 46958
6	gene	48.67612	48.67912	positive	MGI_C57BL6J_3511744	Gimap9	NCBI_Gene:317758,ENSEMBL:ENSMUSG00000051124	MGI:3511744	protein coding gene	GTPase, IMAP family member 9
6	gene	48.68455	48.69206	positive	MGI_C57BL6J_1349656	Gimap4	NCBI_Gene:107526,ENSEMBL:ENSMUSG00000054435	MGI:1349656	protein coding gene	GTPase, IMAP family member 4
6	gene	48.70158	48.70824	negative	MGI_C57BL6J_1918876	Gimap6	NCBI_Gene:231931,ENSEMBL:ENSMUSG00000047867	MGI:1918876	protein coding gene	GTPase, IMAP family member 6
6	gene	48.71861	48.75264	positive	MGI_C57BL6J_5547789	Gm28053	ENSEMBL:ENSMUSG00000098715	MGI:5547789	protein coding gene	predicted gene, 28053
6	gene	48.71862	48.72464	positive	MGI_C57BL6J_1349657	Gimap7	NCBI_Gene:231932,ENSEMBL:ENSMUSG00000043931	MGI:1349657	protein coding gene	GTPase, IMAP family member 7
6	gene	48.72928	48.74144	negative	MGI_C57BL6J_3781523	Gimap1os	NCBI_Gene:100041450,ENSEMBL:ENSMUSG00000044867	MGI:3781523	lncRNA gene	GTPase, IMAP family member 1, opposite strand
6	gene	48.72955	48.73367	positive	MGI_C57BL6J_1889832	A130009E19Rik	NA	NA	unclassified gene	RIKEN cDNA A130009E19 gene
6	gene	48.73905	48.74379	positive	MGI_C57BL6J_109368	Gimap1	NCBI_Gene:16205,ENSEMBL:ENSMUSG00000090019	MGI:109368	protein coding gene	GTPase, IMAP family member 1
6	gene	48.74614	48.75421	positive	MGI_C57BL6J_2442232	Gimap5	NCBI_Gene:317757,ENSEMBL:ENSMUSG00000043505	MGI:2442232	protein coding gene	GTPase, IMAP family member 5
6	gene	48.75423	48.75599	negative	MGI_C57BL6J_5690618	Gm44226	ENSEMBL:ENSMUSG00000108298	MGI:5690618	lncRNA gene	predicted gene, 44226
6	gene	48.75534	48.75637	positive	MGI_C57BL6J_1921153	4833403J16Rik	ENSEMBL:ENSMUSG00000107481	MGI:1921153	lncRNA gene	RIKEN cDNA 4833403J16 gene
6	gene	48.76446	48.77085	negative	MGI_C57BL6J_1932723	Gimap3	NCBI_Gene:83408,ENSEMBL:ENSMUSG00000039264	MGI:1932723	protein coding gene	GTPase, IMAP family member 3
6	gene	48.79100	48.79378	negative	MGI_C57BL6J_5589873	Gm30714	NCBI_Gene:102632718	MGI:5589873	lncRNA gene	predicted gene, 30714
6	gene	48.79809	48.79885	negative	MGI_C57BL6J_5589940	Gm30781	NCBI_Gene:102632803,ENSEMBL:ENSMUSG00000108130	MGI:5589940	lncRNA gene	predicted gene, 30781
6	pseudogene	48.81902	48.82047	positive	MGI_C57BL6J_5010019	Gm17834	NCBI_Gene:100415951,ENSEMBL:ENSMUSG00000107574	MGI:5010019	pseudogene	predicted gene, 17834
6	gene	48.83381	48.84595	negative	MGI_C57BL6J_1916348	Tmem176b	NCBI_Gene:65963,ENSEMBL:ENSMUSG00000029810	MGI:1916348	protein coding gene	transmembrane protein 176B
6	gene	48.84092	48.84707	positive	MGI_C57BL6J_1913308	Tmem176a	NCBI_Gene:66058,ENSEMBL:ENSMUSG00000023367	MGI:1913308	protein coding gene	transmembrane protein 176A
6	gene	48.84766	48.90306	negative	MGI_C57BL6J_5753340	Gm44764	NCBI_Gene:108169140,ENSEMBL:ENSMUSG00000107597	MGI:5753340	lncRNA gene	predicted gene 44764
6	gene	48.85990	48.86608	positive	MGI_C57BL6J_3643446	Gm7932	NCBI_Gene:666105,ENSEMBL:ENSMUSG00000108084	MGI:3643446	lncRNA gene	predicted gene 7932
6	gene	48.87290	48.90919	positive	MGI_C57BL6J_1923757	Aoc1	NCBI_Gene:76507,ENSEMBL:ENSMUSG00000029811	MGI:1923757	protein coding gene	amine oxidase, copper-containing 1
6	gene	48.92990	48.93369	positive	MGI_C57BL6J_1917011	Doxl1	NCBI_Gene:69761,ENSEMBL:ENSMUSG00000029813	MGI:1917011	protein coding gene	diamine oxidase-like protein 1
6	gene	48.93479	48.93492	positive	MGI_C57BL6J_5454125	Gm24348	ENSEMBL:ENSMUSG00000089335	MGI:5454125	snoRNA gene	predicted gene, 24348
6	pseudogene	48.93975	48.94405	negative	MGI_C57BL6J_3642310	Gm10242	NCBI_Gene:100040589,ENSEMBL:ENSMUSG00000068537	MGI:3642310	pseudogene	predicted gene 10242
6	pseudogene	48.95626	48.95690	positive	MGI_C57BL6J_5010723	Gm18538	NCBI_Gene:100417335,ENSEMBL:ENSMUSG00000107943	MGI:5010723	pseudogene	predicted gene, 18538
6	pseudogene	48.96279	48.96417	positive	MGI_C57BL6J_5011357	Gm19172	NCBI_Gene:100418382,ENSEMBL:ENSMUSG00000107692	MGI:5011357	pseudogene	predicted gene, 19172
6	gene	48.97481	48.97875	positive	MGI_C57BL6J_3618290	Doxl2	NCBI_Gene:243376,ENSEMBL:ENSMUSG00000068536	MGI:3618290	protein coding gene	diamine oxidase-like protein 2
6	pseudogene	48.98110	48.98221	positive	MGI_C57BL6J_5010724	Gm18539	NCBI_Gene:100417336,ENSEMBL:ENSMUSG00000108017	MGI:5010724	pseudogene	predicted gene, 18539
6	gene	48.98662	48.99962	negative	MGI_C57BL6J_1922597	4930563H07Rik	NCBI_Gene:75347,ENSEMBL:ENSMUSG00000107656	MGI:1922597	lncRNA gene	RIKEN cDNA 4930563H07 gene
6	gene	48.98686	48.99173	positive	MGI_C57BL6J_2682321	Svs1	NCBI_Gene:243377,ENSEMBL:ENSMUSG00000039215	MGI:2682321	protein coding gene	seminal vesicle secretory protein 1
6	pseudogene	48.99521	48.99765	positive	MGI_C57BL6J_5011358	Gm19173	NCBI_Gene:100418383,ENSEMBL:ENSMUSG00000107457	MGI:5011358	pseudogene	predicted gene, 19173
6	gene	49.03652	49.07093	positive	MGI_C57BL6J_1934765	Gpnmb	NCBI_Gene:93695,ENSEMBL:ENSMUSG00000029816	MGI:1934765	protein coding gene	glycoprotein (transmembrane) nmb
6	pseudogene	49.07162	49.07216	positive	MGI_C57BL6J_5011438	Gm19253	NCBI_Gene:100462958,ENSEMBL:ENSMUSG00000107758	MGI:5011438	pseudogene	predicted gene, 19253
6	gene	49.07379	49.13914	positive	MGI_C57BL6J_1922843	Malsu1	NCBI_Gene:75593,ENSEMBL:ENSMUSG00000029815	MGI:1922843	protein coding gene	mitochondrial assembly of ribosomal large subunit 1
6	pseudogene	49.07995	49.08117	negative	MGI_C57BL6J_3645227	Gm7890	NCBI_Gene:666011,ENSEMBL:ENSMUSG00000107990	MGI:3645227	pseudogene	predicted gene 7890
6	gene	49.08522	49.21501	negative	MGI_C57BL6J_1890359	Igf2bp3	NCBI_Gene:140488,ENSEMBL:ENSMUSG00000029814	MGI:1890359	protein coding gene	insulin-like growth factor 2 mRNA binding protein 3
6	pseudogene	49.17267	49.17352	positive	MGI_C57BL6J_5010195	Gm18010	NCBI_Gene:100416268,ENSEMBL:ENSMUSG00000107727	MGI:5010195	pseudogene	predicted gene, 18010
6	gene	49.20581	49.21248	negative	MGI_C57BL6J_2442568	D030074P21Rik	NCBI_Gene:102642435	MGI:2442568	lncRNA gene	RIKEN cDNA D030074P21 gene
6	gene	49.24392	49.26425	negative	MGI_C57BL6J_1933972	Tra2a	NCBI_Gene:101214,ENSEMBL:ENSMUSG00000029817	MGI:1933972	protein coding gene	transformer 2 alpha
6	gene	49.25485	49.25646	negative	MGI_C57BL6J_2441851	B230214O09Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA B230214O09 gene
6	gene	49.25485	49.25646	positive	MGI_C57BL6J_5690372	Gm43980	ENSEMBL:ENSMUSG00000107962	MGI:5690372	unclassified gene	predicted gene, 43980
6	pseudogene	49.28655	49.28729	positive	MGI_C57BL6J_5010196	Gm18011	NCBI_Gene:100416269,ENSEMBL:ENSMUSG00000107916	MGI:5010196	pseudogene	predicted gene, 18011
6	gene	49.31927	49.34159	positive	MGI_C57BL6J_1889376	Ccdc126	NCBI_Gene:57895,ENSEMBL:ENSMUSG00000050786	MGI:1889376	protein coding gene	coiled-coil domain containing 126
6	gene	49.36722	49.39054	positive	MGI_C57BL6J_2442161	Fam221a	NCBI_Gene:231946,ENSEMBL:ENSMUSG00000047115	MGI:2442161	protein coding gene	family with sequence similarity 221, member A
6	gene	49.39548	49.46951	positive	MGI_C57BL6J_1924735	Stk31	NCBI_Gene:77485,ENSEMBL:ENSMUSG00000023403	MGI:1924735	protein coding gene	serine threonine kinase 31
6	pseudogene	49.42375	49.42497	negative	MGI_C57BL6J_4937887	Gm17060	NCBI_Gene:100416089,ENSEMBL:ENSMUSG00000090624	MGI:4937887	pseudogene	predicted gene 17060
6	pseudogene	49.54298	49.56317	negative	MGI_C57BL6J_3644734	Gm5305	NCBI_Gene:102633308,ENSEMBL:ENSMUSG00000108266	MGI:3644734	pseudogene	predicted gene 5305
6	pseudogene	49.59624	49.59976	positive	MGI_C57BL6J_3645840	Rpl19-ps8	NCBI_Gene:666210	MGI:3645840	pseudogene	ribosomal protein L19, pseudogene 8
6	gene	49.63363	49.67845	positive	MGI_C57BL6J_5590385	Gm31226	NCBI_Gene:102633391	MGI:5590385	lncRNA gene	predicted gene, 31226
6	pseudogene	49.72725	49.72752	negative	MGI_C57BL6J_5690611	Gm44219	ENSEMBL:ENSMUSG00000107982	MGI:5690611	pseudogene	predicted gene, 44219
6	gene	49.82271	49.82951	positive	MGI_C57BL6J_97374	Npy	NCBI_Gene:109648,ENSEMBL:ENSMUSG00000029819	MGI:97374	protein coding gene	neuropeptide Y
6	pseudogene	49.85800	49.85885	negative	MGI_C57BL6J_5010192	Gm18007	NCBI_Gene:100416264,ENSEMBL:ENSMUSG00000107664	MGI:5010192	pseudogene	predicted gene, 18007
6	gene	50.05119	50.10763	positive	MGI_C57BL6J_3781631	Gm3455	ENSEMBL:ENSMUSG00000108071	MGI:3781631	lncRNA gene	predicted gene 3455
6	gene	50.10766	50.11016	negative	MGI_C57BL6J_5621690	Gm38805	NCBI_Gene:105242649	MGI:5621690	lncRNA gene	predicted gene, 38805
6	gene	50.11024	50.19894	positive	MGI_C57BL6J_1927340	Mpp6	NCBI_Gene:56524,ENSEMBL:ENSMUSG00000038388	MGI:1927340	protein coding gene	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
6	gene	50.18889	50.26386	negative	MGI_C57BL6J_1889850	Gsdme	NCBI_Gene:54722,ENSEMBL:ENSMUSG00000029821	MGI:1889850	protein coding gene	gasdermin E
6	gene	50.29333	50.45635	negative	MGI_C57BL6J_1918970	Osbpl3	NCBI_Gene:71720,ENSEMBL:ENSMUSG00000029822	MGI:1918970	protein coding gene	oxysterol binding protein-like 3
6	gene	50.49955	50.50572	negative	MGI_C57BL6J_5623257	Gm40372	NCBI_Gene:105244836	MGI:5623257	lncRNA gene	predicted gene, 40372
6	gene	50.50156	50.53802	positive	MGI_C57BL6J_5590438	Gm31279	NCBI_Gene:102633461	MGI:5590438	lncRNA gene	predicted gene, 31279
6	gene	50.53990	50.54003	negative	MGI_C57BL6J_5456066	Gm26289	ENSEMBL:ENSMUSG00000077357	MGI:5456066	snoRNA gene	predicted gene, 26289
6	gene	50.54076	50.54298	positive	MGI_C57BL6J_5621691	Gm38806	NCBI_Gene:105242651	MGI:5621691	lncRNA gene	predicted gene, 38806
6	gene	50.56256	50.56654	negative	MGI_C57BL6J_88578	Cycs	NCBI_Gene:13063,ENSEMBL:ENSMUSG00000063694	MGI:88578	protein coding gene	cytochrome c, somatic
6	gene	50.56664	50.59486	positive	MGI_C57BL6J_1918631	5430402O13Rik	NCBI_Gene:73183,ENSEMBL:ENSMUSG00000085776	MGI:1918631	lncRNA gene	RIKEN cDNA 5430402O13 gene
6	gene	50.57240	50.57251	positive	MGI_C57BL6J_5530758	Mir6371	miRBase:MI0021900,NCBI_Gene:102465193,ENSEMBL:ENSMUSG00000099221	MGI:5530758	miRNA gene	microRNA 6371
6	gene	50.57330	50.59691	negative	MGI_C57BL6J_1918071	4921507P07Rik	NCBI_Gene:70821,ENSEMBL:ENSMUSG00000029828	MGI:1918071	protein coding gene	RIKEN cDNA 4921507P07 gene
6	pseudogene	50.59987	50.60024	positive	MGI_C57BL6J_5690446	Gm44054	ENSEMBL:ENSMUSG00000107447	MGI:5690446	pseudogene	predicted gene, 44054
6	gene	50.60154	50.60528	negative	MGI_C57BL6J_5621692	Gm38807	NCBI_Gene:105242652	MGI:5621692	lncRNA gene	predicted gene, 38807
6	pseudogene	50.60864	50.61069	positive	MGI_C57BL6J_3646036	Gm4782	NCBI_Gene:213320,ENSEMBL:ENSMUSG00000107418	MGI:3646036	pseudogene	predicted gene 4782
6	pseudogene	50.61785	50.61854	negative	MGI_C57BL6J_3644146	Gm8035	NCBI_Gene:666302,ENSEMBL:ENSMUSG00000108135	MGI:3644146	pseudogene	predicted gene 8035
6	pseudogene	50.61984	50.62188	negative	MGI_C57BL6J_3644148	Gm8038	NCBI_Gene:666308,ENSEMBL:ENSMUSG00000107821	MGI:3644148	pseudogene	predicted gene 8038
6	pseudogene	50.62574	50.62646	negative	MGI_C57BL6J_3647078	Gm8039	NCBI_Gene:666310,ENSEMBL:ENSMUSG00000108016	MGI:3647078	pseudogene	predicted gene 8039
6	pseudogene	50.62768	50.62834	negative	MGI_C57BL6J_5010950	Gm18765	NCBI_Gene:100417688,ENSEMBL:ENSMUSG00000107740	MGI:5010950	pseudogene	predicted gene, 18765
6	gene	50.65067	50.65444	negative	MGI_C57BL6J_1926488	Npvf	NCBI_Gene:60531,ENSEMBL:ENSMUSG00000029831	MGI:1926488	protein coding gene	neuropeptide VF precursor
6	gene	50.65985	50.67948	negative	MGI_C57BL6J_5621693	Gm38808	NCBI_Gene:105242653	MGI:5621693	lncRNA gene	predicted gene, 38808
6	pseudogene	50.74668	50.74781	negative	MGI_C57BL6J_3781195	Gm3017	NCBI_Gene:100040877,ENSEMBL:ENSMUSG00000107672	MGI:3781195	pseudogene	predicted gene 3017
6	gene	50.77611	50.81503	positive	MGI_C57BL6J_2443109	C530044C16Rik	NCBI_Gene:319981,ENSEMBL:ENSMUSG00000107667	MGI:2443109	lncRNA gene	RIKEN cDNA C530044C16 gene
6	gene	50.79907	50.80303	negative	MGI_C57BL6J_5690501	Gm44109	ENSEMBL:ENSMUSG00000107978	MGI:5690501	lncRNA gene	predicted gene, 44109
6	gene	50.80427	50.82229	negative	MGI_C57BL6J_5590614	Gm31455	NCBI_Gene:102633693	MGI:5590614	lncRNA gene	predicted gene, 31455
6	gene	50.84671	50.87808	negative	MGI_C57BL6J_3588242	G930045G22Rik	ENSEMBL:ENSMUSG00000107993	MGI:3588242	lncRNA gene	RIKEN cDNA G930045G22 gene
6	gene	50.88089	50.88262	negative	MGI_C57BL6J_5825559	Gm45922	NCBI_Gene:105247310	MGI:5825559	lncRNA gene	predicted gene, 45922
6	gene	50.90046	50.90898	negative	MGI_C57BL6J_5590790	Gm31631	NCBI_Gene:102633926	MGI:5590790	lncRNA gene	predicted gene, 31631
6	gene	50.90640	50.91074	positive	MGI_C57BL6J_5590738	Gm31579	NCBI_Gene:102633851,ENSEMBL:ENSMUSG00000107488	MGI:5590738	lncRNA gene	predicted gene, 31579
6	gene	50.93500	50.94438	negative	MGI_C57BL6J_5590845	Gm31686	NCBI_Gene:102633996	MGI:5590845	lncRNA gene	predicted gene, 31686
6	pseudogene	50.96727	50.96751	positive	MGI_C57BL6J_5690794	Gm44402	ENSEMBL:ENSMUSG00000108153	MGI:5690794	pseudogene	predicted gene, 44402
6	gene	50.97338	50.99037	negative	MGI_C57BL6J_5621694	Gm38809	NCBI_Gene:105242654	MGI:5621694	lncRNA gene	predicted gene, 38809
6	gene	50.98740	51.06801	positive	MGI_C57BL6J_5826596	Gm46959	NCBI_Gene:108169141	MGI:5826596	lncRNA gene	predicted gene, 46959
6	gene	51.03294	51.06126	negative	MGI_C57BL6J_5590905	Gm31746	NCBI_Gene:102634074	MGI:5590905	lncRNA gene	predicted gene, 31746
6	gene	51.09651	51.10067	negative	MGI_C57BL6J_5591349	Gm32190	NCBI_Gene:102634656	MGI:5591349	lncRNA gene	predicted gene, 32190
6	gene	51.12475	51.16645	negative	MGI_C57BL6J_5591487	Gm32328	NCBI_Gene:102634838	MGI:5591487	lncRNA gene	predicted gene, 32328
6	gene	51.14201	51.14608	positive	MGI_C57BL6J_5591405	Gm32246	NCBI_Gene:102634734	MGI:5591405	lncRNA gene	predicted gene, 32246
6	gene	51.15428	51.15493	positive	MGI_C57BL6J_5621695	Gm38810	NCBI_Gene:105242655	MGI:5621695	lncRNA gene	predicted gene, 38810
6	gene	51.20092	51.20735	negative	MGI_C57BL6J_5591562	Gm32403	NCBI_Gene:102634943	MGI:5591562	lncRNA gene	predicted gene, 32403
6	gene	51.22296	51.28057	negative	MGI_C57BL6J_5621706	Gm38821	NCBI_Gene:105242668	MGI:5621706	protein coding gene	predicted gene, 38821
6	gene	51.26981	51.26991	negative	MGI_C57BL6J_2676833	Mir148a	miRBase:MI0000550,NCBI_Gene:387166,ENSEMBL:ENSMUSG00000065505	MGI:2676833	miRNA gene	microRNA 148a
6	gene	51.28353	51.30864	negative	MGI_C57BL6J_5591638	Gm32479	NCBI_Gene:102635043,ENSEMBL:ENSMUSG00000107619	MGI:5591638	lncRNA gene	predicted gene, 32479
6	gene	51.33049	51.33371	positive	MGI_C57BL6J_2679266	BC022713	NA	NA	unclassified gene	cDNA sequence BC022713
6	gene	51.37971	51.39278	negative	MGI_C57BL6J_5477171	Gm26677	ENSEMBL:ENSMUSG00000097598	MGI:5477171	lncRNA gene	predicted gene, 26677
6	gene	51.37971	51.39279	positive	MGI_C57BL6J_3643041	Gm6559	NCBI_Gene:625167,ENSEMBL:ENSMUSG00000107660	MGI:3643041	lncRNA gene	predicted gene 6559
6	gene	51.40097	51.40222	negative	MGI_C57BL6J_1921343	0610033M10Rik	ENSEMBL:ENSMUSG00000108236	MGI:1921343	lncRNA gene	RIKEN cDNA 0610033M10 gene
6	gene	51.43267	51.45877	positive	MGI_C57BL6J_1339958	Nfe2l3	NCBI_Gene:18025,ENSEMBL:ENSMUSG00000029832	MGI:1339958	protein coding gene	nuclear factor, erythroid derived 2, like 3
6	gene	51.46043	51.47031	negative	MGI_C57BL6J_104819	Hnrnpa2b1	NCBI_Gene:53379,ENSEMBL:ENSMUSG00000004980	MGI:104819	protein coding gene	heterogeneous nuclear ribonucleoprotein A2/B1
6	gene	51.47036	51.48370	positive	MGI_C57BL6J_108515	Cbx3	NCBI_Gene:12417,ENSEMBL:ENSMUSG00000029836	MGI:108515	protein coding gene	chromobox 3
6	gene	51.52390	51.59068	positive	MGI_C57BL6J_1919232	Snx10	NCBI_Gene:71982,ENSEMBL:ENSMUSG00000038301	MGI:1919232	protein coding gene	sorting nexin 10
6	gene	51.62163	51.62171	positive	MGI_C57BL6J_5452691	Gm22914	ENSEMBL:ENSMUSG00000094528	MGI:5452691	miRNA gene	predicted gene, 22914
6	gene	51.69431	51.71108	negative	MGI_C57BL6J_5621696	Gm38811	NCBI_Gene:105242656,ENSEMBL:ENSMUSG00000108145	MGI:5621696	lncRNA gene	predicted gene, 38811
6	gene	51.85742	52.01255	negative	MGI_C57BL6J_1889206	Skap2	NCBI_Gene:54353,ENSEMBL:ENSMUSG00000059182	MGI:1889206	protein coding gene	src family associated phosphoprotein 2
6	gene	52.01260	52.02699	positive	MGI_C57BL6J_5690469	Gm44077	ENSEMBL:ENSMUSG00000108244	MGI:5690469	lncRNA gene	predicted gene, 44077
6	gene	52.10295	52.11368	positive	MGI_C57BL6J_3705267	Halr1	NCBI_Gene:102635415,ENSEMBL:ENSMUSG00000085412	MGI:3705267	lncRNA gene	Hoxa adjacent long noncoding RNA 1
6	gene	52.10480	52.10616	positive	MGI_C57BL6J_5636487	Halr1os1	NA	NA	unclassified non-coding RNA gene	Hoxa adjacent long noncoding RNA 1%2c opposite strand 1
6	pseudogene	52.11822	52.11894	positive	MGI_C57BL6J_3646130	Rps8-ps3	NCBI_Gene:666391,ENSEMBL:ENSMUSG00000081979	MGI:3646130	pseudogene	ribosomal protein S8, pseudogene 3
6	pseudogene	52.13178	52.13205	negative	MGI_C57BL6J_3705565	Rps19-ps14	ENSEMBL:ENSMUSG00000082781	MGI:3705565	pseudogene	ribosomal protein S19, pseudogene 14
6	gene	52.15537	52.15929	negative	MGI_C57BL6J_96170	Hoxa1	NCBI_Gene:15394,ENSEMBL:ENSMUSG00000029844	MGI:96170	protein coding gene	homeobox A1
6	gene	52.15690	52.15853	positive	MGI_C57BL6J_5636492	Hotairm2	NA	NA	unclassified non-coding RNA gene	Hoxa transcript antisense RNA%2c myeloid-specific 2
6	gene	52.15690	52.16212	positive	MGI_C57BL6J_3705155	Hotairm1	NCBI_Gene:105242658,ENSEMBL:ENSMUSG00000087658	MGI:3705155	antisense lncRNA gene	Hoxa transcript antisense RNA, myeloid-specific 1
6	gene	52.15843	52.15856	positive	MGI_C57BL6J_5531249	Gm27867	ENSEMBL:ENSMUSG00000098537	MGI:5531249	unclassified non-coding RNA gene	predicted gene, 27867
6	gene	52.16104	52.16125	positive	MGI_C57BL6J_5531243	Gm27861	ENSEMBL:ENSMUSG00000099068	MGI:5531243	unclassified non-coding RNA gene	predicted gene, 27861
6	gene	52.16201	52.16211	positive	MGI_C57BL6J_5531250	Gm27868	ENSEMBL:ENSMUSG00000098536	MGI:5531250	unclassified non-coding RNA gene	predicted gene, 27868
6	gene	52.16213	52.16227	positive	MGI_C57BL6J_5530859	Gm27477	ENSEMBL:ENSMUSG00000098749	MGI:5530859	unclassified non-coding RNA gene	predicted gene, 27477
6	gene	52.16242	52.16483	negative	MGI_C57BL6J_96174	Hoxa2	NCBI_Gene:15399,ENSEMBL:ENSMUSG00000014704	MGI:96174	protein coding gene	homeobox A2
6	gene	52.16336	52.21334	negative	MGI_C57BL6J_5579014	Gm28308	ENSEMBL:ENSMUSG00000101298	MGI:5579014	protein coding gene	predicted gene 28308
6	gene	52.16567	52.16956	positive	MGI_C57BL6J_1913890	Hoxaas2	NCBI_Gene:105242657,ENSEMBL:ENSMUSG00000056445	MGI:1913890	lncRNA gene	Hoxa cluster antisense RNA 2
6	gene	52.16611	52.16679	negative	MGI_C57BL6J_5826597	Gm46960	NCBI_Gene:108169142	MGI:5826597	lncRNA gene	predicted gene, 46960
6	gene	52.16906	52.21334	negative	MGI_C57BL6J_96175	Hoxa3	NCBI_Gene:15400,ENSEMBL:ENSMUSG00000079560	MGI:96175	protein coding gene	homeobox A3
6	gene	52.17285	52.17406	positive	MGI_C57BL6J_3705180	Gm15050	NCBI_Gene:100504154,ENSEMBL:ENSMUSG00000087626	MGI:3705180	lncRNA gene	predicted gene 15050
6	gene	52.17522	52.21508	positive	MGI_C57BL6J_1919878	Hoxaas3	NCBI_Gene:72628,ENSEMBL:ENSMUSG00000085696	MGI:1919878	antisense lncRNA gene	Hoxa cluster antisense RNA 3
6	gene	52.17694	52.18085	positive	MGI_C57BL6J_1924830	5730596B20Rik	NCBI_Gene:77580,ENSEMBL:ENSMUSG00000056468	MGI:1924830	lncRNA gene	RIKEN cDNA 5730596B20 gene
6	gene	52.18311	52.18993	positive	MGI_C57BL6J_5580136	Gm29430	ENSEMBL:ENSMUSG00000101451	MGI:5580136	lncRNA gene	predicted gene 29430
6	gene	52.18967	52.19175	negative	MGI_C57BL6J_96176	Hoxa4	NCBI_Gene:15401,ENSEMBL:ENSMUSG00000000942	MGI:96176	protein coding gene	homeobox A4
6	gene	52.20175	52.20459	negative	MGI_C57BL6J_96177	Hoxa5	NCBI_Gene:15402,ENSEMBL:ENSMUSG00000038253	MGI:96177	protein coding gene	homeobox A5
6	gene	52.20629	52.20872	negative	MGI_C57BL6J_96178	Hoxa6	NCBI_Gene:15403,ENSEMBL:ENSMUSG00000043219	MGI:96178	protein coding gene	homeobox A6
6	gene	52.21449	52.21529	negative	MGI_C57BL6J_5433747	Mira	NCBI_Gene:100736249	MGI:5433747	lncRNA gene	mistral long non-coding RNA
6	gene	52.21449	52.22185	negative	MGI_C57BL6J_96179	Hoxa7	NCBI_Gene:15404,ENSEMBL:ENSMUSG00000038236	MGI:96179	protein coding gene	homeobox A7
6	gene	52.22310	52.23109	negative	MGI_C57BL6J_96180	Hoxa9	NCBI_Gene:15405,ENSEMBL:ENSMUSG00000038227	MGI:96180	protein coding gene	homeobox A9
6	gene	52.23008	52.23016	negative	MGI_C57BL6J_3618741	Mir196b	miRBase:MI0001151,NCBI_Gene:723820,ENSEMBL:ENSMUSG00000065443	MGI:3618741	miRNA gene	microRNA 196b
6	gene	52.23120	52.24085	negative	MGI_C57BL6J_96171	Hoxa10	NCBI_Gene:15395,ENSEMBL:ENSMUSG00000000938	MGI:96171	protein coding gene	homeobox A10
6	gene	52.24211	52.24581	negative	MGI_C57BL6J_96172	Hoxa11	NCBI_Gene:15396,ENSEMBL:ENSMUSG00000038210	MGI:96172	protein coding gene	homeobox A11
6	gene	52.24439	52.24980	positive	MGI_C57BL6J_107208	Hoxa11os	NCBI_Gene:15397,ENSEMBL:ENSMUSG00000086427	MGI:107208	lncRNA gene	homeobox A11, opposite strand
6	gene	52.24601	52.24610	positive	MGI_C57BL6J_5531414	Gm28032	ENSEMBL:ENSMUSG00000098717	MGI:5531414	unclassified non-coding RNA gene	predicted gene, 28032
6	gene	52.24640	52.24659	positive	MGI_C57BL6J_5530874	Gm27492	ENSEMBL:ENSMUSG00000098435	MGI:5530874	unclassified non-coding RNA gene	predicted gene, 27492
6	gene	52.24672	52.24681	positive	MGI_C57BL6J_5531077	Gm27695	ENSEMBL:ENSMUSG00000098969	MGI:5531077	unclassified non-coding RNA gene	predicted gene, 27695
6	gene	52.24742	52.24765	positive	MGI_C57BL6J_5531199	Gm27817	ENSEMBL:ENSMUSG00000098683	MGI:5531199	unclassified non-coding RNA gene	predicted gene, 27817
6	gene	52.24833	52.24853	positive	MGI_C57BL6J_5530836	Gm27454	ENSEMBL:ENSMUSG00000099270	MGI:5530836	unclassified non-coding RNA gene	predicted gene, 27454
6	gene	52.24930	52.24947	positive	MGI_C57BL6J_5530925	Gm27543	ENSEMBL:ENSMUSG00000099248	MGI:5530925	unclassified non-coding RNA gene	predicted gene, 27543
6	gene	52.25622	52.25746	negative	MGI_C57BL6J_1924645	9530018H14Rik	ENSEMBL:ENSMUSG00000102373	MGI:1924645	unclassified gene	RIKEN cDNA 9530018H14 gene
6	gene	52.25769	52.26088	negative	MGI_C57BL6J_96173	Hoxa13	NCBI_Gene:15398,ENSEMBL:ENSMUSG00000038203	MGI:96173	protein coding gene	homeobox A13
6	gene	52.26115	52.26121	positive	MGI_C57BL6J_5530662	Gm27280	ENSEMBL:ENSMUSG00000098484	MGI:5530662	unclassified non-coding RNA gene	predicted gene, 27280
6	gene	52.26259	52.26297	positive	MGI_C57BL6J_5531367	Gm27985	ENSEMBL:ENSMUSG00000099173	MGI:5531367	unclassified non-coding RNA gene	predicted gene, 27985
6	gene	52.26277	52.26760	positive	MGI_C57BL6J_3642509	Hottip	NCBI_Gene:791364,ENSEMBL:ENSMUSG00000055408	MGI:3642509	lncRNA gene	Hoxa distal transcript antisense RNA
6	gene	52.26306	52.26342	positive	MGI_C57BL6J_5530765	Gm27383	ENSEMBL:ENSMUSG00000099229	MGI:5530765	unclassified non-coding RNA gene	predicted gene, 27383
6	gene	52.26658	52.26675	positive	MGI_C57BL6J_5531248	Gm27866	ENSEMBL:ENSMUSG00000098538	MGI:5531248	unclassified non-coding RNA gene	predicted gene, 27866
6	gene	52.29712	52.29785	positive	MGI_C57BL6J_5690686	Gm44294	ENSEMBL:ENSMUSG00000107463	MGI:5690686	unclassified gene	predicted gene, 44294
6	gene	52.30839	52.31483	negative	MGI_C57BL6J_1917843	Evx1os	NCBI_Gene:70593,ENSEMBL:ENSMUSG00000086126	MGI:1917843	antisense lncRNA gene	even skipped homeotic gene 1, opposite strand
6	gene	52.31350	52.31839	positive	MGI_C57BL6J_95461	Evx1	NCBI_Gene:14028,ENSEMBL:ENSMUSG00000005503	MGI:95461	protein coding gene	even-skipped homeobox 1
6	pseudogene	52.34669	52.34700	negative	MGI_C57BL6J_3646863	Gm8129	NCBI_Gene:666487,ENSEMBL:ENSMUSG00000059159	MGI:3646863	pseudogene	predicted pseudogene 8129
6	pseudogene	52.35754	52.35782	negative	MGI_C57BL6J_3705761	Gm15054	ENSEMBL:ENSMUSG00000084282	MGI:3705761	pseudogene	predicted gene 15054
6	gene	52.49245	52.50009	positive	MGI_C57BL6J_1921554	1700094M24Rik	NCBI_Gene:74304,ENSEMBL:ENSMUSG00000107895	MGI:1921554	lncRNA gene	RIKEN cDNA 1700094M24 gene
6	gene	52.50989	52.51404	positive	MGI_C57BL6J_5690420	Gm44028	ENSEMBL:ENSMUSG00000108062	MGI:5690420	lncRNA gene	predicted gene, 44028
6	gene	52.54623	52.64039	negative	MGI_C57BL6J_1889802	Hibadh	NCBI_Gene:58875,ENSEMBL:ENSMUSG00000029776	MGI:1889802	protein coding gene	3-hydroxyisobutyrate dehydrogenase
6	gene	52.56055	52.56323	positive	MGI_C57BL6J_5690837	Gm44445	ENSEMBL:ENSMUSG00000107647	MGI:5690837	unclassified gene	predicted gene, 44445
6	gene	52.56596	52.57981	negative	MGI_C57BL6J_5592206	Gm33047	NCBI_Gene:102635799	MGI:5592206	lncRNA gene	predicted gene, 33047
6	gene	52.59950	52.60325	negative	MGI_C57BL6J_5690826	Gm44434	ENSEMBL:ENSMUSG00000107813	MGI:5690826	unclassified gene	predicted gene, 44434
6	gene	52.63923	52.63936	negative	MGI_C57BL6J_5454132	Gm24355	ENSEMBL:ENSMUSG00000064792	MGI:5454132	snoRNA gene	predicted gene, 24355
6	gene	52.71334	52.71395	negative	MGI_C57BL6J_5690358	Gm43966	ENSEMBL:ENSMUSG00000108170	MGI:5690358	unclassified gene	predicted gene, 43966
6	gene	52.71357	52.76678	positive	MGI_C57BL6J_1289308	Tax1bp1	NCBI_Gene:52440,ENSEMBL:ENSMUSG00000004535	MGI:1289308	protein coding gene	Tax1 (human T cell leukemia virus type I) binding protein 1
6	pseudogene	52.72263	52.72293	negative	MGI_C57BL6J_5690359	Gm43967	ENSEMBL:ENSMUSG00000108036	MGI:5690359	pseudogene	predicted gene, 43967
6	gene	52.76806	53.06863	negative	MGI_C57BL6J_2141450	Jazf1	NCBI_Gene:231986,ENSEMBL:ENSMUSG00000063568	MGI:2141450	protein coding gene	JAZF zinc finger 1
6	pseudogene	52.84311	52.84370	negative	MGI_C57BL6J_3783020	Gm15572	ENSEMBL:ENSMUSG00000081872	MGI:3783020	pseudogene	predicted gene 15572
6	gene	52.96516	52.97656	negative	MGI_C57BL6J_5592378	Gm33219	NCBI_Gene:102636035	MGI:5592378	lncRNA gene	predicted gene, 33219
6	gene	53.01039	53.01053	negative	MGI_C57BL6J_5455992	Gm26215	ENSEMBL:ENSMUSG00000089209	MGI:5455992	snoRNA gene	predicted gene, 26215
6	pseudogene	53.04562	53.04705	positive	MGI_C57BL6J_3783021	Gm15573	NCBI_Gene:108169143,ENSEMBL:ENSMUSG00000080759	MGI:3783021	pseudogene	predicted gene 15573
6	gene	53.06009	53.06595	negative	MGI_C57BL6J_5592256	Gm33097	NCBI_Gene:102635867	MGI:5592256	lncRNA gene	predicted gene, 33097
6	pseudogene	53.17055	53.17174	negative	MGI_C57BL6J_3644270	Gm8143	NCBI_Gene:666516,ENSEMBL:ENSMUSG00000108028	MGI:3644270	pseudogene	predicted gene 8143
6	gene	53.22116	53.22660	positive	MGI_C57BL6J_3779443	Gm4872	NCBI_Gene:231989,ENSEMBL:ENSMUSG00000107935	MGI:3779443	lncRNA gene	predicted gene 4872
6	gene	53.26248	53.26823	negative	MGI_C57BL6J_5592507	Gm33348	NCBI_Gene:102636219	MGI:5592507	lncRNA gene	predicted gene, 33348
6	gene	53.28722	53.70038	positive	MGI_C57BL6J_2443973	Creb5	NCBI_Gene:231991,ENSEMBL:ENSMUSG00000053007	MGI:2443973	protein coding gene	cAMP responsive element binding protein 5
6	gene	53.43397	53.43414	positive	MGI_C57BL6J_5455595	Gm25818	ENSEMBL:ENSMUSG00000096147	MGI:5455595	snRNA gene	predicted gene, 25818
6	gene	53.46951	53.47175	negative	MGI_C57BL6J_5621700	Gm38815	NCBI_Gene:105242662	MGI:5621700	lncRNA gene	predicted gene, 38815
6	gene	53.49354	53.49828	positive	MGI_C57BL6J_5621699	Gm38814	NCBI_Gene:105242661	MGI:5621699	lncRNA gene	predicted gene, 38814
6	gene	53.58135	53.59288	negative	MGI_C57BL6J_5592551	Gm33392	NCBI_Gene:102636280	MGI:5592551	lncRNA gene	predicted gene, 33392
6	gene	53.66777	53.66998	positive	MGI_C57BL6J_5690472	Gm44080	ENSEMBL:ENSMUSG00000108004	MGI:5690472	unclassified gene	predicted gene, 44080
6	pseudogene	53.77736	53.77818	positive	MGI_C57BL6J_3644732	Gm5306	NCBI_Gene:384386,ENSEMBL:ENSMUSG00000107984	MGI:3644732	pseudogene	predicted gene 5306
6	gene	53.81547	53.82083	negative	MGI_C57BL6J_1914123	Tril	NCBI_Gene:66873,ENSEMBL:ENSMUSG00000043496	MGI:1914123	protein coding gene	TLR4 interactor with leucine-rich repeats
6	gene	53.81874	53.86818	positive	MGI_C57BL6J_3704267	Gm16499	NCBI_Gene:100049166,ENSEMBL:ENSMUSG00000108255,ENSEMBL:ENSMUSG00000108175	MGI:3704267	lncRNA gene	predicted gene 16499
6	gene	53.84417	53.84506	negative	MGI_C57BL6J_1923135	4930566K11Rik	NA	NA	unclassified gene	RIKEN cDNA 4930566K11 gene
6	gene	53.87202	53.87215	negative	MGI_C57BL6J_5452687	Gm22910	ENSEMBL:ENSMUSG00000094527	MGI:5452687	snoRNA gene	predicted gene, 22910
6	gene	53.87328	53.97867	negative	MGI_C57BL6J_1918537	Cpvl	NCBI_Gene:71287,ENSEMBL:ENSMUSG00000052955	MGI:1918537	protein coding gene	carboxypeptidase, vitellogenic-like
6	gene	53.88076	53.88310	positive	MGI_C57BL6J_5592875	Gm33716	NCBI_Gene:102636723	MGI:5592875	lncRNA gene	predicted gene, 33716
6	gene	53.97869	54.01803	positive	MGI_C57BL6J_2443531	4921529L05Rik	NCBI_Gene:320178,ENSEMBL:ENSMUSG00000108060	MGI:2443531	lncRNA gene	RIKEN cDNA 4921529L05 gene
6	gene	54.03955	54.30181	positive	MGI_C57BL6J_1917243	Chn2	NCBI_Gene:69993,ENSEMBL:ENSMUSG00000004633	MGI:1917243	protein coding gene	chimerin 2
6	gene	54.13952	54.15144	negative	MGI_C57BL6J_1925866	9530036M11Rik	NCBI_Gene:78616,ENSEMBL:ENSMUSG00000087670	MGI:1925866	lncRNA gene	RIKEN cDNA 9530036M11 gene
6	pseudogene	54.17720	54.17773	negative	MGI_C57BL6J_3782973	Gm15526	NCBI_Gene:108169144,ENSEMBL:ENSMUSG00000080205	MGI:3782973	pseudogene	predicted gene 15526
6	gene	54.24574	54.27908	negative	MGI_C57BL6J_3782974	Gm15527	ENSEMBL:ENSMUSG00000086946	MGI:3782974	lncRNA gene	predicted gene 15527
6	gene	54.26968	54.43022	negative	MGI_C57BL6J_1918824	9130019P16Rik	NCBI_Gene:100042056,ENSEMBL:ENSMUSG00000073067	MGI:1918824	lncRNA gene	RIKEN cDNA 9130019P16 gene
6	gene	54.32583	54.32812	negative	MGI_C57BL6J_1921781	9030405F24Rik	NA	NA	unclassified gene	RIKEN cDNA 9030405F24 gene
6	gene	54.32583	54.33020	positive	MGI_C57BL6J_1925254	Prr15	NCBI_Gene:78004,ENSEMBL:ENSMUSG00000045725	MGI:1925254	protein coding gene	proline rich 15
6	pseudogene	54.32964	54.34344	positive	MGI_C57BL6J_5593328	Gm34169	NCBI_Gene:102637330	MGI:5593328	pseudogene	predicted gene, 34169
6	gene	54.42922	54.50377	positive	MGI_C57BL6J_3044681	Wipf3	NCBI_Gene:330319,ENSEMBL:ENSMUSG00000086040	MGI:3044681	protein coding gene	WAS/WASL interacting protein family, member 3
6	gene	54.46027	54.47468	negative	MGI_C57BL6J_5690418	Gm44026	NCBI_Gene:108169145,ENSEMBL:ENSMUSG00000108081	MGI:5690418	lncRNA gene	predicted gene, 44026
6	gene	54.47479	54.56652	negative	MGI_C57BL6J_1917188	Scrn1	NCBI_Gene:69938,ENSEMBL:ENSMUSG00000019124	MGI:1917188	protein coding gene	secernin 1
6	gene	54.57760	54.59731	negative	MGI_C57BL6J_2387639	Fkbp14	NCBI_Gene:231997,ENSEMBL:ENSMUSG00000038074	MGI:2387639	protein coding gene	FK506 binding protein 14
6	gene	54.59511	54.64584	positive	MGI_C57BL6J_2681164	Plekha8	NCBI_Gene:231999,ENSEMBL:ENSMUSG00000005225	MGI:2681164	protein coding gene	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
6	gene	54.65944	54.66256	positive	MGI_C57BL6J_5593408	Gm34249	NCBI_Gene:102637443	MGI:5593408	lncRNA gene	predicted gene, 34249
6	gene	54.68093	54.68192	negative	MGI_C57BL6J_5579108	Gm28402	ENSEMBL:ENSMUSG00000101651	MGI:5579108	lncRNA gene	predicted gene 28402
6	gene	54.68162	54.70385	positive	MGI_C57BL6J_1915485	Mturn	NCBI_Gene:68235,ENSEMBL:ENSMUSG00000038065	MGI:1915485	protein coding gene	maturin, neural progenitor differentiation regulator homolog (Xenopus)
6	gene	54.69365	54.69406	positive	MGI_C57BL6J_5690400	Gm44008	ENSEMBL:ENSMUSG00000108283	MGI:5690400	unclassified gene	predicted gene, 44008
6	gene	54.81375	54.81765	negative	MGI_C57BL6J_1917699	2610209C05Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 2610209C05 gene
6	gene	54.81692	54.89350	positive	MGI_C57BL6J_1196246	Znrf2	NCBI_Gene:387524,ENSEMBL:ENSMUSG00000058446	MGI:1196246	protein coding gene	zinc and ring finger 2
6	gene	54.90242	54.90573	positive	MGI_C57BL6J_5690577	Gm44185	ENSEMBL:ENSMUSG00000107841	MGI:5690577	unclassified gene	predicted gene, 44185
6	gene	54.92394	54.97267	negative	MGI_C57BL6J_1341839	Nod1	NCBI_Gene:107607,ENSEMBL:ENSMUSG00000038058	MGI:1341839	protein coding gene	nucleotide-binding oligomerization domain containing 1
6	gene	54.97465	54.97478	positive	MGI_C57BL6J_5454007	Gm24230	ENSEMBL:ENSMUSG00000077501	MGI:5454007	snoRNA gene	predicted gene, 24230
6	gene	54.98258	54.99296	negative	MGI_C57BL6J_95700	Ggct	NCBI_Gene:110175,ENSEMBL:ENSMUSG00000002797	MGI:95700	protein coding gene	gamma-glutamyl cyclotransferase
6	gene	55.00212	55.00400	positive	MGI_C57BL6J_5621424	Gm38539	NCBI_Gene:102641179	MGI:5621424	lncRNA gene	predicted gene, 38539
6	gene	55.03800	55.07950	positive	MGI_C57BL6J_2449057	Gars	NCBI_Gene:353172,ENSEMBL:ENSMUSG00000029777	MGI:2449057	protein coding gene	glycyl-tRNA synthetase
6	gene	55.09005	55.13302	negative	MGI_C57BL6J_894312	Crhr2	NCBI_Gene:12922,ENSEMBL:ENSMUSG00000003476	MGI:894312	protein coding gene	corticotropin releasing hormone receptor 2
