Package org.monarchinitiative.exomiser.core.proto

Class AlleleProto.AlleleKey

java.lang.Object
com.google.protobuf.AbstractMessageLite
com.google.protobuf.AbstractMessage
com.google.protobuf.GeneratedMessageV3
org.monarchinitiative.exomiser.core.proto.AlleleProto.AlleleKey
All Implemented Interfaces:
com.google.protobuf.Message, com.google.protobuf.MessageLite, com.google.protobuf.MessageLiteOrBuilder, com.google.protobuf.MessageOrBuilder, Serializable, AlleleProto.AlleleKeyOrBuilder
Enclosing class:
AlleleProto
public static final class AlleleProto.AlleleKey extends com.google.protobuf.GeneratedMessageV3 implements AlleleProto.AlleleKeyOrBuilder
Protobuf type AlleleKey
See Also:

  • Nested Class Summary

    Nested Classes
    Modifier and Type
    Class
    Description
    static final class 
    AlleleProto.AlleleKey.Builder
    Protobuf type AlleleKey

    Nested classes/interfaces inherited from class com.google.protobuf.GeneratedMessageV3

    com.google.protobuf.GeneratedMessageV3.BuilderParent, com.google.protobuf.GeneratedMessageV3.ExtendableBuilder<MessageType extends com.google.protobuf.GeneratedMessageV3.ExtendableMessage,BuilderType extends com.google.protobuf.GeneratedMessageV3.ExtendableBuilder<MessageType,BuilderType>>, com.google.protobuf.GeneratedMessageV3.ExtendableMessage<MessageType extends com.google.protobuf.GeneratedMessageV3.ExtendableMessage>, com.google.protobuf.GeneratedMessageV3.ExtendableMessageOrBuilder<MessageType extends com.google.protobuf.GeneratedMessageV3.ExtendableMessage>, com.google.protobuf.GeneratedMessageV3.FieldAccessorTable, com.google.protobuf.GeneratedMessageV3.UnusedPrivateParameter

    Nested classes/interfaces inherited from class com.google.protobuf.AbstractMessageLite

    com.google.protobuf.AbstractMessageLite.InternalOneOfEnum

  • Field Summary

    Fields
    Modifier and Type
    Field
    Description
    static final int
    ALT_FIELD_NUMBER
     
    static final int
    CHR_FIELD_NUMBER
     
    static final int
    POSITION_FIELD_NUMBER
     
    static final int
    REF_FIELD_NUMBER
     

    Fields inherited from class com.google.protobuf.GeneratedMessageV3

    alwaysUseFieldBuilders, unknownFields

    Fields inherited from class com.google.protobuf.AbstractMessage

    memoizedSize

    Fields inherited from class com.google.protobuf.AbstractMessageLite

    memoizedHashCode

  • Method Summary

    Modifier and Type
    Method
    Description
    boolean
    equals(Object obj)
     
    String
    getAlt()
    string alt = 4;
    com.google.protobuf.ByteString
    getAltBytes()
    string alt = 4;
    int
    getChr()
    int32 chr = 1;
    static AlleleProto.AlleleKey
    getDefaultInstance()
     
    AlleleProto.AlleleKey
    getDefaultInstanceForType()
     
    static final com.google.protobuf.Descriptors.Descriptor
    getDescriptor()
     
    com.google.protobuf.Parser<AlleleProto.AlleleKey>
    getParserForType()
     
    int
    getPosition()
    int32 position = 2;
    String
    getRef()
    string ref = 3;
    com.google.protobuf.ByteString
    getRefBytes()
    string ref = 3;
    int
    getSerializedSize()
     
    final com.google.protobuf.UnknownFieldSet
    getUnknownFields()
     
    int
    hashCode()
     
    protected com.google.protobuf.GeneratedMessageV3.FieldAccessorTable
    internalGetFieldAccessorTable()
     
    final boolean
    isInitialized()
     
    static AlleleProto.AlleleKey.Builder
    newBuilder()
     
    static AlleleProto.AlleleKey.Builder
    newBuilder(AlleleProto.AlleleKey prototype)
     
