Package org.monarchinitiative.exomiser.core.proto

Class AlleleProto.AlleleKey.Builder

java.lang.Object

com.google.protobuf.AbstractMessageLite.Builder

com.google.protobuf.AbstractMessage.Builder<BuilderT>

com.google.protobuf.GeneratedMessage.Builder<AlleleProto.AlleleKey.Builder>

org.monarchinitiative.exomiser.core.proto.AlleleProto.AlleleKey.Builder

All Implemented Interfaces:

com.google.protobuf.Message.Builder, com.google.protobuf.MessageLite.Builder, com.google.protobuf.MessageLiteOrBuilder, com.google.protobuf.MessageOrBuilder, Cloneable, AlleleProto.AlleleKeyOrBuilder

Enclosing class:

AlleleProto.AlleleKey

public static final class AlleleProto.AlleleKey.Builder
extends com.google.protobuf.GeneratedMessage.Builder<AlleleProto.AlleleKey.Builder>
implements AlleleProto.AlleleKeyOrBuilder

Protobuf type AlleleKey

Method Summary

Modifier and Type	Method	Description
AlleleProto.AlleleKey	build()
AlleleProto.AlleleKey	buildPartial()
AlleleProto.AlleleKey.Builder	clear()
AlleleProto.AlleleKey.Builder	clearAlt()	string alt = 4;
AlleleProto.AlleleKey.Builder	clearChr()	int32 chr = 1;
AlleleProto.AlleleKey.Builder	clearPosition()	int32 position = 2;
AlleleProto.AlleleKey.Builder	clearRef()	string ref = 3;
String	getAlt()	string alt = 4;
com.google.protobuf.ByteString	getAltBytes()	string alt = 4;
int	getChr()	int32 chr = 1;
AlleleProto.AlleleKey	getDefaultInstanceForType()
static final com.google.protobuf.Descriptors.Descriptor	getDescriptor()
com.google.protobuf.Descriptors.Descriptor	getDescriptorForType()
int	getPosition()	int32 position = 2;
String	getRef()	string ref = 3;
com.google.protobuf.ByteString	getRefBytes()	string ref = 3;
protected com.google.protobuf.GeneratedMessage.FieldAccessorTable	internalGetFieldAccessorTable()
final boolean	isInitialized()
AlleleProto.AlleleKey.Builder	mergeFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
AlleleProto.AlleleKey.Builder	mergeFrom(com.google.protobuf.Message other)
AlleleProto.AlleleKey.Builder	mergeFrom(AlleleProto.AlleleKey other)
AlleleProto.AlleleKey.Builder	setAlt(String value)	string alt = 4;
AlleleProto.AlleleKey.Builder	setAltBytes(com.google.protobuf.ByteString value)	string alt = 4;
AlleleProto.AlleleKey.Builder	setChr(int value)	int32 chr = 1;
AlleleProto.AlleleKey.Builder	setPosition(int value)	int32 position = 2;
AlleleProto.AlleleKey.Builder	setRef(String value)	string ref = 3;
AlleleProto.AlleleKey.Builder	setRefBytes(com.google.protobuf.ByteString value)	string ref = 3;

Methods inherited from class com.google.protobuf.GeneratedMessage.Builder

addRepeatedField, clearField, clearOneof, clone, getAllFields, getField, getFieldBuilder, getOneofFieldDescriptor, getParentForChildren, getRepeatedField, getRepeatedFieldBuilder, getRepeatedFieldCount, getUnknownFields, getUnknownFieldSetBuilder, hasField, hasOneof, internalGetMapField, internalGetMapFieldReflection, internalGetMutableMapField, internalGetMutableMapFieldReflection, isClean, markClean, mergeUnknownFields, mergeUnknownLengthDelimitedField, mergeUnknownVarintField, newBuilderForField, onBuilt, onChanged, parseUnknownField, setField, setRepeatedField, setUnknownFields, setUnknownFieldSetBuilder, setUnknownFieldsProto3

Methods inherited from class com.google.protobuf.AbstractMessage.Builder

findInitializationErrors, getInitializationErrorString, internalMergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, newUninitializedMessageException, toString

Methods inherited from class com.google.protobuf.AbstractMessageLite.Builder

addAll, addAll, mergeDelimitedFrom, mergeDelimitedFrom, mergeFrom, newUninitializedMessageException

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface com.google.protobuf.Message.Builder

mergeDelimitedFrom, mergeDelimitedFrom

Methods inherited from interface com.google.protobuf.MessageLite.Builder

mergeFrom

Methods inherited from interface com.google.protobuf.MessageOrBuilder

findInitializationErrors, getAllFields, getField, getInitializationErrorString, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof

Method Details

getDescriptor

public static final com.google.protobuf.Descriptors.Descriptor getDescriptor()

internalGetFieldAccessorTable

protected com.google.protobuf.GeneratedMessage.FieldAccessorTable internalGetFieldAccessorTable()

Specified by:

internalGetFieldAccessorTable in class com.google.protobuf.GeneratedMessage.Builder<AlleleProto.AlleleKey.Builder>

clear

public AlleleProto.AlleleKey.Builder clear()