6	gene	55.15443	55.16721	positive	MGI_C57BL6J_5593517	Gm34358	NCBI_Gene:102637587,ENSEMBL:ENSMUSG00000108285	MGI:5593517	lncRNA gene	predicted gene, 34358
6	gene	55.17063	55.17504	negative	MGI_C57BL6J_102963	Inmt	NCBI_Gene:21743,ENSEMBL:ENSMUSG00000003477	MGI:102963	protein coding gene	indolethylamine N-methyltransferase
6	gene	55.20334	55.32022	positive	MGI_C57BL6J_3583959	Mindy4	NCBI_Gene:330323,ENSEMBL:ENSMUSG00000038022	MGI:3583959	protein coding gene	MINDY lysine 48 deubiquitinase 4
6	gene	55.29626	55.30789	negative	MGI_C57BL6J_5690465	Gm44073	ENSEMBL:ENSMUSG00000107766	MGI:5690465	lncRNA gene	predicted gene, 44073
6	gene	55.30880	55.30891	negative	MGI_C57BL6J_5455235	Gm25458	ENSEMBL:ENSMUSG00000093878	MGI:5455235	miRNA gene	predicted gene, 25458
6	gene	55.32564	55.33084	negative	MGI_C57BL6J_5621704	Gm38819	NCBI_Gene:105242666	MGI:5621704	lncRNA gene	predicted gene, 38819
6	gene	55.33630	55.34855	positive	MGI_C57BL6J_103201	Aqp1	NCBI_Gene:11826,ENSEMBL:ENSMUSG00000004655	MGI:103201	protein coding gene	aquaporin 1
6	gene	55.37629	55.38853	positive	MGI_C57BL6J_95710	Ghrhr	NCBI_Gene:14602,ENSEMBL:ENSMUSG00000004654	MGI:95710	protein coding gene	growth hormone releasing hormone receptor
6	gene	55.39689	55.41228	positive	MGI_C57BL6J_5439415	6430584L05Rik	NCBI_Gene:330324,ENSEMBL:ENSMUSG00000108228	MGI:5439415	lncRNA gene	RIKEN cDNA 6430584L05 gene
6	gene	55.45150	55.50145	positive	MGI_C57BL6J_108449	Adcyap1r1	NCBI_Gene:11517,ENSEMBL:ENSMUSG00000029778	MGI:108449	protein coding gene	adenylate cyclase activating polypeptide 1 receptor 1
6	gene	55.53351	55.53361	positive	MGI_C57BL6J_5690744	Gm44352	ENSEMBL:ENSMUSG00000104746	MGI:5690744	miRNA gene	predicted gene, 44352
6	gene	55.53704	55.65178	positive	MGI_C57BL6J_5593600	Gm34441	NCBI_Gene:102637698	MGI:5593600	lncRNA gene	predicted gene, 34441
6	pseudogene	55.62508	55.62561	positive	MGI_C57BL6J_3781904	Gm3729	NCBI_Gene:100416934	MGI:3781904	pseudogene	predicted gene 3729
6	gene	55.67782	55.68126	negative	MGI_C57BL6J_106593	Neurod6	NCBI_Gene:11922,ENSEMBL:ENSMUSG00000037984	MGI:106593	protein coding gene	neurogenic differentiation 6
6	gene	55.68457	55.69457	positive	MGI_C57BL6J_3781457	Gm3279	NCBI_Gene:100041339,ENSEMBL:ENSMUSG00000108063	MGI:3781457	lncRNA gene	predicted gene 3279
6	gene	55.70057	55.70589	positive	MGI_C57BL6J_5593835	Gm34676	NCBI_Gene:102638001	MGI:5593835	lncRNA gene	predicted gene, 34676
6	gene	55.78959	55.80470	negative	MGI_C57BL6J_5621705	Gm38820	NCBI_Gene:105242667	MGI:5621705	lncRNA gene	predicted gene, 38820
6	gene	55.80463	55.97874	positive	MGI_C57BL6J_2685304	Itprid1	NCBI_Gene:232016,ENSEMBL:ENSMUSG00000037973	MGI:2685304	protein coding gene	ITPR interacting domain containing 1
6	gene	56.01750	56.03269	positive	MGI_C57BL6J_1333876	Ppp1r17	NCBI_Gene:19051,ENSEMBL:ENSMUSG00000002930	MGI:1333876	protein coding gene	protein phosphatase 1, regulatory subunit 17
6	pseudogene	56.06094	56.06148	negative	MGI_C57BL6J_5010284	Gm18099	NCBI_Gene:100416405	MGI:5010284	pseudogene	predicted gene, 18099
6	gene	56.06980	56.65251	negative	MGI_C57BL6J_108413	Pde1c	NCBI_Gene:18575,ENSEMBL:ENSMUSG00000004347	MGI:108413	protein coding gene	phosphodiesterase 1C
6	gene	56.17293	56.17303	negative	MGI_C57BL6J_5690805	Gm44413	ENSEMBL:ENSMUSG00000106152	MGI:5690805	miRNA gene	predicted gene, 44413
6	gene	56.36971	56.37194	positive	MGI_C57BL6J_5593912	Gm34753	NA	NA	unclassified non-coding RNA gene	predicted gene%2c 34753
6	gene	56.58120	56.65249	negative	MGI_C57BL6J_3644042	Gm8239	ENSEMBL:ENSMUSG00000107494	MGI:3644042	lncRNA gene	predicted gene 8239
6	gene	56.58371	56.58385	negative	MGI_C57BL6J_5454486	Gm24709	ENSEMBL:ENSMUSG00000096087	MGI:5454486	snoRNA gene	predicted gene, 24709
6	gene	56.60082	56.60095	negative	MGI_C57BL6J_5452270	Gm22493	ENSEMBL:ENSMUSG00000077682	MGI:5452270	snoRNA gene	predicted gene, 22493
6	gene	56.70106	56.70471	negative	MGI_C57BL6J_1913623	Lsm5	NCBI_Gene:66373,ENSEMBL:ENSMUSG00000091625	MGI:1913623	protein coding gene	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
6	gene	56.71450	56.71573	negative	MGI_C57BL6J_1918466	4933427C19Rik	NA	NA	unclassified gene	RIKEN cDNA 4933427C19 gene
6	gene	56.71490	56.76191	positive	MGI_C57BL6J_1926187	Avl9	NCBI_Gene:78937,ENSEMBL:ENSMUSG00000029787	MGI:1926187	protein coding gene	AVL9 cell migration associated
6	gene	56.77582	56.77735	negative	MGI_C57BL6J_1920419	3110035G12Rik	NA	NA	unclassified gene	RIKEN cDNA 3110035G12 gene
6	gene	56.77752	56.79827	negative	MGI_C57BL6J_2384811	Kbtbd2	NCBI_Gene:210973,ENSEMBL:ENSMUSG00000059486	MGI:2384811	protein coding gene	kelch repeat and BTB (POZ) domain containing 2
6	gene	56.79759	56.79920	positive	MGI_C57BL6J_3641874	Gm10209	ENSEMBL:ENSMUSG00000108080	MGI:3641874	protein coding gene	predicted gene 10209
6	gene	56.83206	56.87936	positive	MGI_C57BL6J_1350921	Fkbp9	NCBI_Gene:27055,ENSEMBL:ENSMUSG00000029781	MGI:1350921	protein coding gene	FK506 binding protein 9
6	gene	56.88240	56.92393	negative	MGI_C57BL6J_1927186	Nt5c3	NCBI_Gene:107569,ENSEMBL:ENSMUSG00000029780	MGI:1927186	protein coding gene	5’-nucleotidase, cytosolic III
6	gene	56.88443	56.88611	positive	MGI_C57BL6J_5609018	AK013988	NA	NA	unclassified non-coding RNA gene	expressed sequence AK013988
6	gene	56.90591	56.90658	negative	MGI_C57BL6J_3781966	Gm3793	ENSEMBL:ENSMUSG00000108260	MGI:3781966	unclassified gene	predicted gene 3793
6	gene	56.92401	56.95810	positive	MGI_C57BL6J_2159457	Vmn1r4	NCBI_Gene:171194,ENSEMBL:ENSMUSG00000071893	MGI:2159457	protein coding gene	vomeronasal 1 receptor 4
6	gene	56.94184	56.94482	negative	MGI_C57BL6J_5690441	Gm44049	ENSEMBL:ENSMUSG00000108021	MGI:5690441	unclassified gene	predicted gene, 44049
6	gene	56.97027	56.98839	positive	MGI_C57BL6J_2159455	Vmn1r5	NCBI_Gene:171192,ENSEMBL:ENSMUSG00000090346	MGI:2159455	protein coding gene	vomeronasal 1 receptor 5
6	gene	56.99724	57.00982	positive	MGI_C57BL6J_2159456	Vmn1r6	NCBI_Gene:171193,ENSEMBL:ENSMUSG00000115701	MGI:2159456	protein coding gene	vomeronasal 1 receptor 6
6	gene	57.02411	57.02532	negative	MGI_C57BL6J_2159467	Vmn1r7	NCBI_Gene:434016,ENSEMBL:ENSMUSG00000093696	MGI:2159467	protein coding gene	vomeronasal 1 receptor 7
6	gene	57.03228	57.03739	positive	MGI_C57BL6J_2159469	Vmn1r8	NCBI_Gene:171205,ENSEMBL:ENSMUSG00000061208	MGI:2159469	protein coding gene	vomeronasal 1 receptor 8
6	gene	57.06679	57.07491	positive	MGI_C57BL6J_2159466	Vmn1r9	NCBI_Gene:171203,ENSEMBL:ENSMUSG00000091541	MGI:2159466	protein coding gene	vomeronasal 1 receptor 9
6	gene	57.10945	57.11503	positive	MGI_C57BL6J_2148522	Vmn1r10	NCBI_Gene:113858,ENSEMBL:ENSMUSG00000115181	MGI:2148522	protein coding gene	vomeronasal 1 receptor 10
6	gene	57.13345	57.13962	positive	MGI_C57BL6J_2148524	Vmn1r11	NCBI_Gene:113860,ENSEMBL:ENSMUSG00000115236	MGI:2148524	protein coding gene	vomeronasal 1 receptor 11
6	gene	57.15692	57.16533	positive	MGI_C57BL6J_3645555	Vmn1r12	NCBI_Gene:626397,ENSEMBL:ENSMUSG00000057981	MGI:3645555	protein coding gene	vomeronasal 1 receptor 12
6	pseudogene	57.18849	57.18944	positive	MGI_C57BL6J_2148525	Vmn1r-ps8	NCBI_Gene:113861,ENSEMBL:ENSMUSG00000093728	MGI:2148525	pseudogene	vomeronasal 1 receptor, pseudogene 8
6	gene	57.20090	57.21480	positive	MGI_C57BL6J_2148526	Vmn1r13	NCBI_Gene:113862,ENSEMBL:ENSMUSG00000064259	MGI:2148526	protein coding gene	vomeronasal 1 receptor 13
6	gene	57.22615	57.24088	positive	MGI_C57BL6J_2148528	Vmn1r14	NCBI_Gene:113864,ENSEMBL:ENSMUSG00000114982	MGI:2148528	protein coding gene	vomeronasal 1 receptor 14
6	gene	57.25795	57.25997	positive	MGI_C57BL6J_2148527	Vmn1r15	NCBI_Gene:113863,ENSEMBL:ENSMUSG00000115199	MGI:2148527	protein coding gene	vomeronasal 1 receptor 15
6	pseudogene	57.27802	57.27867	positive	MGI_C57BL6J_3781521	Vmn1r-ps9	NCBI_Gene:100041445,ENSEMBL:ENSMUSG00000093520	MGI:3781521	pseudogene	vomeronasal 1 receptor, pseudogene 9
6	pseudogene	57.31294	57.31383	positive	MGI_C57BL6J_2148536	Vmn1r-ps10	NCBI_Gene:113874,ENSEMBL:ENSMUSG00000093621	MGI:2148536	pseudogene	vomeronasal 1 receptor, pseudogene 10
6	gene	57.31805	57.32949	negative	MGI_C57BL6J_2159465	Vmn1r16	NCBI_Gene:171202,ENSEMBL:ENSMUSG00000115792	MGI:2159465	protein coding gene	vomeronasal 1 receptor 16
6	gene	57.35924	57.36373	negative	MGI_C57BL6J_2159452	Vmn1r17	NCBI_Gene:171189,ENSEMBL:ENSMUSG00000115644	MGI:2159452	protein coding gene	vomeronasal 1 receptor 17
6	gene	57.37666	57.39578	negative	MGI_C57BL6J_2159462	Vmn1r18	NCBI_Gene:171199,ENSEMBL:ENSMUSG00000091382	MGI:2159462	protein coding gene	vomeronasal 1 receptor 18
6	gene	57.40378	57.40603	positive	MGI_C57BL6J_2159463	Vmn1r19	NCBI_Gene:171200,ENSEMBL:ENSMUSG00000115799	MGI:2159463	protein coding gene	vomeronasal 1 receptor 19
6	gene	57.42893	57.43526	positive	MGI_C57BL6J_3644381	Vmn1r20	NCBI_Gene:434017,ENSEMBL:ENSMUSG00000115253	MGI:3644381	protein coding gene	vomeronasal 1 receptor 20
6	pseudogene	57.44736	57.44833	negative	MGI_C57BL6J_3643544	Vmn1r-ps11	NCBI_Gene:666822,ENSEMBL:ENSMUSG00000093398	MGI:3643544	pseudogene	vomeronasal 1 receptor, pseudogene 11
6	gene	57.46407	57.49953	positive	MGI_C57BL6J_3612486	4930533I22Rik	NCBI_Gene:434018,ENSEMBL:ENSMUSG00000093535	MGI:3612486	lncRNA gene	RIKEN cDNA 4930533I22 gene
6	gene	57.48512	57.62603	positive	MGI_C57BL6J_5753769	Gm45193	ENSEMBL:ENSMUSG00000108112	MGI:5753769	lncRNA gene	predicted gene 45193
6	gene	57.50650	57.53553	negative	MGI_C57BL6J_2442111	Ppm1k	NCBI_Gene:243382,ENSEMBL:ENSMUSG00000037826	MGI:2442111	protein coding gene	protein phosphatase 1K (PP2C domain containing)
6	gene	57.56579	57.56611	positive	MGI_C57BL6J_5531278	Gm27896	ENSEMBL:ENSMUSG00000092903	MGI:5531278	unclassified non-coding RNA gene	predicted gene, 27896
6	gene	57.58099	57.66514	positive	MGI_C57BL6J_1914388	Herc6	NCBI_Gene:67138,ENSEMBL:ENSMUSG00000029798	MGI:1914388	protein coding gene	hect domain and RLD 6
6	pseudogene	57.61697	57.61731	negative	MGI_C57BL6J_5011429	Gm19244	NCBI_Gene:100462737,ENSEMBL:ENSMUSG00000107627	MGI:5011429	pseudogene	predicted gene, 19244
6	gene	57.68474	57.68758	negative	MGI_C57BL6J_5610625	Gm37397	ENSEMBL:ENSMUSG00000104204	MGI:5610625	unclassified gene	predicted gene, 37397
6	gene	57.68474	57.69208	negative	MGI_C57BL6J_1913709	Pyurf	NCBI_Gene:66459,ENSEMBL:ENSMUSG00000043162	MGI:1913709	protein coding gene	Pigy upstream reading frame
6	pseudogene	57.68943	57.68965	negative	MGI_C57BL6J_5477206	Gm26712	ENSEMBL:ENSMUSG00000097656	MGI:5477206	pseudogene	predicted gene, 26712
6	gene	57.70246	57.73945	positive	MGI_C57BL6J_1919085	Lancl2	NCBI_Gene:71835,ENSEMBL:ENSMUSG00000062190	MGI:1919085	protein coding gene	LanC (bacterial lantibiotic synthetase component C)-like 2
6	gene	57.72781	57.82537	negative	MGI_C57BL6J_2141658	Vopp1	NCBI_Gene:232023,ENSEMBL:ENSMUSG00000037788	MGI:2141658	protein coding gene	vesicular, overexpressed in cancer, prosurvival protein 1
6	gene	57.84283	57.85034	negative	MGI_C57BL6J_2159464	Vmn1r21	NCBI_Gene:171201,ENSEMBL:ENSMUSG00000115343	MGI:2159464	protein coding gene	vomeronasal 1 receptor 21
6	gene	57.84559	57.84831	positive	MGI_C57BL6J_5690506	Gm44114	ENSEMBL:ENSMUSG00000107431	MGI:5690506	unclassified gene	predicted gene, 44114
6	gene	57.85982	57.85995	negative	MGI_C57BL6J_5455503	Gm25726	ENSEMBL:ENSMUSG00000077717	MGI:5455503	snoRNA gene	predicted gene, 25726
6	pseudogene	57.87241	57.87292	negative	MGI_C57BL6J_3643065	Vmn1r-ps12	NCBI_Gene:626582,ENSEMBL:ENSMUSG00000093530	MGI:3643065	pseudogene	vomeronasal 1 receptor, pseudogene 12
6	gene	57.89813	57.90803	negative	MGI_C57BL6J_2159459	Vmn1r22	NCBI_Gene:171196,ENSEMBL:ENSMUSG00000115091	MGI:2159459	protein coding gene	vomeronasal 1 receptor 22
6	gene	57.92584	57.92684	negative	MGI_C57BL6J_2159460	Vmn1r23	NCBI_Gene:171197,ENSEMBL:ENSMUSG00000093376	MGI:2159460	protein coding gene	vomeronasal 1 receptor 23
6	pseudogene	57.94968	57.94997	negative	MGI_C57BL6J_5313107	Gm20660	ENSEMBL:ENSMUSG00000093541	MGI:5313107	pseudogene	predicted gene 20660
6	pseudogene	57.95007	57.95047	positive	MGI_C57BL6J_3781560	Gm3382	NCBI_Gene:100041514	MGI:3781560	pseudogene	predicted gene 3382
6	gene	57.95471	57.96150	negative	MGI_C57BL6J_2159454	Vmn1r24	NCBI_Gene:171191,ENSEMBL:ENSMUSG00000115507	MGI:2159454	protein coding gene	vomeronasal 1 receptor 24
6	gene	57.97830	57.98081	negative	MGI_C57BL6J_2148529	Vmn1r25	NCBI_Gene:113865,ENSEMBL:ENSMUSG00000115668	MGI:2148529	protein coding gene	vomeronasal 1 receptor 25
6	pseudogene	57.99299	57.99358	negative	MGI_C57BL6J_3852363	Vmn1r-ps13	NCBI_Gene:100312486,ENSEMBL:ENSMUSG00000107678	MGI:3852363	pseudogene	vomeronasal 1 receptor, pseudogene 13
6	gene	58.00493	58.01516	negative	MGI_C57BL6J_2159453	Vmn1r26	NCBI_Gene:171190,ENSEMBL:ENSMUSG00000048697	MGI:2159453	protein coding gene	vomeronasal 1 receptor 26
6	pseudogene	58.01748	58.01794	positive	MGI_C57BL6J_3647234	Rps15-ps2	NCBI_Gene:633683,ENSEMBL:ENSMUSG00000071419	MGI:3647234	pseudogene	ribosomal protein S15, pseudogene 2
6	pseudogene	58.04645	58.04990	negative	MGI_C57BL6J_3645438	Vmn1r-ps14	NCBI_Gene:626649,ENSEMBL:ENSMUSG00000093382	MGI:3645438	pseudogene	vomeronasal 1 receptor, pseudogene 14
6	pseudogene	58.07360	58.07913	negative	MGI_C57BL6J_3648676	Vmn1r-ps15	NCBI_Gene:626659,ENSEMBL:ENSMUSG00000093666	MGI:3648676	pseudogene	vomeronasal 1 receptor, pseudogene 15
6	pseudogene	58.09108	58.09267	positive	MGI_C57BL6J_3648885	Gm6695	NCBI_Gene:626672,ENSEMBL:ENSMUSG00000093560	MGI:3648885	pseudogene	predicted gene 6695
6	pseudogene	58.10802	58.10825	negative	MGI_C57BL6J_3852364	Vmn1r-ps16	NCBI_Gene:100312487,ENSEMBL:ENSMUSG00000107530	MGI:3852364	pseudogene	vomeronasal 1 receptor, pseudogene 16
6	pseudogene	58.11573	58.11663	negative	MGI_C57BL6J_3643137	Vmn1r-ps17	NCBI_Gene:666893,ENSEMBL:ENSMUSG00000093743	MGI:3643137	pseudogene	vomeronasal 1 receptor, pseudogene 17
6	pseudogene	58.13589	58.13614	positive	MGI_C57BL6J_5313165	Gm20718	ENSEMBL:ENSMUSG00000093708	MGI:5313165	pseudogene	predicted gene 20718
6	gene	58.19232	58.19476	positive	MGI_C57BL6J_5690386	Gm43994	ENSEMBL:ENSMUSG00000107521	MGI:5690386	lncRNA gene	predicted gene, 43994
6	pseudogene	58.20569	58.20700	positive	MGI_C57BL6J_3781590	Vmn1r-ps18	NCBI_Gene:100041571,ENSEMBL:ENSMUSG00000093731	MGI:3781590	pseudogene	vomeronasal 1 receptor, pseudogene 18
6	gene	58.21309	58.21882	negative	MGI_C57BL6J_2159470	Vmn1r27	NCBI_Gene:171206,ENSEMBL:ENSMUSG00000071428	MGI:2159470	protein coding gene	vomeronasal 1 receptor 27
6	pseudogene	58.25662	58.25755	negative	MGI_C57BL6J_3647074	Vmn1r-ps19	NCBI_Gene:626724,ENSEMBL:ENSMUSG00000093522	MGI:3647074	pseudogene	vomeronasal 1 receptor, pseudogene 19
6	gene	58.26204	58.27564	positive	MGI_C57BL6J_2159461	Vmn1r28	NCBI_Gene:171198,ENSEMBL:ENSMUSG00000115705	MGI:2159461	protein coding gene	vomeronasal 1 receptor 28
6	gene	58.30155	58.31168	positive	MGI_C57BL6J_2148523	Vmn1r29	NCBI_Gene:113859,ENSEMBL:ENSMUSG00000091734	MGI:2148523	protein coding gene	vomeronasal 1 receptor 29
6	pseudogene	58.39405	58.39442	positive	MGI_C57BL6J_5313121	Gm20674	ENSEMBL:ENSMUSG00000093547	MGI:5313121	pseudogene	predicted gene 20674
6	pseudogene	58.40641	58.40736	negative	MGI_C57BL6J_3645210	Vmn1r-ps20	NCBI_Gene:666928,ENSEMBL:ENSMUSG00000093702	MGI:3645210	pseudogene	vomeronasal 1 receptor, pseudogene 20
6	gene	58.43416	58.44362	negative	MGI_C57BL6J_2159458	Vmn1r30	NCBI_Gene:171195,ENSEMBL:ENSMUSG00000095670	MGI:2159458	protein coding gene	vomeronasal 1 receptor 30
6	pseudogene	58.43870	58.43886	negative	MGI_C57BL6J_5690408	Gm44016	ENSEMBL:ENSMUSG00000107518	MGI:5690408	pseudogene	predicted gene, 44016
6	pseudogene	58.45507	58.45599	negative	MGI_C57BL6J_3852365	Vmn1r-ps21	NCBI_Gene:100312488,ENSEMBL:ENSMUSG00000093461	MGI:3852365	pseudogene	vomeronasal 1 receptor, pseudogene 21
6	gene	58.45787	58.53369	negative	MGI_C57BL6J_5594236	Gm35077	NCBI_Gene:102638540,ENSEMBL:ENSMUSG00000107960	MGI:5594236	lncRNA gene	predicted gene, 35077
6	pseudogene	58.46111	58.46154	positive	MGI_C57BL6J_5313120	Gm20673	ENSEMBL:ENSMUSG00000093747	MGI:5313120	pseudogene	predicted gene 20673
6	gene	58.47094	58.47533	negative	MGI_C57BL6J_3649162	Vmn1r31	NCBI_Gene:626828,ENSEMBL:ENSMUSG00000115404	MGI:3649162	protein coding gene	vomeronasal 1 receptor 31
6	pseudogene	58.49434	58.49525	negative	MGI_C57BL6J_3647778	Vmn1r-ps22	NCBI_Gene:666954,ENSEMBL:ENSMUSG00000093518	MGI:3647778	pseudogene	vomeronasal 1 receptor, pseudogene 22
6	pseudogene	58.50444	58.50474	negative	MGI_C57BL6J_3852366	Vmn1r-ps23	NCBI_Gene:100312489,ENSEMBL:ENSMUSG00000093588	MGI:3852366	pseudogene	vomeronasal 1 receptor, pseudogene 23
6	pseudogene	58.51227	58.51253	positive	MGI_C57BL6J_5313119	Gm20672	ENSEMBL:ENSMUSG00000093741	MGI:5313119	pseudogene	predicted gene 20672
6	gene	58.53397	58.58425	negative	MGI_C57BL6J_5825580	Gm45943	NCBI_Gene:108167332	MGI:5825580	protein coding gene	predicted gene, 45943
6	gene	58.58449	58.69568	positive	MGI_C57BL6J_1347061	Abcg2	NCBI_Gene:26357,ENSEMBL:ENSMUSG00000029802	MGI:1347061	protein coding gene	ATP binding cassette subfamily G member 2 (Junior blood group)
6	gene	58.58575	58.58656	positive	MGI_C57BL6J_1921131	4930430M16Rik	NA	NA	unclassified gene	RIKEN cDNA 4930430M16 gene
6	gene	58.67971	58.68064	negative	MGI_C57BL6J_1917453	2310061B05Rik	NA	NA	unclassified gene	RIKEN cDNA 2310061B05 gene
6	gene	58.75891	58.81375	negative	MGI_C57BL6J_5621707	Gm38822	NCBI_Gene:105242670	MGI:5621707	lncRNA gene	predicted gene, 38822
6	pseudogene	58.78169	58.78194	negative	MGI_C57BL6J_5690291	Gm43899	ENSEMBL:ENSMUSG00000108164	MGI:5690291	pseudogene	predicted gene, 43899
6	gene	58.83145	58.92040	positive	MGI_C57BL6J_1921248	Herc3	NCBI_Gene:73998,ENSEMBL:ENSMUSG00000029804	MGI:1921248	protein coding gene	hect domain and RLD 3
6	gene	58.90523	58.90713	negative	MGI_C57BL6J_1923555	Nap1l5	NCBI_Gene:58243,ENSEMBL:ENSMUSG00000055430	MGI:1923555	protein coding gene	nucleosome assembly protein 1-like 5
6	gene	58.93209	59.02455	negative	MGI_C57BL6J_1889842	Fam13a	NCBI_Gene:58909,ENSEMBL:ENSMUSG00000037709	MGI:1889842	protein coding gene	family with sequence similarity 13, member A
6	gene	58.96487	58.97223	positive	MGI_C57BL6J_5753636	Gm45060	ENSEMBL:ENSMUSG00000107439	MGI:5753636	lncRNA gene	predicted gene 45060
6	gene	58.96522	58.99231	positive	MGI_C57BL6J_1918734	8430415O14Rik	NCBI_Gene:71484	MGI:1918734	lncRNA gene	RIKEN cDNA 8430415O14 gene
6	gene	58.96565	59.00208	positive	MGI_C57BL6J_3034340	BB365896	ENSEMBL:ENSMUSG00000092323	MGI:3034340	lncRNA gene	expressed sequence BB365896
6	gene	58.97320	58.97529	positive	MGI_C57BL6J_5753637	Gm45061	ENSEMBL:ENSMUSG00000108075	MGI:5753637	unclassified gene	predicted gene 45061
6	pseudogene	59.03689	59.03938	positive	MGI_C57BL6J_5011350	Gm19165	NCBI_Gene:100418369,ENSEMBL:ENSMUSG00000107449	MGI:5011350	pseudogene	predicted gene, 19165
6	gene	59.09925	59.09938	positive	MGI_C57BL6J_5452144	Gm22367	ENSEMBL:ENSMUSG00000096371	MGI:5452144	snoRNA gene	predicted gene, 22367
6	pseudogene	59.19305	59.19325	negative	MGI_C57BL6J_5690297	Gm43905	ENSEMBL:ENSMUSG00000107987	MGI:5690297	pseudogene	predicted gene, 43905
6	gene	59.20887	59.21203	positive	MGI_C57BL6J_1915390	Tigd2	NCBI_Gene:68140,ENSEMBL:ENSMUSG00000049232	MGI:1915390	protein coding gene	tigger transposable element derived 2
6	gene	59.34450	59.42629	negative	MGI_C57BL6J_1924785	Gprin3	NCBI_Gene:243385,ENSEMBL:ENSMUSG00000045441	MGI:1924785	protein coding gene	GPRIN family member 3
6	gene	59.69817	59.70590	positive	MGI_C57BL6J_5594354	Gm35195	NCBI_Gene:102638695	MGI:5594354	lncRNA gene	predicted gene, 35195
6	gene	59.70575	59.70587	negative	MGI_C57BL6J_5452399	Gm22622	ENSEMBL:ENSMUSG00000094183	MGI:5452399	snoRNA gene	predicted gene, 22622
6	pseudogene	59.94233	59.94553	positive	MGI_C57BL6J_5010197	Gm18012	NCBI_Gene:100416270,ENSEMBL:ENSMUSG00000108110	MGI:5010197	pseudogene	predicted gene, 18012
6	gene	60.03197	60.15004	positive	MGI_C57BL6J_3644382	Gm5570	NCBI_Gene:434019,ENSEMBL:ENSMUSG00000073045	MGI:3644382	lncRNA gene	predicted gene 5570
6	gene	60.07106	60.07119	negative	MGI_C57BL6J_5452500	Gm22723	ENSEMBL:ENSMUSG00000095176	MGI:5452500	snoRNA gene	predicted gene, 22723
6	gene	60.17914	60.18178	positive	MGI_C57BL6J_5826622	Gm46985	NCBI_Gene:108169190	MGI:5826622	protein coding gene	predicted gene, 46985
6	gene	60.25079	60.25091	positive	MGI_C57BL6J_4422026	n-R5s162	ENSEMBL:ENSMUSG00000064515	MGI:4422026	rRNA gene	nuclear encoded rRNA 5S 162
6	gene	60.27904	60.40371	negative	MGI_C57BL6J_2443347	A530053G22Rik	NCBI_Gene:208079,ENSEMBL:ENSMUSG00000046764	MGI:2443347	lncRNA gene	RIKEN cDNA A530053G22 gene
6	gene	60.33980	60.37427	positive	MGI_C57BL6J_5594494	Gm35335	NCBI_Gene:102638876	MGI:5594494	lncRNA gene	predicted gene, 35335
6	gene	60.41120	60.44969	positive	MGI_C57BL6J_5621708	Gm38823	NCBI_Gene:105242671	MGI:5621708	lncRNA gene	predicted gene, 38823
6	pseudogene	60.46193	60.46211	negative	MGI_C57BL6J_5690781	Gm44389	ENSEMBL:ENSMUSG00000107863	MGI:5690781	pseudogene	predicted gene, 44389
6	gene	60.48996	60.49045	positive	MGI_C57BL6J_5690802	Gm44410	ENSEMBL:ENSMUSG00000108192	MGI:5690802	lncRNA gene	predicted gene, 44410
6	gene	60.58677	60.59155	positive	MGI_C57BL6J_5594545	Gm35386	NCBI_Gene:102638951,ENSEMBL:ENSMUSG00000108003	MGI:5594545	lncRNA gene	predicted gene, 35386
6	gene	60.73157	60.82986	negative	MGI_C57BL6J_1277151	Snca	NCBI_Gene:20617,ENSEMBL:ENSMUSG00000025889	MGI:1277151	protein coding gene	synuclein, alpha
6	pseudogene	60.76952	60.77118	negative	MGI_C57BL6J_3701602	Mageb16-ps2	NCBI_Gene:625863,ENSEMBL:ENSMUSG00000107755	MGI:3701602	pseudogene	melanoma antigen family B, 16, pseudogene 2
6	gene	60.79184	60.79587	negative	MGI_C57BL6J_5690256	Gm43864	ENSEMBL:ENSMUSG00000108168	MGI:5690256	unclassified gene	predicted gene, 43864
6	pseudogene	60.88244	60.88296	negative	MGI_C57BL6J_5690259	Gm43867	ENSEMBL:ENSMUSG00000108262	MGI:5690259	pseudogene	predicted gene, 43867
6	gene	60.92498	60.98938	positive	MGI_C57BL6J_1918195	Mmrn1	NCBI_Gene:70945,ENSEMBL:ENSMUSG00000054641	MGI:1918195	protein coding gene	multimerin 1
6	pseudogene	61.01685	61.01774	negative	MGI_C57BL6J_5011023	Gm18838	NCBI_Gene:100417805,ENSEMBL:ENSMUSG00000108098	MGI:5011023	pseudogene	predicted gene, 18838
6	pseudogene	61.04473	61.04499	negative	MGI_C57BL6J_5690284	Gm43892	ENSEMBL:ENSMUSG00000108299	MGI:5690284	pseudogene	predicted gene, 43892
6	gene	61.06470	61.06925	negative	MGI_C57BL6J_5690285	Gm43893	ENSEMBL:ENSMUSG00000108087	MGI:5690285	lncRNA gene	predicted gene, 43893
6	gene	61.14722	61.14791	negative	MGI_C57BL6J_5690286	Gm43894	ENSEMBL:ENSMUSG00000107652	MGI:5690286	lncRNA gene	predicted gene, 43894
6	gene	61.17229	61.18081	negative	MGI_C57BL6J_2444999	A730020E08Rik	NCBI_Gene:100504262,ENSEMBL:ENSMUSG00000097924	MGI:2444999	lncRNA gene	RIKEN cDNA A730020E08 gene
6	gene	61.18032	62.38287	positive	MGI_C57BL6J_3045354	Ccser1	NCBI_Gene:232035,ENSEMBL:ENSMUSG00000039578	MGI:3045354	protein coding gene	coiled-coil serine rich 1
6	gene	61.23173	61.23446	positive	MGI_C57BL6J_3026947	B230204D01Rik	NA	NA	unclassified gene	RIKEN cDNA B230204D01 gene
6	pseudogene	61.40061	61.40103	positive	MGI_C57BL6J_5690290	Gm43898	ENSEMBL:ENSMUSG00000107757	MGI:5690290	pseudogene	predicted gene, 43898
6	gene	61.97510	61.97713	positive	MGI_C57BL6J_5690288	Gm43896	ENSEMBL:ENSMUSG00000108246	MGI:5690288	unclassified gene	predicted gene, 43896
6	gene	61.99305	61.99639	positive	MGI_C57BL6J_2443660	A730075L09Rik	NA	NA	unclassified gene	RIKEN cDNA A730075L09 gene
6	pseudogene	62.29370	62.29401	negative	MGI_C57BL6J_5690289	Gm43897	ENSEMBL:ENSMUSG00000107590	MGI:5690289	pseudogene	predicted gene, 43897
6	pseudogene	62.30773	62.30926	negative	MGI_C57BL6J_5690287	Gm43895	ENSEMBL:ENSMUSG00000107908	MGI:5690287	pseudogene	predicted gene, 43895
6	pseudogene	62.58207	62.58320	positive	MGI_C57BL6J_5011422	Gm19237	NCBI_Gene:100418479,ENSEMBL:ENSMUSG00000108160	MGI:5011422	pseudogene	predicted gene, 19237
6	pseudogene	62.63058	62.63082	positive	MGI_C57BL6J_5690480	Gm44088	ENSEMBL:ENSMUSG00000107957	MGI:5690480	pseudogene	predicted gene, 44088
6	pseudogene	62.75680	62.75705	positive	MGI_C57BL6J_5690484	Gm44092	ENSEMBL:ENSMUSG00000108174	MGI:5690484	pseudogene	predicted gene, 44092
6	pseudogene	62.82010	62.82063	positive	MGI_C57BL6J_5010725	Gm18540	NCBI_Gene:100417337,ENSEMBL:ENSMUSG00000108007	MGI:5010725	pseudogene	predicted gene, 18540
6	pseudogene	62.92910	62.92948	positive	MGI_C57BL6J_3643923	Gm5001	NCBI_Gene:257772,ENSEMBL:ENSMUSG00000107854	MGI:3643923	pseudogene	predicted gene 5001
6	pseudogene	63.04496	63.04817	negative	MGI_C57BL6J_5011316	Gm19131	NCBI_Gene:100418306,ENSEMBL:ENSMUSG00000107708	MGI:5011316	pseudogene	predicted gene, 19131
6	pseudogene	63.16027	63.16108	positive	MGI_C57BL6J_2153023	Nasp-ps1	NCBI_Gene:667099,ENSEMBL:ENSMUSG00000107484	MGI:2153023	pseudogene	nuclear autoantigenic sperm protein (histone-binding), pseudogene 1
6	gene	63.20004	63.20015	negative	MGI_C57BL6J_5451989	Gm22212	ENSEMBL:ENSMUSG00000088721	MGI:5451989	snRNA gene	predicted gene, 22212
6	gene	63.24582	63.24923	positive	MGI_C57BL6J_5826627	Gm46990	NCBI_Gene:108169203	MGI:5826627	lncRNA gene	predicted gene, 46990
6	gene	63.24849	63.25762	negative	MGI_C57BL6J_1924758	9330118I20Rik	ENSEMBL:ENSMUSG00000108242	MGI:1924758	lncRNA gene	RIKEN cDNA 9330118I20 gene
6	gene	63.25588	64.70432	positive	MGI_C57BL6J_95813	Grid2	NCBI_Gene:14804,ENSEMBL:ENSMUSG00000071424	MGI:95813	protein coding gene	glutamate receptor, ionotropic, delta 2
6	gene	63.32467	63.32844	negative	MGI_C57BL6J_5594864	Gm35705	NA	NA	lncRNA gene	predicted gene%2c 35705
6	gene	63.32467	63.32844	negative	MGI_C57BL6J_5690463	Gm44071	ENSEMBL:ENSMUSG00000107525	MGI:5690463	lncRNA gene	predicted gene, 44071
6	gene	63.63750	63.64046	positive	MGI_C57BL6J_2442993	9630021D06Rik	NA	NA	unclassified non-coding RNA gene	RIKEN cDNA 9630021D06 gene
6	pseudogene	63.78385	63.78407	negative	MGI_C57BL6J_5690467	Gm44075	ENSEMBL:ENSMUSG00000108068	MGI:5690467	pseudogene	predicted gene, 44075
6	gene	64.04043	64.04156	negative	MGI_C57BL6J_5690464	Gm44072	ENSEMBL:ENSMUSG00000107864	MGI:5690464	lncRNA gene	predicted gene, 44072
6	pseudogene	64.09208	64.09231	positive	MGI_C57BL6J_5012329	Gm20144	NCBI_Gene:102639204,ENSEMBL:ENSMUSG00000107700	MGI:5012329	pseudogene	predicted gene, 20144
6	gene	64.41365	64.41375	positive	MGI_C57BL6J_5454982	Gm25205	ENSEMBL:ENSMUSG00000064775	MGI:5454982	snRNA gene	predicted gene, 25205
6	gene	64.70432	64.72886	negative	MGI_C57BL6J_5595010	Gm35851	NCBI_Gene:102639571	MGI:5595010	lncRNA gene	predicted gene, 35851
6	gene	64.72912	64.73125	positive	MGI_C57BL6J_104654	Atoh1	NCBI_Gene:11921,ENSEMBL:ENSMUSG00000073043	MGI:104654	protein coding gene	atonal bHLH transcription factor 1
6	pseudogene	64.87845	64.87913	negative	MGI_C57BL6J_5011024	Gm18839	NCBI_Gene:100417806,ENSEMBL:ENSMUSG00000107424	MGI:5011024	pseudogene	predicted gene, 18839
6	pseudogene	64.89695	64.89944	positive	MGI_C57BL6J_1100855	Lt1	NCBI_Gene:16991	MGI:1100855	pseudogene	lurcher transcript 1
6	pseudogene	64.97852	64.97940	positive	MGI_C57BL6J_5690430	Gm44038	ENSEMBL:ENSMUSG00000107783	MGI:5690430	pseudogene	predicted gene, 44038
6	gene	64.98370	64.98716	positive	MGI_C57BL6J_2441913	C530040J15Rik	NA	NA	unclassified gene	RIKEN cDNA C530040J15 gene
6	pseudogene	64.99095	64.99151	positive	MGI_C57BL6J_3704268	Gm15534	NCBI_Gene:667115,ENSEMBL:ENSMUSG00000086176	MGI:3704268	pseudogene	predicted gene 15534
6	gene	65.04258	65.11606	positive	MGI_C57BL6J_95453	Smarcad1	NCBI_Gene:13990,ENSEMBL:ENSMUSG00000029920	MGI:95453	protein coding gene	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
6	gene	65.11729	65.14502	negative	MGI_C57BL6J_1859384	Hpgds	NCBI_Gene:54486,ENSEMBL:ENSMUSG00000029919	MGI:1859384	protein coding gene	hematopoietic prostaglandin D synthase
6	gene	65.12241	65.12732	positive	MGI_C57BL6J_5595065	Gm35906	NCBI_Gene:102639643	MGI:5595065	lncRNA gene	predicted gene, 35906
6	pseudogene	65.12734	65.12910	positive	MGI_C57BL6J_4937974	Gm17147	NCBI_Gene:102632836,ENSEMBL:ENSMUSG00000090939	MGI:4937974	pseudogene	predicted gene 17147
6	pseudogene	65.15100	65.15122	positive	MGI_C57BL6J_5690811	Gm44419	ENSEMBL:ENSMUSG00000107968	MGI:5690811	pseudogene	predicted gene, 44419
6	pseudogene	65.16916	65.16996	positive	MGI_C57BL6J_3781726	Gm3549	NCBI_Gene:100041858,ENSEMBL:ENSMUSG00000108230	MGI:3781726	pseudogene	predicted gene 3549
6	pseudogene	65.21357	65.21497	negative	MGI_C57BL6J_5690450	Gm44058	ENSEMBL:ENSMUSG00000107490	MGI:5690450	pseudogene	predicted gene, 44058
6	pseudogene	65.23271	65.23306	negative	MGI_C57BL6J_5690451	Gm44059	ENSEMBL:ENSMUSG00000108252	MGI:5690451	pseudogene	predicted gene, 44059
6	pseudogene	65.24727	65.24769	positive	MGI_C57BL6J_5012362	Gm20177	NCBI_Gene:100504330,ENSEMBL:ENSMUSG00000107609	MGI:5012362	pseudogene	predicted gene, 20177
6	pseudogene	65.27150	65.27191	negative	MGI_C57BL6J_5690452	Gm44060	ENSEMBL:ENSMUSG00000108097	MGI:5690452	pseudogene	predicted gene, 44060
6	pseudogene	65.27295	65.27414	negative	MGI_C57BL6J_5690453	Gm44061	ENSEMBL:ENSMUSG00000107630	MGI:5690453	pseudogene	predicted gene, 44061
6	pseudogene	65.32810	65.32917	positive	MGI_C57BL6J_3647865	Gm8479	NCBI_Gene:667141,ENSEMBL:ENSMUSG00000108052	MGI:3647865	pseudogene	predicted gene 8479
6	gene	65.38111	65.45815	positive	MGI_C57BL6J_2441881	Qrfprl	NCBI_Gene:243407,ENSEMBL:ENSMUSG00000029917	MGI:2441881	protein coding gene	pyroglutamylated RFamide peptide receptor like
6	pseudogene	65.41602	65.41762	positive	MGI_C57BL6J_5010901	Gm18716	NCBI_Gene:100417616,ENSEMBL:ENSMUSG00000107584	MGI:5010901	pseudogene	predicted gene, 18716
6	pseudogene	65.43205	65.43400	positive	MGI_C57BL6J_5011098	Gm18913	NCBI_Gene:100417946,ENSEMBL:ENSMUSG00000107596	MGI:5011098	pseudogene	predicted gene, 18913
6	gene	65.52531	65.63404	positive	MGI_C57BL6J_3041165	Tnip3	NCBI_Gene:414084,ENSEMBL:ENSMUSG00000044162	MGI:3041165	protein coding gene	TNFAIP3 interacting protein 3
6	gene	65.66205	65.67125	negative	MGI_C57BL6J_5595303	Gm36144	NCBI_Gene:102639953	MGI:5595303	lncRNA gene	predicted gene, 36144
6	gene	65.67159	65.71233	positive	MGI_C57BL6J_1915419	Ndnf	NCBI_Gene:68169,ENSEMBL:ENSMUSG00000049001	MGI:1915419	protein coding gene	neuron-derived neurotrophic factor
6	pseudogene	65.75794	65.75832	positive	MGI_C57BL6J_3782936	Gm15490	ENSEMBL:ENSMUSG00000082115	MGI:3782936	pseudogene	predicted gene 15490
6	gene	65.76854	65.77925	negative	MGI_C57BL6J_4439762	Gm16838	ENSEMBL:ENSMUSG00000085689	MGI:4439762	lncRNA gene	predicted gene, 16838
6	gene	65.77875	65.93762	positive	MGI_C57BL6J_1918029	Prdm5	NCBI_Gene:70779,ENSEMBL:ENSMUSG00000029913	MGI:1918029	protein coding gene	PR domain containing 5
6	gene	65.86417	65.86428	negative	MGI_C57BL6J_5453320	Gm23543	ENSEMBL:ENSMUSG00000088832	MGI:5453320	snRNA gene	predicted gene, 23543
6	pseudogene	65.88278	65.88334	positive	MGI_C57BL6J_5141910	Gm20445	ENSEMBL:ENSMUSG00000092394	MGI:5141910	pseudogene	predicted gene 20445
6	gene	65.95257	65.95401	positive	MGI_C57BL6J_1914903	4930544G11Rik	NCBI_Gene:67653,ENSEMBL:ENSMUSG00000036463	MGI:1914903	protein coding gene	RIKEN cDNA 4930544G11 gene
6	pseudogene	65.98187	65.98344	negative	MGI_C57BL6J_5690796	Gm44404	ENSEMBL:ENSMUSG00000107649	MGI:5690796	pseudogene	predicted gene, 44404
6	gene	65.98964	65.98974	negative	MGI_C57BL6J_5453402	Gm23625	ENSEMBL:ENSMUSG00000064391	MGI:5453402	snRNA gene	predicted gene, 23625
6	pseudogene	65.99563	65.99653	positive	MGI_C57BL6J_3647377	Gm5876	NCBI_Gene:545843,ENSEMBL:ENSMUSG00000108100	MGI:3647377	pseudogene	predicted gene 5876
6	gene	66.14844	66.27236	negative	MGI_C57BL6J_5595567	Gm36408	NCBI_Gene:102640309	MGI:5595567	lncRNA gene	predicted gene, 36408
6	pseudogene	66.25474	66.25821	positive	MGI_C57BL6J_5690681	Gm44289	ENSEMBL:ENSMUSG00000107695	MGI:5690681	pseudogene	predicted gene, 44289
6	pseudogene	66.26416	66.28485	positive	MGI_C57BL6J_5590679	Gm31520	NCBI_Gene:102633773,ENSEMBL:ENSMUSG00000107653	MGI:5590679	pseudogene	predicted gene, 31520
6	gene	66.31101	66.31568	negative	MGI_C57BL6J_5621709	Gm38824	NCBI_Gene:105242673	MGI:5621709	lncRNA gene	predicted gene, 38824
6	pseudogene	66.39855	66.39872	negative	MGI_C57BL6J_5690673	Gm44281	ENSEMBL:ENSMUSG00000107837	MGI:5690673	pseudogene	predicted gene, 44281
6	pseudogene	66.39875	66.39897	positive	MGI_C57BL6J_5690625	Gm44233	ENSEMBL:ENSMUSG00000107631	MGI:5690625	pseudogene	predicted gene, 44233
