Uses of Interface
org.monarchinitiative.lirical.io.output.VisualizableVariant

Packages that use VisualizableVariant

Package	Description
org.monarchinitiative.lirical.io.output	Classes for writing out LIRICAL analysis results into HTML, TSV, and JSON files.

Uses of VisualizableVariant in org.monarchinitiative.lirical.io.output

Fields in org.monarchinitiative.lirical.io.output with type parameters of type VisualizableVariant

Modifier and Type	Field	Description
protected final List<VisualizableVariant>	BaseDifferential.variants
protected final List<VisualizableVariant>	BaseDifferential.variants

Methods in org.monarchinitiative.lirical.io.output that return VisualizableVariant

Modifier and Type	Method	Description
static VisualizableVariant	VisualizableVariant.of(String sampleId, LiricalVariant lv, boolean isPassingPathogenicityThreshold)

Methods in org.monarchinitiative.lirical.io.output that return types with arguments of type VisualizableVariant

Modifier and Type	Method	Description
List<VisualizableVariant>	DifferentialDiagnosis.getVisualizableVariants()
protected Function<LiricalVariant,VisualizableVariant>	LiricalTemplate.toVisualizableVariant()

Constructor parameters in org.monarchinitiative.lirical.io.output with type arguments of type VisualizableVariant

Modifier	Constructor	Description
	TsvDifferential(String sampleId, org.monarchinitiative.phenol.ontology.data.TermId diseaseId, String diseaseName, TestResult result, int rank, List<VisualizableVariant> variants)