Uses of Class
org.monarchinitiative.lirical.core.model.AlleleCount

Packages that use AlleleCount

Package	Description
org.monarchinitiative.lirical.core.model	Package with data models.

Uses of AlleleCount in org.monarchinitiative.lirical.core.model

Methods in org.monarchinitiative.lirical.core.model that return AlleleCount

Modifier and Type	Method	Description
AlleleCount	SampleAlleleCount.getAlleleCount()
static AlleleCount	AlleleCount.of(byte ref, byte alt)
static AlleleCount	AlleleCount.of(int ref, int alt)
static AlleleCount	AlleleCount.oneOne()
static AlleleCount	AlleleCount.zeroOne()
static AlleleCount	AlleleCount.zeroTwo()
static AlleleCount	AlleleCount.zeroZero()

Methods in org.monarchinitiative.lirical.core.model that return types with arguments of type AlleleCount

Modifier and Type	Method	Description
Optional<AlleleCount>	GenotypedVariant.alleleCount(String sampleId)	Get allele count for given sample.

Methods in org.monarchinitiative.lirical.core.model with parameters of type AlleleCount

Modifier and Type	Method	Description
static SampleAlleleCount	SampleAlleleCount.of(String sampleId, AlleleCount alleleCount)