    AlleleProto.AlleleKey.Builder
    newBuilderForType()
     
    protected AlleleProto.AlleleKey.Builder
    newBuilderForType(com.google.protobuf.GeneratedMessageV3.BuilderParent parent)
     
    protected Object
    newInstance(com.google.protobuf.GeneratedMessageV3.UnusedPrivateParameter unused)
     
    static AlleleProto.AlleleKey
    parseDelimitedFrom(InputStream input)
     
    static AlleleProto.AlleleKey
    parseDelimitedFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
     
    static AlleleProto.AlleleKey
    parseFrom(byte[] data)
     
    static AlleleProto.AlleleKey
    parseFrom(byte[] data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
     
    static AlleleProto.AlleleKey
    parseFrom(com.google.protobuf.ByteString data)
     
    static AlleleProto.AlleleKey
    parseFrom(com.google.protobuf.ByteString data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
     
    static AlleleProto.AlleleKey
    parseFrom(com.google.protobuf.CodedInputStream input)
     
    static AlleleProto.AlleleKey
    parseFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
     
    static AlleleProto.AlleleKey
    parseFrom(InputStream input)
     
    static AlleleProto.AlleleKey
    parseFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
     
    static AlleleProto.AlleleKey
    parseFrom(ByteBuffer data)
     
    static AlleleProto.AlleleKey
    parseFrom(ByteBuffer data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
     
    static com.google.protobuf.Parser<AlleleProto.AlleleKey>
    parser()
     
    AlleleProto.AlleleKey.Builder
    toBuilder()
     
    void
    writeTo(com.google.protobuf.CodedOutputStream output)
     

    Methods inherited from class com.google.protobuf.GeneratedMessageV3

    canUseUnsafe, computeStringSize, computeStringSizeNoTag, emptyBooleanList, emptyDoubleList, emptyFloatList, emptyIntList, emptyLongList, getAllFields, getDescriptorForType, getField, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, hasField, hasOneof, internalGetMapField, makeExtensionsImmutable, mergeFromAndMakeImmutableInternal, mutableCopy, mutableCopy, mutableCopy, mutableCopy, mutableCopy, newBooleanList, newBuilderForType, newDoubleList, newFloatList, newIntList, newLongList, parseDelimitedWithIOException, parseDelimitedWithIOException, parseUnknownField, parseUnknownFieldProto3, parseWithIOException, parseWithIOException, parseWithIOException, parseWithIOException, serializeBooleanMapTo, serializeIntegerMapTo, serializeLongMapTo, serializeStringMapTo, writeReplace, writeString, writeStringNoTag

    Methods inherited from class com.google.protobuf.AbstractMessage

    findInitializationErrors, getInitializationErrorString, hashBoolean, hashEnum, hashEnumList, hashFields, hashLong, toString

    Methods inherited from class com.google.protobuf.AbstractMessageLite

    addAll, addAll, checkByteStringIsUtf8, toByteArray, toByteString, writeDelimitedTo, writeTo

    Methods inherited from class java.lang.Object

    clone, finalize, getClass, notify, notifyAll, wait, wait, wait

    Methods inherited from interface com.google.protobuf.MessageLite

    toByteArray, toByteString, writeDelimitedTo, writeTo

    Methods inherited from interface com.google.protobuf.MessageOrBuilder

    findInitializationErrors, getAllFields, getDescriptorForType, getField, getInitializationErrorString, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, hasField, hasOneof

  • Field Details

  • Method Details

    • newInstance

      protected Object newInstance(com.google.protobuf.GeneratedMessageV3.UnusedPrivateParameter unused)
      Overrides:
      newInstance in class com.google.protobuf.GeneratedMessageV3

    • getUnknownFields

      public final com.google.protobuf.UnknownFieldSet getUnknownFields()
      Specified by:
      getUnknownFields in interface com.google.protobuf.MessageOrBuilder
      Overrides:
      getUnknownFields in class com.google.protobuf.GeneratedMessageV3

    • getDescriptor

      public static final com.google.protobuf.Descriptors.Descriptor getDescriptor()

    • internalGetFieldAccessorTable

      protected com.google.protobuf.GeneratedMessageV3.FieldAccessorTable internalGetFieldAccessorTable()
      Specified by:
      internalGetFieldAccessorTable in class com.google.protobuf.GeneratedMessageV3

    • getChr

      public int getChr()
      int32 chr = 1;
      Specified by:
      getChr in interface AlleleProto.AlleleKeyOrBuilder
      Returns:
      The chr.

    • getPosition

      public int getPosition()
      int32 position = 2;
      Specified by:
      getPosition in interface AlleleProto.AlleleKeyOrBuilder
      Returns:
      The position.

    • getRef

      public String getRef()
      string ref = 3;
      Specified by:
      getRef in interface AlleleProto.AlleleKeyOrBuilder
      Returns:
      The ref.

    • getRefBytes

      public com.google.protobuf.ByteString getRefBytes()
      string ref = 3;
      Specified by:
      getRefBytes in interface AlleleProto.AlleleKeyOrBuilder
      Returns:
      The bytes for ref.

    • getAlt

      public String getAlt()
      string alt = 4;
      Specified by:
      getAlt in interface AlleleProto.AlleleKeyOrBuilder
      Returns:
      The alt.

    • getAltBytes

      public com.google.protobuf.ByteString getAltBytes()
      string alt = 4;
      Specified by:
      getAltBytes in interface AlleleProto.AlleleKeyOrBuilder
      Returns:
      The bytes for alt.

