Package org.monarchinitiative.exomiser.core.proto

Class AlleleProto.PathogenicityScore

java.lang.Object

com.google.protobuf.AbstractMessageLite

com.google.protobuf.AbstractMessage

com.google.protobuf.GeneratedMessageV3

org.monarchinitiative.exomiser.core.proto.AlleleProto.PathogenicityScore

All Implemented Interfaces:

com.google.protobuf.Message, com.google.protobuf.MessageLite, com.google.protobuf.MessageLiteOrBuilder, com.google.protobuf.MessageOrBuilder, Serializable, AlleleProto.PathogenicityScoreOrBuilder

Enclosing class:

AlleleProto

public static final class AlleleProto.PathogenicityScore
extends com.google.protobuf.GeneratedMessageV3
implements AlleleProto.PathogenicityScoreOrBuilder

Protobuf type PathogenicityScore

See Also:

• Serialized Form

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static final class	AlleleProto.PathogenicityScore.Builder	Protobuf type PathogenicityScore

Nested classes/interfaces inherited from class com.google.protobuf.GeneratedMessageV3

com.google.protobuf.GeneratedMessageV3.BuilderParent, com.google.protobuf.GeneratedMessageV3.ExtendableBuilder<MessageType extends com.google.protobuf.GeneratedMessageV3.ExtendableMessage,BuilderType extends com.google.protobuf.GeneratedMessageV3.ExtendableBuilder<MessageType,BuilderType>>, com.google.protobuf.GeneratedMessageV3.ExtendableMessage<MessageType extends com.google.protobuf.GeneratedMessageV3.ExtendableMessage>, com.google.protobuf.GeneratedMessageV3.ExtendableMessageOrBuilder<MessageType extends com.google.protobuf.GeneratedMessageV3.ExtendableMessage>, com.google.protobuf.GeneratedMessageV3.FieldAccessorTable, com.google.protobuf.GeneratedMessageV3.UnusedPrivateParameter

Nested classes/interfaces inherited from class com.google.protobuf.AbstractMessageLite

com.google.protobuf.AbstractMessageLite.InternalOneOfEnum

Field Summary

Fields

Modifier and Type	Field	Description
static final int	PATHOGENICITYSOURCE_FIELD_NUMBER
static final int	SCORE_FIELD_NUMBER

Fields inherited from class com.google.protobuf.GeneratedMessageV3

alwaysUseFieldBuilders, unknownFields

Fields inherited from class com.google.protobuf.AbstractMessage

memoizedSize

Fields inherited from class com.google.protobuf.AbstractMessageLite

memoizedHashCode

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object obj)
static AlleleProto.PathogenicityScore	getDefaultInstance()
AlleleProto.PathogenicityScore	getDefaultInstanceForType()
static final com.google.protobuf.Descriptors.Descriptor	getDescriptor()
com.google.protobuf.Parser<AlleleProto.PathogenicityScore>	getParserForType()
AlleleProto.PathogenicitySource	getPathogenicitySource()	.PathogenicitySource pathogenicitySource = 1;
int	getPathogenicitySourceValue()	.PathogenicitySource pathogenicitySource = 1;
float	getScore()	float score = 2;
int	getSerializedSize()
final com.google.protobuf.UnknownFieldSet	getUnknownFields()
int	hashCode()
protected com.google.protobuf.GeneratedMessageV3.FieldAccessorTable	internalGetFieldAccessorTable()
final boolean	isInitialized()
static AlleleProto.PathogenicityScore.Builder	newBuilder()
static AlleleProto.PathogenicityScore.Builder	newBuilder(AlleleProto.PathogenicityScore prototype)
AlleleProto.PathogenicityScore.Builder	newBuilderForType()
protected AlleleProto.PathogenicityScore.Builder	newBuilderForType(com.google.protobuf.GeneratedMessageV3.BuilderParent parent)
protected Object	newInstance(com.google.protobuf.GeneratedMessageV3.UnusedPrivateParameter unused)
static AlleleProto.PathogenicityScore	parseDelimitedFrom(InputStream input)
static AlleleProto.PathogenicityScore	parseDelimitedFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static AlleleProto.PathogenicityScore	parseFrom(byte[] data)
static AlleleProto.PathogenicityScore	parseFrom(byte[] data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static AlleleProto.PathogenicityScore	parseFrom(com.google.protobuf.ByteString data)
static AlleleProto.PathogenicityScore	parseFrom(com.google.protobuf.ByteString data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static AlleleProto.PathogenicityScore	parseFrom(com.google.protobuf.CodedInputStream input)
static AlleleProto.PathogenicityScore	parseFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static AlleleProto.PathogenicityScore	parseFrom(InputStream input)
static AlleleProto.PathogenicityScore	parseFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static AlleleProto.PathogenicityScore	parseFrom(ByteBuffer data)
static AlleleProto.PathogenicityScore	parseFrom(ByteBuffer data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static com.google.protobuf.Parser<AlleleProto.PathogenicityScore>	parser()
AlleleProto.PathogenicityScore.Builder	toBuilder()
void	writeTo(com.google.protobuf.CodedOutputStream output)

