Package org.monarchinitiative.lirical.core

package org.monarchinitiative.lirical.core

Core functionality of the LIRICAL algorithm.

Related Packages

Package	Description
org.monarchinitiative.lirical.core.analysis	A high-level representation of LIRICAL analysis.
org.monarchinitiative.lirical.core.exception	Top-level exceptions.
org.monarchinitiative.lirical.core.io	APIs for reading and annotation of genomic variants.
org.monarchinitiative.lirical.core.likelihoodratio	Package with logic for calculation of likelihood ratios for phenotypic or genotypic test results.
org.monarchinitiative.lirical.core.model	Package with data models.
org.monarchinitiative.lirical.core.output	Base data model for writing out the results of LIRICAL analysis.
org.monarchinitiative.lirical.core.sanitize	Sanitize the user-provided SanitationInputs.
org.monarchinitiative.lirical.core.service	Package with services used across LIRICAL.
org.monarchinitiative.lirical.core.util	Package with utility methods such as binary search with custom comparator for extracting the sorting key.

Classes

Class	Description
Lirical
LiricalOptions	Global options to parameterize LIRICAL execution.