Specified by:

clear in interface com.google.protobuf.Message.Builder

Specified by:

clear in interface com.google.protobuf.MessageLite.Builder

Overrides:

clear in class com.google.protobuf.GeneratedMessage.Builder<AlleleProto.AlleleKey.Builder>

getDescriptorForType

public com.google.protobuf.Descriptors.Descriptor getDescriptorForType()

Specified by:

getDescriptorForType in interface com.google.protobuf.Message.Builder

Specified by:

getDescriptorForType in interface com.google.protobuf.MessageOrBuilder

Overrides:

getDescriptorForType in class com.google.protobuf.GeneratedMessage.Builder<AlleleProto.AlleleKey.Builder>

getDefaultInstanceForType

public AlleleProto.AlleleKey getDefaultInstanceForType()

Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageLiteOrBuilder

Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageOrBuilder

build

public AlleleProto.AlleleKey build()

Specified by:

build in interface com.google.protobuf.Message.Builder

Specified by:

build in interface com.google.protobuf.MessageLite.Builder

buildPartial

public AlleleProto.AlleleKey buildPartial()

Specified by:

buildPartial in interface com.google.protobuf.Message.Builder

Specified by:

buildPartial in interface com.google.protobuf.MessageLite.Builder

mergeFrom

public AlleleProto.AlleleKey.Builder mergeFrom(com.google.protobuf.Message other)

Specified by:

mergeFrom in interface com.google.protobuf.Message.Builder

Overrides:

mergeFrom in class com.google.protobuf.AbstractMessage.Builder<AlleleProto.AlleleKey.Builder>

mergeFrom

public AlleleProto.AlleleKey.Builder mergeFrom(AlleleProto.AlleleKey other)

isInitialized

public final boolean isInitialized()

Specified by:

isInitialized in interface com.google.protobuf.MessageLiteOrBuilder

Overrides:

isInitialized in class com.google.protobuf.GeneratedMessage.Builder<AlleleProto.AlleleKey.Builder>

mergeFrom

public AlleleProto.AlleleKey.Builder mergeFrom(com.google.protobuf.CodedInputStream input,
 com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                        throws IOException

Specified by:

mergeFrom in interface com.google.protobuf.Message.Builder

Specified by:

mergeFrom in interface com.google.protobuf.MessageLite.Builder

Overrides:

mergeFrom in class com.google.protobuf.AbstractMessage.Builder<AlleleProto.AlleleKey.Builder>

Throws:

IOException

getChr

public int getChr()

int32 chr = 1;

Specified by:

getChr in interface AlleleProto.AlleleKeyOrBuilder

Returns:

The chr.

setChr

public AlleleProto.AlleleKey.Builder setChr(int value)

int32 chr = 1;

Parameters:

value - The chr to set.

Returns:

This builder for chaining.

clearChr

public AlleleProto.AlleleKey.Builder clearChr()

int32 chr = 1;

Returns:

This builder for chaining.

getPosition

public int getPosition()

int32 position = 2;

Specified by:

getPosition in interface AlleleProto.AlleleKeyOrBuilder

Returns:

The position.

setPosition

public AlleleProto.AlleleKey.Builder setPosition(int value)

int32 position = 2;

Parameters:

value - The position to set.

Returns:

This builder for chaining.

clearPosition

public AlleleProto.AlleleKey.Builder clearPosition()

int32 position = 2;

Returns:

This builder for chaining.

getRef

public String getRef()

string ref = 3;

Specified by:

getRef in interface AlleleProto.AlleleKeyOrBuilder

Returns:

The ref.

getRefBytes

public com.google.protobuf.ByteString getRefBytes()

string ref = 3;

Specified by:

getRefBytes in interface AlleleProto.AlleleKeyOrBuilder

Returns:

The bytes for ref.

setRef

public AlleleProto.AlleleKey.Builder setRef(String value)

string ref = 3;

Parameters:

value - The ref to set.

Returns:

This builder for chaining.

clearRef

public AlleleProto.AlleleKey.Builder clearRef()

string ref = 3;

Returns:

This builder for chaining.

setRefBytes

public AlleleProto.AlleleKey.Builder setRefBytes(com.google.protobuf.ByteString value)

string ref = 3;

Parameters:

value - The bytes for ref to set.

Returns:

This builder for chaining.

getAlt

public String getAlt()

string alt = 4;

Specified by:

getAlt in interface AlleleProto.AlleleKeyOrBuilder

Returns:

The alt.

getAltBytes

public com.google.protobuf.ByteString getAltBytes()

string alt = 4;

Specified by:

getAltBytes in interface AlleleProto.AlleleKeyOrBuilder

Returns:

The bytes for alt.

setAlt

public AlleleProto.AlleleKey.Builder setAlt(String value)

string alt = 4;

Parameters:

value - The alt to set.

Returns:

This builder for chaining.

clearAlt

public AlleleProto.AlleleKey.Builder clearAlt()

string alt = 4;

Returns:

This builder for chaining.

setAltBytes

public AlleleProto.AlleleKey.Builder setAltBytes(com.google.protobuf.ByteString value)

string alt = 4;

Parameters:

value - The bytes for alt to set.

Returns:

This builder for chaining.