Methods inherited from class com.google.protobuf.GeneratedMessageV3

canUseUnsafe, computeStringSize, computeStringSizeNoTag, emptyBooleanList, emptyDoubleList, emptyFloatList, emptyIntList, emptyLongList, getAllFields, getDescriptorForType, getField, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, hasField, hasOneof, internalGetMapField, makeExtensionsImmutable, mergeFromAndMakeImmutableInternal, mutableCopy, mutableCopy, mutableCopy, mutableCopy, mutableCopy, newBooleanList, newBuilderForType, newDoubleList, newFloatList, newIntList, newLongList, parseDelimitedWithIOException, parseDelimitedWithIOException, parseUnknownField, parseUnknownFieldProto3, parseWithIOException, parseWithIOException, parseWithIOException, parseWithIOException, serializeBooleanMapTo, serializeIntegerMapTo, serializeLongMapTo, serializeStringMapTo, writeReplace, writeString, writeStringNoTag

Methods inherited from class com.google.protobuf.AbstractMessage

findInitializationErrors, getInitializationErrorString, hashBoolean, hashEnum, hashEnumList, hashFields, hashLong, toString

Methods inherited from class com.google.protobuf.AbstractMessageLite

addAll, addAll, checkByteStringIsUtf8, toByteArray, toByteString, writeDelimitedTo, writeTo

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface com.google.protobuf.MessageLite

toByteArray, toByteString, writeDelimitedTo, writeTo

Methods inherited from interface com.google.protobuf.MessageOrBuilder

findInitializationErrors, getAllFields, getDescriptorForType, getField, getInitializationErrorString, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, hasField, hasOneof

Field Details

PATHOGENICITYSOURCE_FIELD_NUMBER

public static final int PATHOGENICITYSOURCE_FIELD_NUMBER

See Also:

• Constant Field Values

SCORE_FIELD_NUMBER

public static final int SCORE_FIELD_NUMBER

See Also:

• Constant Field Values

Method Details

newInstance

protected Object newInstance(com.google.protobuf.GeneratedMessageV3.UnusedPrivateParameter unused)

Overrides:

newInstance in class com.google.protobuf.GeneratedMessageV3

getUnknownFields

public final com.google.protobuf.UnknownFieldSet getUnknownFields()

Specified by:

getUnknownFields in interface com.google.protobuf.MessageOrBuilder

Overrides:

getUnknownFields in class com.google.protobuf.GeneratedMessageV3

getDescriptor

public static final com.google.protobuf.Descriptors.Descriptor getDescriptor()

internalGetFieldAccessorTable

protected com.google.protobuf.GeneratedMessageV3.FieldAccessorTable internalGetFieldAccessorTable()

Specified by:

internalGetFieldAccessorTable in class com.google.protobuf.GeneratedMessageV3

getPathogenicitySourceValue

public int getPathogenicitySourceValue()

.PathogenicitySource pathogenicitySource = 1;

Specified by:

getPathogenicitySourceValue in interface AlleleProto.PathogenicityScoreOrBuilder

Returns:

The enum numeric value on the wire for pathogenicitySource.

getPathogenicitySource

public AlleleProto.PathogenicitySource getPathogenicitySource()

.PathogenicitySource pathogenicitySource = 1;

Specified by:

getPathogenicitySource in interface AlleleProto.PathogenicityScoreOrBuilder

Returns:

The pathogenicitySource.

getScore

public float getScore()

float score = 2;

Specified by:

getScore in interface AlleleProto.PathogenicityScoreOrBuilder

Returns:

The score.

isInitialized

public final boolean isInitialized()