    • isInitialized

      public final boolean isInitialized()
      Specified by:
      isInitialized in interface com.google.protobuf.MessageLiteOrBuilder
      Overrides:
      isInitialized in class com.google.protobuf.GeneratedMessageV3

    • writeTo

      public void writeTo(com.google.protobuf.CodedOutputStream output) throws IOException
      Specified by:
      writeTo in interface com.google.protobuf.MessageLite
      Overrides:
      writeTo in class com.google.protobuf.GeneratedMessageV3
      Throws:
      IOException

    • getSerializedSize

      public int getSerializedSize()
      Specified by:
      getSerializedSize in interface com.google.protobuf.MessageLite
      Overrides:
      getSerializedSize in class com.google.protobuf.GeneratedMessageV3

    • equals

      public boolean equals(Object obj)
      Specified by:
      equals in interface com.google.protobuf.Message
      Overrides:
      equals in class com.google.protobuf.AbstractMessage

    • hashCode

      public int hashCode()
      Specified by:
      hashCode in interface com.google.protobuf.Message
      Overrides:
      hashCode in class com.google.protobuf.AbstractMessage

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(ByteBuffer data) throws com.google.protobuf.InvalidProtocolBufferException
      Throws:
      com.google.protobuf.InvalidProtocolBufferException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(ByteBuffer data, com.google.protobuf.ExtensionRegistryLite extensionRegistry) throws com.google.protobuf.InvalidProtocolBufferException
      Throws:
      com.google.protobuf.InvalidProtocolBufferException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(com.google.protobuf.ByteString data) throws com.google.protobuf.InvalidProtocolBufferException
      Throws:
      com.google.protobuf.InvalidProtocolBufferException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(com.google.protobuf.ByteString data, com.google.protobuf.ExtensionRegistryLite extensionRegistry) throws com.google.protobuf.InvalidProtocolBufferException
      Throws:
      com.google.protobuf.InvalidProtocolBufferException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(byte[] data) throws com.google.protobuf.InvalidProtocolBufferException
      Throws:
      com.google.protobuf.InvalidProtocolBufferException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(byte[] data, com.google.protobuf.ExtensionRegistryLite extensionRegistry) throws com.google.protobuf.InvalidProtocolBufferException
      Throws:
      com.google.protobuf.InvalidProtocolBufferException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(InputStream input) throws IOException
      Throws:
      IOException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry) throws IOException
      Throws:
      IOException

    • parseDelimitedFrom

      public static AlleleProto.AlleleKey parseDelimitedFrom(InputStream input) throws IOException
      Throws:
      IOException

    • parseDelimitedFrom

      public static AlleleProto.AlleleKey parseDelimitedFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry) throws IOException
      Throws:
      IOException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(com.google.protobuf.CodedInputStream input) throws IOException
      Throws:
      IOException

    • parseFrom

      public static AlleleProto.AlleleKey parseFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry) throws IOException
      Throws:
      IOException

    • newBuilderForType

      public AlleleProto.AlleleKey.Builder newBuilderForType()
      Specified by:
      newBuilderForType in interface com.google.protobuf.Message
      Specified by:
      newBuilderForType in interface com.google.protobuf.MessageLite

    • newBuilder

      public static AlleleProto.AlleleKey.Builder newBuilder()

    • newBuilder

      public static AlleleProto.AlleleKey.Builder newBuilder(AlleleProto.AlleleKey prototype)

    • toBuilder

      public AlleleProto.AlleleKey.Builder toBuilder()
      Specified by:
      toBuilder in interface com.google.protobuf.Message
      Specified by:
      toBuilder in interface com.google.protobuf.MessageLite

    • newBuilderForType

      protected AlleleProto.AlleleKey.Builder newBuilderForType(com.google.protobuf.GeneratedMessageV3.BuilderParent parent)
      Specified by:
      newBuilderForType in class com.google.protobuf.GeneratedMessageV3

    • getDefaultInstance

      public static AlleleProto.AlleleKey getDefaultInstance()

    • parser

      public static com.google.protobuf.Parser<AlleleProto.AlleleKey> parser()

    • getParserForType

      public com.google.protobuf.Parser<AlleleProto.AlleleKey> getParserForType()
      Specified by:
      getParserForType in interface com.google.protobuf.Message
      Specified by:
      getParserForType in interface com.google.protobuf.MessageLite
      Overrides:
      getParserForType in class com.google.protobuf.GeneratedMessageV3

    • getDefaultInstanceForType

      public AlleleProto.AlleleKey getDefaultInstanceForType()
      Specified by:
      getDefaultInstanceForType in interface com.google.protobuf.MessageLiteOrBuilder
      Specified by:
      getDefaultInstanceForType in interface com.google.protobuf.MessageOrBuilder