6	gene	66.45194	66.46648	negative	MGI_C57BL6J_1919734	2610300M13Rik	NCBI_Gene:72484,ENSEMBL:ENSMUSG00000107479	MGI:1919734	lncRNA gene	RIKEN cDNA 2610300M13 gene
6	pseudogene	66.49525	66.51654	positive	MGI_C57BL6J_5011949	Gm19764	NCBI_Gene:100503550,ENSEMBL:ENSMUSG00000107775	MGI:5011949	pseudogene	predicted gene, 19764
6	pseudogene	66.51589	66.51773	negative	MGI_C57BL6J_99709	Tpm3-rs3	NCBI_Gene:110376	MGI:99709	pseudogene	tropomyosin 3, related sequence 3
6	pseudogene	66.52701	66.52893	positive	MGI_C57BL6J_3644036	Gm6786	NCBI_Gene:627751,ENSEMBL:ENSMUSG00000108086	MGI:3644036	pseudogene	predicted gene 6786
6	gene	66.53523	66.54722	positive	MGI_C57BL6J_1860374	Mad2l1	NCBI_Gene:56150,ENSEMBL:ENSMUSG00000029910	MGI:1860374	protein coding gene	MAD2 mitotic arrest deficient-like 1
6	gene	66.55218	66.56010	negative	MGI_C57BL6J_2159451	Vmn1r32	NCBI_Gene:171188,ENSEMBL:ENSMUSG00000062905	MGI:2159451	protein coding gene	vomeronasal 1 receptor 32
6	pseudogene	66.57704	66.57856	positive	MGI_C57BL6J_3647907	Gm5307	NCBI_Gene:384398,ENSEMBL:ENSMUSG00000107710	MGI:3647907	pseudogene	predicted gene 5307
6	gene	66.61054	66.61828	negative	MGI_C57BL6J_2159450	Vmn1r33	NCBI_Gene:171187,ENSEMBL:ENSMUSG00000059375	MGI:2159450	protein coding gene	vomeronasal 1 receptor 33
6	gene	66.63594	66.64388	negative	MGI_C57BL6J_3644800	Vmn1r34	NCBI_Gene:546901,ENSEMBL:ENSMUSG00000091012	MGI:3644800	protein coding gene	vomeronasal 1 receptor 34
6	gene	66.67807	66.68591	negative	MGI_C57BL6J_2159444	Vmn1r35	NCBI_Gene:171185,ENSEMBL:ENSMUSG00000060699	MGI:2159444	protein coding gene	vomeronasal 1 receptor 35
6	pseudogene	66.71168	66.71219	positive	MGI_C57BL6J_3646483	Gm6794	NCBI_Gene:627833,ENSEMBL:ENSMUSG00000107591	MGI:3646483	pseudogene	predicted gene 6794
6	gene	66.71526	66.71917	negative	MGI_C57BL6J_2159443	Vmn1r36	NCBI_Gene:171184,ENSEMBL:ENSMUSG00000115482	MGI:2159443	protein coding gene	vomeronasal 1 receptor 36
6	gene	66.72938	66.73304	positive	MGI_C57BL6J_2159442	Vmn1r37	NCBI_Gene:171183,ENSEMBL:ENSMUSG00000115467	MGI:2159442	protein coding gene	vomeronasal 1 receptor 37
6	pseudogene	66.73397	66.73418	negative	MGI_C57BL6J_5690653	Gm44261	ENSEMBL:ENSMUSG00000107721	MGI:5690653	pseudogene	predicted gene, 44261
6	pseudogene	66.74596	66.74641	positive	MGI_C57BL6J_3782220	Gm4045	NCBI_Gene:100042816,ENSEMBL:ENSMUSG00000108231	MGI:3782220	pseudogene	predicted gene 4045
6	pseudogene	66.75228	66.76004	negative	MGI_C57BL6J_3644801	Vmn1r-ps24	NCBI_Gene:546902,ENSEMBL:ENSMUSG00000093504	MGI:3644801	pseudogene	vomeronasal 1 receptor, pseudogene 24
6	gene	66.77400	66.78263	negative	MGI_C57BL6J_2159445	Vmn1r38	NCBI_Gene:171186,ENSEMBL:ENSMUSG00000115170	MGI:2159445	protein coding gene	vomeronasal 1 receptor 38
6	gene	66.80330	66.81061	negative	MGI_C57BL6J_3644802	Vmn1r39	NCBI_Gene:546903,ENSEMBL:ENSMUSG00000093755	MGI:3644802	protein coding gene	vomeronasal 1 receptor 39
6	gene	66.84001	66.84298	negative	MGI_C57BL6J_5595769	Gm36610	NCBI_Gene:102640580	MGI:5595769	lncRNA gene	predicted gene, 36610
6	pseudogene	66.87526	66.87577	negative	MGI_C57BL6J_3642653	Gm9794	NCBI_Gene:100042008,ENSEMBL:ENSMUSG00000107176	MGI:3642653	pseudogene	predicted pseudogene 9794
6	gene	66.89465	66.89652	negative	MGI_C57BL6J_1922623	4930597O21Rik	ENSEMBL:ENSMUSG00000053442	MGI:1922623	lncRNA gene	RIKEN cDNA 4930597O21 gene
6	gene	66.89640	67.02136	positive	MGI_C57BL6J_1336171	Gng12	NCBI_Gene:14701,ENSEMBL:ENSMUSG00000036402	MGI:1336171	protein coding gene	guanine nucleotide binding protein (G protein), gamma 12
6	gene	66.98432	67.01039	negative	MGI_C57BL6J_5595975	Gm36816	NCBI_Gene:102640846,ENSEMBL:ENSMUSG00000107634	MGI:5595975	lncRNA gene	predicted gene, 36816
6	pseudogene	67.01248	67.01287	positive	MGI_C57BL6J_3783088	Gm15644	ENSEMBL:ENSMUSG00000084154	MGI:3783088	pseudogene	predicted gene 15644
6	pseudogene	67.02142	67.02448	positive	MGI_C57BL6J_5589007	Gm29848	NCBI_Gene:102631535,ENSEMBL:ENSMUSG00000107869	MGI:5589007	pseudogene	predicted gene, 29848
6	gene	67.02704	67.02718	positive	MGI_C57BL6J_5455037	Gm25260	ENSEMBL:ENSMUSG00000064987	MGI:5455037	snRNA gene	predicted gene, 25260
6	gene	67.03510	67.03746	negative	MGI_C57BL6J_107799	Gadd45a	NCBI_Gene:13197,ENSEMBL:ENSMUSG00000036390	MGI:107799	protein coding gene	growth arrest and DNA-damage-inducible 45 alpha
6	gene	67.03660	67.08065	positive	MGI_C57BL6J_2443524	E230016M11Rik	NCBI_Gene:320172,ENSEMBL:ENSMUSG00000087231	MGI:2443524	lncRNA gene	RIKEN cDNA E230016M11 gene
6	gene	67.09193	67.10326	positive	MGI_C57BL6J_5589087	Gm29928	NCBI_Gene:102631637	MGI:5589087	lncRNA gene	predicted gene, 29928
6	gene	67.11567	67.16843	positive	MGI_C57BL6J_2442501	A430010J10Rik	NCBI_Gene:319665,ENSEMBL:ENSMUSG00000097603	MGI:2442501	lncRNA gene	RIKEN cDNA A430010J10 gene
6	gene	67.17868	67.23971	negative	MGI_C57BL6J_5621710	Gm38825	NCBI_Gene:105242674,ENSEMBL:ENSMUSG00000107799	MGI:5621710	lncRNA gene	predicted gene, 38825
6	pseudogene	67.20552	67.20617	positive	MGI_C57BL6J_3647296	Gm8566	NCBI_Gene:667310,ENSEMBL:ENSMUSG00000047905	MGI:3647296	pseudogene	predicted pseudogene 8566
6	pseudogene	67.22190	67.22254	negative	MGI_C57BL6J_5690444	Gm44052	ENSEMBL:ENSMUSG00000108013	MGI:5690444	pseudogene	predicted gene, 44052
6	gene	67.23818	67.29774	positive	MGI_C57BL6J_1914120	Serbp1	NCBI_Gene:66870,ENSEMBL:ENSMUSG00000036371	MGI:1914120	protein coding gene	serpine1 mRNA binding protein 1
6	pseudogene	67.25203	67.25293	negative	MGI_C57BL6J_5690442	Gm44050	ENSEMBL:ENSMUSG00000108292	MGI:5690442	pseudogene	predicted gene, 44050
6	gene	67.29132	67.37629	negative	MGI_C57BL6J_1270861	Il12rb2	NCBI_Gene:16162,ENSEMBL:ENSMUSG00000018341	MGI:1270861	protein coding gene	interleukin 12 receptor, beta 2
6	pseudogene	67.38442	67.38534	negative	MGI_C57BL6J_3643884	Gm8574	NCBI_Gene:667324,ENSEMBL:ENSMUSG00000107907	MGI:3643884	pseudogene	predicted gene 8574
6	pseudogene	67.40649	67.40691	negative	MGI_C57BL6J_5690600	Gm44208	ENSEMBL:ENSMUSG00000108000	MGI:5690600	pseudogene	predicted gene, 44208
6	pseudogene	67.41443	67.41501	negative	MGI_C57BL6J_3648855	Gm4761	NCBI_Gene:209589,ENSEMBL:ENSMUSG00000096086	MGI:3648855	pseudogene	predicted gene 4761
6	pseudogene	67.41767	67.41805	negative	MGI_C57BL6J_5690475	Gm44083	NCBI_Gene:108169191,ENSEMBL:ENSMUSG00000107508	MGI:5690475	pseudogene	predicted gene, 44083
6	gene	67.42293	67.49186	negative	MGI_C57BL6J_2181693	Il23r	NCBI_Gene:209590,ENSEMBL:ENSMUSG00000049093	MGI:2181693	protein coding gene	interleukin 23 receptor
6	gene	67.53249	67.55620	positive	MGI_C57BL6J_5663026	Gm42889	ENSEMBL:ENSMUSG00000105650	MGI:5663026	lncRNA gene	predicted gene 42889
6	gene	67.53406	67.53582	negative	MGI_C57BL6J_1861606	Tacstd2	NCBI_Gene:56753,ENSEMBL:ENSMUSG00000051397	MGI:1861606	protein coding gene	tumor-associated calcium signal transducer 2
6	gene	67.55550	67.55622	positive	MGI_C57BL6J_4439879	Igkv2-137	NCBI_Gene:692187,ENSEMBL:ENSMUSG00000076501	MGI:4439879	gene segment	immunoglobulin kappa chain variable 2-137
6	pseudogene	67.56519	67.56645	negative	MGI_C57BL6J_1922320	4930515G16Rik	NCBI_Gene:75070,ENSEMBL:ENSMUSG00000104819	MGI:1922320	pseudogene	RIKEN cDNA 4930515G16 gene
6	pseudogene	67.59388	67.59431	positive	MGI_C57BL6J_4947614	Igkv1-136	NCBI_Gene:692186,ENSEMBL:ENSMUSG00000104931	MGI:4947614	pseudogenic gene segment	immunoglobulin kappa chain variable 1-136
6	gene	67.60971	67.61051	positive	MGI_C57BL6J_3819952	Igkv1-135	NCBI_Gene:243420,ENSEMBL:ENSMUSG00000096336	MGI:3819952	gene segment	immunoglobulin kappa variable 1-135
6	pseudogene	67.63290	67.63414	negative	MGI_C57BL6J_3780132	Gm9728	NCBI_Gene:723992,ENSEMBL:ENSMUSG00000106248	MGI:3780132	pseudogene	predicted gene 9728
6	pseudogene	67.64150	67.64170	negative	MGI_C57BL6J_3648164	Rpl18a-ps2	NCBI_Gene:628006,ENSEMBL:ENSMUSG00000105464	MGI:3648164	pseudogene	ribosomal protein L18A, pseudogene 2
6	pseudogene	67.71117	67.71163	negative	MGI_C57BL6J_5009883	Igkv14-134-1	NCBI_Gene:692185,ENSEMBL:ENSMUSG00000104883	MGI:5009883	pseudogenic gene segment	immunoglobulin kappa chain variable 14-134-1
6	gene	67.71774	67.72144	negative	MGI_C57BL6J_5621458	Gm38573	NCBI_Gene:102641749	MGI:5621458	lncRNA gene	predicted gene, 38573
6	pseudogene	67.72073	67.72123	negative	MGI_C57BL6J_4936953	Igkv17-134	NCBI_Gene:692184,ENSEMBL:ENSMUSG00000091268	MGI:4936953	pseudogenic gene segment	immunoglobulin kappa chain variable 17-134
6	gene	67.72490	67.72566	positive	MGI_C57BL6J_3648380	Igkv1-133	NCBI_Gene:628027,ENSEMBL:ENSMUSG00000094491	MGI:3648380	gene segment	immunoglobulin kappa variable 1-133
6	pseudogene	67.73407	67.73560	negative	MGI_C57BL6J_3646418	Gm5308	NCBI_Gene:384401,ENSEMBL:ENSMUSG00000104843	MGI:3646418	pseudogene	predicted gene 5308
6	pseudogene	67.74852	67.74873	negative	MGI_C57BL6J_3648591	Rpl18a-ps3	NCBI_Gene:628042,ENSEMBL:ENSMUSG00000104584	MGI:3648591	pseudogene	ribosomal protein L18A, pseudogene 3
6	pseudogene	67.75475	67.75500	positive	MGI_C57BL6J_5663421	Gm43284	ENSEMBL:ENSMUSG00000106401	MGI:5663421	pseudogenic gene segment	predicted gene 43284
6	gene	67.75970	67.76041	positive	MGI_C57BL6J_3648800	Igkv1-132	NCBI_Gene:243423,ENSEMBL:ENSMUSG00000096580	MGI:3648800	gene segment	immunoglobulin kappa variable 1-132
6	gene	67.76604	67.76677	negative	MGI_C57BL6J_3645551	Igkv1-131	NCBI_Gene:628056,ENSEMBL:ENSMUSG00000076505	MGI:3645551	gene segment	immunoglobulin kappa variable 1-131
6	pseudogene	67.77825	67.77933	negative	MGI_C57BL6J_5011165	Gm18980	NCBI_Gene:100418068,ENSEMBL:ENSMUSG00000104744	MGI:5011165	pseudogene	predicted gene, 18980
6	gene	67.79105	67.79151	positive	MGI_C57BL6J_3645770	Igkv14-130	NCBI_Gene:628072,ENSEMBL:ENSMUSG00000096461	MGI:3645770	gene segment	immunoglobulin kappa variable 14-130
6	gene	67.79244	67.79258	negative	MGI_C57BL6J_5452202	Gm22425	ENSEMBL:ENSMUSG00000089157	MGI:5452202	snoRNA gene	predicted gene, 22425
6	gene	67.80437	67.80451	negative	MGI_C57BL6J_5454688	Gm24911	ENSEMBL:ENSMUSG00000087917	MGI:5454688	snoRNA gene	predicted gene, 24911
6	gene	67.83979	67.84027	positive	MGI_C57BL6J_3525017	Igkv9-129	NCBI_Gene:692182,ENSEMBL:ENSMUSG00000093906	MGI:3525017	gene segment	immunoglobulin kappa variable 9-129
6	pseudogene	67.84741	67.84787	positive	MGI_C57BL6J_3809196	Igkv9-128	NCBI_Gene:692181,ENSEMBL:ENSMUSG00000104742	MGI:3809196	pseudogenic gene segment	immunoglobulin kappa chain variable 9-128
6	gene	67.86115	67.86166	positive	MGI_C57BL6J_3646891	Igkv17-127	NCBI_Gene:243433,ENSEMBL:ENSMUSG00000076508	MGI:3646891	gene segment	immunoglobulin kappa variable 17-127
6	pseudogene	67.87601	67.87648	positive	MGI_C57BL6J_5009882	Igkv14-126-1	NCBI_Gene:692180,ENSEMBL:ENSMUSG00000106372	MGI:5009882	pseudogenic gene segment	immunoglobulin kappa chain variable 14-126-1
6	pseudogene	67.88070	67.88361	negative	MGI_C57BL6J_3780133	Gm9729	NCBI_Gene:723993,ENSEMBL:ENSMUSG00000105005	MGI:3780133	pseudogene	predicted gene 9729
6	pseudogene	67.89617	67.89664	positive	MGI_C57BL6J_3643131	Igkv14-126	NCBI_Gene:628127,ENSEMBL:ENSMUSG00000094345	MGI:3643131	pseudogenic gene segment	immunoglobulin kappa variable 14-126
6	gene	67.89706	67.89720	negative	MGI_C57BL6J_5455687	Gm25910	ENSEMBL:ENSMUSG00000088245	MGI:5455687	snoRNA gene	predicted gene, 25910
6	gene	67.91357	67.91405	positive	MGI_C57BL6J_3642338	Igkv11-125	NCBI_Gene:243428,ENSEMBL:ENSMUSG00000095737	MGI:3642338	gene segment	immunoglobulin kappa variable 11-125
6	gene	67.94207	67.94254	negative	MGI_C57BL6J_3646892	Igkv9-124	NCBI_Gene:243431,ENSEMBL:ENSMUSG00000096632	MGI:3646892	gene segment	immunoglobulin kappa chain variable 9-124
6	gene	67.95423	67.95471	negative	MGI_C57BL6J_3643848	Igkv9-123	NCBI_Gene:628144,ENSEMBL:ENSMUSG00000076512	MGI:3643848	gene segment	immunoglobulin kappa variable 9-123
6	gene	68.01672	68.01749	positive	MGI_C57BL6J_4439722	Igkv1-122	NCBI_Gene:434024,ENSEMBL:ENSMUSG00000095497	MGI:4439722	gene segment	immunoglobulin kappa chain variable 1-122
6	gene	68.03681	68.03732	positive	MGI_C57BL6J_3647671	Igkv17-121	NCBI_Gene:667435,ENSEMBL:ENSMUSG00000076514	MGI:3647671	gene segment	immunoglobulin kappa variable 17-121
6	gene	68.04998	68.05046	positive	MGI_C57BL6J_3647784	Igkv9-120	NCBI_Gene:434025,ENSEMBL:ENSMUSG00000094872	MGI:3647784	gene segment	immunoglobulin kappa chain variable 9-120
6	pseudogene	68.05634	68.05681	positive	MGI_C57BL6J_5009881	Igkv9-119	NCBI_Gene:692177,ENSEMBL:ENSMUSG00000104575	MGI:5009881	pseudogenic gene segment	immunoglobulin kappa chain variable 9-119
6	pseudogene	68.06637	68.06683	positive	MGI_C57BL6J_5009880	Igkv14-118-2	NCBI_Gene:692176,ENSEMBL:ENSMUSG00000106098	MGI:5009880	pseudogenic gene segment	immunoglobulin kappa chain variable 14-118-2
6	pseudogene	68.08255	68.08315	positive	MGI_C57BL6J_5009879	Igkv14-118-1	NCBI_Gene:692175,ENSEMBL:ENSMUSG00000106480	MGI:5009879	pseudogenic gene segment	immunoglobulin kappa chain variable 14-118-1
6	pseudogene	68.10057	68.10097	positive	MGI_C57BL6J_5663876	Gm43739	ENSEMBL:ENSMUSG00000104532	MGI:5663876	pseudogenic gene segment	predicted gene 43739
6	pseudogene	68.10279	68.10347	negative	MGI_C57BL6J_3646419	Gm5309	NCBI_Gene:384405,ENSEMBL:ENSMUSG00000106331	MGI:3646419	pseudogene	predicted gene 5309
6	pseudogene	68.10541	68.10588	positive	MGI_C57BL6J_5009878	Igkv11-118	NCBI_Gene:692174,ENSEMBL:ENSMUSG00000104934	MGI:5009878	pseudogenic gene segment	immunoglobulin kappa chain variable 11-118
6	gene	68.12105	68.12183	positive	MGI_C57BL6J_4439721	Igkv1-117	NCBI_Gene:16098,ENSEMBL:ENSMUSG00000094335	MGI:4439721	gene segment	immunoglobulin kappa variable 1-117
6	pseudogene	68.14640	68.14669	negative	MGI_C57BL6J_5663308	Gm43171	ENSEMBL:ENSMUSG00000105306	MGI:5663308	pseudogene	predicted gene 43171
6	pseudogene	68.14712	68.14785	positive	MGI_C57BL6J_5663307	Gm43170	ENSEMBL:ENSMUSG00000105007	MGI:5663307	pseudogene	predicted gene 43170
6	pseudogene	68.15188	68.15262	positive	MGI_C57BL6J_3647785	Igkv2-116	NCBI_Gene:434026,ENSEMBL:ENSMUSG00000106630	MGI:3647785	pseudogenic gene segment	immunoglobulin kappa variable 2-116
6	pseudogene	68.16080	68.16172	positive	MGI_C57BL6J_3644873	Igkv1-115	NCBI_Gene:628206,ENSEMBL:ENSMUSG00000091800	MGI:3644873	pseudogenic gene segment	immunoglobulin kappa variable 1-115
6	pseudogene	68.16446	68.16492	positive	MGI_C57BL6J_5009877	Igkv11-114	NCBI_Gene:692173,ENSEMBL:ENSMUSG00000105363	MGI:5009877	pseudogenic gene segment	immunoglobulin kappa chain variable
6	pseudogene	68.17880	68.17956	positive	MGI_C57BL6J_5009876	Igkv2-113	NCBI_Gene:692172,ENSEMBL:ENSMUSG00000105463	MGI:5009876	pseudogenic gene segment	immunoglobulin kappa chain variable 2-113
6	pseudogene	68.21093	68.21537	negative	MGI_C57BL6J_3648522	Gm4873	NCBI_Gene:232047,ENSEMBL:ENSMUSG00000105163	MGI:3648522	pseudogene	predicted gene 4873
6	gene	68.21998	68.22071	positive	MGI_C57BL6J_3644894	Igkv2-112	NCBI_Gene:381776,ENSEMBL:ENSMUSG00000076518	MGI:3644894	gene segment	immunoglobulin kappa variable 2-112
6	gene	68.25639	68.25687	positive	MGI_C57BL6J_4439863	Igkv14-111	NCBI_Gene:545847,ENSEMBL:ENSMUSG00000095771	MGI:4439863	gene segment	immunoglobulin kappa variable 14-111
6	gene	68.25739	68.25754	negative	MGI_C57BL6J_5455213	Gm25436	ENSEMBL:ENSMUSG00000088900	MGI:5455213	snoRNA gene	predicted gene, 25436
6	gene	68.27048	68.27127	positive	MGI_C57BL6J_4439558	Igkv1-110	NCBI_Gene:381777,ENSEMBL:ENSMUSG00000093861	MGI:4439558	gene segment	immunoglobulin kappa variable 1-110
6	pseudogene	68.29700	68.29729	negative	MGI_C57BL6J_5663144	Gm43007	ENSEMBL:ENSMUSG00000104722	MGI:5663144	pseudogene	predicted gene 43007
6	pseudogene	68.29776	68.29849	positive	MGI_C57BL6J_5662749	Gm42612	ENSEMBL:ENSMUSG00000105684	MGI:5662749	pseudogene	predicted gene 42612
6	gene	68.30243	68.30316	positive	MGI_C57BL6J_3642626	Igkv2-109	NCBI_Gene:628268,ENSEMBL:ENSMUSG00000105606	MGI:3642626	gene segment	immunoglobulin kappa variable 2-109
6	pseudogene	68.31205	68.31236	positive	MGI_C57BL6J_3644576	Igkv1-108	NCBI_Gene:628272,ENSEMBL:ENSMUSG00000105043	MGI:3644576	pseudogenic gene segment	immunoglobulin kappa variable 1-108
6	pseudogene	68.32610	68.32675	positive	MGI_C57BL6J_3645630	Igkv2-107	NCBI_Gene:628283,ENSEMBL:ENSMUSG00000106494	MGI:3645630	pseudogenic gene segment	immunoglobulin kappa variable 2-107
6	pseudogene	68.33953	68.34000	positive	MGI_C57BL6J_3648899	Igkv11-106	NCBI_Gene:628293,ENSEMBL:ENSMUSG00000076530	MGI:3648899	pseudogenic gene segment	immunoglobulin kappa variable 11-106
6	pseudogene	68.34865	68.34944	positive	MGI_C57BL6J_5009874	Igkv2-105	NCBI_Gene:692170,ENSEMBL:ENSMUSG00000106066	MGI:5009874	pseudogenic gene segment	immunoglobulin kappa chain variable 2-105
6	pseudogene	68.38634	68.38919	negative	MGI_C57BL6J_3646417	Gm5310	NCBI_Gene:384408,ENSEMBL:ENSMUSG00000105248	MGI:3646417	pseudogene	predicted gene 5310
6	gene	68.42557	68.42607	positive	MGI_C57BL6J_2685913	Igkv16-104	NCBI_Gene:381778,ENSEMBL:ENSMUSG00000076522	MGI:2685913	gene segment	immunoglobulin kappa variable 16-104
6	gene	68.43744	68.43793	positive	MGI_C57BL6J_96513	Igkv15-103	NCBI_Gene:692169,ENSEMBL:ENSMUSG00000076523	MGI:96513	gene segment	immunoglobulin kappa chain variable 15-103
6	pseudogene	68.46613	68.46659	negative	MGI_C57BL6J_5009875	Igkv15-102	NCBI_Gene:692171,ENSEMBL:ENSMUSG00000104832	MGI:5009875	pseudogenic gene segment	immunoglobulin kappa chain variable 15-102
6	gene	68.47461	68.47510	positive	MGI_C57BL6J_5009884	Igkv20-101-2	NCBI_Gene:724035,ENSEMBL:ENSMUSG00000106403	MGI:5009884	gene segment	immunoglobulin kappa chain variable 20-101-2
6	pseudogene	68.47908	68.47957	positive	MGI_C57BL6J_5009872	Igkv15-101-1	NCBI_Gene:692167,ENSEMBL:ENSMUSG00000106187	MGI:5009872	pseudogenic gene segment	immunoglobulin kappa chain variable 15-101-1
6	pseudogene	68.48142	68.48172	negative	MGI_C57BL6J_5009873	Igkv15-101	NCBI_Gene:692168,ENSEMBL:ENSMUSG00000105319	MGI:5009873	pseudogenic gene segment	immunoglobulin kappa chain variable 15-101
6	gene	68.51901	68.51948	positive	MGI_C57BL6J_4439559	Igkv14-100	NCBI_Gene:243439,ENSEMBL:ENSMUSG00000096515	MGI:4439559	gene segment	immunoglobulin kappa chain variable 14-100
6	gene	68.53274	68.53288	positive	MGI_C57BL6J_5455610	Gm25833	ENSEMBL:ENSMUSG00000077325	MGI:5455610	snoRNA gene	predicted gene, 25833
6	gene	68.54164	68.54242	positive	MGI_C57BL6J_4439724	Igkv1-99	NCBI_Gene:434028,ENSEMBL:ENSMUSG00000076525	MGI:4439724	gene segment	immunoglobulin kappa variable 1-99
6	gene	68.57076	68.57124	positive	MGI_C57BL6J_4439560	Igkv12-98	NCBI_Gene:435900,ENSEMBL:ENSMUSG00000076526	MGI:4439560	gene segment	immunoglobulin kappa variable 12-98
6	pseudogene	68.59137	68.59183	positive	MGI_C57BL6J_5009871	Igkv15-97	NCBI_Gene:692166,ENSEMBL:ENSMUSG00000105817	MGI:5009871	pseudogenic gene segment	immunoglobulin kappa chain variable 15-97
6	gene	68.63196	68.63244	negative	MGI_C57BL6J_4439561	Igkv10-96	NCBI_Gene:692165,ENSEMBL:ENSMUSG00000094420	MGI:4439561	gene segment	immunoglobulin kappa variable 10-96
6	pseudogene	68.64741	68.64853	negative	MGI_C57BL6J_4937167	Igkv2-95-2	NCBI_Gene:692164,ENSEMBL:ENSMUSG00000090781	MGI:4937167	pseudogenic gene segment	immunoglobulin kappa variable 2-95-2
6	pseudogene	68.67075	68.67188	positive	MGI_C57BL6J_5009870	Igkv2-95-1	NCBI_Gene:692163,ENSEMBL:ENSMUSG00000106381	MGI:5009870	pseudogenic gene segment	immunoglobulin kappa chain variable
6	gene	68.68038	68.68085	positive	MGI_C57BL6J_3644598	Igkv10-95	NCBI_Gene:434031,ENSEMBL:ENSMUSG00000094902	MGI:3644598	gene segment	immunoglobulin kappa variable 10-95
6	gene	68.70451	68.70498	negative	MGI_C57BL6J_3646140	Igkv10-94	NCBI_Gene:667550,ENSEMBL:ENSMUSG00000096490	MGI:3646140	gene segment	immunoglobulin kappa variable 10-94
6	pseudogene	68.71237	68.71351	negative	MGI_C57BL6J_5009869	Igkv2-93-1	NCBI_Gene:692162,ENSEMBL:ENSMUSG00000106318	MGI:5009869	pseudogenic gene segment	immunoglobulin kappa chain variable 2-93-1
6	pseudogene	68.73418	68.73466	negative	MGI_C57BL6J_5623299	Gm40414	ENSEMBL:ENSMUSG00000106309	MGI:5623299	pseudogene	predicted gene, 40414
6	gene	68.73630	68.73678	negative	MGI_C57BL6J_107617	Igkv19-93	NCBI_Gene:692161,ENSEMBL:ENSMUSG00000098814	MGI:107617	gene segment	immunoglobulin kappa chain variable 19-93
6	gene	68.75504	68.75559	negative	MGI_C57BL6J_2686254	Igkv4-92	NCBI_Gene:384410,ENSEMBL:ENSMUSG00000076531	MGI:2686254	gene segment	immunoglobulin kappa variable 4-92
6	pseudogene	68.76328	68.76369	negative	MGI_C57BL6J_5663062	Gm42925	ENSEMBL:ENSMUSG00000104995	MGI:5663062	pseudogenic gene segment	predicted gene 42925
6	gene	68.76856	68.76910	negative	MGI_C57BL6J_3642277	Igkv4-91	NCBI_Gene:434033,ENSEMBL:ENSMUSG00000076532	MGI:3642277	gene segment	immunoglobulin kappa chain variable 4-91
6	gene	68.79908	68.80246	positive	MGI_C57BL6J_1922585	4930549O18Rik	NA	NA	unclassified gene	RIKEN cDNA 4930549O18 gene
6	gene	68.80718	68.80771	negative	MGI_C57BL6J_4439830	Igkv4-90	NCBI_Gene:434034,ENSEMBL:ENSMUSG00000076533	MGI:4439830	gene segment	immunoglobulin kappa chain variable 4-90
6	pseudogene	68.81050	68.81054	positive	MGI_C57BL6J_5009868	Igkv13-89-1	NCBI_Gene:692155	MGI:5009868	pseudogenic gene segment	immunoglobulin kappa chain variable 13-89-1
6	pseudogene	68.81067	68.81085	positive	MGI_C57BL6J_5663061	Gm42924	ENSEMBL:ENSMUSG00000104849	MGI:5663061	pseudogenic gene segment	predicted gene 42924
6	gene	68.83485	68.83531	negative	MGI_C57BL6J_4439829	Igkv12-89	NCBI_Gene:384411,ENSEMBL:ENSMUSG00000076534	MGI:4439829	gene segment	immunoglobulin kappa chain variable 12-89
6	gene	68.86226	68.86303	negative	MGI_C57BL6J_4439828	Igkv1-88	NCBI_Gene:692154,ENSEMBL:ENSMUSG00000076535	MGI:4439828	gene segment	immunoglobulin kappa chain variable 1-88
6	pseudogene	68.87543	68.87582	negative	MGI_C57BL6J_5662676	Gm42539	ENSEMBL:ENSMUSG00000106124	MGI:5662676	pseudogenic gene segment	predicted gene 42539
6	gene	68.88018	68.88067	negative	MGI_C57BL6J_5662680	Gm42543	ENSEMBL:ENSMUSG00000105630	MGI:5662680	gene segment	predicted gene 42543
6	pseudogene	68.89358	68.89398	negative	MGI_C57BL6J_5662679	Gm42542	ENSEMBL:ENSMUSG00000105267	MGI:5662679	pseudogenic gene segment	predicted gene 42542
6	pseudogene	68.90280	68.90327	positive	MGI_C57BL6J_3779399	Igkv13-87	NCBI_Gene:692153,ENSEMBL:ENSMUSG00000079544	MGI:3779399	pseudogenic gene segment	immunoglobulin kappa variable 13-87
6	pseudogene	68.90941	68.90986	positive	MGI_C57BL6J_5663847	Gm43710	ENSEMBL:ENSMUSG00000104838	MGI:5663847	pseudogene	predicted gene 43710
6	gene	68.91041	68.91097	negative	MGI_C57BL6J_2685305	Igkv4-86	NCBI_Gene:243451,ENSEMBL:ENSMUSG00000076536	MGI:2685305	gene segment	immunoglobulin kappa variable 4-86
6	gene	68.93027	68.93073	negative	MGI_C57BL6J_4439827	Igkv13-85	NCBI_Gene:434036,ENSEMBL:ENSMUSG00000079543	MGI:4439827	gene segment	immunoglobulin kappa chain variable 13-85
6	gene	68.93960	68.94007	positive	MGI_C57BL6J_96514	Igkv13-84	NCBI_Gene:692152,ENSEMBL:ENSMUSG00000076538	MGI:96514	gene segment	immunoglobulin kappa chain variable 13-84
6	pseudogene	68.96138	68.96202	negative	MGI_C57BL6J_5009867	Igkv4-83	NCBI_Gene:692145,ENSEMBL:ENSMUSG00000076557	MGI:5009867	pseudogenic gene segment	immunoglobulin kappa chain variable 4-83
6	pseudogene	68.97920	68.97966	positive	MGI_C57BL6J_5009866	Igkv13-82	NCBI_Gene:692144,ENSEMBL:ENSMUSG00000105752	MGI:5009866	pseudogenic gene segment	immunoglobulin kappa chain variable 13-82
6	gene	68.99076	68.99129	negative	MGI_C57BL6J_2685306	Igkv4-81	NCBI_Gene:243453,ENSEMBL:ENSMUSG00000076539	MGI:2685306	gene segment	immunoglobulin kappa variable 4-81
6	pseudogene	69.00914	69.00951	positive	MGI_C57BL6J_5009865	Igkv13-80-1	NCBI_Gene:692143,ENSEMBL:ENSMUSG00000105539	MGI:5009865	pseudogenic gene segment	immunoglobulin kappa chain variable 13-80-1
6	gene	69.01656	69.01708	negative	MGI_C57BL6J_4439653	Igkv4-80	NCBI_Gene:545848,ENSEMBL:ENSMUSG00000076540	MGI:4439653	gene segment	immunoglobulin kappa variable 4-80
6	gene	69.04297	69.04350	negative	MGI_C57BL6J_2685040	Igkv4-79	NCBI_Gene:213684,ENSEMBL:ENSMUSG00000076541	MGI:2685040	gene segment	immunoglobulin kappa variable 4-79
6	pseudogene	69.05144	69.05182	positive	MGI_C57BL6J_3647961	Igkv13-78-1	NCBI_Gene:628498,ENSEMBL:ENSMUSG00000105480	MGI:3647961	pseudogenic gene segment	immunoglobulin kappa variable 13-78-1
6	gene	69.05969	69.06022	negative	MGI_C57BL6J_3819775	Igkv4-78	NCBI_Gene:545849,ENSEMBL:ENSMUSG00000094315	MGI:3819775	gene segment	immunoglobulin kappa variable 4-78
6	pseudogene	69.08619	69.08649	positive	MGI_C57BL6J_5663720	Gm43583	ENSEMBL:ENSMUSG00000105313	MGI:5663720	pseudogenic gene segment	predicted gene 43583
6	pseudogene	69.11090	69.11143	negative	MGI_C57BL6J_3647937	Igkv4-77	NCBI_Gene:667621,ENSEMBL:ENSMUSG00000105462	MGI:3647937	pseudogenic gene segment	immunoglobulin kappa variable 4-77
6	pseudogene	69.13787	69.13833	positive	MGI_C57BL6J_5009864	Igkv13-76	NCBI_Gene:692142,ENSEMBL:ENSMUSG00000104609	MGI:5009864	pseudogenic gene segment	immunoglobulin kappa chain variable 13-76
6	pseudogene	69.15612	69.15666	negative	MGI_C57BL6J_5009863	Igkv4-75	NCBI_Gene:692141,ENSEMBL:ENSMUSG00000104712	MGI:5009863	pseudogenic gene segment	immunoglobulin kappa chain variable 4-75
6	pseudogene	69.17742	69.17779	positive	MGI_C57BL6J_5009862	Igkv13-74-1	NCBI_Gene:692140,ENSEMBL:ENSMUSG00000104922	MGI:5009862	pseudogenic gene segment	immunoglobulin kappa chain variable 13-74-1
6	gene	69.18483	69.18540	negative	MGI_C57BL6J_3779447	Igkv4-74	NCBI_Gene:236047,ENSEMBL:ENSMUSG00000076543	MGI:3779447	gene segment	immunoglobulin kappa variable 4-74
6	pseudogene	69.19007	69.19028	positive	MGI_C57BL6J_5009861	Igkv13-73-1	NCBI_Gene:692139,ENSEMBL:ENSMUSG00000105989	MGI:5009861	pseudogenic gene segment	immunoglobulin kappa chain variable 13-73-1
6	gene	69.19758	69.19812	negative	MGI_C57BL6J_3645825	Igkv4-73	NCBI_Gene:628516,ENSEMBL:ENSMUSG00000106387	MGI:3645825	gene segment	immunoglobulin kappa variable 4-73
6	gene	69.22685	69.22743	negative	MGI_C57BL6J_2686345	Igkv4-72	NCBI_Gene:385109,ENSEMBL:ENSMUSG00000076545	MGI:2686345	gene segment	immunoglobulin kappa chain variable 4-72
6	pseudogene	69.23576	69.23616	positive	MGI_C57BL6J_5009860	Igkv13-71-1	NCBI_Gene:692138,ENSEMBL:ENSMUSG00000105968	MGI:5009860	pseudogenic gene segment	immunoglobulin kappa chain variable 13-71-1
6	gene	69.24316	69.24369	negative	MGI_C57BL6J_4439654	Igkv4-71	NCBI_Gene:434586,ENSEMBL:ENSMUSG00000073028	MGI:4439654	gene segment	immunoglobulin kappa chain variable 4-71
6	gene	69.26789	69.26844	negative	MGI_C57BL6J_2686348	Igkv4-70	NCBI_Gene:385120,ENSEMBL:ENSMUSG00000076547	MGI:2686348	gene segment	immunoglobulin kappa chain variable 4-70
6	gene	69.28379	69.28432	negative	MGI_C57BL6J_3648668	Igkv4-69	NCBI_Gene:628541,ENSEMBL:ENSMUSG00000076548	MGI:3648668	gene segment	immunoglobulin kappa variable 4-69
6	gene	69.30483	69.30540	negative	MGI_C57BL6J_2686265	Igkv4-68	NCBI_Gene:384515,ENSEMBL:ENSMUSG00000076549	MGI:2686265	gene segment	immunoglobulin kappa variable 4-68
6	pseudogene	69.32418	69.32465	negative	MGI_C57BL6J_3645399	Igkv12-67	NCBI_Gene:628551,ENSEMBL:ENSMUSG00000104697	MGI:3645399	pseudogenic gene segment	immunoglobulin kappa chain variable 12-67
6	gene	69.32684	69.32717	negative	MGI_C57BL6J_105105	Rprl1	NCBI_Gene:19783,ENSEMBL:ENSMUSG00000088675,ENSEMBL:ENSMUSG00000106222	MGI:105105	RNase P RNA gene	ribonuclease P RNA-like 1
6	pseudogene	69.33460	69.33508	negative	MGI_C57BL6J_5009859	Igkv12-66	NCBI_Gene:692133,ENSEMBL:ENSMUSG00000105110	MGI:5009859	pseudogenic gene segment	immunoglobulin kappa chain variable 12-66
6	pseudogene	69.34247	69.34300	negative	MGI_C57BL6J_3644339	Igkv4-65	NCBI_Gene:667670,ENSEMBL:ENSMUSG00000105883	MGI:3644339	pseudogenic gene segment	immunoglobulin kappa chain variable 4-65
6	pseudogene	69.36272	69.36319	positive	MGI_C57BL6J_5009834	Igkv13-64	NCBI_Gene:628564,ENSEMBL:ENSMUSG00000105747	MGI:5009834	pseudogenic gene segment	immunoglobulin kappa chain variable 13-64
6	gene	69.37794	69.37847	negative	MGI_C57BL6J_3645235	Igkv4-63	NCBI_Gene:628571,ENSEMBL:ENSMUSG00000076550	MGI:3645235	gene segment	immunoglobulin kappa variable 4-63
6	pseudogene	69.39242	69.39287	positive	MGI_C57BL6J_5009858	Igkv13-62-1	NCBI_Gene:692119,ENSEMBL:ENSMUSG00000105323	MGI:5009858	pseudogenic gene segment	immunoglobulin kappa chain variable 13-62-1
6	gene	69.39981	69.40034	negative	MGI_C57BL6J_3643587	Igkv4-62	NCBI_Gene:636752,ENSEMBL:ENSMUSG00000094262	MGI:3643587	gene segment	immunoglobulin kappa variable 4-62
6	pseudogene	69.40950	69.40993	positive	MGI_C57BL6J_5009857	Igkv13-61-1	NCBI_Gene:692118,ENSEMBL:ENSMUSG00000106216	MGI:5009857	pseudogenic gene segment	immunoglobulin kappa chain variable 13-61-1
6	gene	69.41689	69.41746	negative	MGI_C57BL6J_4439819	Igkv4-61	NCBI_Gene:546244,ENSEMBL:ENSMUSG00000076552	MGI:4439819	gene segment	immunoglobulin kappa chain variable 4-61
6	gene	69.43822	69.43876	negative	MGI_C57BL6J_3646808	Igkv4-59	NCBI_Gene:667683,ENSEMBL:ENSMUSG00000094006	MGI:3646808	gene segment	immunoglobulin kappa variable 4-59
6	gene	69.46319	69.46372	negative	MGI_C57BL6J_3708737	Igkv4-60	NCBI_Gene:385277,ENSEMBL:ENSMUSG00000104679	MGI:3708737	gene segment	immunoglobulin kappa variable 4-60
6	gene	69.50025	69.50079	negative	MGI_C57BL6J_2685923	Igkv4-58	NCBI_Gene:381831,ENSEMBL:ENSMUSG00000095633	MGI:2685923	gene segment	immunoglobulin kappa variable 4-58
6	gene	69.51634	69.51663	positive	MGI_C57BL6J_97956	Rn7s6	ENSEMBL:ENSMUSG00000092746	MGI:97956	SRP RNA gene	7S RNA 6
6	gene	69.51648	69.51655	positive	MGI_C57BL6J_6096173	Gm47304	ENSEMBL:ENSMUSG00000104690	MGI:6096173	miRNA gene	predicted gene, 47304
6	pseudogene	69.52355	69.52402	positive	MGI_C57BL6J_5009885	Igkv13-57-2	NCBI_Gene:724106,ENSEMBL:ENSMUSG00000104551	MGI:5009885	pseudogenic gene segment	immunoglobulin kappa variable 13-57-2
6	gene	69.54436	69.54491	negative	MGI_C57BL6J_2686264	Igkv4-57-1	NCBI_Gene:384514,ENSEMBL:ENSMUSG00000076555	MGI:2686264	gene segment	immunoglobulin kappa variable 4-57-1
6	pseudogene	69.56974	69.57016	positive	MGI_C57BL6J_5009856	Igkv13-57-1	NCBI_Gene:692114,ENSEMBL:ENSMUSG00000105369	MGI:5009856	pseudogenic gene segment	immunoglobulin kappa chain variable 13-57-1
6	gene	69.57597	69.57650	negative	MGI_C57BL6J_2685035	Igkv4-57	NCBI_Gene:235952,ENSEMBL:ENSMUSG00000076556	MGI:2685035	gene segment	immunoglobulin kappa variable 4-57
6	pseudogene	69.58124	69.58145	positive	MGI_C57BL6J_5009855	Igkv13-56-1	NCBI_Gene:692113,ENSEMBL:ENSMUSG00000106546	MGI:5009855	pseudogenic gene segment	immunoglobulin kappa chain variable 13-56-1
6	pseudogene	69.58729	69.58781	negative	MGI_C57BL6J_4439916	Igkv4-56	NCBI_Gene:619743,ENSEMBL:ENSMUSG00000106016	MGI:4439916	pseudogenic gene segment	immunoglobulin kappa chain variable 4-56
6	pseudogene	69.59989	69.60032	positive	MGI_C57BL6J_5009854	Igkv13-55-1	NCBI_Gene:692112,ENSEMBL:ENSMUSG00000106213	MGI:5009854	pseudogenic gene segment	immunoglobulin kappa chain variable 13-55-1
6	gene	69.60728	69.60783	negative	MGI_C57BL6J_2686370	Igkv4-55	NCBI_Gene:385253,ENSEMBL:ENSMUSG00000096833	MGI:2686370	gene segment	immunoglobulin kappa variable 4-55
6	pseudogene	69.61705	69.61748	positive	MGI_C57BL6J_5009853	Igkv13-54-1	NCBI_Gene:692105,ENSEMBL:ENSMUSG00000105301	MGI:5009853	pseudogenic gene segment	immunoglobulin kappa chain variable 13-54-1
6	gene	69.63165	69.63218	negative	MGI_C57BL6J_5009821	Igkv4-54	NCBI_Gene:385291,ENSEMBL:ENSMUSG00000094319	MGI:5009821	gene segment	immunoglobulin kappa chain variable 4-54
6	gene	69.64882	69.64936	negative	MGI_C57BL6J_2686266	Igkv4-53	NCBI_Gene:546213,ENSEMBL:ENSMUSG00000095753	MGI:2686266	gene segment	immunoglobulin kappa variable 4-53
6	pseudogene	69.66109	69.66147	positive	MGI_C57BL6J_5662743	Gm42606	ENSEMBL:ENSMUSG00000079542	MGI:5662743	pseudogenic gene segment	predicted gene 42606
6	gene	69.68141	69.68197	negative	MGI_C57BL6J_5009829	Igkv4-51	NCBI_Gene:619806,ENSEMBL:ENSMUSG00000094993	MGI:5009829	gene segment	immunoglobulin kappa chain variable 4-51
6	pseudogene	69.69330	69.69361	positive	MGI_C57BL6J_5663095	Gm42958	ENSEMBL:ENSMUSG00000106298	MGI:5663095	pseudogenic gene segment	predicted gene 42958
6	gene	69.70077	69.70129	negative	MGI_C57BL6J_2685915	Igkv4-50	NCBI_Gene:381782,ENSEMBL:ENSMUSG00000076562	MGI:2685915	gene segment	immunoglobulin kappa variable 4-50
6	pseudogene	69.71650	69.71696	negative	MGI_C57BL6J_5009830	Igkv12-49	NCBI_Gene:619824,ENSEMBL:ENSMUSG00000105725	MGI:5009830	pseudogenic gene segment	immunoglobulin kappa chain variable 12-49
6	gene	69.72657	69.72714	negative	MGI_C57BL6J_3642817	Igkv5-48	NCBI_Gene:619846,ENSEMBL:ENSMUSG00000076563	MGI:3642817	gene segment	immunoglobulin kappa variable 5-48
