Uses of Class
org.monarchinitiative.exomiser.core.proto.AlleleProto.ClinVar.Builder

Packages that use AlleleProto.ClinVar.Builder

Package	Description
org.monarchinitiative.exomiser.core.proto

Uses of AlleleProto.ClinVar.Builder in org.monarchinitiative.exomiser.core.proto

Methods in org.monarchinitiative.exomiser.core.proto that return AlleleProto.ClinVar.Builder

Modifier and Type	Method	Description
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.addAllSecondaryInterpretations(Iterable<? extends AlleleProto.ClinVar.ClinSig> values)	repeated .ClinVar.ClinSig secondaryInterpretations = 3;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.addAllSecondaryInterpretationsValue(Iterable<Integer> values)	repeated .ClinVar.ClinSig secondaryInterpretations = 3;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.addRepeatedField(com.google.protobuf.Descriptors.FieldDescriptor field, Object value)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.addSecondaryInterpretations(AlleleProto.ClinVar.ClinSig value)	repeated .ClinVar.ClinSig secondaryInterpretations = 3;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.addSecondaryInterpretationsValue(int value)	repeated .ClinVar.ClinSig secondaryInterpretations = 3;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clear()
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clearAlleleId()	string alleleId = 1;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clearField(com.google.protobuf.Descriptors.FieldDescriptor field)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clearIncludedAlleles()
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clearOneof(com.google.protobuf.Descriptors.OneofDescriptor oneof)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clearPrimaryInterpretation()	.ClinVar.ClinSig primaryInterpretation = 2;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clearReviewStatus()	string reviewStatus = 4;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clearSecondaryInterpretations()	repeated .ClinVar.ClinSig secondaryInterpretations = 3;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.clone()
AlleleProto.ClinVar.Builder	AlleleProto.AlleleProperties.Builder.getClinVarBuilder()	TODO: move to model or somewhere and then import here - this is also needed for output in results
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.mergeFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.mergeFrom(com.google.protobuf.Message other)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.mergeFrom(AlleleProto.ClinVar other)
final AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.mergeUnknownFields(com.google.protobuf.UnknownFieldSet unknownFields)
static AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.newBuilder()
static AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.newBuilder(AlleleProto.ClinVar prototype)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.newBuilderForType()
protected AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.newBuilderForType(com.google.protobuf.GeneratedMessageV3.BuilderParent parent)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.putAllIncludedAlleles(Map<String,AlleleProto.ClinVar.ClinSig> values)	map<string, .ClinVar.ClinSig> includedAlleles = 5;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.putAllIncludedAllelesValue(Map<String,Integer> values)	map<string, .ClinVar.ClinSig> includedAlleles = 5;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.putIncludedAlleles(String key, AlleleProto.ClinVar.ClinSig value)	map<string, .ClinVar.ClinSig> includedAlleles = 5;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.putIncludedAllelesValue(String key, int value)	map<string, .ClinVar.ClinSig> includedAlleles = 5;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.removeIncludedAlleles(String key)	map<string, .ClinVar.ClinSig> includedAlleles = 5;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setAlleleId(String value)	string alleleId = 1;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setAlleleIdBytes(com.google.protobuf.ByteString value)	string alleleId = 1;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setField(com.google.protobuf.Descriptors.FieldDescriptor field, Object value)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setPrimaryInterpretation(AlleleProto.ClinVar.ClinSig value)	.ClinVar.ClinSig primaryInterpretation = 2;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setPrimaryInterpretationValue(int value)	.ClinVar.ClinSig primaryInterpretation = 2;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setRepeatedField(com.google.protobuf.Descriptors.FieldDescriptor field, int index, Object value)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setReviewStatus(String value)	string reviewStatus = 4;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setReviewStatusBytes(com.google.protobuf.ByteString value)	string reviewStatus = 4;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setSecondaryInterpretations(int index, AlleleProto.ClinVar.ClinSig value)	repeated .ClinVar.ClinSig secondaryInterpretations = 3;
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setSecondaryInterpretationsValue(int index, int value)	repeated .ClinVar.ClinSig secondaryInterpretations = 3;
final AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.Builder.setUnknownFields(com.google.protobuf.UnknownFieldSet unknownFields)
AlleleProto.ClinVar.Builder	AlleleProto.ClinVar.toBuilder()

Methods in org.monarchinitiative.exomiser.core.proto with parameters of type AlleleProto.ClinVar.Builder

Modifier and Type	Method	Description
AlleleProto.AlleleProperties.Builder	AlleleProto.AlleleProperties.Builder.setClinVar(AlleleProto.ClinVar.Builder builderForValue)	TODO: move to model or somewhere and then import here - this is also needed for output in results