Package org.monarchinitiative.lirical.io.output

Class TemplateBasedAnalysisResultsWriter

java.lang.Object

org.monarchinitiative.lirical.io.output.TemplateBasedAnalysisResultsWriter

All Implemented Interfaces:

AnalysisResultsWriter

public class TemplateBasedAnalysisResultsWriter
extends Object
implements AnalysisResultsWriter

Constructor Summary

Constructors

Constructor	Description
TemplateBasedAnalysisResultsWriter(OutputFormat format, org.monarchinitiative.phenol.ontology.data.MinimalOntology hpo, org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseases diseases)

Method Summary

Modifier and Type	Method	Description
void	process(AnalysisData analysisData, AnalysisResults analysisResults, AnalysisResultsMetadata metadata, OutputOptions options)	Write the provided AnalysisData, AnalysisResults and AnalysisResultsMetadata into some OutputFormat as guided by OutputOptions.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

TemplateBasedAnalysisResultsWriter

public TemplateBasedAnalysisResultsWriter(OutputFormat format,
 org.monarchinitiative.phenol.ontology.data.MinimalOntology hpo,
 org.monarchinitiative.phenol.annotations.formats.hpo.HpoDiseases diseases)

Method Details

process

public void process(AnalysisData analysisData,
 AnalysisResults analysisResults,
 AnalysisResultsMetadata metadata,
 OutputOptions options)

Description copied from interface: AnalysisResultsWriter

Write the provided AnalysisData, AnalysisResults and AnalysisResultsMetadata into some OutputFormat as guided by OutputOptions.

Specified by:

process in interface AnalysisResultsWriter