Package org.monarchinitiative.exomiser.core.proto

Interface AlleleProto.AllelePropertiesOrBuilder

All Superinterfaces:
com.google.protobuf.MessageLiteOrBuilder, com.google.protobuf.MessageOrBuilder
All Known Implementing Classes:
AlleleProto.AlleleProperties, AlleleProto.AlleleProperties.Builder
Enclosing class:
AlleleProto
public static interface AlleleProto.AllelePropertiesOrBuilder extends com.google.protobuf.MessageOrBuilder

  • Method Details

    • getRsId

      String getRsId()
      string rs_id = 1;
      Returns:
      The rsId.

    • getRsIdBytes

      com.google.protobuf.ByteString getRsIdBytes()
      string rs_id = 1;
      Returns:
      The bytes for rsId.

    • getPropertiesCount

      @Deprecated int getPropertiesCount()
      Deprecated.
      map<string, float> properties = 2 [deprecated = true];

    • containsProperties

      @Deprecated boolean containsProperties(String key)
      Deprecated.
      map<string, float> properties = 2 [deprecated = true];

    • getProperties

      @Deprecated Map<String,Float> getProperties()
      Deprecated.
      Use getPropertiesMap() instead.

    • getPropertiesMap

      @Deprecated Map<String,Float> getPropertiesMap()
      Deprecated.
      map<string, float> properties = 2 [deprecated = true];

    • getPropertiesOrDefault

      @Deprecated float getPropertiesOrDefault(String key, float defaultValue)
      Deprecated.
      map<string, float> properties = 2 [deprecated = true];

    • getPropertiesOrThrow

      @Deprecated float getPropertiesOrThrow(String key)
      Deprecated.
      map<string, float> properties = 2 [deprecated = true];

    • hasClinVar

      boolean hasClinVar()
      .ClinVar clinVar = 3;
      Returns:
      Whether the clinVar field is set.

    • getClinVar

      AlleleProto.ClinVar getClinVar()
      .ClinVar clinVar = 3;
      Returns:
      The clinVar.

    • getClinVarOrBuilder

      AlleleProto.ClinVarOrBuilder getClinVarOrBuilder()
      .ClinVar clinVar = 3;

    • getFrequenciesList

      List<AlleleProto.Frequency> getFrequenciesList()
      repeated .Frequency frequencies = 4;

    • getFrequencies

      AlleleProto.Frequency getFrequencies(int index)
      repeated .Frequency frequencies = 4;

    • getFrequenciesCount

      int getFrequenciesCount()
      repeated .Frequency frequencies = 4;

    • getFrequenciesOrBuilderList

      List<? extends AlleleProto.FrequencyOrBuilder> getFrequenciesOrBuilderList()
      repeated .Frequency frequencies = 4;

    • getFrequenciesOrBuilder

      AlleleProto.FrequencyOrBuilder getFrequenciesOrBuilder(int index)
      repeated .Frequency frequencies = 4;

    • getPathogenicityScoresList

      List<AlleleProto.PathogenicityScore> getPathogenicityScoresList()
      repeated .PathogenicityScore pathogenicityScores = 5;

    • getPathogenicityScores

      AlleleProto.PathogenicityScore getPathogenicityScores(int index)
      repeated .PathogenicityScore pathogenicityScores = 5;

    • getPathogenicityScoresCount

      int getPathogenicityScoresCount()
      repeated .PathogenicityScore pathogenicityScores = 5;

    • getPathogenicityScoresOrBuilderList

      List<? extends AlleleProto.PathogenicityScoreOrBuilder> getPathogenicityScoresOrBuilderList()
      repeated .PathogenicityScore pathogenicityScores = 5;

    • getPathogenicityScoresOrBuilder

      AlleleProto.PathogenicityScoreOrBuilder getPathogenicityScoresOrBuilder(int index)
      repeated .PathogenicityScore pathogenicityScores = 5;