6	pseudogene	69.75085	69.75133	negative	MGI_C57BL6J_3644595	Igkv12-47	NCBI_Gene:434037,ENSEMBL:ENSMUSG00000106256	MGI:3644595	pseudogenic gene segment	immunoglobulin kappa variable 12-47
6	gene	69.76452	69.76502	negative	MGI_C57BL6J_4439773	Igkv12-46	NCBI_Gene:692245,ENSEMBL:ENSMUSG00000076564	MGI:4439773	gene segment	immunoglobulin kappa variable 12-46
6	gene	69.77575	69.77634	negative	MGI_C57BL6J_4439774	Igkv5-45	NCBI_Gene:545850,ENSEMBL:ENSMUSG00000094094	MGI:4439774	gene segment	immunoglobulin kappa chain variable 5-45
6	gene	69.81463	69.81515	negative	MGI_C57BL6J_4439775	Igkv12-44	NCBI_Gene:545851,ENSEMBL:ENSMUSG00000096422	MGI:4439775	gene segment	immunoglobulin kappa variable 12-44
6	gene	69.82336	69.82394	negative	MGI_C57BL6J_4943320	Igkv5-43	NCBI_Gene:381783,ENSEMBL:ENSMUSG00000094433	MGI:4943320	gene segment	immunoglobulin kappa chain variable 5-43
6	pseudogene	69.83479	69.83525	negative	MGI_C57BL6J_5009852	Igkv12-42	NCBI_Gene:677861,ENSEMBL:ENSMUSG00000105915	MGI:5009852	pseudogenic gene segment	immunoglobulin kappa chain variable 12-42
6	gene	69.85842	69.85888	negative	MGI_C57BL6J_4439772	Igkv12-41	NCBI_Gene:619960,ENSEMBL:ENSMUSG00000095007	MGI:4439772	gene segment	immunoglobulin kappa chain variable 12-41
6	pseudogene	69.86859	69.86919	negative	MGI_C57BL6J_5009831	Igkv5-40-1	NCBI_Gene:619974,ENSEMBL:ENSMUSG00000104533	MGI:5009831	pseudogenic gene segment	immunoglobulin kappa chain variable 5-40-1
6	pseudogene	69.87935	69.87982	negative	MGI_C57BL6J_3643951	Igkv12-40	NCBI_Gene:435904,ENSEMBL:ENSMUSG00000105955	MGI:3643951	pseudogenic gene segment	immunoglobulin kappa chain variable 12-40
6	gene	69.90042	69.90098	negative	MGI_C57BL6J_2686255	Igkv5-39	NCBI_Gene:620017,ENSEMBL:ENSMUSG00000076569	MGI:2686255	gene segment	immunoglobulin kappa variable 5-39
6	pseudogene	69.92762	69.92790	negative	MGI_C57BL6J_5663357	Gm43220	ENSEMBL:ENSMUSG00000105451	MGI:5663357	pseudogenic gene segment	predicted gene 43220
6	gene	69.94319	69.94365	negative	MGI_C57BL6J_4439614	Igkv12-38	NCBI_Gene:620050,ENSEMBL:ENSMUSG00000076570	MGI:4439614	gene segment	immunoglobulin kappa chain variable 12-38
6	gene	69.96331	69.96387	negative	MGI_C57BL6J_2686256	Igkv5-37	NCBI_Gene:384417,ENSEMBL:ENSMUSG00000076571	MGI:2686256	gene segment	immunoglobulin kappa variable 5-37
6	gene	69.99246	69.99298	negative	MGI_C57BL6J_4439613	Igkv18-36	NCBI_Gene:620088,ENSEMBL:ENSMUSG00000076572	MGI:4439613	gene segment	immunoglobulin kappa chain variable 18-36
6	gene	70.01095	70.01167	negative	MGI_C57BL6J_4439612	Igkv1-35	NCBI_Gene:620105,ENSEMBL:ENSMUSG00000076573	MGI:4439612	gene segment	immunoglobulin kappa variable 1-35
6	gene	70.02798	70.02809	negative	MGI_C57BL6J_5453471	Gm23694	ENSEMBL:ENSMUSG00000094641	MGI:5453471	miRNA gene	predicted gene, 23694
6	pseudogene	70.04034	70.04065	negative	MGI_C57BL6J_5663723	Gm43586	ENSEMBL:ENSMUSG00000106226	MGI:5663723	pseudogenic gene segment	predicted gene 43586
6	gene	70.04411	70.04468	negative	MGI_C57BL6J_4949914	Igkv8-34	NCBI_Gene:620126,ENSEMBL:ENSMUSG00000104769	MGI:4949914	gene segment	immunoglobulin kappa variable 8-34
6	gene	70.05863	70.05920	negative	MGI_C57BL6J_3577282	Igkv7-33	NCBI_Gene:243461,ENSEMBL:ENSMUSG00000076575	MGI:3577282	gene segment	immunoglobulin kappa chain variable 7-33
6	gene	70.07402	70.07460	negative	MGI_C57BL6J_3641634	Igkv6-32	NCBI_Gene:434039,ENSEMBL:ENSMUSG00000076576	MGI:3641634	gene segment	immunoglobulin kappa variable 6-32
6	pseudogene	70.10586	70.10641	negative	MGI_C57BL6J_3644798	Igkv8-31	NCBI_Gene:546905,ENSEMBL:ENSMUSG00000105781	MGI:3644798	pseudogenic gene segment	immunoglobulin kappa chain variable 8-31
6	gene	70.11706	70.11762	negative	MGI_C57BL6J_3642250	Igkv8-30	NCBI_Gene:384419,ENSEMBL:ENSMUSG00000076577	MGI:3642250	gene segment	immunoglobulin kappa chain variable 8-30
6	pseudogene	70.12965	70.13064	positive	MGI_C57BL6J_5662955	Gm42818	ENSEMBL:ENSMUSG00000106192	MGI:5662955	pseudogene	predicted gene 42818
6	pseudogene	70.13068	70.13250	positive	MGI_C57BL6J_3644437	Amd-ps2	NCBI_Gene:545852	MGI:3644437	pseudogene	S-adenosylmethionine decarboxylase, pseudogene 2
6	gene	70.13846	70.13911	negative	MGI_C57BL6J_4439616	Igkv6-29	NCBI_Gene:620191,ENSEMBL:ENSMUSG00000076578	MGI:4439616	gene segment	immunoglobulin kappa chain variable 6-29
6	gene	70.14359	70.14417	negative	MGI_C57BL6J_3642251	Igkv8-28	NCBI_Gene:434040,ENSEMBL:ENSMUSG00000094356	MGI:3642251	gene segment	immunoglobulin kappa variable 8-28
6	gene	70.14794	70.14804	negative	MGI_C57BL6J_5453873	Gm24096	ENSEMBL:ENSMUSG00000096560	MGI:5453873	miRNA gene	predicted gene, 24096
6	gene	70.17181	70.17227	negative	MGI_C57BL6J_4439868	Igkv8-27	NCBI_Gene:434041,ENSEMBL:ENSMUSG00000076580	MGI:4439868	gene segment	immunoglobulin kappa chain variable 8-27
6	gene	70.19323	70.19380	positive	MGI_C57BL6J_4439869	Igkv8-26	NCBI_Gene:620240,ENSEMBL:ENSMUSG00000076581	MGI:4439869	gene segment	immunoglobulin kappa variable 8-26
6	pseudogene	70.20953	70.21516	negative	MGI_C57BL6J_3643936	Gm8828	NCBI_Gene:667812,ENSEMBL:ENSMUSG00000105727	MGI:3643936	pseudogene	predicted gene 8828
6	gene	70.21540	70.21596	positive	MGI_C57BL6J_4439867	Igkv6-25	NCBI_Gene:381784,ENSEMBL:ENSMUSG00000094930	MGI:4439867	gene segment	immunoglobulin kappa chain variable 6-25
6	gene	70.21686	70.21742	negative	MGI_C57BL6J_4947958	Igkv8-24	NCBI_Gene:677858,ENSEMBL:ENSMUSG00000076583	MGI:4947958	gene segment	immunoglobulin kappa chain variable 8-24
6	gene	70.21885	70.22070	negative	MGI_C57BL6J_5826599	Gm46962	NCBI_Gene:108169149	MGI:5826599	lncRNA gene	predicted gene, 46962
6	gene	70.24043	70.24071	positive	MGI_C57BL6J_4947960	Igkv8-23-1	NCBI_Gene:434685	MGI:4947960	gene segment	immunoglobulin kappa variable 8-23-1
6	gene	70.24043	70.24097	negative	MGI_C57BL6J_5663355	Gm43218	ENSEMBL:ENSMUSG00000105432	MGI:5663355	gene segment	predicted gene 43218
6	gene	70.26041	70.26095	negative	MGI_C57BL6J_3711980	Igkv6-23	NCBI_Gene:637227,ENSEMBL:ENSMUSG00000095630	MGI:3711980	gene segment	immunoglobulin kappa variable 6-23
6	pseudogene	70.26195	70.26393	positive	MGI_C57BL6J_3646852	Gm8836	NCBI_Gene:667829,ENSEMBL:ENSMUSG00000106080	MGI:3646852	pseudogene	predicted gene 8836
6	pseudogene	70.29518	70.29541	positive	MGI_C57BL6J_3779291	Gm11065	ENSEMBL:ENSMUSG00000079230	MGI:3779291	pseudogene	predicted gene 11065
6	pseudogene	70.29755	70.29812	negative	MGI_C57BL6J_5009833	Igkv8-22	NCBI_Gene:620387,ENSEMBL:ENSMUSG00000105668	MGI:5009833	pseudogenic gene segment	immunoglobulin kappa chain variable 8-22
6	gene	70.31490	70.31547	negative	MGI_C57BL6J_1330840	Igkv8-21	NCBI_Gene:620400,ENSEMBL:ENSMUSG00000076586	MGI:1330840	gene segment	immunoglobulin kappa variable 8-21
6	pseudogene	70.32654	70.32989	positive	MGI_C57BL6J_3647577	Amd-ps5	NCBI_Gene:667840,ENSEMBL:ENSMUSG00000105114	MGI:3647577	pseudogene	S-adenosylmethionine decarboxylase, pseudogene 5
6	gene	70.33584	70.33651	negative	MGI_C57BL6J_1330836	Igkv6-20	NCBI_Gene:108024,ENSEMBL:ENSMUSG00000076587	MGI:1330836	gene segment	immunoglobulin kappa variable 6-20
6	gene	70.34088	70.34145	negative	MGI_C57BL6J_1330844	Igkv8-19	NCBI_Gene:232065,ENSEMBL:ENSMUSG00000096594	MGI:1330844	gene segment	immunoglobulin kappa variable 8-19
6	gene	70.35585	70.35644	positive	MGI_C57BL6J_1330845	Igkv8-18	NCBI_Gene:667859,ENSEMBL:ENSMUSG00000076589	MGI:1330845	gene segment	immunoglobulin kappa variable 8-18
6	pseudogene	70.36844	70.36980	negative	MGI_C57BL6J_3647327	Gm8848	NCBI_Gene:667863,ENSEMBL:ENSMUSG00000106031	MGI:3647327	pseudogene	predicted gene 8848
6	gene	70.37144	70.37199	positive	MGI_C57BL6J_1330833	Igkv6-17	NCBI_Gene:667865,ENSEMBL:ENSMUSG00000095794	MGI:1330833	gene segment	immunoglobulin kappa variable 6-17
6	gene	70.38667	70.38725	negative	MGI_C57BL6J_1330843	Igkv8-16	NCBI_Gene:640340,ENSEMBL:ENSMUSG00000076591	MGI:1330843	gene segment	immunoglobulin kappa variable 8-16
6	pseudogene	70.40570	70.40593	negative	MGI_C57BL6J_5662804	Gm42667	ENSEMBL:ENSMUSG00000106428	MGI:5662804	pseudogenic gene segment	predicted gene 42667
6	gene	70.40647	70.40699	negative	MGI_C57BL6J_1330831	Igkv6-15	NCBI_Gene:108022,ENSEMBL:ENSMUSG00000094797	MGI:1330831	gene segment	immunoglobulin kappa variable 6-15
6	pseudogene	70.40863	70.41001	positive	MGI_C57BL6J_3644164	Gm8853	NCBI_Gene:667872,ENSEMBL:ENSMUSG00000106624	MGI:3644164	pseudogene	predicted gene 8853
6	pseudogene	70.42416	70.42443	positive	MGI_C57BL6J_3708738	Gm10360	ENSEMBL:ENSMUSG00000072477	MGI:3708738	pseudogenic gene segment	predicted gene 10360
6	pseudogene	70.42892	70.43121	negative	MGI_C57BL6J_3779561	Gm6157	NCBI_Gene:620497,ENSEMBL:ENSMUSG00000105687	MGI:3779561	pseudogene	predicted gene 6157
6	gene	70.43495	70.43548	negative	MGI_C57BL6J_1330830	Igkv6-14	NCBI_Gene:667881,ENSEMBL:ENSMUSG00000096844	MGI:1330830	gene segment	immunoglobulin kappa variable 6-14
6	pseudogene	70.43711	70.43847	positive	MGI_C57BL6J_3648004	Gm8862	NCBI_Gene:667889,ENSEMBL:ENSMUSG00000104643	MGI:3648004	pseudogene	predicted gene 8862
6	gene	70.45750	70.45804	negative	MGI_C57BL6J_1330829	Igkv6-13	NCBI_Gene:667899,ENSEMBL:ENSMUSG00000076594	MGI:1330829	gene segment	immunoglobulin kappa variable 6-13
6	pseudogene	70.45966	70.46102	positive	MGI_C57BL6J_3645636	Gm8872	NCBI_Gene:667902,ENSEMBL:ENSMUSG00000105305	MGI:3645636	pseudogene	predicted gene 8872
6	pseudogene	70.49336	70.49366	negative	MGI_C57BL6J_5662857	Gm42720	ENSEMBL:ENSMUSG00000106315	MGI:5662857	pseudogenic gene segment	predicted gene 42720
6	pseudogene	70.49538	70.49553	positive	MGI_C57BL6J_5662910	Gm42773	ENSEMBL:ENSMUSG00000104692	MGI:5662910	pseudogene	predicted gene 42773
6	pseudogene	70.49766	70.49834	negative	MGI_C57BL6J_3645632	Igkv3-12-1	NCBI_Gene:667908,ENSEMBL:ENSMUSG00000105862	MGI:3645632	pseudogenic gene segment	immunoglobulin kappa chain variable 3-12-1
6	gene	70.51825	70.51885	positive	MGI_C57BL6J_1330815	Igkv3-12	NCBI_Gene:667914,ENSEMBL:ENSMUSG00000094117	MGI:1330815	gene segment	immunoglobulin kappa variable 3-12
6	pseudogene	70.55324	70.55444	positive	MGI_C57BL6J_1330820	Igkv3-11	NCBI_Gene:667917,ENSEMBL:ENSMUSG00000105499	MGI:1330820	pseudogenic gene segment	immunoglobulin kappa variable 3-11
6	gene	70.57263	70.57323	positive	MGI_C57BL6J_1330821	Igkv3-10	NCBI_Gene:667924,ENSEMBL:ENSMUSG00000076596	MGI:1330821	gene segment	immunoglobulin kappa variable 3-10
6	gene	70.58819	70.58878	positive	MGI_C57BL6J_1330856	Igkv3-9	NCBI_Gene:667928,ENSEMBL:ENSMUSG00000095338	MGI:1330856	gene segment	immunoglobulin kappa variable 3-9
6	pseudogene	70.58887	70.58945	positive	MGI_C57BL6J_1330857	Igkv3-8	NCBI_Gene:108010,ENSEMBL:ENSMUSG00000104760	MGI:1330857	pseudogenic gene segment	immunoglobulin kappa variable 3-8
6	gene	70.60744	70.60804	positive	MGI_C57BL6J_1330852	Igkv3-7	NCBI_Gene:108005,ENSEMBL:ENSMUSG00000076598	MGI:1330852	gene segment	immunoglobulin kappa variable 3-7
6	pseudogene	70.64240	70.64356	positive	MGI_C57BL6J_1330853	Igkv3-6	NCBI_Gene:667936,ENSEMBL:ENSMUSG00000106667	MGI:1330853	pseudogenic gene segment	immunoglobulin kappa variable 3-6
6	gene	70.66327	70.66389	positive	MGI_C57BL6J_1330854	Igkv3-5	NCBI_Gene:667940,ENSEMBL:ENSMUSG00000095335	MGI:1330854	gene segment	immunoglobulin kappa chain variable 3-5
6	gene	70.67179	70.67238	positive	MGI_C57BL6J_1330855	Igkv3-4	NCBI_Gene:626347,ENSEMBL:ENSMUSG00000096715	MGI:1330855	gene segment	immunoglobulin kappa variable 3-4
6	gene	70.68695	70.68753	positive	MGI_C57BL6J_1330849	Igkv3-3	NCBI_Gene:667946,ENSEMBL:ENSMUSG00000094478	MGI:1330849	gene segment	immunoglobulin kappa variable 3-3
6	gene	70.69845	70.69907	positive	MGI_C57BL6J_1330850	Igkv3-2	NCBI_Gene:626583,ENSEMBL:ENSMUSG00000095351	MGI:1330850	gene segment	immunoglobulin kappa variable 3-2
6	gene	70.70358	70.70418	positive	MGI_C57BL6J_1330851	Igkv3-1	NCBI_Gene:108004,ENSEMBL:ENSMUSG00000095682	MGI:1330851	gene segment	immunoglobulin kappa variable 3-1
6	gene	70.71308	70.71928	negative	MGI_C57BL6J_5826598	Gm46961	NCBI_Gene:108169148	MGI:5826598	lncRNA gene	predicted gene, 46961
6	gene	70.71907	70.75053	positive	MGI_C57BL6J_5589370	Gm30211	NCBI_Gene:102632036,ENSEMBL:ENSMUSG00000105646	MGI:5589370	lncRNA gene	predicted gene, 30211
6	gene	70.72256	70.72260	positive	MGI_C57BL6J_1316689	Igkj1	NCBI_Gene:110759,ENSEMBL:ENSMUSG00000076604	MGI:1316689	gene segment	immunoglobulin kappa joining 1
6	gene	70.72292	70.72296	positive	MGI_C57BL6J_1316690	Igkj2	NCBI_Gene:110760,ENSEMBL:ENSMUSG00000076605	MGI:1316690	gene segment	immunoglobulin kappa joining 2
6	gene	70.72322	70.72326	positive	MGI_C57BL6J_1316691	Igkj3	NCBI_Gene:110761,ENSEMBL:ENSMUSG00000076606	MGI:1316691	gene segment	immunoglobulin kappa joining 3
6	gene	70.72355	70.72358	positive	MGI_C57BL6J_1316692	Igkj4	NCBI_Gene:110762,ENSEMBL:ENSMUSG00000076607	MGI:1316692	gene segment	immunoglobulin kappa joining 4
6	gene	70.72389	70.72393	positive	MGI_C57BL6J_1316738	Igkj5	NCBI_Gene:110763,ENSEMBL:ENSMUSG00000076608	MGI:1316738	gene segment	immunoglobulin kappa joining 5
6	gene	70.72643	70.72697	positive	MGI_C57BL6J_96495	Igkc	NCBI_Gene:16071,ENSEMBL:ENSMUSG00000076609	MGI:96495	gene segment	immunoglobulin kappa constant
6	gene	70.76572	70.79223	negative	MGI_C57BL6J_103254	Rpia	NCBI_Gene:19895,ENSEMBL:ENSMUSG00000053604	MGI:103254	protein coding gene	ribose 5-phosphate isomerase A
6	gene	70.80699	70.81479	negative	MGI_C57BL6J_5589490	Gm30331	NCBI_Gene:102632191	MGI:5589490	lncRNA gene	predicted gene, 30331
6	gene	70.84448	70.90524	positive	MGI_C57BL6J_1341830	Eif2ak3	NCBI_Gene:13666,ENSEMBL:ENSMUSG00000031668	MGI:1341830	protein coding gene	eukaryotic translation initiation factor 2 alpha kinase 3
6	gene	70.85544	70.85558	positive	MGI_C57BL6J_5453123	Gm23346	ENSEMBL:ENSMUSG00000065750	MGI:5453123	snoRNA gene	predicted gene, 23346
6	gene	70.88335	70.88580	negative	MGI_C57BL6J_5663429	Gm43292	ENSEMBL:ENSMUSG00000105776	MGI:5663429	unclassified gene	predicted gene 43292
6	gene	70.91309	70.95115	negative	MGI_C57BL6J_1921471	Tex37	NCBI_Gene:74221,ENSEMBL:ENSMUSG00000051896	MGI:1921471	protein coding gene	testis expressed 37
6	gene	70.95653	70.96107	positive	MGI_C57BL6J_3511278	Foxi3	NCBI_Gene:232077,ENSEMBL:ENSMUSG00000055874	MGI:3511278	protein coding gene	forkhead box I3
6	gene	71.03958	71.03973	negative	MGI_C57BL6J_5453262	Gm23485	ENSEMBL:ENSMUSG00000077369	MGI:5453262	snRNA gene	predicted gene, 23485
6	gene	71.08778	71.10663	negative	MGI_C57BL6J_5621711	Gm38826	NCBI_Gene:105242675	MGI:5621711	lncRNA gene	predicted gene, 38826
6	gene	71.10561	71.10651	negative	MGI_C57BL6J_5690298	Gm43906	ENSEMBL:ENSMUSG00000107446	MGI:5690298	unclassified gene	predicted gene, 43906
6	pseudogene	71.12459	71.12500	positive	MGI_C57BL6J_3704270	Rpl34-ps1	NCBI_Gene:619547,ENSEMBL:ENSMUSG00000068396	MGI:3704270	pseudogene	ribosomal protein L34, pseudogene 1
6	gene	71.12817	71.14444	negative	MGI_C57BL6J_3041254	Thnsl2	NCBI_Gene:232078,ENSEMBL:ENSMUSG00000054474	MGI:3041254	protein coding gene	threonine synthase-like 2 (bacterial)
6	gene	71.14859	71.15369	positive	MGI_C57BL6J_5589550	Gm30391	NCBI_Gene:102632265	MGI:5589550	lncRNA gene	predicted gene, 30391
6	gene	71.15411	71.15797	positive	MGI_C57BL6J_5621712	Gm38827	NCBI_Gene:105242676	MGI:5621712	lncRNA gene	predicted gene, 38827
6	gene	71.16480	71.16612	positive	MGI_C57BL6J_5690819	Gm44427	ENSEMBL:ENSMUSG00000108206	MGI:5690819	lncRNA gene	predicted gene, 44427
6	gene	71.19983	71.20502	positive	MGI_C57BL6J_95479	Fabp1	NCBI_Gene:14080,ENSEMBL:ENSMUSG00000054422	MGI:95479	protein coding gene	fatty acid binding protein 1, liver
6	gene	71.21394	71.32223	negative	MGI_C57BL6J_104790	Smyd1	NCBI_Gene:12180,ENSEMBL:ENSMUSG00000055027	MGI:104790	protein coding gene	SET and MYND domain containing 1
6	gene	71.27157	71.28532	positive	MGI_C57BL6J_1889377	Krcc1	NCBI_Gene:57896,ENSEMBL:ENSMUSG00000053012	MGI:1889377	protein coding gene	lysine-rich coiled-coil 1
6	gene	71.27167	71.27180	positive	MGI_C57BL6J_5531121	Mir8112	miRBase:MI0026044,NCBI_Gene:102465900,ENSEMBL:ENSMUSG00000098623	MGI:5531121	miRNA gene	microRNA 8112
6	gene	71.27649	71.27935	positive	MGI_C57BL6J_5690713	Gm44321	ENSEMBL:ENSMUSG00000107749	MGI:5690713	unclassified gene	predicted gene, 44321
6	gene	71.29349	71.30288	positive	MGI_C57BL6J_2685916	Gm1070	NCBI_Gene:381785,ENSEMBL:ENSMUSG00000073018	MGI:2685916	lncRNA gene	predicted gene 1070
6	gene	71.31221	71.32268	negative	MGI_C57BL6J_5621713	Gm38828	NCBI_Gene:105242677	MGI:5621713	lncRNA gene	predicted gene, 38828
6	gene	71.32279	71.33749	positive	MGI_C57BL6J_88347	Cd8b1	NCBI_Gene:12526,ENSEMBL:ENSMUSG00000053044	MGI:88347	protein coding gene	CD8 antigen, beta chain 1
6	gene	71.33889	71.33953	negative	MGI_C57BL6J_5690502	Gm44110	ENSEMBL:ENSMUSG00000107855	MGI:5690502	lncRNA gene	predicted gene, 44110
6	pseudogene	71.34933	71.34973	positive	MGI_C57BL6J_5690503	Gm44111	ENSEMBL:ENSMUSG00000107959	MGI:5690503	pseudogene	predicted gene, 44111
6	gene	71.35304	71.37328	positive	MGI_C57BL6J_5690566	Gm44174	ENSEMBL:ENSMUSG00000108289	MGI:5690566	lncRNA gene	predicted gene, 44174
6	gene	71.35435	71.36083	negative	MGI_C57BL6J_5690567	Gm44175	ENSEMBL:ENSMUSG00000108132	MGI:5690567	lncRNA gene	predicted gene, 44175
6	gene	71.35715	71.36083	negative	MGI_C57BL6J_5621714	Gm38829	NA	NA	lncRNA gene	predicted gene%2c 38829
6	gene	71.37343	71.37917	positive	MGI_C57BL6J_88346	Cd8a	NCBI_Gene:12525,ENSEMBL:ENSMUSG00000053977	MGI:88346	protein coding gene	CD8 antigen, alpha chain
6	gene	71.38863	71.44064	negative	MGI_C57BL6J_1915727	Rmnd5a	NCBI_Gene:68477,ENSEMBL:ENSMUSG00000002222	MGI:1915727	protein coding gene	required for meiotic nuclear division 5 homolog A
6	gene	71.43210	71.43511	negative	MGI_C57BL6J_5690522	Gm44130	ENSEMBL:ENSMUSG00000108211	MGI:5690522	unclassified gene	predicted gene, 44130
6	gene	71.45199	71.45900	positive	MGI_C57BL6J_5690564	Gm44172	ENSEMBL:ENSMUSG00000108213	MGI:5690564	lncRNA gene	predicted gene, 44172
6	gene	71.45750	71.47915	negative	MGI_C57BL6J_5589741	Gm30582	NCBI_Gene:102632531	MGI:5589741	lncRNA gene	predicted gene, 30582
6	gene	71.46331	71.46606	negative	MGI_C57BL6J_5690578	Gm44186	ENSEMBL:ENSMUSG00000107460	MGI:5690578	unclassified gene	predicted gene, 44186
6	gene	71.49388	71.51088	positive	MGI_C57BL6J_109483	Rnf103	NCBI_Gene:22644,ENSEMBL:ENSMUSG00000052656	MGI:109483	protein coding gene	ring finger protein 103
6	gene	71.53322	71.53787	positive	MGI_C57BL6J_5621715	Gm38830	NCBI_Gene:105242679	MGI:5621715	lncRNA gene	predicted gene, 38830
6	gene	71.53851	71.54174	negative	MGI_C57BL6J_5690586	Gm44194	ENSEMBL:ENSMUSG00000108278	MGI:5690586	unclassified gene	predicted gene, 44194
6	gene	71.54319	71.54411	negative	MGI_C57BL6J_1920544	1700040L08Rik	ENSEMBL:ENSMUSG00000107406	MGI:1920544	lncRNA gene	RIKEN cDNA 1700040L08 gene
6	gene	71.54380	71.58261	positive	MGI_C57BL6J_1913950	Chmp3	NCBI_Gene:66700,ENSEMBL:ENSMUSG00000053119	MGI:1913950	protein coding gene	charged multivesicular body protein 3
6	gene	71.58897	71.63301	negative	MGI_C57BL6J_98847	Kdm3a	NCBI_Gene:104263,ENSEMBL:ENSMUSG00000053470	MGI:98847	protein coding gene	lysine (K)-specific demethylase 3A
6	pseudogene	71.64141	71.64214	negative	MGI_C57BL6J_3645395	Gm6063	NCBI_Gene:606532,ENSEMBL:ENSMUSG00000108772	MGI:3645395	pseudogene	predicted gene 6063
6	pseudogene	71.67209	71.67270	negative	MGI_C57BL6J_5753344	Gm44768	NCBI_Gene:108169193,ENSEMBL:ENSMUSG00000108496	MGI:5753344	pseudogene	predicted gene 44768
6	pseudogene	71.68327	71.68398	positive	MGI_C57BL6J_3643398	Rpl19-ps9	NCBI_Gene:668034,ENSEMBL:ENSMUSG00000108813	MGI:3643398	pseudogene	ribosomal protein L19, pseudogene 9
6	gene	71.70756	71.81071	positive	MGI_C57BL6J_1098827	Reep1	NCBI_Gene:52250,ENSEMBL:ENSMUSG00000052852	MGI:1098827	protein coding gene	receptor accessory protein 1
6	gene	71.79067	71.79348	positive	MGI_C57BL6J_5753345	Gm44769	ENSEMBL:ENSMUSG00000108802	MGI:5753345	unclassified gene	predicted gene 44769
6	gene	71.80289	71.80415	positive	MGI_C57BL6J_5753346	Gm44770	ENSEMBL:ENSMUSG00000108594	MGI:5753346	unclassified gene	predicted gene 44770
6	gene	71.81300	71.82697	negative	MGI_C57BL6J_1913473	Mrpl35	NCBI_Gene:66223,ENSEMBL:ENSMUSG00000052962	MGI:1913473	protein coding gene	mitochondrial ribosomal protein L35
6	gene	71.83109	71.83171	negative	MGI_C57BL6J_5753347	Gm44771	ENSEMBL:ENSMUSG00000108466	MGI:5753347	unclassified gene	predicted gene 44771
6	gene	71.83109	71.87739	positive	MGI_C57BL6J_1923864	Immt	NCBI_Gene:76614,ENSEMBL:ENSMUSG00000052337	MGI:1923864	protein coding gene	inner membrane protein, mitochondrial
6	pseudogene	71.86917	71.87002	negative	MGI_C57BL6J_5010010	Gm17825	NCBI_Gene:100384878,ENSEMBL:ENSMUSG00000108681	MGI:5010010	pseudogene	predicted gene, 17825
6	gene	71.88064	71.90877	negative	MGI_C57BL6J_1917206	Ptcd3	NCBI_Gene:69956,ENSEMBL:ENSMUSG00000063884	MGI:1917206	protein coding gene	pentatricopeptide repeat domain 3
6	gene	71.88256	71.88269	negative	MGI_C57BL6J_5452263	Gm22486	ENSEMBL:ENSMUSG00000080465	MGI:5452263	snoRNA gene	predicted gene, 22486
6	gene	71.90905	71.98493	positive	MGI_C57BL6J_1096397	Polr1a	NCBI_Gene:20019,ENSEMBL:ENSMUSG00000049553	MGI:1096397	protein coding gene	polymerase (RNA) I polypeptide A
6	pseudogene	71.91890	71.91984	negative	MGI_C57BL6J_5011263	Gm19078	NCBI_Gene:100418220,ENSEMBL:ENSMUSG00000108305	MGI:5011263	pseudogene	predicted gene, 19078
6	gene	71.96115	71.96377	negative	MGI_C57BL6J_5477122	Gm26628	ENSEMBL:ENSMUSG00000097133	MGI:5477122	lncRNA gene	predicted gene, 26628
6	gene	72.01390	72.04253	negative	MGI_C57BL6J_4840488	9130221F21Rik	NCBI_Gene:330350,ENSEMBL:ENSMUSG00000108356	MGI:4840488	lncRNA gene	RIKEN cDNA 9130221F21 gene
6	pseudogene	72.07305	72.07415	negative	MGI_C57BL6J_3648959	Gm8952	NCBI_Gene:668057,ENSEMBL:ENSMUSG00000108344	MGI:3648959	pseudogene	predicted gene 8952
6	pseudogene	72.08736	72.08785	negative	MGI_C57BL6J_5753180	Gm44604	ENSEMBL:ENSMUSG00000108355	MGI:5753180	pseudogene	predicted gene 44604
6	gene	72.09755	72.15457	positive	MGI_C57BL6J_1339963	St3gal5	NCBI_Gene:20454,ENSEMBL:ENSMUSG00000056091	MGI:1339963	protein coding gene	ST3 beta-galactoside alpha-2,3-sialyltransferase 5
6	gene	72.10420	72.10681	positive	MGI_C57BL6J_5580144	Gm29438	ENSEMBL:ENSMUSG00000101823	MGI:5580144	sense intronic lncRNA gene	predicted gene 29438
6	gene	72.12021	72.12320	negative	MGI_C57BL6J_1918515	4933431G14Rik	NCBI_Gene:71265,ENSEMBL:ENSMUSG00000108709	MGI:1918515	lncRNA gene	RIKEN cDNA 4933431G14 gene
6	gene	72.16235	72.16783	positive	MGI_C57BL6J_5621717	Gm38832	NCBI_Gene:105242682,ENSEMBL:ENSMUSG00000108371	MGI:5621717	lncRNA gene	predicted gene, 38832
6	gene	72.20617	72.23582	negative	MGI_C57BL6J_1918343	Atoh8	NCBI_Gene:71093,ENSEMBL:ENSMUSG00000037621	MGI:1918343	protein coding gene	atonal bHLH transcription factor 8
6	gene	72.25010	72.25499	negative	MGI_C57BL6J_5589941	Gm30782	NCBI_Gene:102632804	MGI:5589941	lncRNA gene	predicted gene, 30782
6	gene	72.30461	72.31437	positive	MGI_C57BL6J_109516	Sftpb	NCBI_Gene:20388,ENSEMBL:ENSMUSG00000056370	MGI:109516	protein coding gene	surfactant associated protein B
6	gene	72.31868	72.34521	negative	MGI_C57BL6J_107622	Usp39	NCBI_Gene:28035,ENSEMBL:ENSMUSG00000056305	MGI:107622	protein coding gene	ubiquitin specific peptidase 39
6	gene	72.34703	72.34846	negative	MGI_C57BL6J_5753627	Gm45051	ENSEMBL:ENSMUSG00000108435	MGI:5753627	lncRNA gene	predicted gene 45051
6	gene	72.34720	72.35316	positive	MGI_C57BL6J_1915614	0610030E20Rik	NCBI_Gene:68364,ENSEMBL:ENSMUSG00000058706	MGI:1915614	protein coding gene	RIKEN cDNA 0610030E20 gene
6	gene	72.35545	72.35976	positive	MGI_C57BL6J_2385244	Tmem150a	NCBI_Gene:232086,ENSEMBL:ENSMUSG00000055912	MGI:2385244	protein coding gene	transmembrane protein 150A
6	gene	72.35971	72.36697	negative	MGI_C57BL6J_1913760	Rnf181	NCBI_Gene:66510,ENSEMBL:ENSMUSG00000055850	MGI:1913760	protein coding gene	ring finger protein 181
6	gene	72.36805	72.38047	negative	MGI_C57BL6J_1858622	Vamp5	NCBI_Gene:53620,ENSEMBL:ENSMUSG00000073002	MGI:1858622	protein coding gene	vesicle-associated membrane protein 5
6	gene	72.37280	72.37471	negative	MGI_C57BL6J_3040670	BC019510	NA	NA	unclassified gene	cDNA sequence BC019510
6	gene	72.37593	72.37699	negative	MGI_C57BL6J_1925206	A930026B05Rik	NA	NA	unclassified gene	RIKEN cDNA A930026B05 gene
6	gene	72.38522	72.39070	negative	MGI_C57BL6J_1336882	Vamp8	NCBI_Gene:22320,ENSEMBL:ENSMUSG00000050732	MGI:1336882	protein coding gene	vesicle-associated membrane protein 8
6	gene	72.41429	72.43111	positive	MGI_C57BL6J_1927655	Ggcx	NCBI_Gene:56316,ENSEMBL:ENSMUSG00000053460	MGI:1927655	protein coding gene	gamma-glutamyl carboxylase
6	gene	72.43280	72.43956	negative	MGI_C57BL6J_2443731	Mat2a	NCBI_Gene:232087,ENSEMBL:ENSMUSG00000053907	MGI:2443731	protein coding gene	methionine adenosyltransferase II, alpha
6	gene	72.43868	72.44061	positive	MGI_C57BL6J_1925358	Particl	NCBI_Gene:78108,ENSEMBL:ENSMUSG00000108591	MGI:1925358	lncRNA gene	promoter of Mat2a antisense radiation induced circulating long non-coding RNA
6	gene	72.51364	72.53421	negative	MGI_C57BL6J_1918380	Sh2d6	NCBI_Gene:71130,ENSEMBL:ENSMUSG00000052631	MGI:1918380	protein coding gene	SH2 domain containing 6
6	gene	72.53828	72.56298	positive	MGI_C57BL6J_1098259	Capg	NCBI_Gene:12332,ENSEMBL:ENSMUSG00000056737	MGI:1098259	protein coding gene	capping protein (actin filament), gelsolin-like
6	gene	72.56592	72.59841	negative	MGI_C57BL6J_2445168	Elmod3	NCBI_Gene:232089,ENSEMBL:ENSMUSG00000056698	MGI:2445168	protein coding gene	ELMO/CED-12 domain containing 3
6	gene	72.59847	72.60842	positive	MGI_C57BL6J_1914692	Retsat	NCBI_Gene:67442,ENSEMBL:ENSMUSG00000056666	MGI:1914692	protein coding gene	retinol saturase (all trans retinol 13,14 reductase)
6	gene	72.60300	72.60550	negative	MGI_C57BL6J_5753629	Gm45053	ENSEMBL:ENSMUSG00000108368	MGI:5753629	unclassified gene	predicted gene 45053
6	gene	72.60842	72.61700	negative	MGI_C57BL6J_105080	Tgoln1	NCBI_Gene:22134,ENSEMBL:ENSMUSG00000056429	MGI:105080	protein coding gene	trans-golgi network protein
6	gene	72.60984	72.61619	positive	MGI_C57BL6J_5142001	Gm20536	ENSEMBL:ENSMUSG00000092386	MGI:5142001	lncRNA gene	predicted gene 20536
6	gene	72.61096	72.61675	negative	MGI_C57BL6J_105079	Tgoln2	NA	NA	protein coding gene	trans-golgi network protein 2
6	gene	72.62637	72.78925	negative	MGI_C57BL6J_1202876	Tcf7l1	NCBI_Gene:21415,ENSEMBL:ENSMUSG00000055799	MGI:1202876	protein coding gene	transcription factor 7 like 1 (T cell specific, HMG box)
6	gene	72.62929	72.63772	positive	MGI_C57BL6J_3642201	Gm15401	NCBI_Gene:100038714,ENSEMBL:ENSMUSG00000072999	MGI:3642201	lncRNA gene	predicted gene 15401
6	gene	72.63515	72.63855	negative	MGI_C57BL6J_5611197	Gm37969	ENSEMBL:ENSMUSG00000102577	MGI:5611197	unclassified gene	predicted gene, 37969
6	gene	72.64285	72.64409	negative	MGI_C57BL6J_5611342	Gm38114	ENSEMBL:ENSMUSG00000102931	MGI:5611342	unclassified gene	predicted gene, 38114
6	gene	72.64556	72.68653	positive	MGI_C57BL6J_5590550	Gm31391	NCBI_Gene:102633607	MGI:5590550	lncRNA gene	predicted gene, 31391
6	gene	72.65232	72.65360	positive	MGI_C57BL6J_5611548	Gm38320	ENSEMBL:ENSMUSG00000102983	MGI:5611548	unclassified gene	predicted gene, 38320
6	pseudogene	72.68688	72.69836	negative	MGI_C57BL6J_5590474	Gm31315	NCBI_Gene:105244842	MGI:5590474	pseudogene	predicted gene, 31315
6	gene	72.69921	72.70509	positive	MGI_C57BL6J_3707435	Gm15402	ENSEMBL:ENSMUSG00000079524	MGI:3707435	lncRNA gene	predicted gene 15402
6	gene	72.74179	72.75002	positive	MGI_C57BL6J_5590408	Gm31249	NCBI_Gene:102633417	MGI:5590408	lncRNA gene	predicted gene, 31249
6	gene	72.74911	72.75191	negative	MGI_C57BL6J_5610964	Gm37736	ENSEMBL:ENSMUSG00000104501	MGI:5610964	unclassified gene	predicted gene, 37736
6	gene	72.84111	72.89998	negative	MGI_C57BL6J_1921537	Kcmf1	NCBI_Gene:74287,ENSEMBL:ENSMUSG00000055239	MGI:1921537	protein coding gene	potassium channel modulatory factor 1
6	gene	72.88361	72.88546	negative	MGI_C57BL6J_2141724	6030456E01Rik	NA	NA	unclassified gene	RIKEN cDNA 6030456E01 gene
6	gene	72.89496	72.89592	negative	MGI_C57BL6J_1926117	D530018E20Rik	ENSEMBL:ENSMUSG00000107610	MGI:1926117	unclassified gene	RIKEN cDNA D530018E20 gene
6	gene	72.95324	72.95725	positive	MGI_C57BL6J_5477134	Gm26640	ENSEMBL:ENSMUSG00000097569	MGI:5477134	lncRNA gene	predicted gene, 26640
6	gene	72.95735	72.95875	negative	MGI_C57BL6J_109146	Tmsb10	NCBI_Gene:19240,ENSEMBL:ENSMUSG00000079523	MGI:109146	protein coding gene	thymosin, beta 10
6	pseudogene	72.98248	72.98306	negative	MGI_C57BL6J_5010587	Gm18402	NCBI_Gene:100417110,ENSEMBL:ENSMUSG00000107661	MGI:5010587	pseudogene	predicted gene, 18402
6	gene	73.00710	73.01073	positive	MGI_C57BL6J_5590706	Gm31547	NCBI_Gene:102633814	MGI:5590706	lncRNA gene	predicted gene, 31547
6	gene	73.01192	73.03352	positive	MGI_C57BL6J_5295667	Gm20560	NCBI_Gene:330354,ENSEMBL:ENSMUSG00000107546	MGI:5295667	lncRNA gene	predicted gene, 20560
6	gene	73.01761	73.22240	negative	MGI_C57BL6J_107744	Dnah6	NCBI_Gene:330355,ENSEMBL:ENSMUSG00000052861	MGI:107744	protein coding gene	dynein, axonemal, heavy chain 6
6	gene	73.05065	73.05117	positive	MGI_C57BL6J_1918715	8430413B15Rik	NA	NA	unclassified gene	RIKEN cDNA 8430413B15 gene
6	gene	73.14149	73.14168	negative	MGI_C57BL6J_5454310	Gm24533	ENSEMBL:ENSMUSG00000065072	MGI:5454310	snoRNA gene	predicted gene, 24533
6	gene	73.22280	73.22589	positive	MGI_C57BL6J_5623262	Gm40377	NCBI_Gene:105244843,ENSEMBL:ENSMUSG00000107440	MGI:5623262	lncRNA gene	predicted gene, 40377
6	gene	73.24838	73.27691	positive	MGI_C57BL6J_1927234	Suclg1	NCBI_Gene:56451,ENSEMBL:ENSMUSG00000052738	MGI:1927234	protein coding gene	succinate-CoA ligase, GDP-forming, alpha subunit
6	gene	73.24876	73.25449	positive	MGI_C57BL6J_5621719	Gm38834	NCBI_Gene:105242685	MGI:5621719	lncRNA gene	predicted gene, 38834
6	gene	73.28760	73.28984	negative	MGI_C57BL6J_5623263	Gm40378	NCBI_Gene:105244844	MGI:5623263	protein coding gene	predicted gene, 40378
6	pseudogene	73.31022	73.31064	negative	MGI_C57BL6J_5690867	Gm44475	ENSEMBL:ENSMUSG00000107931	MGI:5690867	pseudogene	predicted gene, 44475
6	gene	73.39214	73.39224	positive	MGI_C57BL6J_5454147	Gm24370	ENSEMBL:ENSMUSG00000093965	MGI:5454147	miRNA gene	predicted gene, 24370
6	pseudogene	73.42031	73.42122	negative	MGI_C57BL6J_3030044	Olfr210-ps1	NCBI_Gene:257960,ENSEMBL:ENSMUSG00000108032	MGI:3030044	pseudogene	olfactory receptor 210, pseudogene 1
6	gene	73.43697	73.47102	negative	MGI_C57BL6J_1920658	1700065L07Rik	NCBI_Gene:73408,ENSEMBL:ENSMUSG00000107408	MGI:1920658	lncRNA gene	RIKEN cDNA 1700065L07 gene
6	gene	73.46857	73.46967	negative	MGI_C57BL6J_1913990	4931417E11Rik	NCBI_Gene:66740,ENSEMBL:ENSMUSG00000056197	MGI:1913990	protein coding gene	RIKEN cDNA 4931417E11 gene
6	pseudogene	73.52881	73.52924	negative	MGI_C57BL6J_3782559	Gm4374	ENSEMBL:ENSMUSG00000107639	MGI:3782559	pseudogene	predicted gene 4374
6	gene	73.58611	73.60867	negative	MGI_C57BL6J_5590906	Gm31747	NCBI_Gene:102634075,ENSEMBL:ENSMUSG00000107441	MGI:5590906	lncRNA gene	predicted gene, 31747
6	pseudogene	73.88566	73.88585	negative	MGI_C57BL6J_5690617	Gm44225	ENSEMBL:ENSMUSG00000107646	MGI:5690617	pseudogene	predicted gene, 44225
6	gene	74.34095	74.34108	positive	MGI_C57BL6J_5455956	Gm26179	ENSEMBL:ENSMUSG00000093964	MGI:5455956	snoRNA gene	predicted gene, 26179
6	gene	74.45180	74.45190	negative	MGI_C57BL6J_5453701	Gm23924	ENSEMBL:ENSMUSG00000064408	MGI:5453701	snRNA gene	predicted gene, 23924
6	gene	74.50505	74.50516	negative	MGI_C57BL6J_5452031	Gm22254	ENSEMBL:ENSMUSG00000096282	MGI:5452031	miRNA gene	predicted gene, 22254
6	pseudogene	75.18739	75.18849	negative	MGI_C57BL6J_3644228	Gm8992	NCBI_Gene:668132,ENSEMBL:ENSMUSG00000107467	MGI:3644228	pseudogene	predicted gene 8992
6	pseudogene	75.20199	75.20297	positive	MGI_C57BL6J_3644225	Gm8993	NCBI_Gene:668136,ENSEMBL:ENSMUSG00000097957	MGI:3644225	pseudogene	predicted gene 8993
6	pseudogene	75.29604	75.29814	negative	MGI_C57BL6J_3643375	Gm6210	NCBI_Gene:621306,ENSEMBL:ENSMUSG00000107951	MGI:3643375	pseudogene	predicted gene 6210
6	pseudogene	75.38305	75.38402	negative	MGI_C57BL6J_3647166	Gm8999	NCBI_Gene:668143,ENSEMBL:ENSMUSG00000107918	MGI:3647166	pseudogene	predicted gene 8999
6	gene	75.42745	75.47498	negative	MGI_C57BL6J_5621720	Gm38835	NCBI_Gene:105242686	MGI:5621720	lncRNA gene	predicted gene, 38835
6	gene	75.57209	75.57346	negative	MGI_C57BL6J_1918549	4933439N06Rik	ENSEMBL:ENSMUSG00000107830	MGI:1918549	unclassified gene	RIKEN cDNA 4933439N06 gene
