Package org.monarchinitiative.lirical.core.analysis
package org.monarchinitiative.lirical.core.analysis
A high-level representation of LIRICAL analysis.
The analysis subject is provided as AnalysisData. The analysis
is parameterized by AnalysisOptions.
LiricalAnalysisRunner executes the analysis. The output
are wrapped into AnalysisResults which reports results
of matching the subject to computational disease models,
one TestResult per disease.
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ClassDescriptionRepresentation of subject data required by LIRICAL analysis.A container for analysis-specific settings, i.e.A builder for
AnalysisOptions.A container for the likelihood ratio test results.An exception thrown byLiricalAnalysisRunnerif the analysis cannot be run.The analysis runner runs LIRICAL analysis on provided analysis subject (AnalysisData).An exception thrown when user-provided input is invalid.Class for pretty progress reporting using logger.This class organizes information about the result of a test.