Specified by:

isInitialized in interface com.google.protobuf.MessageLiteOrBuilder

Overrides:

isInitialized in class com.google.protobuf.GeneratedMessageV3

writeTo

public void writeTo(com.google.protobuf.CodedOutputStream output)
             throws IOException

Specified by:

writeTo in interface com.google.protobuf.MessageLite

Overrides:

writeTo in class com.google.protobuf.GeneratedMessageV3

Throws:

IOException

getSerializedSize

public int getSerializedSize()

Specified by:

getSerializedSize in interface com.google.protobuf.MessageLite

Overrides:

getSerializedSize in class com.google.protobuf.GeneratedMessageV3

equals

public boolean equals(Object obj)

Specified by:

equals in interface com.google.protobuf.Message

Overrides:

equals in class com.google.protobuf.AbstractMessage

hashCode

public int hashCode()

Specified by:

hashCode in interface com.google.protobuf.Message

Overrides:

hashCode in class com.google.protobuf.AbstractMessage

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(ByteBuffer data)
                                                throws com.google.protobuf.InvalidProtocolBufferException

Throws:

com.google.protobuf.InvalidProtocolBufferException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(ByteBuffer data,
 com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                throws com.google.protobuf.InvalidProtocolBufferException

Throws:

com.google.protobuf.InvalidProtocolBufferException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(com.google.protobuf.ByteString data)
                                                throws com.google.protobuf.InvalidProtocolBufferException

Throws:

com.google.protobuf.InvalidProtocolBufferException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(com.google.protobuf.ByteString data,
 com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                throws com.google.protobuf.InvalidProtocolBufferException

Throws:

com.google.protobuf.InvalidProtocolBufferException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(byte[] data)
                                                throws com.google.protobuf.InvalidProtocolBufferException

Throws:

com.google.protobuf.InvalidProtocolBufferException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(byte[] data,
 com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                throws com.google.protobuf.InvalidProtocolBufferException

Throws:

com.google.protobuf.InvalidProtocolBufferException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(InputStream input)
                                                throws IOException

Throws:

IOException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(InputStream input,
 com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                throws IOException

Throws:

IOException

parseDelimitedFrom

public static AlleleProto.PathogenicityScore parseDelimitedFrom(InputStream input)
                                                         throws IOException

Throws:

IOException

parseDelimitedFrom

public static AlleleProto.PathogenicityScore parseDelimitedFrom(InputStream input,
 com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                         throws IOException

Throws:

IOException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(com.google.protobuf.CodedInputStream input)
                                                throws IOException

Throws:

IOException

parseFrom

public static AlleleProto.PathogenicityScore parseFrom(com.google.protobuf.CodedInputStream input,
 com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                throws IOException

Throws:

IOException

newBuilderForType

public AlleleProto.PathogenicityScore.Builder newBuilderForType()

Specified by:

newBuilderForType in interface com.google.protobuf.Message

Specified by:

newBuilderForType in interface com.google.protobuf.MessageLite

newBuilder

public static AlleleProto.PathogenicityScore.Builder newBuilder()

newBuilder

public static AlleleProto.PathogenicityScore.Builder newBuilder(AlleleProto.PathogenicityScore prototype)

toBuilder

public AlleleProto.PathogenicityScore.Builder toBuilder()

Specified by:

toBuilder in interface com.google.protobuf.Message

Specified by:

toBuilder in interface com.google.protobuf.MessageLite

newBuilderForType

protected AlleleProto.PathogenicityScore.Builder newBuilderForType(com.google.protobuf.GeneratedMessageV3.BuilderParent parent)

Specified by:

newBuilderForType in class com.google.protobuf.GeneratedMessageV3

getDefaultInstance

public static AlleleProto.PathogenicityScore getDefaultInstance()

parser

public static com.google.protobuf.Parser<AlleleProto.PathogenicityScore> parser()

getParserForType

public com.google.protobuf.Parser<AlleleProto.PathogenicityScore> getParserForType()

Specified by:

getParserForType in interface com.google.protobuf.Message

Specified by:

getParserForType in interface com.google.protobuf.MessageLite

Overrides:

getParserForType in class com.google.protobuf.GeneratedMessageV3

getDefaultInstanceForType

public AlleleProto.PathogenicityScore getDefaultInstanceForType()

Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageLiteOrBuilder

Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageOrBuilder