Uses of Package
org.monarchinitiative.lirical.core.output

Packages that use org.monarchinitiative.lirical.core.output

Package	Description
org.monarchinitiative.lirical.cli.cmd	Commands to run LIRICAL in different configurations.
org.monarchinitiative.lirical.core	Core functionality of the LIRICAL algorithm.
org.monarchinitiative.lirical.core.output	Base data model for writing out the results of LIRICAL analysis.
org.monarchinitiative.lirical.io.output	Classes for writing out LIRICAL analysis results into HTML, TSV, and JSON files.

Classes in org.monarchinitiative.lirical.core.output used by org.monarchinitiative.lirical.cli.cmd

Class	Description
OutputFormat	LIRICAL supports writing results in these formats.
OutputOptions

Classes in org.monarchinitiative.lirical.core.output used by org.monarchinitiative.lirical.core

Class	Description
AnalysisResultWriterFactory	Factory class for getting AnalysisResultsWriters.

Classes in org.monarchinitiative.lirical.core.output used by org.monarchinitiative.lirical.core.output

Class	Description
AnalysisResultsMetadata
AnalysisResultsMetadata.Builder
AnalysisResultsWriter	The implementors can store results of LIRICAL analysis in some OutputFormat.
LrThreshold	This class encapsulates the likelihood ratio threshold, which is an optional user argument (-t).
MinDiagnosisCount	This class encapsulates the minimum number of diagnoses to show, which is an optional user argument (-m).
OutputFormat	LIRICAL supports writing results in these formats.
OutputOptions

Classes in org.monarchinitiative.lirical.core.output used by org.monarchinitiative.lirical.io.output

Class	Description
AnalysisResultsMetadata
AnalysisResultsWriter	The implementors can store results of LIRICAL analysis in some OutputFormat.
OutputFormat	LIRICAL supports writing results in these formats.
OutputOptions