6	pseudogene	75.78216	75.78278	negative	MGI_C57BL6J_3647168	Gm9001	NCBI_Gene:668145,ENSEMBL:ENSMUSG00000080824	MGI:3647168	pseudogene	predicted gene 9001
6	gene	75.90359	75.90581	negative	MGI_C57BL6J_5590965	Gm31806	NCBI_Gene:102634151	MGI:5590965	lncRNA gene	predicted gene, 31806
6	gene	75.96805	75.97498	negative	MGI_C57BL6J_5690505	Gm44113	ENSEMBL:ENSMUSG00000107880	MGI:5690505	lncRNA gene	predicted gene, 44113
6	pseudogene	76.12163	76.12290	positive	MGI_C57BL6J_3644799	Gm5995	NCBI_Gene:546907,ENSEMBL:ENSMUSG00000107685	MGI:3644799	pseudogene	predicted gene 5995
6	gene	76.18171	76.18182	positive	MGI_C57BL6J_5690726	Gm44334	ENSEMBL:ENSMUSG00000106544	MGI:5690726	miRNA gene	predicted gene, 44334
6	gene	76.20012	76.20028	negative	MGI_C57BL6J_5452060	Gm22283	ENSEMBL:ENSMUSG00000064490	MGI:5452060	snRNA gene	predicted gene, 22283
6	pseudogene	76.28442	76.28493	positive	MGI_C57BL6J_5690518	Gm44126	ENSEMBL:ENSMUSG00000107770	MGI:5690518	pseudogene	predicted gene, 44126
6	pseudogene	76.45531	76.45592	negative	MGI_C57BL6J_5690555	Gm44163	NCBI_Gene:108169180,ENSEMBL:ENSMUSG00000107612	MGI:5690555	pseudogene	predicted gene, 44163
6	gene	76.49543	76.49778	negative	MGI_C57BL6J_3644000	Gm9008	NCBI_Gene:668155,ENSEMBL:ENSMUSG00000072476	MGI:3644000	protein coding gene	predicted pseudogene 9008
6	gene	76.49608	76.49752	positive	MGI_C57BL6J_5690558	Gm44166	ENSEMBL:ENSMUSG00000107651	MGI:5690558	lncRNA gene	predicted gene, 44166
6	gene	76.69545	76.71158	negative	MGI_C57BL6J_5621721	Gm38836	NCBI_Gene:105242687	MGI:5621721	lncRNA gene	predicted gene, 38836
6	gene	76.81034	76.81555	negative	MGI_C57BL6J_5591019	Gm31860	NCBI_Gene:102634227	MGI:5591019	lncRNA gene	predicted gene, 31860
6	gene	76.88164	77.97970	negative	MGI_C57BL6J_88275	Ctnna2	NCBI_Gene:12386,ENSEMBL:ENSMUSG00000063063	MGI:88275	protein coding gene	catenin (cadherin associated protein), alpha 2
6	gene	76.98798	76.98965	negative	MGI_C57BL6J_1923313	5830431M20Rik	NA	NA	unclassified gene	RIKEN cDNA 5830431M20 gene
6	gene	77.24248	77.25992	positive	MGI_C57BL6J_2389173	Lrrtm1	NCBI_Gene:74342,ENSEMBL:ENSMUSG00000060780	MGI:2389173	protein coding gene	leucine rich repeat transmembrane neuronal 1
6	gene	77.32391	77.32480	negative	MGI_C57BL6J_5690626	Gm44234	ENSEMBL:ENSMUSG00000108057	MGI:5690626	unclassified gene	predicted gene, 44234
6	gene	77.38026	77.38247	negative	MGI_C57BL6J_1918003	6330415B21Rik	NCBI_Gene:70753,ENSEMBL:ENSMUSG00000108077	MGI:1918003	lncRNA gene	RIKEN cDNA 6330415B21 gene
6	gene	77.41230	77.41642	negative	MGI_C57BL6J_5690827	Gm44435	ENSEMBL:ENSMUSG00000108005	MGI:5690827	unclassified gene	predicted gene, 44435
6	gene	77.42868	77.43351	negative	MGI_C57BL6J_5690825	Gm44433	ENSEMBL:ENSMUSG00000107512	MGI:5690825	unclassified gene	predicted gene, 44433
6	gene	77.47114	77.47419	negative	MGI_C57BL6J_5690627	Gm44235	ENSEMBL:ENSMUSG00000107917	MGI:5690627	unclassified gene	predicted gene, 44235
6	gene	77.53985	77.54308	negative	MGI_C57BL6J_5690830	Gm44438	ENSEMBL:ENSMUSG00000107947	MGI:5690830	unclassified gene	predicted gene, 44438
6	gene	77.58700	77.58848	negative	MGI_C57BL6J_5690678	Gm44286	ENSEMBL:ENSMUSG00000107707	MGI:5690678	unclassified gene	predicted gene, 44286
6	gene	77.59874	77.60517	negative	MGI_C57BL6J_5621722	Gm38837	NCBI_Gene:105242688	MGI:5621722	lncRNA gene	predicted gene, 38837
6	gene	77.69298	77.69577	negative	MGI_C57BL6J_5690680	Gm44288	ENSEMBL:ENSMUSG00000107483	MGI:5690680	unclassified gene	predicted gene, 44288
6	gene	77.74574	77.74978	negative	MGI_C57BL6J_5690829	Gm44437	ENSEMBL:ENSMUSG00000108102	MGI:5690829	unclassified gene	predicted gene, 44437
6	gene	77.98452	77.98657	positive	MGI_C57BL6J_5690647	Gm44255	ENSEMBL:ENSMUSG00000107473	MGI:5690647	unclassified gene	predicted gene, 44255
6	pseudogene	78.06857	78.06959	negative	MGI_C57BL6J_5434400	Gm21045	NCBI_Gene:100534366,ENSEMBL:ENSMUSG00000097964	MGI:5434400	pseudogene	predicted gene, 21045
6	pseudogene	78.21588	78.21717	positive	MGI_C57BL6J_3644832	Gm5576	NCBI_Gene:434050,ENSEMBL:ENSMUSG00000108045	MGI:3644832	pseudogene	predicted pseudogene 5576
6	gene	78.37066	78.37347	positive	MGI_C57BL6J_97478	Reg3b	NCBI_Gene:18489,ENSEMBL:ENSMUSG00000071356	MGI:97478	protein coding gene	regenerating islet-derived 3 beta
6	gene	78.37587	78.37887	negative	MGI_C57BL6J_1353426	Reg3d	NCBI_Gene:30053,ENSEMBL:ENSMUSG00000068341	MGI:1353426	protein coding gene	regenerating islet-derived 3 delta
6	gene	78.38071	78.38384	positive	MGI_C57BL6J_109408	Reg3a	NCBI_Gene:19694,ENSEMBL:ENSMUSG00000079516	MGI:109408	protein coding gene	regenerating islet-derived 3 alpha
6	gene	78.39562	78.40811	positive	MGI_C57BL6J_97896	Reg2	NCBI_Gene:19693,ENSEMBL:ENSMUSG00000023140	MGI:97896	protein coding gene	regenerating islet-derived 2
6	gene	78.42271	78.42867	positive	MGI_C57BL6J_97895	Reg1	NCBI_Gene:19692,ENSEMBL:ENSMUSG00000059654	MGI:97895	protein coding gene	regenerating islet-derived 1
6	gene	78.46627	78.46887	negative	MGI_C57BL6J_109406	Reg3g	NCBI_Gene:19695,ENSEMBL:ENSMUSG00000030017	MGI:109406	protein coding gene	regenerating islet-derived 3 gamma
6	pseudogene	78.48269	78.48366	positive	MGI_C57BL6J_5434747	Gm21392	ENSEMBL:ENSMUSG00000097940	MGI:5434747	pseudogene	predicted gene, 21392
6	pseudogene	78.49676	78.49747	negative	MGI_C57BL6J_3648423	Gm6072	NCBI_Gene:606545,ENSEMBL:ENSMUSG00000108073	MGI:3648423	pseudogene	predicted gene 6072
6	gene	78.91117	78.91133	positive	MGI_C57BL6J_5453504	Gm23727	ENSEMBL:ENSMUSG00000094980	MGI:5453504	snRNA gene	predicted gene, 23727
6	gene	78.91260	78.91292	negative	MGI_C57BL6J_5579711	Gm29005	ENSEMBL:ENSMUSG00000101720	MGI:5579711	lncRNA gene	predicted gene 29005
6	gene	79.03204	79.03587	positive	MGI_C57BL6J_5012547	Gm20362	NCBI_Gene:100504701,ENSEMBL:ENSMUSG00000108072	MGI:5012547	lncRNA gene	predicted gene, 20362
6	pseudogene	79.04811	79.04899	positive	MGI_C57BL6J_3646896	Gm5311	NCBI_Gene:384440,ENSEMBL:ENSMUSG00000107772	MGI:3646896	pseudogene	predicted gene 5311
6	pseudogene	79.54119	79.54206	positive	MGI_C57BL6J_3648928	Gm6261	NCBI_Gene:621815,ENSEMBL:ENSMUSG00000107618	MGI:3648928	pseudogene	predicted gene 6261
6	gene	79.68885	79.71091	positive	MGI_C57BL6J_5690663	Gm44271	ENSEMBL:ENSMUSG00000108027	MGI:5690663	lncRNA gene	predicted gene, 44271
6	gene	79.81792	79.81836	positive	MGI_C57BL6J_5295700	Gm20594	NCBI_Gene:100463512,ENSEMBL:ENSMUSG00000096887	MGI:5295700	protein coding gene	predicted gene, 20594
6	gene	79.92641	80.02316	negative	MGI_C57BL6J_3782594	Gm4409	ENSEMBL:ENSMUSG00000086739	MGI:3782594	lncRNA gene	predicted gene 4409
6	gene	80.01886	80.81016	positive	MGI_C57BL6J_2389180	Lrrtm4	NCBI_Gene:243499,ENSEMBL:ENSMUSG00000052581	MGI:2389180	protein coding gene	leucine rich repeat transmembrane neuronal 4
6	gene	80.04868	80.05133	positive	MGI_C57BL6J_5690632	Gm44240	ENSEMBL:ENSMUSG00000107498	MGI:5690632	unclassified gene	predicted gene, 44240
6	gene	80.14374	80.16666	positive	MGI_C57BL6J_5591250	Gm32091	NCBI_Gene:102634534	MGI:5591250	lncRNA gene	predicted gene, 32091
6	gene	80.21745	80.21948	positive	MGI_C57BL6J_5690620	Gm44228	ENSEMBL:ENSMUSG00000107996	MGI:5690620	unclassified gene	predicted gene, 44228
6	gene	80.26850	80.27205	positive	MGI_C57BL6J_5690622	Gm44230	ENSEMBL:ENSMUSG00000107905	MGI:5690622	unclassified gene	predicted gene, 44230
6	gene	80.30261	80.30437	positive	MGI_C57BL6J_5012556	Gm20371	ENSEMBL:ENSMUSG00000108264	MGI:5012556	unclassified gene	predicted gene, 20371
6	gene	80.31919	80.32085	positive	MGI_C57BL6J_5690633	Gm44241	ENSEMBL:ENSMUSG00000107840	MGI:5690633	unclassified gene	predicted gene, 44241
6	gene	80.44535	80.44784	positive	MGI_C57BL6J_5690621	Gm44229	ENSEMBL:ENSMUSG00000108088	MGI:5690621	unclassified gene	predicted gene, 44229
6	gene	80.50487	80.50535	positive	MGI_C57BL6J_1924775	C030013C02Rik	NA	NA	unclassified gene	RIKEN cDNA C030013C02 gene
6	gene	80.51459	80.51731	positive	MGI_C57BL6J_5690634	Gm44242	ENSEMBL:ENSMUSG00000107826	MGI:5690634	unclassified gene	predicted gene, 44242
6	gene	80.65503	80.65910	positive	MGI_C57BL6J_5690623	Gm44231	ENSEMBL:ENSMUSG00000108173	MGI:5690623	unclassified gene	predicted gene, 44231
6	gene	80.82714	80.82981	positive	MGI_C57BL6J_5690292	Gm43900	ENSEMBL:ENSMUSG00000108040	MGI:5690292	unclassified gene	predicted gene, 43900
6	pseudogene	81.42081	81.42126	negative	MGI_C57BL6J_5690293	Gm43901	ENSEMBL:ENSMUSG00000107691	MGI:5690293	pseudogene	predicted gene, 43901
6	gene	81.42900	81.44626	negative	MGI_C57BL6J_5621723	Gm38838	NCBI_Gene:105242690	MGI:5621723	lncRNA gene	predicted gene, 38838
6	gene	81.63831	81.63847	positive	MGI_C57BL6J_5456041	Gm26264	ENSEMBL:ENSMUSG00000065212	MGI:5456041	snRNA gene	predicted gene, 26264
6	gene	81.67595	81.71620	negative	MGI_C57BL6J_5621724	Gm38839	NCBI_Gene:105242691,ENSEMBL:ENSMUSG00000107419	MGI:5621724	lncRNA gene	predicted gene, 38839
6	gene	81.71846	81.72933	negative	MGI_C57BL6J_5591382	Gm32223	NCBI_Gene:102634701	MGI:5591382	lncRNA gene	predicted gene, 32223
6	gene	81.80679	81.80691	positive	MGI_C57BL6J_5452307	Gm22530	ENSEMBL:ENSMUSG00000089445	MGI:5452307	snoRNA gene	predicted gene, 22530
6	pseudogene	81.84067	81.84136	negative	MGI_C57BL6J_3647948	Gm4874	NCBI_Gene:232143,ENSEMBL:ENSMUSG00000108202	MGI:3647948	pseudogene	predicted gene 4874
6	pseudogene	81.86424	81.87591	negative	MGI_C57BL6J_5621725	Gm38840	NCBI_Gene:105242692,ENSEMBL:ENSMUSG00000107817	MGI:5621725	pseudogene	predicted gene, 38840
6	gene	81.89382	81.89534	negative	MGI_C57BL6J_1920811	1700097M23Rik	ENSEMBL:ENSMUSG00000108194	MGI:1920811	unclassified gene	RIKEN cDNA 1700097M23 gene
6	gene	81.89559	81.89566	negative	MGI_C57BL6J_5562768	Mir7232	miRBase:MI0023727,NCBI_Gene:102465711,ENSEMBL:ENSMUSG00000106154	MGI:5562768	miRNA gene	microRNA 7232
6	gene	81.89660	81.89668	negative	MGI_C57BL6J_3619414	Mir468	miRBase:MI0002403,NCBI_Gene:723871,ENSEMBL:ENSMUSG00000106253	MGI:3619414	miRNA gene	microRNA 468
6	gene	81.90046	81.91080	negative	MGI_C57BL6J_1921470	1700009C05Rik	NCBI_Gene:74220,ENSEMBL:ENSMUSG00000101404	MGI:1921470	lncRNA gene	RIKEN cDNA 1700009C05 gene
6	gene	81.91359	81.92043	positive	MGI_C57BL6J_5621726	Gm38841	NCBI_Gene:105242693	MGI:5621726	lncRNA gene	predicted gene, 38841
6	gene	81.92364	81.95991	positive	MGI_C57BL6J_2141656	Gcfc2	NCBI_Gene:330361,ENSEMBL:ENSMUSG00000035125	MGI:2141656	protein coding gene	GC-rich sequence DNA binding factor 2
6	gene	81.95783	81.96596	negative	MGI_C57BL6J_1926274	Mrpl19	NCBI_Gene:56284,ENSEMBL:ENSMUSG00000030045	MGI:1926274	protein coding gene	mitochondrial ribosomal protein L19
6	gene	81.97160	81.97296	negative	MGI_C57BL6J_5621727	Gm38842	NCBI_Gene:105242694	MGI:5621727	lncRNA gene	predicted gene, 38842
6	gene	81.98432	81.99243	positive	MGI_C57BL6J_5012568	Gm20383	NCBI_Gene:100504740,ENSEMBL:ENSMUSG00000107412	MGI:5012568	lncRNA gene	predicted gene, 20383
6	gene	81.98575	81.98674	negative	MGI_C57BL6J_5690594	Gm44202	ENSEMBL:ENSMUSG00000108288	MGI:5690594	lncRNA gene	predicted gene, 44202
6	gene	82.02588	82.03372	negative	MGI_C57BL6J_5591537	Gm32378	NCBI_Gene:102634905	MGI:5591537	lncRNA gene	predicted gene, 32378
6	gene	82.04104	82.09310	positive	MGI_C57BL6J_2385247	Eva1a	NCBI_Gene:232146,ENSEMBL:ENSMUSG00000035104	MGI:2385247	protein coding gene	eva-1 homolog A (C. elegans)
6	gene	82.05045	82.05258	negative	MGI_C57BL6J_3802115	Gm15864	ENSEMBL:ENSMUSG00000087136	MGI:3802115	lncRNA gene	predicted gene 15864
6	gene	82.11977	82.12607	positive	MGI_C57BL6J_5623266	Gm40381	NCBI_Gene:105244847	MGI:5623266	lncRNA gene	predicted gene, 40381
6	pseudogene	82.24217	82.24285	positive	MGI_C57BL6J_5591020	Gm31861	ENSEMBL:ENSMUSG00000108224	MGI:5591020	pseudogene	predicted gene, 31861
6	gene	82.31883	82.32298	negative	MGI_C57BL6J_5690601	Gm44209	ENSEMBL:ENSMUSG00000107809	MGI:5690601	unclassified gene	predicted gene, 44209
6	gene	82.40200	82.56010	positive	MGI_C57BL6J_98475	Tacr1	NCBI_Gene:21336,ENSEMBL:ENSMUSG00000030043	MGI:98475	protein coding gene	tachykinin receptor 1
6	gene	82.61892	82.70537	negative	MGI_C57BL6J_1914229	Pole4	NCBI_Gene:66979,ENSEMBL:ENSMUSG00000030042	MGI:1914229	protein coding gene	polymerase (DNA-directed), epsilon 4 (p12 subunit)
6	gene	82.67967	82.70628	positive	MGI_C57BL6J_5591584	Gm32425	NCBI_Gene:102634973	MGI:5591584	lncRNA gene	predicted gene, 32425
6	gene	82.68013	82.69482	positive	MGI_C57BL6J_5690537	Gm44145	ENSEMBL:ENSMUSG00000107453	MGI:5690537	lncRNA gene	predicted gene, 44145
6	gene	82.71074	82.71481	negative	MGI_C57BL6J_5591693	Gm32534	NCBI_Gene:102635114	MGI:5591693	lncRNA gene	predicted gene, 32534
6	gene	82.71438	82.71597	positive	MGI_C57BL6J_5591639	Gm32480	NCBI_Gene:102635044	MGI:5591639	lncRNA gene	predicted gene, 32480
6	gene	82.72502	82.77445	negative	MGI_C57BL6J_1315197	Hk2	NCBI_Gene:15277,ENSEMBL:ENSMUSG00000000628	MGI:1315197	protein coding gene	hexokinase 2
6	gene	82.76428	82.76729	positive	MGI_C57BL6J_4937861	Gm17034	ENSEMBL:ENSMUSG00000090293	MGI:4937861	lncRNA gene	predicted gene 17034
6	gene	82.80377	82.80518	negative	MGI_C57BL6J_5621728	Gm38843	NCBI_Gene:105242696,ENSEMBL:ENSMUSG00000109556	MGI:5621728	lncRNA gene	predicted gene, 38843
6	gene	82.82321	82.84139	positive	MGI_C57BL6J_5591750	Gm32591	NCBI_Gene:102635189,ENSEMBL:ENSMUSG00000108015	MGI:5591750	lncRNA gene	predicted gene, 32591
6	gene	82.87786	82.88185	negative	MGI_C57BL6J_1916902	2310069B03Rik	NCBI_Gene:69652,ENSEMBL:ENSMUSG00000100291	MGI:1916902	lncRNA gene	RIKEN cDNA 2310069B03 gene
6	pseudogene	82.88726	82.88872	negative	MGI_C57BL6J_3646278	Gm6312	NCBI_Gene:622318,ENSEMBL:ENSMUSG00000107401	MGI:3646278	pseudogene	predicted gene 6312
6	gene	82.89687	82.90521	negative	MGI_C57BL6J_5753721	Gm45145	ENSEMBL:ENSMUSG00000109076	MGI:5753721	lncRNA gene	predicted gene 45145
6	gene	82.91188	82.93977	negative	MGI_C57BL6J_1340055	Sema4f	NCBI_Gene:20355,ENSEMBL:ENSMUSG00000000627	MGI:1340055	protein coding gene	sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
6	gene	82.94690	83.03031	positive	MGI_C57BL6J_1315200	M1ap	NCBI_Gene:110958,ENSEMBL:ENSMUSG00000030041	MGI:1315200	protein coding gene	meiosis 1 associated protein
6	pseudogene	82.95278	82.95314	positive	MGI_C57BL6J_5011472	Gm19287	NCBI_Gene:102635339,ENSEMBL:ENSMUSG00000107701	MGI:5011472	pseudogene	predicted gene, 19287
6	pseudogene	82.99082	82.99158	negative	MGI_C57BL6J_5690377	Gm43985	ENSEMBL:ENSMUSG00000107829	MGI:5690377	pseudogene	predicted gene, 43985
6	gene	82.99165	82.99311	positive	MGI_C57BL6J_5690373	Gm43981	ENSEMBL:ENSMUSG00000107599	MGI:5690373	unclassified gene	predicted gene, 43981
6	gene	83.00818	83.02290	negative	MGI_C57BL6J_5591803	Gm32644	NCBI_Gene:102635258	MGI:5591803	lncRNA gene	predicted gene, 32644
6	gene	83.03093	83.03347	negative	MGI_C57BL6J_893587	Dok1	NCBI_Gene:13448,ENSEMBL:ENSMUSG00000068335	MGI:893587	protein coding gene	docking protein 1
6	gene	83.03417	83.05256	positive	MGI_C57BL6J_1337004	Loxl3	NCBI_Gene:16950,ENSEMBL:ENSMUSG00000000693	MGI:1337004	protein coding gene	lysyl oxidase-like 3
6	gene	83.04971	83.04977	positive	MGI_C57BL6J_5530871	Mir7040	miRBase:MI0022889,NCBI_Gene:102465630,ENSEMBL:ENSMUSG00000099035	MGI:5530871	miRNA gene	microRNA 7040
6	gene	83.05127	83.05527	negative	MGI_C57BL6J_1928676	Htra2	NCBI_Gene:64704,ENSEMBL:ENSMUSG00000068329	MGI:1928676	protein coding gene	HtrA serine peptidase 2
6	gene	83.05452	83.05781	positive	MGI_C57BL6J_107789	Aup1	NCBI_Gene:11993,ENSEMBL:ENSMUSG00000068328	MGI:107789	protein coding gene	ancient ubiquitous protein 1
6	gene	83.05775	83.06732	positive	MGI_C57BL6J_2136388	Dqx1	NCBI_Gene:93838,ENSEMBL:ENSMUSG00000009145	MGI:2136388	protein coding gene	DEAQ RNA-dependent ATPase
6	gene	83.06832	83.07029	negative	MGI_C57BL6J_1350935	Tlx2	NCBI_Gene:21909,ENSEMBL:ENSMUSG00000068327	MGI:1350935	protein coding gene	T cell leukemia, homeobox 2
6	gene	83.07460	83.07612	negative	MGI_C57BL6J_5610320	Gm37092	ENSEMBL:ENSMUSG00000103189	MGI:5610320	unclassified gene	predicted gene, 37092
6	gene	83.07787	83.08085	positive	MGI_C57BL6J_1917087	Pcgf1	NCBI_Gene:69837,ENSEMBL:ENSMUSG00000069678	MGI:1917087	protein coding gene	polycomb group ring finger 1
6	gene	83.08637	83.08824	positive	MGI_C57BL6J_1342288	Lbx2	NCBI_Gene:16815,ENSEMBL:ENSMUSG00000034968	MGI:1342288	protein coding gene	ladybird homeobox 2
6	gene	83.09031	83.09039	negative	MGI_C57BL6J_4441434	Mir3470a	miRBase:MI0014696,NCBI_Gene:100499518,ENSEMBL:ENSMUSG00000095323	MGI:4441434	miRNA gene	microRNA 3470a
6	gene	83.10152	83.10912	positive	MGI_C57BL6J_3045292	Ccdc142	NCBI_Gene:243510,ENSEMBL:ENSMUSG00000107499	MGI:3045292	protein coding gene	coiled-coil domain containing 142
6	gene	83.10162	83.10994	positive	MGI_C57BL6J_5662825	Gm42688	ENSEMBL:ENSMUSG00000079511	MGI:5662825	protein coding gene	predicted gene 42688
6	gene	83.10661	83.10905	negative	MGI_C57BL6J_3783052	Ccdc142os	ENSEMBL:ENSMUSG00000087578	MGI:3783052	antisense lncRNA gene	coiled-coil domain containing 142, opposite strand
6	gene	83.10904	83.10994	positive	MGI_C57BL6J_1915749	Mrpl53	NCBI_Gene:68499,ENSEMBL:ENSMUSG00000030037	MGI:1915749	protein coding gene	mitochondrial ribosomal protein L53
6	gene	83.11550	83.11890	positive	MGI_C57BL6J_1929872	Mogs	NCBI_Gene:57377,ENSEMBL:ENSMUSG00000030036	MGI:1929872	protein coding gene	mannosyl-oligosaccharide glucosidase
6	gene	83.11904	83.12156	negative	MGI_C57BL6J_104710	Wbp1	NCBI_Gene:22377,ENSEMBL:ENSMUSG00000030035	MGI:104710	protein coding gene	WW domain binding protein 1
6	gene	83.12176	83.12543	negative	MGI_C57BL6J_1917270	Ino80b	NCBI_Gene:70020,ENSEMBL:ENSMUSG00000030034	MGI:1917270	protein coding gene	INO80 complex subunit B
6	gene	83.12252	83.12440	positive	MGI_C57BL6J_5690679	Gm44287	ENSEMBL:ENSMUSG00000108109	MGI:5690679	lncRNA gene	predicted gene, 44287
6	gene	83.13443	83.15258	positive	MGI_C57BL6J_107371	Rtkn	NCBI_Gene:20166,ENSEMBL:ENSMUSG00000034930	MGI:107371	protein coding gene	rhotekin
6	gene	83.14936	83.15644	negative	MGI_C57BL6J_1922909	Wdr54	NCBI_Gene:75659,ENSEMBL:ENSMUSG00000030032	MGI:1922909	protein coding gene	WD repeat domain 54
6	gene	83.15640	83.16298	positive	MGI_C57BL6J_1919087	1700003E16Rik	NCBI_Gene:71837,ENSEMBL:ENSMUSG00000030030	MGI:1919087	protein coding gene	RIKEN cDNA 1700003E16 gene
6	gene	83.16591	83.20012	positive	MGI_C57BL6J_107745	Dctn1	NCBI_Gene:13191,ENSEMBL:ENSMUSG00000031865	MGI:107745	protein coding gene	dynactin 1
6	gene	83.16615	83.17526	negative	MGI_C57BL6J_3783068	Gm15624	NCBI_Gene:102635553,ENSEMBL:ENSMUSG00000085782	MGI:3783068	lncRNA gene	predicted gene 15624
6	gene	83.20758	83.30495	positive	MGI_C57BL6J_2443220	Slc4a5	NCBI_Gene:232156,ENSEMBL:ENSMUSG00000068323	MGI:2443220	protein coding gene	solute carrier family 4, sodium bicarbonate cotransporter, member 5
6	gene	83.30569	83.32604	negative	MGI_C57BL6J_1338850	Mthfd2	NCBI_Gene:17768,ENSEMBL:ENSMUSG00000005667	MGI:1338850	protein coding gene	methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
6	gene	83.31414	83.31694	negative	MGI_C57BL6J_5690282	Gm43890	ENSEMBL:ENSMUSG00000108053	MGI:5690282	unclassified gene	predicted gene, 43890
6	gene	83.32602	83.34378	positive	MGI_C57BL6J_2442631	Mob1a	NCBI_Gene:232157,ENSEMBL:ENSMUSG00000043131	MGI:2442631	protein coding gene	MOB kinase activator 1A
6	gene	83.34915	83.36014	positive	MGI_C57BL6J_1925903	Bola3	NCBI_Gene:78653,ENSEMBL:ENSMUSG00000045160	MGI:1925903	protein coding gene	bolA-like 3 (E. coli)
6	gene	83.36237	83.45908	negative	MGI_C57BL6J_2446229	Tet3	NCBI_Gene:194388,ENSEMBL:ENSMUSG00000034832	MGI:2446229	protein coding gene	tet methylcytosine dioxygenase 3
6	gene	83.40100	83.40110	negative	MGI_C57BL6J_5530674	Mir6374	miRBase:MI0021903,NCBI_Gene:102465194,ENSEMBL:ENSMUSG00000099045	MGI:5530674	miRNA gene	microRNA 6374
6	gene	83.41744	83.42099	negative	MGI_C57BL6J_1925345	5430434F05Rik	ENSEMBL:ENSMUSG00000108780	MGI:1925345	unclassified gene	RIKEN cDNA 5430434F05 gene
6	gene	83.44176	83.44832	positive	MGI_C57BL6J_2444713	B230319C09Rik	NCBI_Gene:320775,ENSEMBL:ENSMUSG00000051844	MGI:2444713	lncRNA gene	RIKEN cDNA B230319C09 gene
6	gene	83.48021	83.50697	negative	MGI_C57BL6J_1351602	Dguok	NCBI_Gene:27369,ENSEMBL:ENSMUSG00000014554	MGI:1351602	protein coding gene	deoxyguanosine kinase
6	gene	83.51291	83.53627	negative	MGI_C57BL6J_104589	Actg2	NCBI_Gene:11468,ENSEMBL:ENSMUSG00000059430	MGI:104589	protein coding gene	actin, gamma 2, smooth muscle, enteric
6	gene	83.53168	83.54724	positive	MGI_C57BL6J_5621729	Gm38844	NCBI_Gene:105242698	MGI:5621729	lncRNA gene	predicted gene, 38844
6	gene	83.54321	83.57577	negative	MGI_C57BL6J_1917777	Stambp	NCBI_Gene:70527,ENSEMBL:ENSMUSG00000006906	MGI:1917777	protein coding gene	STAM binding protein
6	pseudogene	83.54886	83.55038	negative	MGI_C57BL6J_5010722	Gm18537	NCBI_Gene:100417334,ENSEMBL:ENSMUSG00000108484	MGI:5010722	pseudogene	predicted gene, 18537
6	gene	83.56804	83.58813	positive	MGI_C57BL6J_5434639	Gm21284	NCBI_Gene:100861870,ENSEMBL:ENSMUSG00000108660	MGI:5434639	lncRNA gene	predicted gene, 21284
6	gene	83.59182	83.59214	negative	MGI_C57BL6J_5454767	Gm24990	ENSEMBL:ENSMUSG00000088031	MGI:5454767	unclassified non-coding RNA gene	predicted gene, 24990
6	pseudogene	83.60076	83.60175	negative	MGI_C57BL6J_3644728	Gm7424	NCBI_Gene:664956,ENSEMBL:ENSMUSG00000108609	MGI:3644728	pseudogene	predicted gene 7424
6	gene	83.64454	83.65619	negative	MGI_C57BL6J_1859834	Clec4f	NCBI_Gene:51811,ENSEMBL:ENSMUSG00000014542	MGI:1859834	protein coding gene	C-type lectin domain family 4, member f
6	gene	83.67121	83.67786	negative	MGI_C57BL6J_2180021	Cd207	NCBI_Gene:246278,ENSEMBL:ENSMUSG00000034783	MGI:2180021	protein coding gene	CD207 antigen
6	gene	83.69281	83.71220	negative	MGI_C57BL6J_3583301	Vax2os	NCBI_Gene:574519,ENSEMBL:ENSMUSG00000085794	MGI:3583301	antisense lncRNA gene	ventral anterior homeobox 2, opposite strand
6	gene	83.70249	83.70268	positive	MGI_C57BL6J_5531154	Gm27772	ENSEMBL:ENSMUSG00000099263	MGI:5531154	unclassified non-coding RNA gene	predicted gene, 27772
6	gene	83.70352	83.70398	positive	MGI_C57BL6J_5531013	Gm27631	ENSEMBL:ENSMUSG00000098591	MGI:5531013	unclassified non-coding RNA gene	predicted gene, 27631
6	gene	83.71074	83.71093	positive	MGI_C57BL6J_5531275	Gm27893	ENSEMBL:ENSMUSG00000098848	MGI:5531275	unclassified non-coding RNA gene	predicted gene, 27893
6	gene	83.71126	83.73831	positive	MGI_C57BL6J_1346018	Vax2	NCBI_Gene:24113,ENSEMBL:ENSMUSG00000034777	MGI:1346018	protein coding gene	ventral anterior homeobox 2
6	gene	83.71280	83.71638	negative	MGI_C57BL6J_5592102	Gm32943	NCBI_Gene:102635663	MGI:5592102	lncRNA gene	predicted gene, 32943
6	gene	83.72130	83.72139	positive	MGI_C57BL6J_5454831	Gm25054	ENSEMBL:ENSMUSG00000087995	MGI:5454831	snRNA gene	predicted gene, 25054
6	gene	83.74299	83.75885	positive	MGI_C57BL6J_103285	Atp6v1b1	NCBI_Gene:110935,ENSEMBL:ENSMUSG00000006269	MGI:103285	protein coding gene	ATPase, H+ transporting, lysosomal V1 subunit B1
6	gene	83.76176	83.76287	negative	MGI_C57BL6J_1915184	1700124L16Rik	NCBI_Gene:67934,ENSEMBL:ENSMUSG00000099354	MGI:1915184	lncRNA gene	RIKEN cDNA 1700124L16 gene
6	gene	83.76264	83.76833	positive	MGI_C57BL6J_1922555	Ankrd53	NCBI_Gene:75305,ENSEMBL:ENSMUSG00000014747	MGI:1922555	protein coding gene	ankyrin repeat domain 53
6	gene	83.76888	83.77582	negative	MGI_C57BL6J_1096575	Tex261	NCBI_Gene:21766,ENSEMBL:ENSMUSG00000014748	MGI:1096575	protein coding gene	testis expressed gene 261
6	pseudogene	83.79260	83.79427	negative	MGI_C57BL6J_3644945	Gm7443	NCBI_Gene:665004,ENSEMBL:ENSMUSG00000108525	MGI:3644945	pseudogene	predicted gene 7443
6	gene	83.79498	83.80402	positive	MGI_C57BL6J_1860418	Nagk	NCBI_Gene:56174,ENSEMBL:ENSMUSG00000034744	MGI:1860418	protein coding gene	N-acetylglucosamine kinase
6	gene	83.80540	83.83174	negative	MGI_C57BL6J_2386865	Paip2b	NCBI_Gene:232164,ENSEMBL:ENSMUSG00000045896	MGI:2386865	protein coding gene	poly(A) binding protein interacting protein 2B
6	gene	83.83694	83.83707	negative	MGI_C57BL6J_5452791	Gm23014	ENSEMBL:ENSMUSG00000077332	MGI:5452791	snoRNA gene	predicted gene, 23014
6	pseudogene	83.84165	83.84227	positive	MGI_C57BL6J_3643752	Gm5312	NCBI_Gene:384450,ENSEMBL:ENSMUSG00000108107	MGI:3643752	pseudogene	predicted gene 5312
6	pseudogene	83.84433	83.84512	negative	MGI_C57BL6J_3645065	Gm6342	NCBI_Gene:622683,ENSEMBL:ENSMUSG00000107644	MGI:3645065	pseudogene	predicted gene 6342
6	gene	83.86710	83.98955	positive	MGI_C57BL6J_1203484	Zfp638	NCBI_Gene:18139,ENSEMBL:ENSMUSG00000030016	MGI:1203484	protein coding gene	zinc finger protein 638
6	gene	83.87006	83.87229	positive	MGI_C57BL6J_5753326	Gm44750	ENSEMBL:ENSMUSG00000108750	MGI:5753326	unclassified gene	predicted gene 44750
6	pseudogene	83.87420	83.87540	negative	MGI_C57BL6J_3779464	Gm5138	NCBI_Gene:380687,ENSEMBL:ENSMUSG00000079501	MGI:3779464	pseudogene	predicted gene 5138
6	pseudogene	83.89696	83.89732	positive	MGI_C57BL6J_5690311	Gm43919	ENSEMBL:ENSMUSG00000107991	MGI:5690311	pseudogene	predicted gene, 43919
6	gene	83.96228	83.96505	positive	MGI_C57BL6J_5690312	Gm43920	ENSEMBL:ENSMUSG00000107534	MGI:5690312	lncRNA gene	predicted gene, 43920
6	gene	84.00831	84.21106	positive	MGI_C57BL6J_1349385	Dysf	NCBI_Gene:26903,ENSEMBL:ENSMUSG00000033788	MGI:1349385	protein coding gene	dysferlin
6	gene	84.00884	84.01246	negative	MGI_C57BL6J_5592183	Gm33024	NCBI_Gene:102635771,ENSEMBL:ENSMUSG00000107682	MGI:5592183	lncRNA gene	predicted gene, 33024
6	pseudogene	84.03159	84.03267	positive	MGI_C57BL6J_3646544	Gm7498	NCBI_Gene:665114,ENSEMBL:ENSMUSG00000108142	MGI:3646544	pseudogene	predicted gene 7498
6	gene	84.09377	84.10701	negative	MGI_C57BL6J_3705288	Gm15475	ENSEMBL:ENSMUSG00000087001	MGI:3705288	lncRNA gene	predicted gene 15475
6	gene	84.22525	84.28660	positive	MGI_C57BL6J_5690519	Gm44127	ENSEMBL:ENSMUSG00000107538	MGI:5690519	lncRNA gene	predicted gene, 44127
6	gene	84.41294	84.42384	negative	MGI_C57BL6J_3642570	Gm10445	NCBI_Gene:100038556,ENSEMBL:ENSMUSG00000107797	MGI:3642570	lncRNA gene	predicted gene 10445
6	gene	84.47984	84.52204	negative	MGI_C57BL6J_5621730	Gm38845	NCBI_Gene:105242699	MGI:5621730	lncRNA gene	predicted gene, 38845
6	gene	84.53588	84.53632	positive	MGI_C57BL6J_1925267	4930504D19Rik	ENSEMBL:ENSMUSG00000107926	MGI:1925267	lncRNA gene	RIKEN cDNA 4930504D19 gene
6	gene	84.57141	84.59391	negative	MGI_C57BL6J_2176159	Cyp26b1	NCBI_Gene:232174,ENSEMBL:ENSMUSG00000063415	MGI:2176159	protein coding gene	cytochrome P450, family 26, subfamily b, polypeptide 1
6	gene	84.61849	85.07026	negative	MGI_C57BL6J_1923164	Exoc6b	NCBI_Gene:75914,ENSEMBL:ENSMUSG00000033769	MGI:1923164	protein coding gene	exocyst complex component 6B
6	pseudogene	84.81222	84.81345	positive	MGI_C57BL6J_3643248	Gm7507	NCBI_Gene:665129,ENSEMBL:ENSMUSG00000098142	MGI:3643248	pseudogene	predicted gene 7507
6	gene	84.89816	84.89863	positive	MGI_C57BL6J_3528153	AW125320	NA	NA	unclassified gene	cDNA sequence AW125320
6	gene	84.92112	84.92500	positive	MGI_C57BL6J_5690404	Gm44012	ENSEMBL:ENSMUSG00000108012	MGI:5690404	lncRNA gene	predicted gene, 44012
6	pseudogene	85.06257	85.06297	positive	MGI_C57BL6J_5690403	Gm44011	ENSEMBL:ENSMUSG00000107629	MGI:5690403	pseudogene	predicted gene, 44011
6	gene	85.06618	85.06644	positive	MGI_C57BL6J_5456130	Gm26353	ENSEMBL:ENSMUSG00000088849	MGI:5456130	unclassified non-coding RNA gene	predicted gene, 26353
6	pseudogene	85.07614	85.07713	positive	MGI_C57BL6J_894683	Npm3-ps1	NCBI_Gene:108176,ENSEMBL:ENSMUSG00000081669	MGI:894683	pseudogene	nucleoplasmin 3, pseudogene 1
6	pseudogene	85.09224	85.09278	positive	MGI_C57BL6J_5690346	Gm43954	ENSEMBL:ENSMUSG00000107409	MGI:5690346	pseudogene	predicted gene, 43954
6	pseudogene	85.09693	85.09707	positive	MGI_C57BL6J_5690347	Gm43955	ENSEMBL:ENSMUSG00000107536	MGI:5690347	pseudogene	predicted gene, 43955
6	pseudogene	85.10281	85.10357	positive	MGI_C57BL6J_5690349	Gm43957	ENSEMBL:ENSMUSG00000107925	MGI:5690349	pseudogene	predicted gene, 43957
6	gene	85.11142	85.12613	negative	MGI_C57BL6J_3647625	Gm5878	NCBI_Gene:545861,ENSEMBL:ENSMUSG00000072952	MGI:3647625	protein coding gene	predicted gene 5878
6	pseudogene	85.11169	85.11227	positive	MGI_C57BL6J_5690351	Gm43959	ENSEMBL:ENSMUSG00000107769	MGI:5690351	pseudogene	predicted gene, 43959
6	gene	85.13018	85.13777	negative	MGI_C57BL6J_103078	Spr	NCBI_Gene:20751,ENSEMBL:ENSMUSG00000033735	MGI:103078	protein coding gene	sepiapterin reductase
6	pseudogene	85.13801	85.14372	positive	MGI_C57BL6J_3642569	Gm10444	NCBI_Gene:102635901,ENSEMBL:ENSMUSG00000072950	MGI:3642569	pseudogene	predicted pseudogene 10444
6	pseudogene	85.14545	85.14638	negative	MGI_C57BL6J_5690677	Gm44285	ENSEMBL:ENSMUSG00000107922	MGI:5690677	pseudogene	predicted gene, 44285
6	gene	85.15034	85.15045	positive	MGI_C57BL6J_5452670	Gm22893	ENSEMBL:ENSMUSG00000089262	MGI:5452670	snoRNA gene	predicted gene, 22893
6	pseudogene	85.15262	85.15622	positive	MGI_C57BL6J_1345187	Spr-ps1	NCBI_Gene:665089,ENSEMBL:ENSMUSG00000068303	MGI:1345187	pseudogene	sepiapterin reductase pseudogene 1
6	gene	85.16584	85.16737	positive	MGI_C57BL6J_5592359	Gm33200	NCBI_Gene:102636005	MGI:5592359	lncRNA gene	predicted gene, 33200
6	gene	85.18744	85.20446	positive	MGI_C57BL6J_95387	Emx1	NCBI_Gene:13796,ENSEMBL:ENSMUSG00000033726	MGI:95387	protein coding gene	empty spiracles homeobox 1
6	gene	85.21305	85.33348	negative	MGI_C57BL6J_2137681	Sfxn5	NCBI_Gene:94282,ENSEMBL:ENSMUSG00000033720	MGI:2137681	protein coding gene	sideroflexin 5
6	gene	85.24386	85.24666	negative	MGI_C57BL6J_2444182	D930014O13Rik	NA	NA	unclassified gene	RIKEN cDNA D930014O13 gene
6	gene	85.33496	85.37465	negative	MGI_C57BL6J_1098586	Rab11fip5	NCBI_Gene:52055,ENSEMBL:ENSMUSG00000051343	MGI:1098586	protein coding gene	RAB11 family interacting protein 5 (class I)
6	gene	85.33629	85.33637	negative	MGI_C57BL6J_3629673	Mir705	miRBase:MI0004689,NCBI_Gene:735267,ENSEMBL:ENSMUSG00000076012	MGI:3629673	miRNA gene	microRNA 705
6	gene	85.37485	85.38697	positive	MGI_C57BL6J_1918407	4933423K11Rik	NA	NA	lncRNA gene	RIKEN cDNA 4933423K11 gene
6	gene	85.42389	85.42888	positive	MGI_C57BL6J_3053002	Noto	NCBI_Gene:384452,ENSEMBL:ENSMUSG00000068302	MGI:3053002	protein coding gene	notochord homeobox
6	gene	85.43198	85.44643	positive	MGI_C57BL6J_108048	Smyd5	NCBI_Gene:232187,ENSEMBL:ENSMUSG00000033706	MGI:108048	protein coding gene	SET and MYND domain containing 5
6	gene	85.44679	85.45197	negative	MGI_C57BL6J_1920577	Pradc1	NCBI_Gene:73327,ENSEMBL:ENSMUSG00000030008	MGI:1920577	protein coding gene	protease-associated domain containing 1
6	gene	85.45150	85.46848	positive	MGI_C57BL6J_107184	Cct7	NCBI_Gene:12468,ENSEMBL:ENSMUSG00000030007	MGI:107184	protein coding gene	chaperonin containing Tcp1, subunit 7 (eta)
6	gene	85.46957	85.50299	negative	MGI_C57BL6J_1261912	Fbxo41	NCBI_Gene:330369,ENSEMBL:ENSMUSG00000047013	MGI:1261912	protein coding gene	F-box protein 41
6	gene	85.51112	85.51359	negative	MGI_C57BL6J_99252	Egr4	NCBI_Gene:13656,ENSEMBL:ENSMUSG00000071341	MGI:99252	protein coding gene	early growth response 4
6	pseudogene	85.52945	85.52992	positive	MGI_C57BL6J_5690415	Gm44023	ENSEMBL:ENSMUSG00000107410	MGI:5690415	pseudogene	predicted gene, 44023
6	gene	85.58750	85.72661	positive	MGI_C57BL6J_1934606	Alms1	NCBI_Gene:236266,ENSEMBL:ENSMUSG00000063810	MGI:1934606	protein coding gene	ALMS1, centrosome and basal body associated
6	gene	85.63286	85.63516	positive	MGI_C57BL6J_5663725	Gm43588	ENSEMBL:ENSMUSG00000107370	MGI:5663725	unclassified gene	predicted gene 43588
6	gene	85.67928	85.68286	positive	MGI_C57BL6J_5662737	Gm42600	ENSEMBL:ENSMUSG00000107278	MGI:5662737	unclassified gene	predicted gene 42600
6	gene	85.70671	85.71321	negative	MGI_C57BL6J_3782661	Nat8f7	NCBI_Gene:100043497,ENSEMBL:ENSMUSG00000089694	MGI:3782661	protein coding gene	N-acetyltransferase 8 (GCN5-related) family member 7
6	pseudogene	85.72192	85.75664	positive	MGI_C57BL6J_3646394	Alms1-ps1	NCBI_Gene:100043493,ENSEMBL:ENSMUSG00000090256	MGI:3646394	pseudogene	ALMS1, centrosome and basal body associated, pseudogene 1
6	gene	85.73251	85.76575	negative	MGI_C57BL6J_2136449	Nat8f3	NCBI_Gene:93674,ENSEMBL:ENSMUSG00000051262	MGI:2136449	protein coding gene	N-acetyltransferase 8 (GCN5-related) family member 3
6	gene	85.74352	85.74361	negative	MGI_C57BL6J_5530699	Gm27317	ENSEMBL:ENSMUSG00000098691	MGI:5530699	miRNA gene	predicted gene, 27317
6	pseudogene	85.77439	85.80406	positive	MGI_C57BL6J_3779593	Alms1-ps2	NCBI_Gene:623273,ENSEMBL:ENSMUSG00000090098	MGI:3779593	pseudogene	ALMS1, centrosome and basal body associated, pseudogene 2
6	gene	85.79014	85.79023	negative	MGI_C57BL6J_5562769	Mir6375	miRBase:MI0021904,NCBI_Gene:102465195,ENSEMBL:ENSMUSG00000105002	MGI:5562769	miRNA gene	microRNA 6375
6	gene	85.80802	85.82095	negative	MGI_C57BL6J_3779382	Nat8f6	NCBI_Gene:100504710,ENSEMBL:ENSMUSG00000079495	MGI:3779382	protein coding gene	N-acetyltransferase 8 (GCN5-related) family member 6
6	gene	85.81722	85.82097	negative	MGI_C57BL6J_1916299	Nat8f5	NCBI_Gene:69049,ENSEMBL:ENSMUSG00000079494	MGI:1916299	protein coding gene	N-acetyltransferase 8 (GCN5-related) family member 5
6	gene	85.83039	85.83749	negative	MGI_C57BL6J_1915646	Nat8	NCBI_Gene:68396,ENSEMBL:ENSMUSG00000030004	MGI:1915646	protein coding gene	N-acetyltransferase 8 (GCN5-related)
6	pseudogene	85.84382	85.84539	positive	MGI_C57BL6J_3704271	Ptges3-ps	NCBI_Gene:100043508,ENSEMBL:ENSMUSG00000040078	MGI:3704271	pseudogene	prostaglandin E synthase 3, pseudogene
6	gene	85.85631	85.86113	positive	MGI_C57BL6J_5621732	Gm38847	NCBI_Gene:105242703	MGI:5621732	lncRNA gene	predicted gene, 38847
6	gene	85.86542	85.86916	negative	MGI_C57BL6J_2136446	Nat8f2	NCBI_Gene:93673,ENSEMBL:ENSMUSG00000033634	MGI:2136446	protein coding gene	N-acetyltransferase 8 (GCN5-related) family member 2
6	pseudogene	85.88932	85.88999	positive	MGI_C57BL6J_5663446	Gm43309	NCBI_Gene:108169194,ENSEMBL:ENSMUSG00000106784	MGI:5663446	pseudogene	predicted gene 43309
6	gene	85.89905	85.90943	negative	MGI_C57BL6J_1922791	Nat8f4	NCBI_Gene:75541,ENSEMBL:ENSMUSG00000068299	MGI:1922791	protein coding gene	N-acetyltransferase 8 (GCN5-related) family member 4
6	gene	85.91015	85.91569	negative	MGI_C57BL6J_1913366	Nat8f1	NCBI_Gene:66116,ENSEMBL:ENSMUSG00000057103	MGI:1913366	protein coding gene	N-acetyltransferase 8 (GCN5-related) family member 1
6	gene	85.91176	85.93028	positive	MGI_C57BL6J_1917036	Tprkb	NCBI_Gene:69786,ENSEMBL:ENSMUSG00000054226	MGI:1917036	protein coding gene	Tp53rk binding protein
6	pseudogene	85.92057	85.92142	negative	MGI_C57BL6J_5010475	Gm18290	NCBI_Gene:100416843,ENSEMBL:ENSMUSG00000106965	MGI:5010475	pseudogene	predicted gene, 18290
6	pseudogene	85.93256	85.93338	negative	MGI_C57BL6J_3644831	Nat8b-ps	NCBI_Gene:434057,ENSEMBL:ENSMUSG00000089634	MGI:3644831	pseudogene	N-acetyltransferase 8B, pseudogene
6	pseudogene	85.93844	85.93922	positive	MGI_C57BL6J_3645071	Gm7542	NCBI_Gene:665213,ENSEMBL:ENSMUSG00000107203	MGI:3645071	pseudogene	predicted gene 7542
6	gene	85.94227	85.96205	negative	MGI_C57BL6J_1919352	Dusp11	NCBI_Gene:72102,ENSEMBL:ENSMUSG00000030002	MGI:1919352	protein coding gene	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
6	gene	85.96162	86.00193	positive	MGI_C57BL6J_5011450	Gm19265	ENSEMBL:ENSMUSG00000107230	MGI:5011450	lncRNA gene	predicted gene, 19265
6	gene	85.98901	86.00350	negative	MGI_C57BL6J_5592478	Gm33319	NCBI_Gene:102636179	MGI:5592478	lncRNA gene	predicted gene, 33319
6	gene	86.00438	86.00935	positive	MGI_C57BL6J_1922605	4930553P18Rik	NCBI_Gene:75355,ENSEMBL:ENSMUSG00000106791	MGI:1922605	lncRNA gene	RIKEN cDNA 4930553P18 gene
6	gene	86.01617	86.02100	positive	MGI_C57BL6J_1349421	Figla	NCBI_Gene:26910,ENSEMBL:ENSMUSG00000030001	MGI:1349421	protein coding gene	folliculogenesis specific basic helix-loop-helix
6	gene	86.02868	86.12441	positive	MGI_C57BL6J_87919	Add2	NCBI_Gene:11519,ENSEMBL:ENSMUSG00000030000	MGI:87919	protein coding gene	adducin 2 (beta)
6	gene	86.03993	86.04177	positive	MGI_C57BL6J_5690482	Gm44090	ENSEMBL:ENSMUSG00000107927	MGI:5690482	unclassified gene	predicted gene, 44090
6	gene	86.08437	86.08708	negative	MGI_C57BL6J_5690481	Gm44089	ENSEMBL:ENSMUSG00000107842	MGI:5690481	lncRNA gene	predicted gene, 44089
6	pseudogene	86.12607	86.14825	positive	MGI_C57BL6J_5011781	Gm19596	NCBI_Gene:100503219,ENSEMBL:ENSMUSG00000107857	MGI:5011781	pseudogene	predicted gene, 19596
6	gene	86.19522	86.27574	positive	MGI_C57BL6J_98724	Tgfa	NCBI_Gene:21802,ENSEMBL:ENSMUSG00000029999	MGI:98724	protein coding gene	transforming growth factor alpha
6	gene	86.26156	86.26391	negative	MGI_C57BL6J_5690309	Gm43917	ENSEMBL:ENSMUSG00000107745	MGI:5690309	unclassified gene	predicted gene, 43917
6	pseudogene	86.28487	86.28610	positive	MGI_C57BL6J_3644882	Gm7545	NCBI_Gene:665233,ENSEMBL:ENSMUSG00000098175	MGI:3644882	pseudogene	predicted gene 7545
6	pseudogene	86.33401	86.33432	positive	MGI_C57BL6J_3704272	Gm10443	NCBI_Gene:100043527,ENSEMBL:ENSMUSG00000072940	MGI:3704272	pseudogene	predicted pseudogene 10443
6	pseudogene	86.35184	86.35298	positive	MGI_C57BL6J_5011047	Gm18862	NCBI_Gene:100417851,ENSEMBL:ENSMUSG00000107819	MGI:5011047	pseudogene	predicted gene, 18862
6	gene	86.36545	86.37006	positive	MGI_C57BL6J_1913738	Fam136a	NCBI_Gene:66488,ENSEMBL:ENSMUSG00000057497	MGI:1913738	protein coding gene	family with sequence similarity 136, member A
6	gene	86.37130	86.37933	positive	MGI_C57BL6J_1915261	Snrpg	NCBI_Gene:68011,ENSEMBL:ENSMUSG00000057278	MGI:1915261	protein coding gene	small nuclear ribonucleoprotein polypeptide G
6	gene	86.37254	86.37529	negative	MGI_C57BL6J_5753517	Gm44941	ENSEMBL:ENSMUSG00000107509	MGI:5753517	lncRNA gene	predicted gene 44941
6	gene	86.38601	86.39716	negative	MGI_C57BL6J_1914131	Pcyox1	NCBI_Gene:66881,ENSEMBL:ENSMUSG00000029998	MGI:1914131	protein coding gene	prenylcysteine oxidase 1
6	gene	86.40389	86.40396	positive	MGI_C57BL6J_4413869	n-TGccc4	NCBI_Gene:102467309	MGI:4413869	tRNA gene	nuclear encoded tRNA glycine 4 (anticodon CCC)
6	gene	86.40422	86.43340	positive	MGI_C57BL6J_107914	Tia1	NCBI_Gene:21841,ENSEMBL:ENSMUSG00000071337	MGI:107914	protein coding gene	cytotoxic granule-associated RNA binding protein 1
6	gene	86.42666	86.44563	positive	MGI_C57BL6J_5753366	Gm44790	ENSEMBL:ENSMUSG00000107539	MGI:5753366	protein coding gene	predicted gene 44790
6	gene	86.43733	86.47350	positive	MGI_C57BL6J_2141787	C87436	NCBI_Gene:232196,ENSEMBL:ENSMUSG00000046679	MGI:2141787	protein coding gene	expressed sequence C87436
6	gene	86.47028	86.48083	negative	MGI_C57BL6J_2444132	A430078I02Rik	NCBI_Gene:320486,ENSEMBL:ENSMUSG00000085589	MGI:2444132	lncRNA gene	RIKEN cDNA A430078I02 gene
6	gene	86.47290	86.47350	positive	MGI_C57BL6J_5621734	Gm38849	NCBI_Gene:105242705	MGI:5621734	lncRNA gene	predicted gene, 38849
6	gene	86.48338	86.48823	negative	MGI_C57BL6J_1916897	2310040G24Rik	NCBI_Gene:381792,ENSEMBL:ENSMUSG00000101655	MGI:1916897	lncRNA gene	RIKEN cDNA 2310040G24 gene
6	gene	86.49322	86.49391	negative	MGI_C57BL6J_5690328	Gm43936	ENSEMBL:ENSMUSG00000107876	MGI:5690328	lncRNA gene	predicted gene, 43936
6	gene	86.49465	86.49780	positive	MGI_C57BL6J_5579426	Gm28720	ENSEMBL:ENSMUSG00000101210	MGI:5579426	lincRNA gene	predicted gene 28720
6	gene	86.49878	86.50054	positive	MGI_C57BL6J_5579425	Gm28719	ENSEMBL:ENSMUSG00000100174	MGI:5579425	lincRNA gene	predicted gene 28719
6	gene	86.51389	86.51627	negative	MGI_C57BL6J_5690778	Gm44386	ENSEMBL:ENSMUSG00000107689	MGI:5690778	lncRNA gene	predicted gene, 44386
6	gene	86.52449	86.52632	negative	MGI_C57BL6J_1345635	Pcbp1	NCBI_Gene:23983,ENSEMBL:ENSMUSG00000051695	MGI:1345635	protein coding gene	poly(rC) binding protein 1
6	gene	86.52625	86.58247	positive	MGI_C57BL6J_1919262	1600020E01Rik	NCBI_Gene:72012,ENSEMBL:ENSMUSG00000097048	MGI:1919262	lncRNA gene	RIKEN cDNA 1600020E01 gene
6	gene	86.52876	86.53121	positive	MGI_C57BL6J_5621561	Gm38676	NCBI_Gene:105242392	MGI:5621561	lncRNA gene	predicted gene, 38676
6	gene	86.57410	86.57416	negative	MGI_C57BL6J_5451961	Gm22184	ENSEMBL:ENSMUSG00000093162	MGI:5451961	miRNA gene	predicted gene, 22184
6	gene	86.59143	86.59360	positive	MGI_C57BL6J_5690761	Gm44369	ENSEMBL:ENSMUSG00000108059	MGI:5690761	unclassified gene	predicted gene, 44369
6	gene	86.60442	86.62786	positive	MGI_C57BL6J_5826600	Gm46963	NCBI_Gene:108169150	MGI:5826600	protein coding gene	predicted gene, 46963
6	gene	86.62816	86.62971	positive	MGI_C57BL6J_1915105	Asprv1	NCBI_Gene:67855,ENSEMBL:ENSMUSG00000033508	MGI:1915105	protein coding gene	aspartic peptidase, retroviral-like 1
6	gene	86.64704	86.66933	negative	MGI_C57BL6J_96908	Mxd1	NCBI_Gene:17119,ENSEMBL:ENSMUSG00000001156	MGI:96908	protein coding gene	MAX dimerization protein 1
6	gene	86.65395	86.66306	negative	MGI_C57BL6J_5621735	Gm38850	NCBI_Gene:105242706	MGI:5621735	lncRNA gene	predicted gene, 38850
6	gene	86.66319	86.66555	negative	MGI_C57BL6J_5690684	Gm44292	ENSEMBL:ENSMUSG00000108291	MGI:5690684	unclassified gene	predicted gene, 44292
6	gene	86.67515	86.68452	negative	MGI_C57BL6J_1913868	Snrnp27	NCBI_Gene:66618,ENSEMBL:ENSMUSG00000001158	MGI:1913868	protein coding gene	small nuclear ribonucleoprotein 27 (U4/U6.U5)
6	gene	86.68782	86.68843	negative	MGI_C57BL6J_5690606	Gm44214	ENSEMBL:ENSMUSG00000108197	MGI:5690606	lncRNA gene	predicted gene, 44214
6	gene	86.69177	86.73340	negative	MGI_C57BL6J_1345156	Gmcl1	NCBI_Gene:23885,ENSEMBL:ENSMUSG00000001157	MGI:1345156	protein coding gene	germ cell-less, spermatogenesis associated 1
6	gene	86.73349	86.73707	positive	MGI_C57BL6J_5690428	Gm44036	ENSEMBL:ENSMUSG00000107961	MGI:5690428	lncRNA gene	predicted gene, 44036
6	gene	86.73684	86.79359	negative	MGI_C57BL6J_88030	Anxa4	NCBI_Gene:11746,ENSEMBL:ENSMUSG00000029994	MGI:88030	protein coding gene	annexin A4
6	gene	86.84840	86.84944	negative	MGI_C57BL6J_1914420	2610306M01Rik	NCBI_Gene:67170,ENSEMBL:ENSMUSG00000100164	MGI:1914420	lncRNA gene	RIKEN cDNA 2610306M01 gene
6	gene	86.84948	87.00323	positive	MGI_C57BL6J_1098687	Aak1	NCBI_Gene:269774,ENSEMBL:ENSMUSG00000057230	MGI:1098687	protein coding gene	AP2 associated kinase 1
6	gene	86.86287	86.86445	positive	MGI_C57BL6J_5690545	Gm44153	ENSEMBL:ENSMUSG00000108216	MGI:5690545	unclassified gene	predicted gene, 44153
6	gene	86.87379	86.87548	positive	MGI_C57BL6J_5690544	Gm44152	ENSEMBL:ENSMUSG00000108152	MGI:5690544	unclassified gene	predicted gene, 44152
6	gene	86.96164	86.96344	positive	MGI_C57BL6J_5690485	Gm44093	ENSEMBL:ENSMUSG00000107576	MGI:5690485	unclassified gene	predicted gene, 44093
6	gene	86.97653	86.97718	positive	MGI_C57BL6J_5690483	Gm44091	ENSEMBL:ENSMUSG00000107688	MGI:5690483	lncRNA gene	predicted gene, 44091
6	gene	86.99498	87.00323	positive	MGI_C57BL6J_5621380	Gm38495	NCBI_Gene:102637099	MGI:5621380	protein coding gene	predicted gene, 38495
6	gene	87.00924	87.02846	positive	MGI_C57BL6J_1913290	Nfu1	NCBI_Gene:56748,ENSEMBL:ENSMUSG00000029993	MGI:1913290	protein coding gene	NFU1 iron-sulfur cluster scaffold
6	gene	87.04285	87.09221	positive	MGI_C57BL6J_95698	Gfpt1	NCBI_Gene:14583,ENSEMBL:ENSMUSG00000029992	MGI:95698	protein coding gene	glutamine fructose-6-phosphate transaminase 1
6	gene	87.10046	87.11300	positive	MGI_C57BL6J_1261919	D6Ertd527e	NCBI_Gene:52372,ENSEMBL:ENSMUSG00000090891	MGI:1261919	protein coding gene	DNA segment, Chr 6, ERATO Doi 527, expressed
6	gene	87.12704	87.13274	negative	MGI_C57BL6J_5623267	Gm40382	NCBI_Gene:105244848	MGI:5623267	lncRNA gene	predicted gene, 40382
6	gene	87.13385	87.33582	negative	MGI_C57BL6J_1916788	Antxr1	NCBI_Gene:69538,ENSEMBL:ENSMUSG00000033420	MGI:1916788	protein coding gene	anthrax toxin receptor 1
6	gene	87.13874	87.14085	negative	MGI_C57BL6J_5690807	Gm44415	ENSEMBL:ENSMUSG00000108195	MGI:5690807	unclassified gene	predicted gene, 44415
6	gene	87.17194	87.17401	negative	MGI_C57BL6J_5690808	Gm44416	ENSEMBL:ENSMUSG00000107436	MGI:5690808	unclassified gene	predicted gene, 44416
6	gene	87.22125	87.26745	positive	MGI_C57BL6J_5621736	Gm38851	NCBI_Gene:105242708	MGI:5621736	lncRNA gene	predicted gene, 38851
6	gene	87.25225	87.25561	negative	MGI_C57BL6J_5690809	Gm44417	ENSEMBL:ENSMUSG00000107865	MGI:5690809	unclassified gene	predicted gene, 44417
6	gene	87.27774	87.27975	positive	MGI_C57BL6J_5690810	Gm44418	ENSEMBL:ENSMUSG00000108006	MGI:5690810	lncRNA gene	predicted gene, 44418
6	gene	87.28115	87.28126	positive	MGI_C57BL6J_4422028	n-R5s164	ENSEMBL:ENSMUSG00000084613	MGI:4422028	rRNA gene	nuclear encoded rRNA 5S 164
6	gene	87.28277	87.28545	positive	MGI_C57BL6J_5593329	Gm34170	NCBI_Gene:102637331	MGI:5593329	lncRNA gene	predicted gene, 34170
6	gene	87.32156	87.32234	negative	MGI_C57BL6J_1924658	9530013L04Rik	ENSEMBL:ENSMUSG00000107780	MGI:1924658	unclassified gene	RIKEN cDNA 9530013L04 gene
6	gene	87.32307	87.33204	negative	MGI_C57BL6J_5593249	Gm34090	NCBI_Gene:102637221	MGI:5593249	lncRNA gene	predicted gene, 34090
6	gene	87.33275	87.33486	negative	MGI_C57BL6J_5690806	Gm44414	ENSEMBL:ENSMUSG00000108143	MGI:5690806	unclassified gene	predicted gene, 44414
6	gene	87.34565	87.35094	negative	MGI_C57BL6J_1913533	Gkn1	NCBI_Gene:66283,ENSEMBL:ENSMUSG00000030050	MGI:1913533	protein coding gene	gastrokine 1
6	gene	87.37336	87.37950	positive	MGI_C57BL6J_1913534	Gkn2	NCBI_Gene:66284,ENSEMBL:ENSMUSG00000030049	MGI:1913534	protein coding gene	gastrokine 2
6	gene	87.38326	87.38894	negative	MGI_C57BL6J_1916138	Gkn3	NCBI_Gene:68888,ENSEMBL:ENSMUSG00000030048	MGI:1916138	protein coding gene	gastrokine 3
6	gene	87.42899	87.43768	positive	MGI_C57BL6J_1338820	Bmp10	NCBI_Gene:12154,ENSEMBL:ENSMUSG00000030046	MGI:1338820	protein coding gene	bone morphogenetic protein 10
6	gene	87.45854	87.53326	negative	MGI_C57BL6J_2443687	Arhgap25	NCBI_Gene:232201,ENSEMBL:ENSMUSG00000030047	MGI:2443687	protein coding gene	Rho GTPase activating protein 25
6	gene	87.53341	87.53604	positive	MGI_C57BL6J_5690590	Gm44198	ENSEMBL:ENSMUSG00000108184	MGI:5690590	unclassified gene	predicted gene, 44198
6	gene	87.57859	87.59077	negative	MGI_C57BL6J_1929676	Prokr1	NCBI_Gene:58182,ENSEMBL:ENSMUSG00000049409	MGI:1929676	protein coding gene	prokineticin receptor 1
6	gene	87.58185	87.58780	positive	MGI_C57BL6J_5593381	Gm34222	NCBI_Gene:102637405	MGI:5593381	lncRNA gene	predicted gene, 34222
6	gene	87.59756	87.59919	positive	MGI_C57BL6J_5593471	Gm34312	NCBI_Gene:102637526,ENSEMBL:ENSMUSG00000108118	MGI:5593471	lncRNA gene	predicted gene, 34312
6	gene	87.62842	87.67220	negative	MGI_C57BL6J_1919353	Aplf	NCBI_Gene:72103,ENSEMBL:ENSMUSG00000030051	MGI:1919353	protein coding gene	aprataxin and PNKP like factor
6	gene	87.63699	87.63984	positive	MGI_C57BL6J_5826601	Gm46964	NCBI_Gene:108169151	MGI:5826601	lncRNA gene	predicted gene, 46964
6	gene	87.65109	87.65370	negative	MGI_C57BL6J_5621737	Gm38852	NCBI_Gene:105242709	MGI:5621737	lncRNA gene	predicted gene, 38852
6	gene	87.65775	87.66382	positive	MGI_C57BL6J_5690489	Gm44097	ENSEMBL:ENSMUSG00000107593	MGI:5690489	lncRNA gene	predicted gene, 44097
6	pseudogene	87.67198	87.68109	positive	MGI_C57BL6J_2443140	E230015B07Rik	NCBI_Gene:320001,ENSEMBL:ENSMUSG00000071332	MGI:2443140	pseudogene	RIKEN cDNA E230015B07 gene
6	gene	87.67559	87.72280	negative	MGI_C57BL6J_3586838	1810020O05Rik	NCBI_Gene:613264,ENSEMBL:ENSMUSG00000089997	MGI:3586838	lncRNA gene	Riken cDNA 1810020O05 gene
6	gene	87.72996	87.73115	negative	MGI_C57BL6J_5690602	Gm44210	ENSEMBL:ENSMUSG00000108079	MGI:5690602	lncRNA gene	predicted gene, 44210
6	gene	87.73082	87.76242	positive	MGI_C57BL6J_3611451	Efcc1	NCBI_Gene:58229,ENSEMBL:ENSMUSG00000068263	MGI:3611451	protein coding gene	EF hand and coiled-coil domain containing 1
6	gene	87.74104	87.74919	negative	MGI_C57BL6J_5593573	Gm34414	NCBI_Gene:102637660	MGI:5593573	lncRNA gene	predicted gene, 34414
6	pseudogene	87.76488	87.76698	negative	MGI_C57BL6J_3647624	Gm5879	NCBI_Gene:545864,ENSEMBL:ENSMUSG00000068262	MGI:3647624	pseudogene	predicted gene 5879
6	gene	87.77612	87.77979	positive	MGI_C57BL6J_1860137	Gp9	NCBI_Gene:54368,ENSEMBL:ENSMUSG00000030054	MGI:1860137	protein coding gene	glycoprotein 9 (platelet)
6	gene	87.77614	87.77748	positive	MGI_C57BL6J_5690296	Gm43904	ENSEMBL:ENSMUSG00000107849	MGI:5690296	lncRNA gene	predicted gene, 43904
6	gene	87.78885	87.81216	negative	MGI_C57BL6J_1917084	Rab43	NCBI_Gene:69834,ENSEMBL:ENSMUSG00000030055	MGI:1917084	protein coding gene	RAB43, member RAS oncogene family
6	gene	87.78886	87.83580	negative	MGI_C57BL6J_5753716	Gm45140	ENSEMBL:ENSMUSG00000107928	MGI:5753716	protein coding gene	predicted gene 45140
6	gene	87.79607	87.79923	negative	MGI_C57BL6J_5690815	Gm44423	ENSEMBL:ENSMUSG00000108064	MGI:5690815	unclassified gene	predicted gene, 44423
6	gene	87.80547	87.80634	negative	MGI_C57BL6J_1924996	9930120I10Rik	ENSEMBL:ENSMUSG00000108120	MGI:1924996	unclassified gene	RIKEN cDNA 9930120I10 gene
6	gene	87.81427	87.83880	negative	MGI_C57BL6J_1923310	Isy1	NCBI_Gene:57905,ENSEMBL:ENSMUSG00000030056	MGI:1923310	protein coding gene	ISY1 splicing factor homolog
6	gene	87.83027	87.83287	negative	MGI_C57BL6J_2442518	B130021K23Rik	ENSEMBL:ENSMUSG00000108042	MGI:2442518	unclassified gene	RIKEN cDNA B130021K23 gene
6	gene	87.84261	87.85111	negative	MGI_C57BL6J_88431	Cnbp	NCBI_Gene:12785,ENSEMBL:ENSMUSG00000030057	MGI:88431	protein coding gene	cellular nucleic acid binding protein
6	gene	87.85121	87.85229	positive	MGI_C57BL6J_5690456	Gm44064	ENSEMBL:ENSMUSG00000107798	MGI:5690456	unclassified gene	predicted gene, 44064
6	gene	87.88781	87.91360	positive	MGI_C57BL6J_1858696	Copg1	NCBI_Gene:54161,ENSEMBL:ENSMUSG00000030058	MGI:1858696	protein coding gene	coatomer protein complex, subunit gamma 1
6	gene	87.90884	87.91446	negative	MGI_C57BL6J_5477130	Gm26636	ENSEMBL:ENSMUSG00000097763	MGI:5477130	lncRNA gene	predicted gene, 26636
6	gene	87.91391	87.93663	positive	MGI_C57BL6J_1914053	Hmces	NCBI_Gene:232210,ENSEMBL:ENSMUSG00000030060	MGI:1914053	protein coding gene	5-hydroxymethylcytosine (hmC) binding, ES cell specific
6	pseudogene	87.92887	87.93028	negative	MGI_C57BL6J_5011223	Gm19038	NCBI_Gene:100418152	MGI:5011223	pseudogene	predicted gene, 19038
6	pseudogene	87.94844	87.94944	negative	MGI_C57BL6J_3641929	Rps19-ps9	NCBI_Gene:665416,ENSEMBL:ENSMUSG00000068689	MGI:3641929	pseudogene	ribosomal protein S19, pseudogene 9
6	gene	87.98042	87.98164	negative	MGI_C57BL6J_2685307	H1f10	NCBI_Gene:243529,ENSEMBL:ENSMUSG00000044927	MGI:2685307	protein coding gene	H1.10 linker histone
6	gene	87.98088	88.00547	positive	MGI_C57BL6J_3648213	Gm5577	NCBI_Gene:434064,ENSEMBL:ENSMUSG00000084950	MGI:3648213	lncRNA gene	predicted gene 5577
6	gene	87.98161	87.98174	negative	MGI_C57BL6J_6096137	Gm47286	ENSEMBL:ENSMUSG00000106591	MGI:6096137	miRNA gene	predicted gene, 47286
6	gene	87.98619	87.98973	positive	MGI_C57BL6J_5690560	Gm44168	ENSEMBL:ENSMUSG00000108049	MGI:5690560	unclassified gene	predicted gene, 44168
6	gene	87.99314	87.99418	negative	MGI_C57BL6J_1921328	4933412L11Rik	ENSEMBL:ENSMUSG00000108227	MGI:1921328	unclassified gene	RIKEN cDNA 4933412L11 gene
6	gene	87.99911	88.04527	negative	MGI_C57BL6J_105068	Rab7	NCBI_Gene:19349,ENSEMBL:ENSMUSG00000079477	MGI:105068	protein coding gene	RAB7, member RAS oncogene family
6	gene	88.00520	88.01065	positive	MGI_C57BL6J_5594031	Gm34872	NCBI_Gene:102638270	MGI:5594031	lncRNA gene	predicted gene, 34872
6	gene	88.04054	88.04247	negative	MGI_C57BL6J_5690579	Gm44187	ENSEMBL:ENSMUSG00000108268	MGI:5690579	unclassified gene	predicted gene, 44187
6	gene	88.04814	88.05384	negative	MGI_C57BL6J_5621740	Gm38855	NCBI_Gene:105242712	MGI:5621740	lncRNA gene	predicted gene, 38855
6	gene	88.08447	88.10530	positive	MGI_C57BL6J_98084	Rpn1	NCBI_Gene:103963,ENSEMBL:ENSMUSG00000030062	MGI:98084	protein coding gene	ribophorin I
6	gene	88.10413	88.10426	negative	MGI_C57BL6J_5531160	Mir6376	miRBase:MI0021905,NCBI_Gene:102465196,ENSEMBL:ENSMUSG00000099095	MGI:5531160	miRNA gene	microRNA 6376
6	gene	88.14185	88.19828	negative	MGI_C57BL6J_5621593	Gm38708	NCBI_Gene:105242443,ENSEMBL:ENSMUSG00000108010	MGI:5621593	lncRNA gene	predicted gene, 38708
6	gene	88.15156	88.15500	positive	MGI_C57BL6J_5621741	Gm38856	NCBI_Gene:105242713	MGI:5621741	lncRNA gene	predicted gene, 38856
6	gene	88.19344	88.20703	positive	MGI_C57BL6J_95662	Gata2	NCBI_Gene:14461,ENSEMBL:ENSMUSG00000015053	MGI:95662	protein coding gene	GATA binding protein 2
6	gene	88.21625	88.21650	negative	MGI_C57BL6J_5690780	Gm44388	ENSEMBL:ENSMUSG00000107776	MGI:5690780	unclassified gene	predicted gene, 44388
6	gene	88.22227	88.25441	positive	MGI_C57BL6J_1922801	Dnajb8	NCBI_Gene:56691,ENSEMBL:ENSMUSG00000048206	MGI:1922801	protein coding gene	DnaJ heat shock protein family (Hsp40) member B8
6	gene	88.22260	88.22568	negative	MGI_C57BL6J_1920567	1700031F10Rik	ENSEMBL:ENSMUSG00000047046	MGI:1920567	lncRNA gene	RIKEN cDNA 1700031F10 gene
6	gene	88.25733	88.44656	negative	MGI_C57BL6J_2137092	Eefsec	NCBI_Gene:65967,ENSEMBL:ENSMUSG00000033216	MGI:2137092	protein coding gene	eukaryotic elongation factor, selenocysteine-tRNA-specific
6	gene	88.35314	88.35361	negative	MGI_C57BL6J_5690657	Gm44265	ENSEMBL:ENSMUSG00000107472	MGI:5690657	lncRNA gene	predicted gene, 44265
6	gene	88.40598	88.40630	positive	MGI_C57BL6J_5454955	Gm25178	ENSEMBL:ENSMUSG00000084582	MGI:5454955	unclassified non-coding RNA gene	predicted gene, 25178
6	gene	88.44569	88.44651	positive	MGI_C57BL6J_5690656	Gm44264	ENSEMBL:ENSMUSG00000107561	MGI:5690656	lncRNA gene	predicted gene, 44264
6	gene	88.46541	88.49757	positive	MGI_C57BL6J_1928760	Ruvbl1	NCBI_Gene:56505,ENSEMBL:ENSMUSG00000030079	MGI:1928760	protein coding gene	RuvB-like protein 1
6	gene	88.49162	88.49640	positive	MGI_C57BL6J_5826602	Gm46965	NCBI_Gene:108169152	MGI:5826602	protein coding gene	predicted gene, 46965
6	gene	88.50358	88.51891	negative	MGI_C57BL6J_1858417	Sec61a1	NCBI_Gene:53421,ENSEMBL:ENSMUSG00000030082	MGI:1858417	protein coding gene	Sec61 alpha 1 subunit (S. cerevisiae)
6	gene	88.50360	88.50428	positive	MGI_C57BL6J_5690562	Gm44170	ENSEMBL:ENSMUSG00000107659	MGI:5690562	lncRNA gene	predicted gene, 44170
6	gene	88.51901	88.52001	positive	MGI_C57BL6J_5690822	Gm44430	ENSEMBL:ENSMUSG00000107698	MGI:5690822	unclassified gene	predicted gene, 44430
6	gene	88.54511	88.63795	negative	MGI_C57BL6J_1918481	Kbtbd12	NCBI_Gene:74589,ENSEMBL:ENSMUSG00000033182	MGI:1918481	protein coding gene	kelch repeat and BTB (POZ) domain containing 12
6	gene	88.71642	88.72734	negative	MGI_C57BL6J_5477082	Gm26588	NCBI_Gene:102639841,ENSEMBL:ENSMUSG00000097730	MGI:5477082	lncRNA gene	predicted gene, 26588
6	gene	88.72441	88.82836	positive	MGI_C57BL6J_1346042	Mgll	NCBI_Gene:23945,ENSEMBL:ENSMUSG00000033174	MGI:1346042	protein coding gene	monoglyceride lipase
6	gene	88.73819	88.74136	positive	MGI_C57BL6J_5690397	Gm44005	ENSEMBL:ENSMUSG00000107624	MGI:5690397	unclassified gene	predicted gene, 44005
6	gene	88.73861	88.74419	negative	MGI_C57BL6J_5621744	Gm38859	NCBI_Gene:105242716	MGI:5621744	lncRNA gene	predicted gene, 38859
6	gene	88.74273	88.74562	positive	MGI_C57BL6J_5690391	Gm43999	ENSEMBL:ENSMUSG00000107835	MGI:5690391	unclassified gene	predicted gene, 43999
6	gene	88.78433	88.78745	negative	MGI_C57BL6J_5690329	Gm43937	ENSEMBL:ENSMUSG00000107719	MGI:5690329	unclassified gene	predicted gene, 43937
6	gene	88.80224	88.80602	positive	MGI_C57BL6J_5690393	Gm44001	ENSEMBL:ENSMUSG00000107966	MGI:5690393	unclassified gene	predicted gene, 44001
6	gene	88.83591	88.84238	negative	MGI_C57BL6J_1933148	Abtb1	NCBI_Gene:80283,ENSEMBL:ENSMUSG00000030083	MGI:1933148	protein coding gene	ankyrin repeat and BTB (POZ) domain containing 1
6	gene	88.84256	88.87505	negative	MGI_C57BL6J_2442488	Podxl2	NCBI_Gene:319655,ENSEMBL:ENSMUSG00000033152	MGI:2442488	protein coding gene	podocalyxin-like 2
6	gene	88.84285	88.84727	positive	MGI_C57BL6J_3641714	Gm15612	NCBI_Gene:100038356,ENSEMBL:ENSMUSG00000085828	MGI:3641714	lncRNA gene	predicted gene 15612
6	pseudogene	88.88265	88.88318	positive	MGI_C57BL6J_5595348	Gm36189	ENSEMBL:ENSMUSG00000107432	MGI:5595348	pseudogene	predicted gene, 36189
6	gene	88.88347	88.89878	negative	MGI_C57BL6J_105380	Mcm2	NCBI_Gene:17216,ENSEMBL:ENSMUSG00000002870	MGI:105380	protein coding gene	minichromosome maintenance complex component 2
6	gene	88.90225	88.91224	positive	MGI_C57BL6J_1345190	Tpra1	NCBI_Gene:24100,ENSEMBL:ENSMUSG00000002871	MGI:1345190	protein coding gene	transmembrane protein, adipocyte asscociated 1
6	gene	88.91479	88.91710	negative	MGI_C57BL6J_5595427	Gm36268	NCBI_Gene:102640127	MGI:5595427	lncRNA gene	predicted gene, 36268
6	gene	88.91971	88.92264	positive	MGI_C57BL6J_5690570	Gm44178	ENSEMBL:ENSMUSG00000107676	MGI:5690570	unclassified gene	predicted gene, 44178
6	gene	88.93992	88.94648	positive	MGI_C57BL6J_5595513	Gm36354	NCBI_Gene:102640238	MGI:5595513	lncRNA gene	predicted gene, 36354
6	gene	88.95068	89.11004	positive	MGI_C57BL6J_3026922	4933427D06Rik	NCBI_Gene:232217,ENSEMBL:ENSMUSG00000055403	MGI:3026922	lncRNA gene	RIKEN cDNA 4933427D06 gene
6	gene	88.96465	88.97389	negative	MGI_C57BL6J_5595568	Gm36409	NCBI_Gene:102640310	MGI:5595568	lncRNA gene	predicted gene, 36409
6	gene	88.99798	89.00046	positive	MGI_C57BL6J_5595664	Gm36505	NCBI_Gene:102640445	MGI:5595664	lncRNA gene	predicted gene, 36505
6	gene	89.02384	89.02591	positive	MGI_C57BL6J_5595798	Gm36639	NCBI_Gene:102640620	MGI:5595798	lncRNA gene	predicted gene, 36639
6	gene	89.14099	89.14739	positive	MGI_C57BL6J_3584270	Gm1965	NCBI_Gene:434065,ENSEMBL:ENSMUSG00000090254	MGI:3584270	lncRNA gene	predicted gene 1965
6	gene	89.18458	89.18603	negative	MGI_C57BL6J_3645279	Gm6507	NCBI_Gene:101056056,ENSEMBL:ENSMUSG00000090013	MGI:3645279	lncRNA gene	predicted gene 6507
6	pseudogene	89.20125	89.20156	positive	MGI_C57BL6J_5690595	Gm44203	ENSEMBL:ENSMUSG00000108221	MGI:5690595	pseudogene	predicted gene, 44203
6	gene	89.21116	89.21624	negative	MGI_C57BL6J_2685685	Gm839	NCBI_Gene:330379,ENSEMBL:ENSMUSG00000060416	MGI:2685685	lncRNA gene	predicted gene 839
6	gene	89.24947	89.24960	negative	MGI_C57BL6J_5455738	Gm25961	ENSEMBL:ENSMUSG00000087799	MGI:5455738	rRNA gene	predicted gene, 25961
6	gene	89.25782	89.25914	negative	MGI_C57BL6J_5690596	Gm44204	ENSEMBL:ENSMUSG00000107732	MGI:5690596	lncRNA gene	predicted gene, 44204
6	gene	89.26951	89.28572	negative	MGI_C57BL6J_1922381	4930512J16Rik	NCBI_Gene:75131,ENSEMBL:ENSMUSG00000107622	MGI:1922381	lncRNA gene	RIKEN cDNA 4930512J16 gene
6	gene	89.27330	89.27633	positive	MGI_C57BL6J_5595894	Gm36735	NCBI_Gene:102640739	MGI:5595894	lncRNA gene	predicted gene, 36735
6	gene	89.30463	89.32762	positive	MGI_C57BL6J_5477305	Gm26811	ENSEMBL:ENSMUSG00000097816	MGI:5477305	lncRNA gene	predicted gene, 26811
6	gene	89.31631	89.36262	negative	MGI_C57BL6J_107685	Plxna1	NCBI_Gene:18844,ENSEMBL:ENSMUSG00000030084	MGI:107685	protein coding gene	plexin A1
6	gene	89.34514	89.34656	positive	MGI_C57BL6J_5690599	Gm44207	ENSEMBL:ENSMUSG00000107570	MGI:5690599	unclassified gene	predicted gene, 44207
6	gene	89.36136	89.36240	positive	MGI_C57BL6J_5623300	Gm40415	NCBI_Gene:105244887	MGI:5623300	protein coding gene	predicted gene, 40415
6	gene	89.38315	89.59565	negative	MGI_C57BL6J_1913348	Chchd6	NCBI_Gene:66098,ENSEMBL:ENSMUSG00000030086	MGI:1913348	protein coding gene	coiled-coil-helix-coiled-coil-helix domain containing 6
6	gene	89.45286	89.46738	positive	MGI_C57BL6J_5826603	Gm46966	NCBI_Gene:108169153	MGI:5826603	lncRNA gene	predicted gene, 46966
6	gene	89.52684	89.52746	negative	MGI_C57BL6J_5690295	Gm43903	ENSEMBL:ENSMUSG00000107680	MGI:5690295	unclassified gene	predicted gene, 43903
6	pseudogene	89.59930	89.59967	negative	MGI_C57BL6J_5012081	Gm19896	NCBI_Gene:100503789	MGI:5012081	pseudogene	predicted gene, 19896
6	gene	89.64399	89.67553	positive	MGI_C57BL6J_2386711	Txnrd3	NCBI_Gene:232223,ENSEMBL:ENSMUSG00000000811	MGI:2386711	protein coding gene	thioredoxin reductase 3
6	pseudogene	89.69866	89.69952	negative	MGI_C57BL6J_2148531	Vmn1r-ps25	NCBI_Gene:113869,ENSEMBL:ENSMUSG00000100128	MGI:2148531	pseudogene	vomeronasal 1 receptor, pseudogene 25
6	gene	89.70754	89.71666	positive	MGI_C57BL6J_2148518	Vmn1r40	NCBI_Gene:113855,ENSEMBL:ENSMUSG00000096051	MGI:2148518	protein coding gene	vomeronasal 1 receptor 40
6	gene	89.74077	89.74765	positive	MGI_C57BL6J_2148520	Vmn1r41	NCBI_Gene:113857,ENSEMBL:ENSMUSG00000094586	MGI:2148520	protein coding gene	vomeronasal 1 receptor 41
6	pseudogene	89.78945	89.79041	positive	MGI_C57BL6J_2148532	Vmn1r-ps26	NCBI_Gene:113870,ENSEMBL:ENSMUSG00000092311	MGI:2148532	pseudogene	vomeronasal 1 receptor, pseudogene 26
6	pseudogene	89.80283	89.80610	negative	MGI_C57BL6J_2148533	Vmn1r-ps27	NCBI_Gene:113871,ENSEMBL:ENSMUSG00000092237	MGI:2148533	pseudogene	vomeronasal 1 receptor, pseudogene 27
6	gene	89.84257	89.87641	negative	MGI_C57BL6J_2148511	Vmn1r42	NCBI_Gene:113848,ENSEMBL:ENSMUSG00000068232	MGI:2148511	protein coding gene	vomeronasal 1 receptor 42
6	gene	89.85893	89.87641	negative	MGI_C57BL6J_2148510	Vmn1r43	NCBI_Gene:113847,ENSEMBL:ENSMUSG00000068231	MGI:2148510	protein coding gene	vomeronasal 1 receptor 43
6	gene	89.88366	89.89489	positive	MGI_C57BL6J_2148517	Vmn1r44	NCBI_Gene:113854,ENSEMBL:ENSMUSG00000068234	MGI:2148517	protein coding gene	vomeronasal 1 receptor 44
6	pseudogene	89.90768	89.90862	positive	MGI_C57BL6J_2148534	Vmn1r-ps28	NCBI_Gene:113872,ENSEMBL:ENSMUSG00000092228	MGI:2148534	pseudogene	vomeronasal 1 receptor, pseudogene 28
6	gene	89.93165	89.94060	negative	MGI_C57BL6J_1333762	Vmn1r45	NCBI_Gene:22297,ENSEMBL:ENSMUSG00000044248	MGI:1333762	protein coding gene	vomeronasal 1 receptor 45
6	gene	89.96930	89.98672	positive	MGI_C57BL6J_2148519	Vmn1r46	NCBI_Gene:113856,ENSEMBL:ENSMUSG00000061653	MGI:2148519	protein coding gene	vomeronasal 1 receptor 46
6	pseudogene	89.99761	90.00459	positive	MGI_C57BL6J_3852367	Vmn1r-ps29	NCBI_Gene:100312490,ENSEMBL:ENSMUSG00000092303	MGI:3852367	pseudogene	vomeronasal 1 receptor, pseudogene 29
6	gene	90.01615	90.02748	positive	MGI_C57BL6J_2148509	Vmn1r47	NCBI_Gene:113846,ENSEMBL:ENSMUSG00000060724	MGI:2148509	protein coding gene	vomeronasal 1 receptor 47
6	gene	90.03593	90.03684	negative	MGI_C57BL6J_2148508	Vmn1r48	NCBI_Gene:113845,ENSEMBL:ENSMUSG00000057592	MGI:2148508	protein coding gene	vomeronasal 1 receptor 48
6	pseudogene	90.05641	90.05669	negative	MGI_C57BL6J_3852370	Vmn1r-ps31	NCBI_Gene:100312492,ENSEMBL:ENSMUSG00000092450	MGI:3852370	pseudogene	vomeronasal 1 receptor, pseudogene 31
6	pseudogene	90.05663	90.05680	positive	MGI_C57BL6J_5141999	Gm20534	ENSEMBL:ENSMUSG00000092588	MGI:5141999	pseudogene	predicted gene 20534
6	gene	90.07189	90.07851	negative	MGI_C57BL6J_1344384	Vmn1r49	NCBI_Gene:24112,ENSEMBL:ENSMUSG00000095932	MGI:1344384	protein coding gene	vomeronasal 1, receptor 49
6	gene	90.10143	90.10911	positive	MGI_C57BL6J_2148515	Vmn1r50	NCBI_Gene:113852,ENSEMBL:ENSMUSG00000094553	MGI:2148515	protein coding gene	vomeronasal 1 receptor 50
6	gene	90.12260	90.13226	positive	MGI_C57BL6J_1333759	Vmn1r51	NCBI_Gene:22296,ENSEMBL:ENSMUSG00000062818	MGI:1333759	protein coding gene	vomeronasal 1 receptor 51
6	pseudogene	90.13037	90.23365	negative	MGI_C57BL6J_5141891	Gm20426	NCBI_Gene:108169154,ENSEMBL:ENSMUSG00000092247	MGI:5141891	pseudogene	predicted gene 20426
6	pseudogene	90.14643	90.15564	positive	MGI_C57BL6J_3646782	Vmn1r-ps32	NCBI_Gene:625050,ENSEMBL:ENSMUSG00000061843	MGI:3646782	pseudogene	vomeronasal 1 receptor, pseudogene 32
6	gene	90.17481	90.18125	positive	MGI_C57BL6J_2148512	Vmn1r52	NCBI_Gene:113849,ENSEMBL:ENSMUSG00000060816	MGI:2148512	protein coding gene	vomeronasal 1 receptor 52
6	gene	90.20279	90.20368	positive	MGI_C57BL6J_2148513	V1ra8	NCBI_Gene:113850,ENSEMBL:ENSMUSG00000062546	MGI:2148513	protein coding gene	vomeronasal 1 receptor, A8
6	gene	90.22332	90.22444	negative	MGI_C57BL6J_2148516	Vmn1r53	NCBI_Gene:113853,ENSEMBL:ENSMUSG00000057697	MGI:2148516	protein coding gene	vomeronasal 1 receptor 53
6	pseudogene	90.23569	90.23627	positive	MGI_C57BL6J_3782465	Gm4287	NCBI_Gene:100043191,ENSEMBL:ENSMUSG00000092552	MGI:3782465	pseudogene	predicted gene 4287
6	pseudogene	90.24227	90.24324	positive	MGI_C57BL6J_2148535	Vmn1r-ps34	NCBI_Gene:113873,ENSEMBL:ENSMUSG00000099754	MGI:2148535	pseudogene	vomeronasal 1 receptor, pseudogene 34
6	gene	90.24630	90.27121	positive	MGI_C57BL6J_2148514	Vmn1r54	NCBI_Gene:113851,ENSEMBL:ENSMUSG00000047203	MGI:2148514	protein coding gene	vomeronasal 1 receptor 54
6	gene	90.29622	90.29933	positive	MGI_C57BL6J_5690283	Gm43891	ENSEMBL:ENSMUSG00000108119	MGI:5690283	unclassified gene	predicted gene, 43891
6	gene	90.30122	90.30545	positive	MGI_C57BL6J_2679261	BC048671	NCBI_Gene:243535,ENSEMBL:ENSMUSG00000049694	MGI:2679261	protein coding gene	cDNA sequence BC048671
6	gene	90.30835	90.32519	negative	MGI_C57BL6J_1919047	Chst13	NCBI_Gene:71797,ENSEMBL:ENSMUSG00000056643	MGI:1919047	protein coding gene	carbohydrate sulfotransferase 13
6	gene	90.33324	90.36455	positive	MGI_C57BL6J_2385332	Uroc1	NCBI_Gene:243537,ENSEMBL:ENSMUSG00000034456	MGI:2385332	protein coding gene	urocanase domain containing 1
6	gene	90.36948	90.40349	positive	MGI_C57BL6J_1933108	Zxdc	NCBI_Gene:80292,ENSEMBL:ENSMUSG00000034430	MGI:1933108	protein coding gene	ZXD family zinc finger C
6	gene	90.38681	90.38936	positive	MGI_C57BL6J_1924668	C030015A19Rik	ENSEMBL:ENSMUSG00000108181	MGI:1924668	unclassified gene	RIKEN cDNA C030015A19 gene
6	gene	90.40348	90.42977	negative	MGI_C57BL6J_2141635	Cfap100	NCBI_Gene:243538,ENSEMBL:ENSMUSG00000048794	MGI:2141635	protein coding gene	cilia and flagella associated protein 100
6	gene	90.45971	90.46147	negative	MGI_C57BL6J_5690509	Gm44117	ENSEMBL:ENSMUSG00000107605	MGI:5690509	lncRNA gene	predicted gene, 44117
6	gene	90.46255	90.47917	positive	MGI_C57BL6J_1929988	Klf15	NCBI_Gene:66277,ENSEMBL:ENSMUSG00000030087	MGI:1929988	protein coding gene	Kruppel-like factor 15
6	gene	90.47847	90.47969	positive	MGI_C57BL6J_5690813	Gm44421	ENSEMBL:ENSMUSG00000107451	MGI:5690813	lncRNA gene	predicted gene, 44421
6	gene	90.48639	90.51948	positive	MGI_C57BL6J_5805016	Gm45901	ENSEMBL:ENSMUSG00000108111	MGI:5805016	lncRNA gene	predicted gene 45901
6	gene	90.48643	90.60020	positive	MGI_C57BL6J_1340024	Aldh1l1	NCBI_Gene:107747,ENSEMBL:ENSMUSG00000030088	MGI:1340024	protein coding gene	aldehyde dehydrogenase 1 family, member L1
6	gene	90.51330	90.51381	positive	MGI_C57BL6J_5690628	Gm44236	ENSEMBL:ENSMUSG00000108271	MGI:5690628	unclassified gene	predicted gene, 44236
6	gene	90.59668	90.60020	negative	MGI_C57BL6J_3783199	Gm15756	NCBI_Gene:102631993,ENSEMBL:ENSMUSG00000089781	MGI:3783199	lncRNA gene	predicted gene 15756
6	gene	90.60210	90.60693	negative	MGI_C57BL6J_5825574	Gm45937	NCBI_Gene:108167323	MGI:5825574	lncRNA gene	predicted gene, 45937
6	gene	90.60473	90.64641	positive	MGI_C57BL6J_1918949	Slc41a3	NCBI_Gene:71699,ENSEMBL:ENSMUSG00000030089	MGI:1918949	protein coding gene	solute carrier family 41, member 3
6	gene	90.65609	90.98869	negative	MGI_C57BL6J_1196356	Iqsec1	NCBI_Gene:232227,ENSEMBL:ENSMUSG00000034312	MGI:1196356	protein coding gene	IQ motif and Sec7 domain 1
6	gene	90.68137	90.68152	negative	MGI_C57BL6J_5454593	Gm24816	ENSEMBL:ENSMUSG00000093052	MGI:5454593	miRNA gene	predicted gene, 24816
6	gene	90.68973	90.69083	positive	MGI_C57BL6J_5690515	Gm44123	ENSEMBL:ENSMUSG00000107999	MGI:5690515	lncRNA gene	predicted gene, 44123
6	gene	90.77774	90.78208	negative	MGI_C57BL6J_2444127	E130314K07Rik	NA	NA	unclassified gene	RIKEN cDNA E130314K07 gene
6	gene	90.79390	90.79448	negative	MGI_C57BL6J_5690497	Gm44105	ENSEMBL:ENSMUSG00000107795	MGI:5690497	lncRNA gene	predicted gene, 44105
6	pseudogene	90.84492	90.84549	negative	MGI_C57BL6J_3648214	Rpl21-ps12	NCBI_Gene:100043646,ENSEMBL:ENSMUSG00000058700	MGI:3648214	pseudogene	ribosomal protein L21, pseudogene 12
6	gene	90.85754	90.85763	positive	MGI_C57BL6J_5454962	Gm25185	ENSEMBL:ENSMUSG00000088379	MGI:5454962	snoRNA gene	predicted gene, 25185
6	pseudogene	90.90556	90.90712	positive	MGI_C57BL6J_3647847	Ppp1r2-ps2	NCBI_Gene:665685,ENSEMBL:ENSMUSG00000099662	MGI:3647847	pseudogene	protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 2
6	gene	91.00997	91.01067	positive	MGI_C57BL6J_5621745	Gm38860	NCBI_Gene:105242717	MGI:5621745	lncRNA gene	predicted gene, 38860
6	gene	91.01307	91.11701	negative	MGI_C57BL6J_1859555	Nup210	NCBI_Gene:54563,ENSEMBL:ENSMUSG00000030091	MGI:1859555	protein coding gene	nucleoporin 210
6	gene	91.11710	91.12697	positive	MGI_C57BL6J_5589523	Gm30364	NCBI_Gene:102632229	MGI:5589523	lncRNA gene	predicted gene, 30364
6	gene	91.11982	91.12094	negative	MGI_C57BL6J_5690670	Gm44278	ENSEMBL:ENSMUSG00000107882	MGI:5690670	lncRNA gene	predicted gene, 44278
6	gene	91.15667	91.17469	positive	MGI_C57BL6J_2385252	Hdac11	NCBI_Gene:232232,ENSEMBL:ENSMUSG00000034245	MGI:2385252	protein coding gene	histone deacetylase 11
6	gene	91.15871	91.15926	negative	MGI_C57BL6J_3705150	Gm14573	ENSEMBL:ENSMUSG00000085624	MGI:3705150	lncRNA gene	predicted gene 14573
6	gene	91.17342	91.17402	negative	MGI_C57BL6J_5690394	Gm44002	ENSEMBL:ENSMUSG00000108158	MGI:5690394	unclassified gene	predicted gene, 44002
6	gene	91.20722	91.21004	negative	MGI_C57BL6J_1926044	4930402H05Rik	ENSEMBL:ENSMUSG00000107397	MGI:1926044	unclassified gene	RIKEN cDNA 4930402H05 gene
6	gene	91.21246	91.27254	positive	MGI_C57BL6J_95488	Fbln2	NCBI_Gene:14115,ENSEMBL:ENSMUSG00000064080	MGI:95488	protein coding gene	fibulin 2
6	pseudogene	91.32057	91.32103	negative	MGI_C57BL6J_5826623	Gm46986	NCBI_Gene:108169195	MGI:5826623	pseudogene	predicted gene, 46986
6	gene	91.36398	91.41137	negative	MGI_C57BL6J_98961	Wnt7a	NCBI_Gene:22421,ENSEMBL:ENSMUSG00000030093	MGI:98961	protein coding gene	wingless-type MMTV integration site family, member 7A
6	gene	91.41151	91.41272	positive	MGI_C57BL6J_5589596	Gm30437	NCBI_Gene:102632338,ENSEMBL:ENSMUSG00000108804	MGI:5589596	lncRNA gene	predicted gene, 30437
6	pseudogene	91.42827	91.42881	negative	MGI_C57BL6J_3852371	Vmn1r-ps35	NCBI_Gene:100312494	MGI:3852371	pseudogene	vomeronasal 1 receptor, pseudogene 35
6	gene	91.42831	91.44091	negative	MGI_C57BL6J_1922150	4930471M09Rik	NCBI_Gene:75787,ENSEMBL:ENSMUSG00000097693	MGI:1922150	lncRNA gene	RIKEN cDNA 4930471M09 gene
6	pseudogene	91.42887	91.43006	positive	MGI_C57BL6J_3782758	Gm4575	NCBI_Gene:100043659,ENSEMBL:ENSMUSG00000098240	MGI:3782758	pseudogene	predicted gene 4575
6	pseudogene	91.43008	91.43048	negative	MGI_C57BL6J_3852372	Vmn1r-ps36	NCBI_Gene:100312495	MGI:3852372	pseudogene	vomeronasal 1 receptor, pseudogene 36
6	gene	91.44099	91.44176	positive	MGI_C57BL6J_1917048	1810044D09Rik	NCBI_Gene:69798,ENSEMBL:ENSMUSG00000100680	MGI:1917048	lncRNA gene	RIKEN cDNA 1810044D09 gene
6	pseudogene	91.44503	91.44687	negative	MGI_C57BL6J_5753205	Gm44629	ENSEMBL:ENSMUSG00000108810	MGI:5753205	pseudogene	predicted gene 44629
6	gene	91.46217	91.47355	negative	MGI_C57BL6J_1919420	Chchd4	NCBI_Gene:72170,ENSEMBL:ENSMUSG00000034203	MGI:1919420	protein coding gene	coiled-coil-helix-coiled-coil-helix domain containing 4
6	gene	91.47370	91.48846	positive	MGI_C57BL6J_1921372	Tmem43	NCBI_Gene:74122,ENSEMBL:ENSMUSG00000030095	MGI:1921372	protein coding gene	transmembrane protein 43
6	gene	91.48931	91.51589	negative	MGI_C57BL6J_103557	Xpc	NCBI_Gene:22591,ENSEMBL:ENSMUSG00000030094	MGI:103557	protein coding gene	xeroderma pigmentosum, complementation group C
6	gene	91.51593	91.52263	positive	MGI_C57BL6J_1914928	Lsm3	NCBI_Gene:67678,ENSEMBL:ENSMUSG00000034192	MGI:1914928	protein coding gene	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
6	gene	91.52241	91.53238	positive	MGI_C57BL6J_5753792	Gm45216	ENSEMBL:ENSMUSG00000108584	MGI:5753792	lncRNA gene	predicted gene 45216
6	pseudogene	91.59476	91.59515	positive	MGI_C57BL6J_5753791	Gm45215	ENSEMBL:ENSMUSG00000108335	MGI:5753791	pseudogene	predicted gene 45215
6	gene	91.59923	91.60551	positive	MGI_C57BL6J_5753794	Gm45218	ENSEMBL:ENSMUSG00000108308	MGI:5753794	lncRNA gene	predicted gene 45218
6	gene	91.66074	91.67968	positive	MGI_C57BL6J_5623272	Gm40387	NCBI_Gene:105244853	MGI:5623272	lncRNA gene	predicted gene, 40387
6	gene	91.66341	91.67962	negative	MGI_C57BL6J_5589787	Gm30628	NCBI_Gene:102632595	MGI:5589787	lncRNA gene	predicted gene, 30628
6	gene	91.67820	91.67922	negative	MGI_C57BL6J_5753793	Gm45217	ENSEMBL:ENSMUSG00000108751	MGI:5753793	unclassified gene	predicted gene 45217
6	gene	91.68405	91.75907	positive	MGI_C57BL6J_98488	Slc6a6	NCBI_Gene:21366,ENSEMBL:ENSMUSG00000030096	MGI:98488	protein coding gene	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
6	gene	91.68993	91.69161	negative	MGI_C57BL6J_1921977	4930517G19Rik	ENSEMBL:ENSMUSG00000108784	MGI:1921977	unclassified gene	RIKEN cDNA 4930517G19 gene
6	gene	91.70941	91.71124	positive	MGI_C57BL6J_5804943	Gm45828	ENSEMBL:ENSMUSG00000108526	MGI:5804943	unclassified gene	predicted gene 45828
6	gene	91.71134	91.71328	negative	MGI_C57BL6J_5753557	Gm44981	ENSEMBL:ENSMUSG00000108574	MGI:5753557	unclassified gene	predicted gene 44981
6	gene	91.76151	91.84395	negative	MGI_C57BL6J_2681173	Grip2	NCBI_Gene:243547,ENSEMBL:ENSMUSG00000030098	MGI:2681173	protein coding gene	glutamate receptor interacting protein 2
6	gene	91.87691	91.87798	negative	MGI_C57BL6J_5753288	Gm44712	ENSEMBL:ENSMUSG00000108310	MGI:5753288	unclassified gene	predicted gene 44712
6	gene	91.87765	91.89985	positive	MGI_C57BL6J_2444652	Ccdc174	NCBI_Gene:232236,ENSEMBL:ENSMUSG00000034083	MGI:2444652	protein coding gene	coiled-coil domain containing 174
6	gene	91.90269	91.95174	positive	MGI_C57BL6J_2685917	4930590J08Rik	NCBI_Gene:381798,ENSEMBL:ENSMUSG00000034063	MGI:2685917	protein coding gene	RIKEN cDNA 4930590J08 gene
6	gene	91.93825	91.93951	negative	MGI_C57BL6J_5753287	Gm44711	ENSEMBL:ENSMUSG00000108625	MGI:5753287	unclassified gene	predicted gene 44711
6	gene	91.97882	92.07600	positive	MGI_C57BL6J_2443369	Fgd5	NCBI_Gene:232237,ENSEMBL:ENSMUSG00000034037	MGI:2443369	protein coding gene	FYVE, RhoGEF and PH domain containing 5
6	gene	92.00755	92.00948	positive	MGI_C57BL6J_5690487	Gm44095	ENSEMBL:ENSMUSG00000107794	MGI:5690487	unclassified gene	predicted gene, 44095
6	gene	92.01239	92.01612	negative	MGI_C57BL6J_1923066	4930466I24Rik	ENSEMBL:ENSMUSG00000087317	MGI:1923066	lncRNA gene	RIKEN cDNA 4930466I24 gene
6	gene	92.09139	92.17429	positive	MGI_C57BL6J_1352466	Nr2c2	NCBI_Gene:22026,ENSEMBL:ENSMUSG00000005893	MGI:1352466	protein coding gene	nuclear receptor subfamily 2, group C, member 2
6	gene	92.14449	92.14629	negative	MGI_C57BL6J_5690641	Gm44249	ENSEMBL:ENSMUSG00000108199	MGI:5690641	unclassified gene	predicted gene, 44249
6	gene	92.15101	92.15741	negative	MGI_C57BL6J_5826604	Gm46967	NCBI_Gene:108169155	MGI:5826604	lncRNA gene	predicted gene, 46967
6	gene	92.16599	92.16702	negative	MGI_C57BL6J_1924500	9430019H13Rik	NA	NA	unclassified gene	RIKEN cDNA 9430019H13 gene
6	gene	92.16951	92.18403	negative	MGI_C57BL6J_1928140	Mrps25	NCBI_Gene:64658,ENSEMBL:ENSMUSG00000014551	MGI:1928140	protein coding gene	mitochondrial ribosomal protein S25
6	gene	92.18671	92.21492	negative	MGI_C57BL6J_1925537	Rbsn	NCBI_Gene:78287,ENSEMBL:ENSMUSG00000014550	MGI:1925537	protein coding gene	rabenosyn, RAB effector
6	gene	92.24206	92.24465	negative	MGI_C57BL6J_98823	Trh	NCBI_Gene:22044,ENSEMBL:ENSMUSG00000005892	MGI:98823	protein coding gene	thyrotropin releasing hormone
6	gene	92.26922	92.31581	positive	MGI_C57BL6J_5589847	Gm30688	NCBI_Gene:102632679	MGI:5589847	lncRNA gene	predicted gene, 30688
6	pseudogene	92.27134	92.27170	negative	MGI_C57BL6J_5753379	Gm44803	NCBI_Gene:108169156,ENSEMBL:ENSMUSG00000108140	MGI:5753379	pseudogene	predicted gene 44803
6	pseudogene	92.28092	92.28139	negative	MGI_C57BL6J_5690416	Gm44024	ENSEMBL:ENSMUSG00000108279	MGI:5690416	pseudogene	predicted gene, 44024
6	gene	92.37089	92.70634	negative	MGI_C57BL6J_1925144	Prickle2	NCBI_Gene:243548,ENSEMBL:ENSMUSG00000030020	MGI:1925144	protein coding gene	prickle planar cell polarity protein 2
6	gene	92.40358	92.42232	positive	MGI_C57BL6J_5621747	Gm38862	NCBI_Gene:105242720	MGI:5621747	lncRNA gene	predicted gene, 38862
6	gene	92.42245	92.42469	positive	MGI_C57BL6J_5621746	Gm38861	NCBI_Gene:105242719	MGI:5621746	lncRNA gene	predicted gene, 38861
6	pseudogene	92.56176	92.56296	positive	MGI_C57BL6J_5009983	Gm17797	NCBI_Gene:100151689,ENSEMBL:ENSMUSG00000098130	MGI:5009983	pseudogene	predicted gene, 17797
6	pseudogene	92.56443	92.56598	negative	MGI_C57BL6J_3647623	Gm5880	NCBI_Gene:545866	MGI:3647623	pseudogene	predicted gene 5880
6	gene	92.77270	92.94405	negative	MGI_C57BL6J_1916320	Adamts9	NCBI_Gene:101401,ENSEMBL:ENSMUSG00000030022	MGI:1916320	protein coding gene	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
6	gene	92.81648	92.84718	positive	MGI_C57BL6J_1921766	A730049H05Rik	NCBI_Gene:74516,ENSEMBL:ENSMUSG00000048636	MGI:1921766	protein coding gene	RIKEN cDNA A730049H05 gene
6	gene	92.86936	92.88441	positive	MGI_C57BL6J_3783179	Gm15737	ENSEMBL:ENSMUSG00000079462	MGI:3783179	protein coding gene	predicted gene 15737
6	gene	92.94033	93.27298	positive	MGI_C57BL6J_1924659	9530026P05Rik	NCBI_Gene:330385,ENSEMBL:ENSMUSG00000097462	MGI:1924659	lncRNA gene	RIKEN cDNA 9530026P05 gene
6	gene	92.96385	92.96466	positive	MGI_C57BL6J_2441979	D630004L18Rik	NA	NA	unclassified gene	RIKEN cDNA D630004L18 gene
6	gene	93.07911	93.08057	positive	MGI_C57BL6J_5690616	Gm44224	ENSEMBL:ENSMUSG00000108286	MGI:5690616	unclassified gene	predicted gene, 44224
6	pseudogene	93.13680	93.13801	negative	MGI_C57BL6J_3646641	Gm5313	NCBI_Gene:384461,ENSEMBL:ENSMUSG00000097996	MGI:3646641	pseudogene	predicted gene 5313
6	gene	93.19413	93.23900	positive	MGI_C57BL6J_5621748	Gm38863	NCBI_Gene:105242721	MGI:5621748	lncRNA gene	predicted gene, 38863
6	gene	93.19494	93.19785	positive	MGI_C57BL6J_5690315	Gm43923	ENSEMBL:ENSMUSG00000108256	MGI:5690315	unclassified gene	predicted gene, 43923
6	gene	93.24172	93.24421	positive	MGI_C57BL6J_5690612	Gm44220	ENSEMBL:ENSMUSG00000107655	MGI:5690612	unclassified gene	predicted gene, 44220
6	pseudogene	93.27803	93.27971	positive	MGI_C57BL6J_5434407	Gm21052	NCBI_Gene:100534392	MGI:5434407	pseudogene	predicted gene, 21052
6	gene	93.29915	93.31473	negative	MGI_C57BL6J_5826605	Gm46968	NCBI_Gene:108169157	MGI:5826605	lncRNA gene	predicted gene, 46968
6	gene	93.33546	93.33559	negative	MGI_C57BL6J_5454871	Gm25094	ENSEMBL:ENSMUSG00000077180	MGI:5454871	snoRNA gene	predicted gene, 25094
6	gene	93.45507	93.45556	negative	MGI_C57BL6J_5690573	Gm44181	ENSEMBL:ENSMUSG00000107848	MGI:5690573	unclassified gene	predicted gene, 44181
6	gene	93.50957	93.50970	positive	MGI_C57BL6J_5452089	Gm22312	ENSEMBL:ENSMUSG00000088630	MGI:5452089	snoRNA gene	predicted gene, 22312
6	pseudogene	93.64935	93.65023	negative	MGI_C57BL6J_3646293	Gm7812	NCBI_Gene:665831,ENSEMBL:ENSMUSG00000107739	MGI:3646293	pseudogene	predicted gene 7812
6	gene	93.67545	94.28392	negative	MGI_C57BL6J_1203522	Magi1	NCBI_Gene:14924,ENSEMBL:ENSMUSG00000045095	MGI:1203522	protein coding gene	membrane associated guanylate kinase, WW and PDZ domain containing 1
6	gene	93.79377	93.79388	positive	MGI_C57BL6J_5452812	Gm23035	ENSEMBL:ENSMUSG00000088627	MGI:5452812	snRNA gene	predicted gene, 23035
6	gene	93.89061	93.89075	positive	MGI_C57BL6J_5452617	Gm22840	ENSEMBL:ENSMUSG00000089069	MGI:5452617	snoRNA gene	predicted gene, 22840
6	gene	93.91777	93.92078	negative	MGI_C57BL6J_3028056	B430316J06Rik	NA	NA	unclassified gene	RIKEN cDNA B430316J06 gene
6	gene	93.98880	93.98974	negative	MGI_C57BL6J_1924419	8030459D09Rik	NA	NA	unclassified gene	RIKEN cDNA 8030459D09 gene
6	gene	94.12951	94.13266	positive	MGI_C57BL6J_5590880	Gm31721	NCBI_Gene:102634038	MGI:5590880	lncRNA gene	predicted gene, 31721
6	gene	94.13292	94.23744	negative	MGI_C57BL6J_1925428	4930511A08Rik	NCBI_Gene:78178	MGI:1925428	lncRNA gene	RIKEN cDNA 4930511A08 gene
6	gene	94.28403	94.29209	positive	MGI_C57BL6J_5590820	Gm31661	NCBI_Gene:102633964	MGI:5590820	lncRNA gene	predicted gene, 31661
6	pseudogene	94.32327	94.32403	negative	MGI_C57BL6J_5690699	Gm44307	ENSEMBL:ENSMUSG00000107545	MGI:5690699	pseudogene	predicted gene, 44307
6	pseudogene	94.34158	94.35424	positive	MGI_C57BL6J_5012093	Gm19908	NCBI_Gene:100503811,ENSEMBL:ENSMUSG00000107435	MGI:5012093	pseudogene	predicted gene, 19908
6	pseudogene	94.41780	94.41824	positive	MGI_C57BL6J_3646507	Gm7825	NCBI_Gene:665856,ENSEMBL:ENSMUSG00000107616	MGI:3646507	pseudogene	predicted gene 7825
6	pseudogene	94.48418	94.48440	negative	MGI_C57BL6J_5690707	Gm44315	ENSEMBL:ENSMUSG00000107781	MGI:5690707	pseudogene	predicted gene, 44315
6	pseudogene	94.49543	94.49597	negative	MGI_C57BL6J_5011264	Gm19079	NCBI_Gene:100418221	MGI:5011264	pseudogene	predicted gene, 19079
6	gene	94.50001	94.60467	positive	MGI_C57BL6J_1914832	Slc25a26	NCBI_Gene:67582,ENSEMBL:ENSMUSG00000045100	MGI:1914832	protein coding gene	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
6	gene	94.60453	94.70025	negative	MGI_C57BL6J_107935	Lrig1	NCBI_Gene:16206,ENSEMBL:ENSMUSG00000030029	MGI:107935	protein coding gene	leucine-rich repeats and immunoglobulin-like domains 1
6	gene	94.60636	94.60641	negative	MGI_C57BL6J_5531254	Mir7041	miRBase:MI0022890,NCBI_Gene:102466992,ENSEMBL:ENSMUSG00000098531	MGI:5531254	miRNA gene	microRNA 7041
6	pseudogene	94.72217	94.72280	positive	MGI_C57BL6J_3779619	Gm6638	NCBI_Gene:625941	MGI:3779619	pseudogene	predicted gene 6638
6	gene	94.79943	94.80044	positive	MGI_C57BL6J_5690389	Gm43997	ENSEMBL:ENSMUSG00000107716	MGI:5690389	unclassified gene	predicted gene, 43997
6	pseudogene	94.82051	94.82172	positive	MGI_C57BL6J_3643837	Gm7833	NCBI_Gene:665865,ENSEMBL:ENSMUSG00000097943	MGI:3643837	pseudogene	predicted gene 7833
6	gene	94.82373	94.82380	positive	MGI_C57BL6J_5453141	Gm23364	ENSEMBL:ENSMUSG00000092767	MGI:5453141	miRNA gene	predicted gene, 23364
6	gene	94.82678	94.82692	negative	MGI_C57BL6J_5454378	Gm24601	ENSEMBL:ENSMUSG00000088595	MGI:5454378	rRNA gene	predicted gene, 24601
6	pseudogene	94.84840	94.84883	negative	MGI_C57BL6J_5690492	Gm44100	ENSEMBL:ENSMUSG00000107940	MGI:5690492	pseudogene	predicted gene, 44100
6	gene	94.94383	94.95154	positive	MGI_C57BL6J_1926023	4930511E03Rik	NCBI_Gene:78773,ENSEMBL:ENSMUSG00000108187	MGI:1926023	lncRNA gene	RIKEN cDNA 4930511E03 gene
6	gene	95.09201	95.09508	negative	MGI_C57BL6J_1920900	2410024F20Rik	NA	NA	unclassified gene	RIKEN cDNA 2410024F20 gene
6	gene	95.10020	95.10031	negative	MGI_C57BL6J_5456278	Gm26501	ENSEMBL:ENSMUSG00000093999	MGI:5456278	snRNA gene	predicted gene, 26501
6	gene	95.11401	95.11795	negative	MGI_C57BL6J_1919467	Kbtbd8os	NCBI_Gene:102634268,ENSEMBL:ENSMUSG00000085413	MGI:1919467	antisense lncRNA gene	kelch repeat and BTB (POZ) domain containing 8, opposite strand
6	gene	95.11724	95.12979	positive	MGI_C57BL6J_2661430	Kbtbd8	NCBI_Gene:243574,ENSEMBL:ENSMUSG00000030031	MGI:2661430	protein coding gene	kelch repeat and BTB (POZ) domain containing 8
6	pseudogene	95.23992	95.24061	negative	MGI_C57BL6J_5010007	Gm17822	NCBI_Gene:100328567,ENSEMBL:ENSMUSG00000107934	MGI:5010007	pseudogene	predicted gene, 17822
6	pseudogene	95.25030	95.25451	positive	MGI_C57BL6J_3647796	Gm5723	NCBI_Gene:435912,ENSEMBL:ENSMUSG00000107900	MGI:3647796	pseudogene	predicted gene 5723
6	gene	95.25573	95.33399	negative	MGI_C57BL6J_3041245	AY512915	NCBI_Gene:414067,ENSEMBL:ENSMUSG00000068180	MGI:3041245	lncRNA gene	cDNA sequence AY512915
6	gene	95.32211	95.32221	positive	MGI_C57BL6J_3642207	Gm10234	ENSEMBL:ENSMUSG00000068181	MGI:3642207	protein coding gene	predicted gene 10234
6	gene	95.47301	95.71886	negative	MGI_C57BL6J_1306824	Suclg2	NCBI_Gene:20917,ENSEMBL:ENSMUSG00000061838	MGI:1306824	protein coding gene	succinate-Coenzyme A ligase, GDP-forming, beta subunit
6	gene	95.84160	95.89211	positive	MGI_C57BL6J_5591168	Gm32009	NCBI_Gene:102634424	MGI:5591168	lncRNA gene	predicted gene, 32009
6	gene	95.90523	95.92297	positive	MGI_C57BL6J_5621749	Gm38864	NCBI_Gene:105242722	MGI:5621749	lncRNA gene	predicted gene, 38864
6	pseudogene	95.92574	95.92693	negative	MGI_C57BL6J_3644048	Gm7838	NCBI_Gene:665886,ENSEMBL:ENSMUSG00000107856	MGI:3644048	pseudogene	predicted gene 7838
6	gene	96.02263	96.11705	negative	MGI_C57BL6J_1920261	2900060L22Rik	NCBI_Gene:102634502	MGI:1920261	unclassified non-coding RNA gene	RIKEN cDNA 2900060L22 gene
6	pseudogene	96.03300	96.03337	negative	MGI_C57BL6J_3779532	Gm5881	NCBI_Gene:545867,ENSEMBL:ENSMUSG00000107747	MGI:3779532	pseudogene	predicted gene 5881
6	gene	96.03543	96.03659	negative	MGI_C57BL6J_1925169	A330102K18Rik	NA	NA	unclassified gene	RIKEN cDNA A330102K18 gene
6	gene	96.11315	96.65721	positive	MGI_C57BL6J_2443695	Tafa1	NCBI_Gene:320265,ENSEMBL:ENSMUSG00000059187	MGI:2443695	protein coding gene	TAFA chemokine like family member 1
6	gene	96.16450	96.16624	negative	MGI_C57BL6J_1925732	1700123L14Rik	NCBI_Gene:78482,ENSEMBL:ENSMUSG00000072878	MGI:1925732	protein coding gene	RIKEN cDNA 1700123L14 gene
6	gene	96.46944	96.46953	negative	MGI_C57BL6J_5452748	Gm22971	ENSEMBL:ENSMUSG00000065239	MGI:5452748	snRNA gene	predicted gene, 22971
6	gene	96.56076	96.56086	negative	MGI_C57BL6J_5455788	Gm26011	ENSEMBL:ENSMUSG00000077598	MGI:5455788	snRNA gene	predicted gene, 26011
6	gene	96.83120	97.06041	negative	MGI_C57BL6J_2444563	Tafa4	NCBI_Gene:320701,ENSEMBL:ENSMUSG00000046500	MGI:2444563	protein coding gene	TAFA chemokine like family member 4
6	gene	97.11002	97.14970	negative	MGI_C57BL6J_2141669	Eogt	NCBI_Gene:101351,ENSEMBL:ENSMUSG00000035245	MGI:2141669	protein coding gene	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
6	gene	97.14819	97.15172	positive	MGI_C57BL6J_5690457	Gm44065	ENSEMBL:ENSMUSG00000107502	MGI:5690457	unclassified gene	predicted gene, 44065
6	gene	97.15195	97.17912	negative	MGI_C57BL6J_2684999	Tmf1	NCBI_Gene:232286,ENSEMBL:ENSMUSG00000030059	MGI:2684999	protein coding gene	TATA element modulatory factor 1
6	gene	97.16282	97.16295	negative	MGI_C57BL6J_5455952	Gm26175	ENSEMBL:ENSMUSG00000065728	MGI:5455952	snoRNA gene	predicted gene, 26175
6	gene	97.18363	97.20565	negative	MGI_C57BL6J_1341217	Uba3	NCBI_Gene:22200,ENSEMBL:ENSMUSG00000030061	MGI:1341217	protein coding gene	ubiquitin-like modifier activating enzyme 3
6	gene	97.21069	97.23332	positive	MGI_C57BL6J_1929501	Arl6ip5	NCBI_Gene:65106,ENSEMBL:ENSMUSG00000035199	MGI:1929501	protein coding gene	ADP-ribosylation factor-like 6 interacting protein 5
6	gene	97.23853	97.25310	negative	MGI_C57BL6J_2444169	Lmod3	NCBI_Gene:320502,ENSEMBL:ENSMUSG00000044086	MGI:2444169	protein coding gene	leiomodin 3 (fetal)
6	gene	97.25305	97.27045	positive	MGI_C57BL6J_5591350	Gm32191	NCBI_Gene:102634657	MGI:5591350	lncRNA gene	predicted gene, 32191
6	gene	97.28687	97.61766	negative	MGI_C57BL6J_2141794	Frmd4b	NCBI_Gene:232288,ENSEMBL:ENSMUSG00000030064	MGI:2141794	protein coding gene	FERM domain containing 4B
6	gene	97.39691	97.40069	positive	MGI_C57BL6J_5591539	Gm32380	NCBI_Gene:102634907	MGI:5591539	lncRNA gene	predicted gene, 32380
6	pseudogene	97.44958	97.45149	positive	MGI_C57BL6J_5011838	Gm19653	NCBI_Gene:100503356,ENSEMBL:ENSMUSG00000108185	MGI:5011838	pseudogene	predicted gene, 19653
6	gene	97.51457	97.53817	positive	MGI_C57BL6J_5826607	Gm46970	NCBI_Gene:108169159	MGI:5826607	lncRNA gene	predicted gene, 46970
6	gene	97.54744	97.54757	negative	MGI_C57BL6J_5455629	Gm25852	ENSEMBL:ENSMUSG00000064724	MGI:5455629	snoRNA gene	predicted gene, 25852
6	gene	97.56610	97.57746	positive	MGI_C57BL6J_5826606	Gm46969	NCBI_Gene:108169158	MGI:5826606	lncRNA gene	predicted gene, 46969
6	gene	97.57208	97.57224	negative	MGI_C57BL6J_5453287	Gm23510	ENSEMBL:ENSMUSG00000065017	MGI:5453287	snRNA gene	predicted gene, 23510
6	gene	97.57796	97.65640	positive	MGI_C57BL6J_5591406	Gm32247	NCBI_Gene:102634735	MGI:5591406	lncRNA gene	predicted gene, 32247
6	gene	97.57943	97.58109	negative	MGI_C57BL6J_5690494	Gm44102	ENSEMBL:ENSMUSG00000108093	MGI:5690494	unclassified gene	predicted gene, 44102
6	gene	97.61968	97.62042	positive	MGI_C57BL6J_1925782	C030006F08Rik	NA	NA	unclassified gene	RIKEN cDNA C030006F08 gene
6	gene	97.69392	97.71040	positive	MGI_C57BL6J_5591640	Gm32481	NCBI_Gene:102635045	MGI:5591640	lncRNA gene	predicted gene, 32481
6	gene	97.73044	97.73055	positive	MGI_C57BL6J_5454342	Gm24565	ENSEMBL:ENSMUSG00000094510	MGI:5454342	snRNA gene	predicted gene, 24565
6	gene	97.79051	97.79065	positive	MGI_C57BL6J_5453480	Gm23703	ENSEMBL:ENSMUSG00000089464	MGI:5453480	snoRNA gene	predicted gene, 23703
6	gene	97.80700	98.02136	positive	MGI_C57BL6J_104554	Mitf	NCBI_Gene:17342,ENSEMBL:ENSMUSG00000035158	MGI:104554	protein coding gene	melanogenesis associated transcription factor
6	pseudogene	97.89023	97.89057	negative	MGI_C57BL6J_3782979	Gm15531	NCBI_Gene:100043692,ENSEMBL:ENSMUSG00000083086	MGI:3782979	pseudogene	predicted gene 15531
6	gene	98.12180	98.25131	positive	MGI_C57BL6J_5591751	Gm32592	NCBI_Gene:102635190,ENSEMBL:ENSMUSG00000107902	MGI:5591751	lncRNA gene	predicted gene, 32592
6	gene	98.23571	98.34275	negative	MGI_C57BL6J_2685611	Gm765	NCBI_Gene:330390,ENSEMBL:ENSMUSG00000090667	MGI:2685611	protein coding gene	predicted gene 765
6	gene	98.25829	98.26637	positive	MGI_C57BL6J_5591694	Gm32535	NCBI_Gene:102635115	MGI:5591694	lncRNA gene	predicted gene, 32535
6	pseudogene	98.27554	98.27611	positive	MGI_C57BL6J_3645233	Gm7892	NCBI_Gene:666019	MGI:3645233	pseudogene	predicted gene 7892
6	gene	98.40274	98.42310	positive	MGI_C57BL6J_5591805	Gm32646	NCBI_Gene:102635260	MGI:5591805	lncRNA gene	predicted gene, 32646
6	gene	98.50772	98.51039	positive	MGI_C57BL6J_5591864	Gm32705	NCBI_Gene:102635340	MGI:5591864	lncRNA gene	predicted gene, 32705
6	gene	98.50773	98.69767	negative	MGI_C57BL6J_5690588	Gm44196	ENSEMBL:ENSMUSG00000107614	MGI:5690588	lncRNA gene	predicted gene, 44196
6	gene	98.51764	98.52195	positive	MGI_C57BL6J_5591942	Gm32783	NCBI_Gene:102635448	MGI:5591942	lncRNA gene	predicted gene, 32783
6	gene	98.53138	98.55218	negative	MGI_C57BL6J_1925309	4930595L18Rik	NCBI_Gene:78059,ENSEMBL:ENSMUSG00000107929	MGI:1925309	lncRNA gene	RIKEN cDNA 4930595L18 gene
6	pseudogene	98.75532	98.75803	positive	MGI_C57BL6J_5591467	Gm32308	NCBI_Gene:102634810,ENSEMBL:ENSMUSG00000107938	MGI:5591467	pseudogene	predicted gene, 32308
6	pseudogene	98.86034	98.86082	negative	MGI_C57BL6J_5591540	Gm32381	ENSEMBL:ENSMUSG00000107514	MGI:5591540	pseudogene	predicted gene, 32381
6	gene	98.92534	99.52282	negative	MGI_C57BL6J_1914004	Foxp1	NCBI_Gene:108655,ENSEMBL:ENSMUSG00000030067	MGI:1914004	protein coding gene	forkhead box P1
6	gene	98.96770	98.97193	negative	MGI_C57BL6J_1921805	9130401L11Rik	NA	NA	unclassified gene	RIKEN cDNA 9130401L11 gene
6	gene	98.99764	98.99861	negative	MGI_C57BL6J_1924976	6030492E11Rik	NA	NA	unclassified gene	RIKEN cDNA 6030492E11 gene
6	gene	99.07591	99.07606	negative	MGI_C57BL6J_6121547	Gm49348	ENSEMBL:ENSMUSG00000105902	MGI:6121547	miRNA gene	predicted gene, 49348
6	gene	99.09767	99.10832	negative	MGI_C57BL6J_5011850	Gm19665	NCBI_Gene:100503384	MGI:5011850	unclassified gene	predicted gene, 19665
6	gene	99.11834	99.12753	negative	MGI_C57BL6J_5621750	Gm38865	NCBI_Gene:105242725	MGI:5621750	lncRNA gene	predicted gene, 38865
6	gene	99.25748	99.66680	negative	MGI_C57BL6J_5313143	Gm20696	ENSEMBL:ENSMUSG00000030068	MGI:5313143	protein coding gene	predicted gene 20696
6	gene	99.31849	99.32341	positive	MGI_C57BL6J_5592041	Gm32882	NCBI_Gene:102635590	MGI:5592041	lncRNA gene	predicted gene, 32882
6	gene	99.38461	99.38850	negative	MGI_C57BL6J_5313152	Gm20705	ENSEMBL:ENSMUSG00000093559	MGI:5313152	lncRNA gene	predicted gene 20705
6	gene	99.48459	99.48470	negative	MGI_C57BL6J_5452105	Gm22328	ENSEMBL:ENSMUSG00000088699	MGI:5452105	miRNA gene	predicted gene, 22328
6	gene	99.52245	99.52417	negative	MGI_C57BL6J_3045275	B930049P21Rik	NA	NA	unclassified gene	RIKEN cDNA B930049P21 gene
6	gene	99.52775	99.53367	negative	MGI_C57BL6J_5826628	Gm46991	NCBI_Gene:108169204	MGI:5826628	lncRNA gene	predicted gene, 46991
6	gene	99.57589	99.57614	positive	MGI_C57BL6J_5454713	Gm24936	ENSEMBL:ENSMUSG00000084547	MGI:5454713	unclassified non-coding RNA gene	predicted gene, 24936
6	gene	99.62514	99.66677	negative	MGI_C57BL6J_1914142	Eif4e3	NCBI_Gene:66892,ENSEMBL:ENSMUSG00000093661	MGI:1914142	protein coding gene	eukaryotic translation initiation factor 4E member 3
6	gene	99.65844	99.66222	negative	MGI_C57BL6J_5690496	Gm44104	ENSEMBL:ENSMUSG00000107583	MGI:5690496	unclassified gene	predicted gene, 44104
6	gene	99.69268	99.69507	positive	MGI_C57BL6J_1202299	Gpr27	NCBI_Gene:14761,ENSEMBL:ENSMUSG00000072875	MGI:1202299	protein coding gene	G protein-coupled receptor 27
6	gene	99.71130	99.72639	negative	MGI_C57BL6J_1354178	Prok2	NCBI_Gene:50501,ENSEMBL:ENSMUSG00000030069	MGI:1354178	protein coding gene	prokineticin 2
6	gene	99.72577	99.73261	positive	MGI_C57BL6J_5477242	Gm26748	NCBI_Gene:102635772,ENSEMBL:ENSMUSG00000097548	MGI:5477242	lncRNA gene	predicted gene, 26748
6	pseudogene	99.76252	99.77127	positive	MGI_C57BL6J_3646639	Gm5314	NCBI_Gene:384466,ENSEMBL:ENSMUSG00000108082	MGI:3646639	pseudogene	predicted gene 5314
6	pseudogene	99.83966	99.84035	negative	MGI_C57BL6J_3643996	Gm6681	NCBI_Gene:626503,ENSEMBL:ENSMUSG00000107713	MGI:3643996	pseudogene	predicted gene 6681
6	gene	99.86507	99.86677	positive	MGI_C57BL6J_5592302	Gm33143	NCBI_Gene:102635932	MGI:5592302	lncRNA gene	predicted gene, 33143
6	pseudogene	99.87761	99.87843	negative	MGI_C57BL6J_2664997	Tpt1-ps3	NCBI_Gene:100043703,ENSEMBL:ENSMUSG00000084319	MGI:2664997	pseudogene	tumor protein, translationally-controlled, pseudogene 3
6	gene	99.88440	99.89684	negative	MGI_C57BL6J_5663204	Gm43067	ENSEMBL:ENSMUSG00000107204	MGI:5663204	lncRNA gene	predicted gene 43067
6	gene	99.89323	99.89355	negative	MGI_C57BL6J_5454025	Gm24248	ENSEMBL:ENSMUSG00000087946	MGI:5454025	unclassified non-coding RNA gene	predicted gene, 24248
6	gene	99.92825	99.95093	negative	MGI_C57BL6J_5690834	Gm44442	ENSEMBL:ENSMUSG00000107528	MGI:5690834	lncRNA gene	predicted gene, 44442
6	gene	99.96652	99.99121	negative	MGI_C57BL6J_5592360	Gm33201	NCBI_Gene:102636006,ENSEMBL:ENSMUSG00000108151	MGI:5592360	lncRNA gene	predicted gene, 33201
6	gene	100.06190	100.08724	positive	MGI_C57BL6J_5592402	Gm33243	NCBI_Gene:102636070	MGI:5592402	lncRNA gene	predicted gene, 33243
6	gene	100.09503	100.09961	positive	MGI_C57BL6J_5621751	Gm38866	NCBI_Gene:105242726	MGI:5621751	lncRNA gene	predicted gene, 38866
6	gene	100.09962	100.10141	positive	MGI_C57BL6J_5592456	Gm33297	NCBI_Gene:102636145	MGI:5592456	lncRNA gene	predicted gene, 33297
6	gene	100.14333	100.14708	negative	MGI_C57BL6J_1917515	2010109P13Rik	NCBI_Gene:108169160,ENSEMBL:ENSMUSG00000107558	MGI:1917515	lncRNA gene	RIKEN cDNA 2010109P13 gene
6	gene	100.15513	100.18173	negative	MGI_C57BL6J_5592607	Gm33448	NCBI_Gene:102636361	MGI:5592607	lncRNA gene	predicted gene, 33448
6	gene	100.19600	100.20123	positive	MGI_C57BL6J_5592713	Gm33554	NCBI_Gene:102636508	MGI:5592713	lncRNA gene	predicted gene, 33554
6	gene	100.20533	100.20914	positive	MGI_C57BL6J_5621752	Gm38867	NCBI_Gene:105242727	MGI:5621752	lncRNA gene	predicted gene, 38867
6	gene	100.22857	100.28749	negative	MGI_C57BL6J_1929059	Rybp	NCBI_Gene:56353,ENSEMBL:ENSMUSG00000072872	MGI:1929059	protein coding gene	RING1 and YY1 binding protein
6	pseudogene	100.24723	100.25034	positive	MGI_C57BL6J_5010607	Gm18422	NCBI_Gene:100417147,ENSEMBL:ENSMUSG00000108269	MGI:5010607	pseudogene	predicted gene, 18422
6	gene	100.25671	100.25923	negative	MGI_C57BL6J_5690437	Gm44045	ENSEMBL:ENSMUSG00000107461	MGI:5690437	unclassified gene	predicted gene, 44045
6	gene	100.27261	100.27370	negative	MGI_C57BL6J_5690436	Gm44044	ENSEMBL:ENSMUSG00000107690	MGI:5690436	unclassified gene	predicted gene, 44044
6	gene	100.46924	100.47124	positive	MGI_C57BL6J_5621753	Gm38868	NCBI_Gene:105242728	MGI:5621753	lncRNA gene	predicted gene, 38868
6	gene	100.49468	100.49481	negative	MGI_C57BL6J_5453011	Gm23234	ENSEMBL:ENSMUSG00000087929	MGI:5453011	snoRNA gene	predicted gene, 23234
6	gene	100.49851	100.49991	positive	MGI_C57BL6J_5690499	Gm44107	ENSEMBL:ENSMUSG00000107663	MGI:5690499	lncRNA gene	predicted gene, 44107
6	gene	100.50419	100.51003	negative	MGI_C57BL6J_5592900	Gm33741	NCBI_Gene:102636759	MGI:5592900	lncRNA gene	predicted gene, 33741
6	gene	100.52740	100.53343	positive	MGI_C57BL6J_1920645	1700049E22Rik	NCBI_Gene:73395,ENSEMBL:ENSMUSG00000101553	MGI:1920645	lncRNA gene	RIKEN cDNA 1700049E22 gene
6	gene	100.56826	100.67118	negative	MGI_C57BL6J_1919421	Shq1	NCBI_Gene:72171,ENSEMBL:ENSMUSG00000035378	MGI:1919421	protein coding gene	SHQ1 homolog (S. cerevisiae)
6	gene	100.56826	100.56973	negative	MGI_C57BL6J_1917782	5730433K22Rik	NA	NA	unclassified gene	RIKEN cDNA 5730433K22 gene
6	pseudogene	100.60456	100.60641	positive	MGI_C57BL6J_3644755	Gm6565	NCBI_Gene:100503412,ENSEMBL:ENSMUSG00000079224	MGI:3644755	pseudogene	predicted gene 6565
6	pseudogene	100.62652	100.62694	negative	MGI_C57BL6J_5690500	Gm44108	ENSEMBL:ENSMUSG00000108019	MGI:5690500	pseudogene	predicted gene, 44108
6	gene	100.66094	100.66246	negative	MGI_C57BL6J_5690508	Gm44116	ENSEMBL:ENSMUSG00000108122	MGI:5690508	unclassified gene	predicted gene, 44116
6	gene	100.70429	100.81091	positive	MGI_C57BL6J_2682940	Gxylt2	NCBI_Gene:232313,ENSEMBL:ENSMUSG00000030074	MGI:2682940	protein coding gene	glucoside xylosyltransferase 2
6	pseudogene	100.72617	100.72701	positive	MGI_C57BL6J_3783024	Gm15576	NCBI_Gene:100416942,ENSEMBL:ENSMUSG00000084157	MGI:3783024	pseudogene	predicted gene 15576
6	gene	100.79183	100.79391	positive	MGI_C57BL6J_5011877	Gm19692	ENSEMBL:ENSMUSG00000107989	MGI:5011877	unclassified gene	predicted gene, 19692

