Package org.monarchinitiative.exomiser.core.proto

Interface AlleleProto.AllelePropertiesOrBuilder

All Superinterfaces:
com.google.protobuf.MessageLiteOrBuilder, com.google.protobuf.MessageOrBuilder
All Known Implementing Classes:
AlleleProto.AlleleProperties, AlleleProto.AlleleProperties.Builder
Enclosing class:
AlleleProto
public static interface AlleleProto.AllelePropertiesOrBuilder extends com.google.protobuf.MessageOrBuilder

  • Method Summary

    Modifier and Type
    Method
    Description
    boolean
    containsProperties(String key)
    map<string, float> properties = 2;
    AlleleProto.ClinVar
    getClinVar()
    TODO: move to model or somewhere and then import here - this is also needed for output in results
    AlleleProto.ClinVarOrBuilder
    getClinVarOrBuilder()
    TODO: move to model or somewhere and then import here - this is also needed for output in results
    Map<String,Float>
    getProperties()
    Deprecated.
    int
    getPropertiesCount()
    map<string, float> properties = 2;
    Map<String,Float>
    getPropertiesMap()
    map<string, float> properties = 2;
    float
    getPropertiesOrDefault(String key, float defaultValue)
    map<string, float> properties = 2;
    float
    getPropertiesOrThrow(String key)
    map<string, float> properties = 2;
    String
    getRsId()
    string rs_id = 1;
    com.google.protobuf.ByteString
    getRsIdBytes()
    string rs_id = 1;
    boolean
    hasClinVar()
    TODO: move to model or somewhere and then import here - this is also needed for output in results

    Methods inherited from interface com.google.protobuf.MessageLiteOrBuilder

    isInitialized

    Methods inherited from interface com.google.protobuf.MessageOrBuilder

    findInitializationErrors, getAllFields, getDefaultInstanceForType, getDescriptorForType, getField, getInitializationErrorString, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof

  • Method Details

    • getRsId

      String getRsId()
      string rs_id = 1;
      Returns:
      The rsId.

    • getRsIdBytes

      com.google.protobuf.ByteString getRsIdBytes()
      string rs_id = 1;
      Returns:
      The bytes for rsId.

    • getPropertiesCount

      int getPropertiesCount()
      map<string, float> properties = 2;

    • containsProperties

      boolean containsProperties(String key)
      map<string, float> properties = 2;

    • getProperties

      @Deprecated Map<String,Float> getProperties()
      Deprecated.
      Use getPropertiesMap() instead.

    • getPropertiesMap

      Map<String,Float> getPropertiesMap()
      map<string, float> properties = 2;

    • getPropertiesOrDefault

      float getPropertiesOrDefault(String key, float defaultValue)
      map<string, float> properties = 2;

    • getPropertiesOrThrow

      float getPropertiesOrThrow(String key)
      map<string, float> properties = 2;

    • hasClinVar

      boolean hasClinVar()
      TODO: move to model or somewhere and then import here - this is also needed for output in results
      .ClinVar clinVar = 3;
      Returns:
      Whether the clinVar field is set.

    • getClinVar

      AlleleProto.ClinVar getClinVar()
      TODO: move to model or somewhere and then import here - this is also needed for output in results
      .ClinVar clinVar = 3;
      Returns:
      The clinVar.

    • getClinVarOrBuilder

      AlleleProto.ClinVarOrBuilder getClinVarOrBuilder()
      TODO: move to model or somewhere and then import here - this is also needed for output in results
      .ClinVar clinVar = 3;