Summary and Schedule
This is a new lesson built with The Carpentries Workbench.
| Setup Instructions | Download files required for the lesson | |
| Duration: 00h 00m | 1. 00-introduction | |
| Duration: 00h 12m | 2. 01-intro-to-computers | |
| Duration: 00h 42m | 3. 02-singularity-commands | |
| Duration: 01h 12m | 4. 03-singularity-pull-hello-world | |
| Duration: 01h 42m | 5. 04-repos-and-registries | |
| Duration: 02h 12m | 6. 05-singularity-build | |
| Duration: 02h 42m | 7. 06-bioinformatics-qc | |
| Duration: 02h 52m | 8. 07-bioinformatics bwa | |
| Duration: 03h 02m | 9. 08-circos | |
| Duration: 03h 17m | 10. 09-singularity-build | |
| Duration: 03h 52m | 11. 10-singularity-build-rstudio | |
| Duration: 04h 27m | Finish |
The actual schedule may vary slightly depending on the topics and exercises chosen by the instructor.
FIXME: Setup instructions live in this document. Please specify the tools and the data sets the Learner needs to have installed.
Data Sets
Download the data zip file and unzip it to your Desktop
Software Setup
Details
Setup for different systems can be presented in dropdown menus via a
spoiler tag. They will join to this discussion block, so
you can give a general overview of the software used in this lesson here
and fill out the individual operating systems (and potentially add more,
e.g. online setup) in the solutions blocks.
Use PuTTY
Use Terminal.app
Use Terminal