Additive covariates

Significance thresholds

operm <- scan1perm(pr.qc, covars["age.of.onset"], model="normal", addcovar=addcovar, n_perm=10, perm_Xsp=TRUE, chr_lengths=chr_lengths(gm$gmap))

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))
names(summary_table) <- c("autosomes","X")
summary_table$significance.level <- rownames(summary_table)

rownames(summary_table) <- NULL

summary_table[c(3,1:2)] %>%
  kable(escape = F,align = c("ccc")) %>%
  kable_styling("striped", full_width = T) %>%
  column_spec(1, bold=TRUE)

significance.level	autosomes	X
0.01	2.885451	3.379466
0.05	2.881192	3.124444
0.1	2.875854	2.790959

Genome-wide scan

plot_lod<-function(out,map){
  for (i in 1:dim(out)[2]){
#par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - ICI vs. EOI (ith additive covariates) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

  }
}


print("with no kinship")

[1] “with no kinship”

outfa <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", addcovar=addcovar)

plot_lod(outfa,gm$gmap)

print("with normal kinship")

[1] “with normal kinship”

outka <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", addcovar=addcovar, kinship=kinship)

plot_lod(outka,gm$gmap)

print("with loco kinship")

[1] “with loco kinship”

outa <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", addcovar=addcovar, kinship=K)

plot_lod(outa,gm$gmap)

out = outa

print(paste0("number of samples in analysis = ", as.data.frame(attributes(out)$sample_size)[1,]))

[1] “number of samples in analysis = 101”

LOD peaks

Centimorgan (cM)

peaks<-find_peaks(out, gm$gmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)
if(nrow(peaks) > 0){
peaks$marker <- find_marker(gm$gmap, chr=peaks$chr,pos=peaks$pos)
names(peaks)[2] <- c("phenotype")
peaks <- peaks[-1]

rownames(peaks) <- NULL
print(kable(peaks, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

#plot only peak chromosomes

plot_lod_chr<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " - ICI vs. EOI (with additive covariates) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

  }
}


} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 2.88119166563917 [autosomes]/3.12444410138338 [x-chromosome]”

if(nrow(peaks) < 50 & nrow(peaks) > 0){

for(i in unique(peaks$chr)){
#for (i in 1:nrow(peaks)){
  #plot_lod_chr(out,gm$gmap, peaks$chr[i])
  plot_lod_chr(out,gm$gmap, i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are too many peaks (0 peaks) that have a LOD that reaches suggestive (p<0.05) level of 2.88119166563917 [autosomes]/3.12444410138338 [x-chromosome]”

Megabase (MB)

peaks_mba<-find_peaks(out, gm$pmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)
if(nrow(peaks) > 0){
peaks_mba$marker <- find_marker(gm$pmap, chr=peaks_mba$chr,pos=peaks_mba$pos)
names(peaks_mba)[2] <- c("phenotype")
peaks_mba <- peaks_mba[-1]

rownames(peaks_mba) <- NULL
print(kable(peaks_mba, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

plot_lod_chr_mb<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " - ICI vs. EOI (with additive covariates) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()
  }
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 2.88119166563917 [autosomes]/3.12444410138338 [x-chromosome]”

if(nrow(peaks_mba) < 50 & nrow(peaks_mba) > 0){

for(i in unique(peaks_mba$chr)){
#for (i in 1:nrow(peaks_mba)){
  #plot_lod_chr_mb(out,gm$pmap, peaks_mba$chr[i])
  plot_lod_chr_mb(out,gm$pmap,i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks_mba)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are too many peaks (0 peaks) that have a LOD that reaches suggestive (p<0.05) level of 2.88119166563917 [autosomes]/3.12444410138338 [x-chromosome]”

QTL effects

For each peak LOD location we give a list of gene

if(nrow(peaks) < 50 & nrow(peaks) > 0){
for (i in 1:nrow(peaks)){
#for (i in 1:1){
  #Plot 1
  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, covars[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], covars[peaks$phenotype[i]])
  blup_sub <- scan1blup(pr_sub[,chr], covars[peaks$phenotype[i]])

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.eoi_",peaks$phenotype[i],"-additive.covariates_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM] )")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM] )")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM] )")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.eoi_",peaks$phenotype[i],"-additive.covariates_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))

  #table
  

}
} else {
  print(paste0("There are too many peaks (",nrow(peaks_mba)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are too many peaks (0 peaks) that have a LOD that reaches suggestive (p<0.05) level of 2.88119166563917 [autosomes]/3.12444410138338 [x-chromosome]”

Interactive term

Significance thresholds

operm <- scan1perm(pr.qc, covars["age.of.onset"], model="normal", addcovar=addcovar, intcovar=addcovar, n_perm=10, perm_Xsp=TRUE, chr_lengths=chr_lengths(gm$gmap))

summary_table<-data.frame(unclass(summary(operm, alpha=c(0.01,  0.05, 0.1))))
names(summary_table) <- c("autosomes","X")
summary_table$significance.level <- rownames(summary_table)

rownames(summary_table) <- NULL

summary_table[c(3,1:2)] %>%
  kable(escape = F,align = c("ccc")) %>%
  kable_styling("striped", full_width = T) %>%
  column_spec(1, bold=TRUE)

significance.level	autosomes	X
0.01	2.123784	3.089406
0.05	2.077429	2.942496
0.1	2.019340	2.750385

Genome-wide scan

plot_lod<-function(out,map){
  for (i in 1:dim(out)[2]){
#par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - ICI vs. EOI (with interactive covariate) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')

  }
}


print("with no kinship")

[1] “with no kinship”

outfi <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", addcovar=addcovar, intcovar=addcovar)

plot_lod(outfi,gm$gmap)

outf.new <- outfi-outfa

plot_lod(outf.new,gm$gmap)

print("with normal kinship")

[1] “with normal kinship”

outki <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", addcovar=addcovar, intcovar=addcovar, kinship=kinship)

plot_lod(outki,gm$gmap)

outk.new <- outki-outka

plot_lod(outk.new,gm$gmap)

print("with loco kinship")

[1] “with loco kinship”

outi <- scan1(pr.qc, covars["age.of.onset"], Xcovar=Xcovar, model="normal", addcovar=addcovar, intcovar=addcovar, kinship=K)

plot_lod(outi,gm$gmap)

outi.new <- outi-outa

plot_lod(outi.new,gm$gmap)

out = outi.new


print(paste0("number of samples in analysis = ", as.data.frame(attributes(out)$sample_size)[1,]))

[1] “number of samples in analysis = 101”

LOD peaks

Centimorgan (cM)

peaks<-find_peaks(out, gm$gmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)
if(nrow(peaks) > 0){
peaks$marker <- find_marker(gm$gmap, chr=peaks$chr,pos=peaks$pos)
names(peaks)[2] <- c("phenotype")
peaks <- peaks[-1]

rownames(peaks) <- NULL
print(kable(peaks, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

#plot only peak chromosomes

plot_lod_chr<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " - ICI vs. EOI (with interactive covariate) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()

  }
}


} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 2.07742869819588 [autosomes]/2.94249586915186 [x-chromosome]”

if(nrow(peaks) < 50 & nrow(peaks) > 0){

for(i in unique(peaks$chr)){
#for (i in 1:nrow(peaks)){
  #plot_lod_chr(out,gm$gmap, peaks$chr[i])
  plot_lod_chr(out,gm$gmap, i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are too many peaks (0 peaks) that have a LOD that reaches suggestive (p<0.05) level of 2.07742869819588 [autosomes]/2.94249586915186 [x-chromosome]”

Megabase (MB)

peaks_mba<-find_peaks(out, gm$pmap, threshold=summary(operm,alpha=0.05)$A, thresholdX = summary(operm,alpha=0.05)$X, peakdrop=3, drop=1.5)
if(nrow(peaks) > 0){
peaks_mba$marker <- find_marker(gm$pmap, chr=peaks_mba$chr,pos=peaks_mba$pos)
names(peaks_mba)[2] <- c("phenotype")
peaks_mba <- peaks_mba[-1]

rownames(peaks_mba) <- NULL
print(kable(peaks_mba, escape = F, align = c("cccccccc"), "html") 
  %>% kable_styling("striped", full_width = T)%>%
  column_spec(1, bold=TRUE)
  )

plot_lod_chr_mb<-function(out,map,chrom){
  for (i in 1:dim(out)[2]){
    #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/",colnames(out)[i],  "_lod.png"))
    
    #par(mar=c(5.1, 6.1, 1.1, 1.1))
    ymx <- maxlod(out) # overall maximum LOD score
    plot(out, map, chr = chrom, lodcolumn=i, col="slateblue", ylim=c(0, ymx+0.5))
    #legend("topright", lwd=2, colnames(out)[i], bg="gray90")
    title(main = paste0(colnames(out)[i], " - chr", chrom, " - ICI vs. EOI (with interactive covariate) [positions in cM]"))
    add_threshold(map,  summary(operm,alpha=0.1), col = 'purple')
    add_threshold(map,  summary(operm, alpha=0.05), col = 'red')
    add_threshold(map,  summary(operm, alpha=0.01), col = 'blue')
    #for (j in 1: dim(summary_table)[1]){
    #  abline(h=summary_table[j, i],col="red")
    #  text(x=400, y =summary_table[j, i]+0.12, labels = paste("p=", row.names(summary_table)[j]))
    #}
    #dev.off()
  }
}

} else {
  print(paste0("There are no peaks that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are no peaks that have a LOD that reaches suggestive (p<0.05) level of 2.07742869819588 [autosomes]/2.94249586915186 [x-chromosome]”

if(nrow(peaks_mba) < 50 & nrow(peaks_mba) > 0){

for(i in unique(peaks_mba$chr)){
#for (i in 1:nrow(peaks_mba)){
  #plot_lod_chr_mb(out,gm$pmap, peaks_mba$chr[i])
  plot_lod_chr_mb(out,gm$pmap,i)
}

} else {
  print(paste0("There are too many peaks (",nrow(peaks_mba)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are too many peaks (0 peaks) that have a LOD that reaches suggestive (p<0.05) level of 2.07742869819588 [autosomes]/2.94249586915186 [x-chromosome]”

QTL effects

For each peak LOD location we give a list of gene

if(nrow(peaks) < 50 & nrow(peaks) > 0){
for (i in 1:nrow(peaks)){
#for (i in 1:1){
  #Plot 1
  g <- maxmarg(pr.qc, gm$gmap, chr=peaks$chr[i], pos=peaks$pos[i], return_char=TRUE)
  #png(filename=paste0("/Users/chenm/Documents/qtl/Jai/","qtl_effect_", i, ".png"))
  #par(mar=c(4.1, 4.1, 1.5, 0.6))
  plot_pxg(g, covars[,peaks$phenotype[i]], ylab=peaks$phenotype[i], sort=FALSE)
  title(main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," )"), line=0.2)
  ##dev.off()

  chr = peaks$chr[i]

# Plot 2
  pr_sub <- pull_genoprobint(pr.qc, gm$gmap, chr, c(peaks$ci_lo[i], peaks$ci_hi[i]))
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar)
  #coeff <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], Xcovar=Xcovar)
  #coeff <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  #coeff_sub <- scan1coef(pr_sub[,chr], gm$covar[peaks$lodcolumn[i]], model="binary")
  blup <- scan1blup(pr.qc[,chr], covars[peaks$phenotype[i]])
  blup_sub <- scan1blup(pr_sub[,chr], covars[peaks$phenotype[i]])

  write.csv(as.data.frame(blup_sub), paste0("data/ici.vs.eoi_",peaks$phenotype[i],"-interactive.covariate_blup_sub_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  #plot_coef(coeff, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i]," [scan1coeff; positions in cM] )")
  #     )

  #plot_coef(coeff_sub, 
  #     gm$gmap, columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$lodcolumn[i],"; 1.5 LOD drop interval [scan1coeff; positions in cM] ) ")
  #     )


  plot_coef(blup, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i]," [scan1blup; positions in cM] )")
       )

  plot_coef(blup_sub, 
       gm$gmap, columns=1:2,
       bgcolor="gray95", legend="bottomleft", 
       main = paste0("chr: ", chr=peaks$chr[i],"; pos: ", peaks$pos[i], "cM /",peaks_mba$pos[i],"MB\n(",peaks$phenotype[i],"; 1.5 LOD drop interval [scan1blup; positions in cM] )")
       )


 # Plot 3
  #c2effB <- scan1coef(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], model="binary", contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  #c2effBb <- scan1blup(pr.qc[,chr], gm$covar[peaks$lodcolumn[i]], contrasts=cbind(a=c(-1, 0), d=c(0, -1)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]], addcovar = addcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  ##c2effB <- scan1coef(pr[,chr], cross$pheno[,peaks$lodcolumn[i]],Xcovar=Xcovar, contrasts=cbind(mu=c(1,1,1), a=c(-1, 0, 1), d=c(0, 1, 0)))
  #plot(c2effB, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  #plot(c2effBb, gm$gmap[chr], columns=1:2,
  #     bgcolor="gray95", legend="bottomleft", 
  #     main = paste("chr", chr=peaks$chr[i], "pos", peaks$pos[i], "(",peaks$lodcolumn[i],")")
  #     )
  ##last_coef <- unclass(c2effB)[nrow(c2effB),2:3] # last two coefficients
  ##for(t in seq(along=last_coef))
  ##  axis(side=4, at=last_coef[t], names(last_coef)[t], tick=FALSE)


  #Table 1
  chr = peaks_mba$chr[i]
  start=as.numeric(peaks_mba$ci_lo[i])
  end=as.numeric(peaks_mba$ci_hi[i])

  genesgss = query_genes(chr, start, end)

  write.csv(genesgss, file=paste0("data/ici.vs.eoi_",peaks$phenotype[i],"-interactive.covariate_genes_chr-",chr,"_peak.marker-",peaks$marker[i],"_lod.drop-1.5_snpsqc_5.batches.csv"), quote=F)

  rownames(genesgss) <- NULL
  genesgss$strand_old = genesgss$strand
  genesgss$strand[genesgss$strand=="+"] <- "positive"
  genesgss$strand[genesgss$strand=="-"] <- "negative"

  #genesgss <- 
  #table <- 
  #genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")] %>%
  #kable(escape = F,align = c("ccccccccccc")) %>%
  #kable_styling("striped", full_width = T) #%>% 
  #cat #%>%
  #column_spec(1, bold=TRUE)
#
  #print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], escape = F,align = c("ccccccccccc")))

  print(kable(genesgss[,c("chr","type","start","stop","strand","ID","Name","Dbxref","gene_id","mgi_type","description")], "html") %>% kable_styling("striped", full_width = T))

  #table
  

}
} else {
  print(paste0("There are too many peaks (",nrow(peaks_mba)," peaks) that have a LOD that reaches suggestive (p<0.05) level of ",summary(operm,alpha=0.05)$A, " [autosomes]/",summary(operm,alpha=0.05)$X, " [x-chromosome]"))
}

[1] “There are too many peaks (0 peaks) that have a LOD that reaches suggestive (p<0.05) level of 2.07742869819588 [autosomes]/2.94249586915186 [x-chromosome]”

Session information

R version 3.6.2 (2019-12-12)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Catalina 10.15.7

Matrix products: default
BLAS:   /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib

locale:
[1] en_AU.UTF-8/en_AU.UTF-8/en_AU.UTF-8/C/en_AU.UTF-8/en_AU.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] abind_1.4-5       qtl2_0.22         reshape2_1.4.4    ggplot2_3.3.5    
 [5] tibble_3.1.2      psych_2.0.7       readxl_1.3.1      cluster_2.1.0    
 [9] dplyr_1.0.8       optparse_1.6.6    rhdf5_2.28.1      mclust_5.4.6     
[13] tidyr_1.0.2       data.table_1.14.0 knitr_1.33        kableExtra_1.1.0 
[17] workflowr_1.6.2  

loaded via a namespace (and not attached):
 [1] httr_1.4.1        bit64_4.0.5       viridisLite_0.4.0 assertthat_0.2.1 
 [5] highr_0.9         blob_1.2.1        cellranger_1.1.0  yaml_2.2.1       
 [9] pillar_1.6.1      RSQLite_2.2.7     backports_1.2.1   lattice_0.20-38  
[13] glue_1.4.2        digest_0.6.27     promises_1.1.0    rvest_0.3.5      
[17] colorspace_2.0-2  htmltools_0.5.1.1 httpuv_1.5.2      plyr_1.8.6       
[21] pkgconfig_2.0.3   purrr_0.3.4       scales_1.1.1      webshot_0.5.2    
[25] whisker_0.4       getopt_1.20.3     later_1.0.0       git2r_0.26.1     
[29] generics_0.0.2    ellipsis_0.3.2    cachem_1.0.5      withr_2.4.2      
[33] cli_3.0.0         mnormt_1.5-7      magrittr_2.0.1    crayon_1.4.1     
[37] memoise_2.0.0     evaluate_0.14     fs_1.4.1          fansi_0.5.0      
[41] nlme_3.1-142      xml2_1.3.1        tools_3.6.2       hms_0.5.3        
[45] lifecycle_1.0.1   stringr_1.4.0     Rhdf5lib_1.6.3    munsell_0.5.0    
[49] compiler_3.6.2    rlang_1.0.2       grid_3.6.2        rstudioapi_0.13  
[53] rmarkdown_2.1     gtable_0.3.0      DBI_1.1.1         R6_2.5.0         
[57] fastmap_1.1.0     bit_4.0.4         utf8_1.2.1        rprojroot_1.3-2  
[61] readr_1.3.1       stringi_1.7.2     parallel_3.6.2    Rcpp_1.0.7       
[65] vctrs_0.3.8       tidyselect_1.1.2  xfun_0.24