Uses of Package
org.monarchinitiative.lirical.core.likelihoodratio

Packages that use org.monarchinitiative.lirical.core.likelihoodratio

Package	Description
org.monarchinitiative.lirical.core.analysis	A high-level representation of LIRICAL analysis.
org.monarchinitiative.lirical.core.likelihoodratio	Package with logic for calculation of likelihood ratios for phenotypic or genotypic test results.

Classes in org.monarchinitiative.lirical.core.likelihoodratio used by org.monarchinitiative.lirical.core.analysis

Class	Description
GenotypeLrWithExplanation	Results of genotype likelihood ratio evaluation for a single gene.
LrWithExplanation	There are five possible ways that a query term can match a disease term.

Classes in org.monarchinitiative.lirical.core.likelihoodratio used by org.monarchinitiative.lirical.core.likelihoodratio

Class	Description
GenotypeLikelihoodRatio.Options
GenotypeLrMatchType	The enum for representing the type of the genotype likelihood ratio analysis performed for a gene.
GenotypeLrWithExplanation	Results of genotype likelihood ratio evaluation for a single gene.
InducedDiseaseGraph	For some calculations of the phenotype likelihood ratio, we need to traverse the graph induced by the HPO terms to which a disease is annotated.
LrMatchType
LrWithExplanation	There are five possible ways that a query term can match a disease term.